Multiple sequence alignment - TraesCS3D01G382500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G382500 chr3D 100.000 3421 0 0 1 3421 498208601 498205181 0.000000e+00 6318
1 TraesCS3D01G382500 chr3D 83.841 1838 225 31 672 2471 606299461 606301264 0.000000e+00 1683
2 TraesCS3D01G382500 chr3D 84.906 1325 162 22 1340 2655 519354386 519355681 0.000000e+00 1304
3 TraesCS3D01G382500 chr3D 87.559 1053 123 5 1356 2408 519335502 519336546 0.000000e+00 1212
4 TraesCS3D01G382500 chr3D 90.071 141 14 0 1261 1401 519365248 519365388 2.100000e-42 183
5 TraesCS3D01G382500 chr3A 93.729 2727 113 24 143 2835 638335487 638332785 0.000000e+00 4036
6 TraesCS3D01G382500 chr3A 83.379 1835 238 26 672 2471 737970089 737968287 0.000000e+00 1637
7 TraesCS3D01G382500 chr3A 92.562 121 9 0 1 121 638335600 638335480 1.260000e-39 174
8 TraesCS3D01G382500 chr3A 84.615 117 14 4 2926 3039 638389838 638389723 2.790000e-21 113
9 TraesCS3D01G382500 chr3A 92.308 78 6 0 3344 3421 638332787 638332710 1.000000e-20 111
10 TraesCS3D01G382500 chr3B 91.905 2730 142 36 158 2835 659082013 659079311 0.000000e+00 3744
11 TraesCS3D01G382500 chr3B 84.185 1840 218 38 672 2471 815873078 815871272 0.000000e+00 1718
12 TraesCS3D01G382500 chr3B 85.381 1327 155 21 1340 2655 683759975 683761273 0.000000e+00 1339
13 TraesCS3D01G382500 chr3B 84.981 1325 162 19 1340 2655 684096977 684098273 0.000000e+00 1310
14 TraesCS3D01G382500 chr3B 95.122 123 6 0 1 123 659082136 659082014 9.690000e-46 195


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G382500 chr3D 498205181 498208601 3420 True 6318.000000 6318 100.000000 1 3421 1 chr3D.!!$R1 3420
1 TraesCS3D01G382500 chr3D 606299461 606301264 1803 False 1683.000000 1683 83.841000 672 2471 1 chr3D.!!$F4 1799
2 TraesCS3D01G382500 chr3D 519354386 519355681 1295 False 1304.000000 1304 84.906000 1340 2655 1 chr3D.!!$F2 1315
3 TraesCS3D01G382500 chr3D 519335502 519336546 1044 False 1212.000000 1212 87.559000 1356 2408 1 chr3D.!!$F1 1052
4 TraesCS3D01G382500 chr3A 737968287 737970089 1802 True 1637.000000 1637 83.379000 672 2471 1 chr3A.!!$R2 1799
5 TraesCS3D01G382500 chr3A 638332710 638335600 2890 True 1440.333333 4036 92.866333 1 3421 3 chr3A.!!$R3 3420
6 TraesCS3D01G382500 chr3B 659079311 659082136 2825 True 1969.500000 3744 93.513500 1 2835 2 chr3B.!!$R2 2834
7 TraesCS3D01G382500 chr3B 815871272 815873078 1806 True 1718.000000 1718 84.185000 672 2471 1 chr3B.!!$R1 1799
8 TraesCS3D01G382500 chr3B 683759975 683761273 1298 False 1339.000000 1339 85.381000 1340 2655 1 chr3B.!!$F1 1315
9 TraesCS3D01G382500 chr3B 684096977 684098273 1296 False 1310.000000 1310 84.981000 1340 2655 1 chr3B.!!$F2 1315

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
67 68 0.322816 TCTGGAGGCAGCCACATTTC 60.323 55.0 15.80 0.95 33.52 2.17 F
1223 1281 1.308998 CTTGGTGGGAAGTGTGACAC 58.691 55.0 7.83 7.83 34.10 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1301 1359 0.036858 GGCAGAAGAGACCGAAAGCT 60.037 55.0 0.0 0.0 0.0 3.74 R
3084 3193 0.036732 ATCTCTTGCAGCCAACCGAA 59.963 50.0 0.0 0.0 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.603024 CAGGGGATTTACTTTATAGATCGGTTC 59.397 40.741 0.00 0.00 0.00 3.62
67 68 0.322816 TCTGGAGGCAGCCACATTTC 60.323 55.000 15.80 0.95 33.52 2.17
123 124 7.170658 GGAGCTCATCAACAATCTTAGATACAC 59.829 40.741 17.19 0.00 0.00 2.90
124 125 7.790027 AGCTCATCAACAATCTTAGATACACT 58.210 34.615 0.00 0.00 0.00 3.55
125 126 7.925483 AGCTCATCAACAATCTTAGATACACTC 59.075 37.037 0.00 0.00 0.00 3.51
126 127 7.925483 GCTCATCAACAATCTTAGATACACTCT 59.075 37.037 0.00 0.00 38.06 3.24
127 128 9.462174 CTCATCAACAATCTTAGATACACTCTC 57.538 37.037 0.00 0.00 35.28 3.20
128 129 8.131731 TCATCAACAATCTTAGATACACTCTCG 58.868 37.037 0.00 0.00 35.28 4.04
129 130 6.266323 TCAACAATCTTAGATACACTCTCGC 58.734 40.000 0.00 0.00 35.28 5.03
130 131 5.836821 ACAATCTTAGATACACTCTCGCA 57.163 39.130 0.00 0.00 35.28 5.10
131 132 6.208988 ACAATCTTAGATACACTCTCGCAA 57.791 37.500 0.00 0.00 35.28 4.85
132 133 6.631016 ACAATCTTAGATACACTCTCGCAAA 58.369 36.000 0.00 0.00 35.28 3.68
133 134 7.097192 ACAATCTTAGATACACTCTCGCAAAA 58.903 34.615 0.00 0.00 35.28 2.44
134 135 7.602644 ACAATCTTAGATACACTCTCGCAAAAA 59.397 33.333 0.00 0.00 35.28 1.94
184 185 3.487574 CGTGCACGCCTTTTAATTGAAAA 59.512 39.130 28.16 0.00 35.67 2.29
263 267 3.450115 GTAGACGCCTGGACGCCT 61.450 66.667 0.00 0.94 36.19 5.52
288 293 6.150307 TGCATTCACCGTGATATAAAAACTGT 59.850 34.615 1.09 0.00 0.00 3.55
313 318 1.512734 GCTTTCATGCGCCGTGAAG 60.513 57.895 20.06 16.10 39.95 3.02
405 410 6.978343 TGATTACATTCTTAACTGAACCGG 57.022 37.500 0.00 0.00 0.00 5.28
411 416 1.418637 TCTTAACTGAACCGGGCAACT 59.581 47.619 6.32 0.00 0.00 3.16
547 570 2.124736 TACGCATTCCTGCCCTGC 60.125 61.111 0.00 0.00 46.07 4.85
622 645 1.818221 GCGTGGCGTCGATGATTACC 61.818 60.000 9.31 0.00 0.00 2.85
639 662 7.027874 TGATTACCTCTTAATTGAACTGGGT 57.972 36.000 0.00 0.00 29.85 4.51
827 855 2.158623 TCAAGATTTGAGCACCACAGGT 60.159 45.455 0.00 0.00 34.08 4.00
896 924 1.492993 GGTCCCCAGAAGCTGACCTT 61.493 60.000 10.60 0.00 43.16 3.50
902 930 5.307196 GTCCCCAGAAGCTGACCTTTATATA 59.693 44.000 0.00 0.00 32.78 0.86
1157 1215 2.754472 TGACAGTGATTCACAGGTTCG 58.246 47.619 18.57 2.93 36.74 3.95
1208 1266 1.760613 TCCTAATACCGGTCAGCTTGG 59.239 52.381 12.40 7.69 0.00 3.61
1213 1271 3.636231 CCGGTCAGCTTGGTGGGA 61.636 66.667 0.00 0.00 0.00 4.37
1223 1281 1.308998 CTTGGTGGGAAGTGTGACAC 58.691 55.000 7.83 7.83 34.10 3.67
1239 1297 3.376234 GTGACACTGACAATGGGATGATG 59.624 47.826 0.00 0.00 0.00 3.07
1308 1366 2.815647 GCTGACCGGGAGCTTTCG 60.816 66.667 18.04 0.00 33.37 3.46
1536 1594 2.170187 AGGTCAGAGATCAGCAACATCC 59.830 50.000 0.00 0.00 0.00 3.51
1545 1603 1.204704 TCAGCAACATCCGAGATTCGT 59.795 47.619 0.00 0.00 38.40 3.85
1581 1640 3.822735 ACAACATGGAGAACAGGATTGTG 59.177 43.478 0.00 0.00 37.67 3.33
1860 1919 1.872679 CGCCGTAAAGCCTCTCGTC 60.873 63.158 0.00 0.00 0.00 4.20
1864 1923 0.522915 CGTAAAGCCTCTCGTCGACC 60.523 60.000 10.58 0.00 0.00 4.79
2307 2370 7.981142 TCACTTCCTACAACAAACTTTACAAG 58.019 34.615 0.00 0.00 0.00 3.16
2365 2434 2.877582 GAATTTGCTGCAGGCGCG 60.878 61.111 17.12 0.00 45.43 6.86
2441 2518 9.498039 AGATGATGATGATGGTCCTACAATATA 57.502 33.333 0.00 0.00 0.00 0.86
2527 2624 2.881074 CGCTGTGTACTGCTTAGTCAT 58.119 47.619 11.26 0.00 38.46 3.06
2560 2658 3.703052 TGCTCATCATCTCAAGCTACTGA 59.297 43.478 0.00 0.00 35.76 3.41
2570 2668 7.725844 TCATCTCAAGCTACTGATGGATTAGTA 59.274 37.037 17.15 0.00 37.48 1.82
2583 2689 5.554437 TGGATTAGTAGGTGTGTTTGTGA 57.446 39.130 0.00 0.00 0.00 3.58
2590 2696 0.299597 GGTGTGTTTGTGACGTCGTC 59.700 55.000 18.51 18.51 0.00 4.20
2612 2719 6.077838 GTCGTTGTTGAGATGGTGTATTTTC 58.922 40.000 0.00 0.00 0.00 2.29
2663 2772 9.421399 TCTATTGGTATCTGTTTCACTGAGATA 57.579 33.333 0.00 0.00 29.63 1.98
2664 2773 9.689976 CTATTGGTATCTGTTTCACTGAGATAG 57.310 37.037 0.00 0.00 30.96 2.08
2666 2775 8.589701 TTGGTATCTGTTTCACTGAGATAGTA 57.410 34.615 0.00 0.00 37.60 1.82
2710 2819 6.397272 TGATTCAAACAGTGATTTATTGCCC 58.603 36.000 0.00 0.00 35.70 5.36
2715 2824 2.760092 ACAGTGATTTATTGCCCGCATT 59.240 40.909 0.00 0.00 0.00 3.56
2721 2830 3.518634 TTTATTGCCCGCATTCTTTCC 57.481 42.857 0.00 0.00 0.00 3.13
2770 2879 0.879400 CGCTCTGATGTGCCTGATCC 60.879 60.000 0.00 0.00 0.00 3.36
2794 2903 3.203442 CGTAGGTTAGGGCAGCGA 58.797 61.111 0.00 0.00 0.00 4.93
2803 2912 0.464036 TAGGGCAGCGAATGTACTGG 59.536 55.000 0.00 0.00 34.38 4.00
2844 2953 8.179148 CTGAAATCAGTAGTTACAAGCTACAG 57.821 38.462 2.18 0.00 40.76 2.74
2845 2954 7.097192 TGAAATCAGTAGTTACAAGCTACAGG 58.903 38.462 4.16 0.00 40.76 4.00
2846 2955 6.852420 AATCAGTAGTTACAAGCTACAGGA 57.148 37.500 4.16 2.13 40.76 3.86
2847 2956 5.899120 TCAGTAGTTACAAGCTACAGGAG 57.101 43.478 4.16 0.00 40.76 3.69
2855 2964 4.254721 GCTACAGGAGCGGACCTA 57.745 61.111 0.00 0.00 42.62 3.08
2856 2965 2.034607 GCTACAGGAGCGGACCTAG 58.965 63.158 0.00 0.00 42.62 3.02
2857 2966 2.034607 CTACAGGAGCGGACCTAGC 58.965 63.158 0.00 0.00 38.32 3.42
2863 2972 4.443934 AGCGGACCTAGCTCAACT 57.556 55.556 0.00 0.00 41.83 3.16
2864 2973 2.194460 AGCGGACCTAGCTCAACTC 58.806 57.895 0.00 0.00 41.83 3.01
2865 2974 0.612174 AGCGGACCTAGCTCAACTCA 60.612 55.000 0.00 0.00 41.83 3.41
2866 2975 0.246635 GCGGACCTAGCTCAACTCAA 59.753 55.000 0.00 0.00 0.00 3.02
2867 2976 1.997669 CGGACCTAGCTCAACTCAAC 58.002 55.000 0.00 0.00 0.00 3.18
2868 2977 1.272490 CGGACCTAGCTCAACTCAACA 59.728 52.381 0.00 0.00 0.00 3.33
2869 2978 2.093973 CGGACCTAGCTCAACTCAACAT 60.094 50.000 0.00 0.00 0.00 2.71
2870 2979 3.265791 GGACCTAGCTCAACTCAACATG 58.734 50.000 0.00 0.00 0.00 3.21
2871 2980 3.265791 GACCTAGCTCAACTCAACATGG 58.734 50.000 0.00 0.00 0.00 3.66
2872 2981 2.639839 ACCTAGCTCAACTCAACATGGT 59.360 45.455 0.00 0.00 0.00 3.55
2873 2982 3.005554 CCTAGCTCAACTCAACATGGTG 58.994 50.000 3.69 3.69 0.00 4.17
2874 2983 1.901591 AGCTCAACTCAACATGGTGG 58.098 50.000 11.68 4.22 0.00 4.61
2875 2984 0.883833 GCTCAACTCAACATGGTGGG 59.116 55.000 9.73 9.73 0.00 4.61
2876 2985 1.819305 GCTCAACTCAACATGGTGGGT 60.819 52.381 11.51 11.51 31.91 4.51
2877 2986 2.586425 CTCAACTCAACATGGTGGGTT 58.414 47.619 23.58 23.58 43.12 4.11
2878 2987 2.958355 CTCAACTCAACATGGTGGGTTT 59.042 45.455 26.53 9.35 39.20 3.27
2879 2988 3.370104 TCAACTCAACATGGTGGGTTTT 58.630 40.909 26.53 3.83 39.20 2.43
2880 2989 3.131933 TCAACTCAACATGGTGGGTTTTG 59.868 43.478 26.53 17.23 39.20 2.44
2881 2990 2.745968 ACTCAACATGGTGGGTTTTGT 58.254 42.857 11.51 0.00 0.00 2.83
2882 2991 2.430332 ACTCAACATGGTGGGTTTTGTG 59.570 45.455 11.51 0.59 0.00 3.33
2883 2992 2.692557 CTCAACATGGTGGGTTTTGTGA 59.307 45.455 11.68 0.00 0.00 3.58
2884 2993 3.303938 TCAACATGGTGGGTTTTGTGAT 58.696 40.909 11.68 0.00 0.00 3.06
2885 2994 3.069300 TCAACATGGTGGGTTTTGTGATG 59.931 43.478 11.68 0.00 0.00 3.07
2886 2995 2.956132 ACATGGTGGGTTTTGTGATGA 58.044 42.857 0.00 0.00 0.00 2.92
2887 2996 3.303938 ACATGGTGGGTTTTGTGATGAA 58.696 40.909 0.00 0.00 0.00 2.57
2888 2997 3.708631 ACATGGTGGGTTTTGTGATGAAA 59.291 39.130 0.00 0.00 0.00 2.69
2889 2998 4.347583 ACATGGTGGGTTTTGTGATGAAAT 59.652 37.500 0.00 0.00 0.00 2.17
2890 2999 5.163216 ACATGGTGGGTTTTGTGATGAAATT 60.163 36.000 0.00 0.00 0.00 1.82
2891 3000 4.701765 TGGTGGGTTTTGTGATGAAATTG 58.298 39.130 0.00 0.00 0.00 2.32
2892 3001 4.163078 TGGTGGGTTTTGTGATGAAATTGT 59.837 37.500 0.00 0.00 0.00 2.71
2893 3002 5.122519 GGTGGGTTTTGTGATGAAATTGTT 58.877 37.500 0.00 0.00 0.00 2.83
2894 3003 5.588246 GGTGGGTTTTGTGATGAAATTGTTT 59.412 36.000 0.00 0.00 0.00 2.83
2895 3004 6.763610 GGTGGGTTTTGTGATGAAATTGTTTA 59.236 34.615 0.00 0.00 0.00 2.01
2896 3005 7.254624 GGTGGGTTTTGTGATGAAATTGTTTAC 60.255 37.037 0.00 0.00 0.00 2.01
2897 3006 6.763610 TGGGTTTTGTGATGAAATTGTTTACC 59.236 34.615 0.00 0.00 0.00 2.85
2898 3007 6.763610 GGGTTTTGTGATGAAATTGTTTACCA 59.236 34.615 0.00 0.00 0.00 3.25
2899 3008 7.254624 GGGTTTTGTGATGAAATTGTTTACCAC 60.255 37.037 0.00 0.00 0.00 4.16
2900 3009 7.278868 GGTTTTGTGATGAAATTGTTTACCACA 59.721 33.333 0.00 0.00 0.00 4.17
2901 3010 8.825745 GTTTTGTGATGAAATTGTTTACCACAT 58.174 29.630 0.00 0.00 34.43 3.21
2902 3011 8.954950 TTTGTGATGAAATTGTTTACCACATT 57.045 26.923 0.00 0.00 34.43 2.71
2905 3014 9.636879 TGTGATGAAATTGTTTACCACATTATG 57.363 29.630 0.00 0.00 34.43 1.90
2906 3015 8.594687 GTGATGAAATTGTTTACCACATTATGC 58.405 33.333 0.00 0.00 34.43 3.14
2907 3016 8.309656 TGATGAAATTGTTTACCACATTATGCA 58.690 29.630 0.00 0.00 34.43 3.96
2908 3017 9.149225 GATGAAATTGTTTACCACATTATGCAA 57.851 29.630 0.00 0.00 34.43 4.08
2909 3018 8.893219 TGAAATTGTTTACCACATTATGCAAA 57.107 26.923 0.00 0.00 34.43 3.68
2910 3019 9.330063 TGAAATTGTTTACCACATTATGCAAAA 57.670 25.926 0.00 0.00 34.43 2.44
2913 3022 9.499479 AATTGTTTACCACATTATGCAAAATGA 57.501 25.926 0.00 0.00 38.84 2.57
2914 3023 8.893219 TTGTTTACCACATTATGCAAAATGAA 57.107 26.923 0.00 0.00 38.84 2.57
2915 3024 8.893219 TGTTTACCACATTATGCAAAATGAAA 57.107 26.923 0.00 0.00 38.84 2.69
2916 3025 9.499479 TGTTTACCACATTATGCAAAATGAAAT 57.501 25.926 0.00 0.00 38.84 2.17
2934 3043 8.961294 AATGAAATTTGTTTCAATCCTTGTGA 57.039 26.923 7.57 0.00 43.28 3.58
2935 3044 9.563748 AATGAAATTTGTTTCAATCCTTGTGAT 57.436 25.926 7.57 0.00 43.28 3.06
2936 3045 8.961294 TGAAATTTGTTTCAATCCTTGTGATT 57.039 26.923 0.00 0.00 44.67 2.57
2952 3061 9.959749 TCCTTGTGATTGTACTAATTGTTTTTC 57.040 29.630 0.00 0.00 0.00 2.29
2953 3062 9.965824 CCTTGTGATTGTACTAATTGTTTTTCT 57.034 29.630 0.00 0.00 0.00 2.52
2982 3091 7.183580 AGAGAAAAAGAAGAGACATGTTTCG 57.816 36.000 10.47 0.00 0.00 3.46
2983 3092 6.763610 AGAGAAAAAGAAGAGACATGTTTCGT 59.236 34.615 10.47 7.60 0.00 3.85
2984 3093 6.719365 AGAAAAAGAAGAGACATGTTTCGTG 58.281 36.000 9.50 0.00 0.00 4.35
2985 3094 6.316390 AGAAAAAGAAGAGACATGTTTCGTGT 59.684 34.615 9.50 2.94 36.19 4.49
2986 3095 5.409643 AAAGAAGAGACATGTTTCGTGTG 57.590 39.130 9.50 0.00 33.38 3.82
2987 3096 4.060038 AGAAGAGACATGTTTCGTGTGT 57.940 40.909 9.50 0.00 33.38 3.72
2988 3097 4.442706 AGAAGAGACATGTTTCGTGTGTT 58.557 39.130 9.50 0.00 33.38 3.32
2989 3098 4.271049 AGAAGAGACATGTTTCGTGTGTTG 59.729 41.667 9.50 0.00 33.38 3.33
2990 3099 2.287915 AGAGACATGTTTCGTGTGTTGC 59.712 45.455 10.47 0.00 33.38 4.17
2991 3100 2.287915 GAGACATGTTTCGTGTGTTGCT 59.712 45.455 0.00 0.00 33.38 3.91
2992 3101 2.032054 AGACATGTTTCGTGTGTTGCTG 59.968 45.455 0.00 0.00 33.38 4.41
2993 3102 1.742831 ACATGTTTCGTGTGTTGCTGT 59.257 42.857 0.00 0.00 31.87 4.40
2994 3103 2.223249 ACATGTTTCGTGTGTTGCTGTC 60.223 45.455 0.00 0.00 31.87 3.51
2995 3104 1.732941 TGTTTCGTGTGTTGCTGTCT 58.267 45.000 0.00 0.00 0.00 3.41
2996 3105 2.894902 TGTTTCGTGTGTTGCTGTCTA 58.105 42.857 0.00 0.00 0.00 2.59
2997 3106 3.462982 TGTTTCGTGTGTTGCTGTCTAT 58.537 40.909 0.00 0.00 0.00 1.98
2998 3107 3.493129 TGTTTCGTGTGTTGCTGTCTATC 59.507 43.478 0.00 0.00 0.00 2.08
2999 3108 3.660501 TTCGTGTGTTGCTGTCTATCT 57.339 42.857 0.00 0.00 0.00 1.98
3000 3109 3.217599 TCGTGTGTTGCTGTCTATCTC 57.782 47.619 0.00 0.00 0.00 2.75
3001 3110 2.556622 TCGTGTGTTGCTGTCTATCTCA 59.443 45.455 0.00 0.00 0.00 3.27
3002 3111 3.193479 TCGTGTGTTGCTGTCTATCTCAT 59.807 43.478 0.00 0.00 0.00 2.90
3003 3112 3.549471 CGTGTGTTGCTGTCTATCTCATC 59.451 47.826 0.00 0.00 0.00 2.92
3004 3113 4.676459 CGTGTGTTGCTGTCTATCTCATCT 60.676 45.833 0.00 0.00 0.00 2.90
3005 3114 4.565962 GTGTGTTGCTGTCTATCTCATCTG 59.434 45.833 0.00 0.00 0.00 2.90
3006 3115 4.118410 GTGTTGCTGTCTATCTCATCTGG 58.882 47.826 0.00 0.00 0.00 3.86
3007 3116 3.771479 TGTTGCTGTCTATCTCATCTGGT 59.229 43.478 0.00 0.00 0.00 4.00
3008 3117 4.223700 TGTTGCTGTCTATCTCATCTGGTT 59.776 41.667 0.00 0.00 0.00 3.67
3009 3118 5.422012 TGTTGCTGTCTATCTCATCTGGTTA 59.578 40.000 0.00 0.00 0.00 2.85
3010 3119 5.781210 TGCTGTCTATCTCATCTGGTTAG 57.219 43.478 0.00 0.00 0.00 2.34
3011 3120 4.038522 TGCTGTCTATCTCATCTGGTTAGC 59.961 45.833 0.00 0.00 0.00 3.09
3012 3121 4.793071 CTGTCTATCTCATCTGGTTAGCG 58.207 47.826 0.00 0.00 0.00 4.26
3013 3122 4.461198 TGTCTATCTCATCTGGTTAGCGA 58.539 43.478 0.00 0.00 0.00 4.93
3014 3123 4.517075 TGTCTATCTCATCTGGTTAGCGAG 59.483 45.833 0.00 0.00 0.00 5.03
3015 3124 4.517453 GTCTATCTCATCTGGTTAGCGAGT 59.483 45.833 0.00 0.00 0.00 4.18
3016 3125 5.009210 GTCTATCTCATCTGGTTAGCGAGTT 59.991 44.000 0.00 0.00 0.00 3.01
3017 3126 6.205076 GTCTATCTCATCTGGTTAGCGAGTTA 59.795 42.308 0.00 0.00 0.00 2.24
3018 3127 4.902443 TCTCATCTGGTTAGCGAGTTAG 57.098 45.455 0.00 0.00 0.00 2.34
3019 3128 4.524053 TCTCATCTGGTTAGCGAGTTAGA 58.476 43.478 0.00 0.00 0.00 2.10
3020 3129 4.335874 TCTCATCTGGTTAGCGAGTTAGAC 59.664 45.833 0.00 0.00 0.00 2.59
3021 3130 3.380637 TCATCTGGTTAGCGAGTTAGACC 59.619 47.826 0.00 0.00 0.00 3.85
3022 3131 2.799017 TCTGGTTAGCGAGTTAGACCA 58.201 47.619 0.00 0.00 38.01 4.02
3023 3132 3.159472 TCTGGTTAGCGAGTTAGACCAA 58.841 45.455 0.00 0.00 39.68 3.67
3024 3133 3.575256 TCTGGTTAGCGAGTTAGACCAAA 59.425 43.478 0.00 0.00 39.68 3.28
3025 3134 3.921677 TGGTTAGCGAGTTAGACCAAAG 58.078 45.455 0.00 0.00 37.44 2.77
3026 3135 3.259902 GGTTAGCGAGTTAGACCAAAGG 58.740 50.000 0.00 0.00 0.00 3.11
3027 3136 3.056322 GGTTAGCGAGTTAGACCAAAGGA 60.056 47.826 0.00 0.00 0.00 3.36
3028 3137 4.382793 GGTTAGCGAGTTAGACCAAAGGAT 60.383 45.833 0.00 0.00 0.00 3.24
3029 3138 3.252974 AGCGAGTTAGACCAAAGGATG 57.747 47.619 0.00 0.00 0.00 3.51
3030 3139 1.666189 GCGAGTTAGACCAAAGGATGC 59.334 52.381 0.00 0.00 0.00 3.91
3031 3140 2.935238 GCGAGTTAGACCAAAGGATGCA 60.935 50.000 0.00 0.00 0.00 3.96
3032 3141 3.334691 CGAGTTAGACCAAAGGATGCAA 58.665 45.455 0.00 0.00 0.00 4.08
3033 3142 3.372206 CGAGTTAGACCAAAGGATGCAAG 59.628 47.826 0.00 0.00 0.00 4.01
3034 3143 4.327680 GAGTTAGACCAAAGGATGCAAGT 58.672 43.478 0.00 0.00 0.00 3.16
3035 3144 4.074970 AGTTAGACCAAAGGATGCAAGTG 58.925 43.478 0.00 0.00 0.00 3.16
3036 3145 1.251251 AGACCAAAGGATGCAAGTGC 58.749 50.000 0.00 0.00 42.50 4.40
3075 3184 3.979789 TGCGGGTGTGCAACTATG 58.020 55.556 0.00 0.00 43.02 2.23
3076 3185 1.072332 TGCGGGTGTGCAACTATGT 59.928 52.632 0.00 0.00 43.02 2.29
3077 3186 1.233950 TGCGGGTGTGCAACTATGTG 61.234 55.000 0.00 0.00 43.02 3.21
3078 3187 1.234615 GCGGGTGTGCAACTATGTGT 61.235 55.000 0.00 0.00 38.04 3.72
3079 3188 1.234821 CGGGTGTGCAACTATGTGTT 58.765 50.000 0.00 0.00 39.92 3.32
3080 3189 2.418692 CGGGTGTGCAACTATGTGTTA 58.581 47.619 0.00 0.00 37.07 2.41
3081 3190 3.006940 CGGGTGTGCAACTATGTGTTAT 58.993 45.455 0.00 0.00 37.07 1.89
3082 3191 3.438781 CGGGTGTGCAACTATGTGTTATT 59.561 43.478 0.00 0.00 37.07 1.40
3083 3192 4.671508 CGGGTGTGCAACTATGTGTTATTG 60.672 45.833 0.00 0.00 37.07 1.90
3084 3193 4.217550 GGGTGTGCAACTATGTGTTATTGT 59.782 41.667 0.00 0.00 37.07 2.71
3085 3194 5.278758 GGGTGTGCAACTATGTGTTATTGTT 60.279 40.000 0.00 0.00 37.07 2.83
3086 3195 5.856455 GGTGTGCAACTATGTGTTATTGTTC 59.144 40.000 0.00 0.00 37.07 3.18
3087 3196 5.563751 GTGTGCAACTATGTGTTATTGTTCG 59.436 40.000 0.00 0.00 37.07 3.95
3088 3197 5.086058 GTGCAACTATGTGTTATTGTTCGG 58.914 41.667 0.00 0.00 37.07 4.30
3089 3198 4.757657 TGCAACTATGTGTTATTGTTCGGT 59.242 37.500 0.00 0.00 37.07 4.69
3090 3199 5.239744 TGCAACTATGTGTTATTGTTCGGTT 59.760 36.000 0.00 0.00 37.07 4.44
3091 3200 5.567534 GCAACTATGTGTTATTGTTCGGTTG 59.432 40.000 0.00 0.00 37.07 3.77
3092 3201 5.873179 ACTATGTGTTATTGTTCGGTTGG 57.127 39.130 0.00 0.00 0.00 3.77
3093 3202 3.569250 ATGTGTTATTGTTCGGTTGGC 57.431 42.857 0.00 0.00 0.00 4.52
3094 3203 2.577700 TGTGTTATTGTTCGGTTGGCT 58.422 42.857 0.00 0.00 0.00 4.75
3095 3204 2.292016 TGTGTTATTGTTCGGTTGGCTG 59.708 45.455 0.00 0.00 0.00 4.85
3096 3205 1.268352 TGTTATTGTTCGGTTGGCTGC 59.732 47.619 0.00 0.00 0.00 5.25
3097 3206 1.268352 GTTATTGTTCGGTTGGCTGCA 59.732 47.619 0.50 0.00 0.00 4.41
3098 3207 1.610363 TATTGTTCGGTTGGCTGCAA 58.390 45.000 0.50 0.00 0.00 4.08
3099 3208 0.314935 ATTGTTCGGTTGGCTGCAAG 59.685 50.000 0.50 0.00 0.00 4.01
3100 3209 0.749818 TTGTTCGGTTGGCTGCAAGA 60.750 50.000 0.50 0.00 34.07 3.02
3101 3210 1.165907 TGTTCGGTTGGCTGCAAGAG 61.166 55.000 0.50 0.00 34.07 2.85
3102 3211 0.884704 GTTCGGTTGGCTGCAAGAGA 60.885 55.000 0.50 0.00 34.07 3.10
3103 3212 0.036732 TTCGGTTGGCTGCAAGAGAT 59.963 50.000 0.50 0.00 34.07 2.75
3104 3213 0.036732 TCGGTTGGCTGCAAGAGATT 59.963 50.000 0.50 0.00 34.07 2.40
3105 3214 0.169672 CGGTTGGCTGCAAGAGATTG 59.830 55.000 0.50 0.00 34.07 2.67
3115 3224 2.537401 GCAAGAGATTGCATCCAAAGC 58.463 47.619 8.03 0.00 46.60 3.51
3116 3225 2.094390 GCAAGAGATTGCATCCAAAGCA 60.094 45.455 8.03 0.00 46.60 3.91
3117 3226 3.430374 GCAAGAGATTGCATCCAAAGCAT 60.430 43.478 8.03 0.00 46.60 3.79
3118 3227 4.755411 CAAGAGATTGCATCCAAAGCATT 58.245 39.130 0.00 0.00 42.33 3.56
3119 3228 4.650754 AGAGATTGCATCCAAAGCATTC 57.349 40.909 0.00 0.00 42.33 2.67
3121 3230 4.098044 AGAGATTGCATCCAAAGCATTCTG 59.902 41.667 14.79 0.00 46.60 3.02
3122 3231 3.132289 AGATTGCATCCAAAGCATTCTGG 59.868 43.478 10.60 0.00 45.57 3.86
3123 3232 1.927487 TGCATCCAAAGCATTCTGGT 58.073 45.000 0.00 0.00 37.02 4.00
3124 3233 3.084536 TGCATCCAAAGCATTCTGGTA 57.915 42.857 0.00 0.00 37.02 3.25
3125 3234 3.018856 TGCATCCAAAGCATTCTGGTAG 58.981 45.455 0.00 0.00 37.02 3.18
3126 3235 3.282021 GCATCCAAAGCATTCTGGTAGA 58.718 45.455 0.00 0.00 34.11 2.59
3127 3236 3.065925 GCATCCAAAGCATTCTGGTAGAC 59.934 47.826 0.00 0.00 34.11 2.59
3128 3237 4.521146 CATCCAAAGCATTCTGGTAGACT 58.479 43.478 0.00 0.00 34.11 3.24
3129 3238 5.674525 CATCCAAAGCATTCTGGTAGACTA 58.325 41.667 0.00 0.00 34.11 2.59
3130 3239 5.957771 TCCAAAGCATTCTGGTAGACTAT 57.042 39.130 0.00 0.00 34.11 2.12
3131 3240 5.674525 TCCAAAGCATTCTGGTAGACTATG 58.325 41.667 0.00 0.00 34.11 2.23
3132 3241 5.425217 TCCAAAGCATTCTGGTAGACTATGA 59.575 40.000 0.00 0.00 34.11 2.15
3133 3242 5.757320 CCAAAGCATTCTGGTAGACTATGAG 59.243 44.000 0.00 0.00 0.00 2.90
3134 3243 6.344500 CAAAGCATTCTGGTAGACTATGAGT 58.656 40.000 0.00 0.00 0.00 3.41
3135 3244 6.552445 AAGCATTCTGGTAGACTATGAGTT 57.448 37.500 0.00 0.00 0.00 3.01
3136 3245 7.661536 AAGCATTCTGGTAGACTATGAGTTA 57.338 36.000 0.00 0.00 0.00 2.24
3137 3246 7.847711 AGCATTCTGGTAGACTATGAGTTAT 57.152 36.000 0.00 0.00 0.00 1.89
3138 3247 8.941995 AGCATTCTGGTAGACTATGAGTTATA 57.058 34.615 0.00 0.00 0.00 0.98
3139 3248 9.540538 AGCATTCTGGTAGACTATGAGTTATAT 57.459 33.333 0.00 0.00 0.00 0.86
3140 3249 9.579768 GCATTCTGGTAGACTATGAGTTATATG 57.420 37.037 0.00 0.00 0.00 1.78
3150 3259 9.352191 AGACTATGAGTTATATGTAAAGTCGGT 57.648 33.333 5.75 0.00 0.00 4.69
3168 3277 7.915293 AGTCGGTACATTTCATTATTTCACA 57.085 32.000 0.00 0.00 0.00 3.58
3169 3278 8.506168 AGTCGGTACATTTCATTATTTCACAT 57.494 30.769 0.00 0.00 0.00 3.21
3170 3279 9.607988 AGTCGGTACATTTCATTATTTCACATA 57.392 29.630 0.00 0.00 0.00 2.29
3173 3282 9.995957 CGGTACATTTCATTATTTCACATAACA 57.004 29.630 0.00 0.00 0.00 2.41
3186 3295 8.867112 ATTTCACATAACAATCATGATTCTGC 57.133 30.769 18.16 0.00 0.00 4.26
3187 3296 6.051646 TCACATAACAATCATGATTCTGCG 57.948 37.500 18.16 9.66 0.00 5.18
3188 3297 5.007921 TCACATAACAATCATGATTCTGCGG 59.992 40.000 18.16 9.30 0.00 5.69
3189 3298 2.857592 AACAATCATGATTCTGCGGC 57.142 45.000 18.16 0.00 0.00 6.53
3190 3299 1.753930 ACAATCATGATTCTGCGGCA 58.246 45.000 18.16 1.29 0.00 5.69
3191 3300 2.093890 ACAATCATGATTCTGCGGCAA 58.906 42.857 18.16 0.00 0.00 4.52
3192 3301 2.492881 ACAATCATGATTCTGCGGCAAA 59.507 40.909 18.16 2.10 0.00 3.68
3193 3302 2.855963 CAATCATGATTCTGCGGCAAAC 59.144 45.455 18.16 0.00 0.00 2.93
3194 3303 1.532523 TCATGATTCTGCGGCAAACA 58.467 45.000 3.44 2.47 0.00 2.83
3195 3304 1.885233 TCATGATTCTGCGGCAAACAA 59.115 42.857 3.44 0.00 0.00 2.83
3196 3305 2.295629 TCATGATTCTGCGGCAAACAAA 59.704 40.909 3.44 0.00 0.00 2.83
3197 3306 3.056678 TCATGATTCTGCGGCAAACAAAT 60.057 39.130 3.44 1.84 0.00 2.32
3198 3307 2.945278 TGATTCTGCGGCAAACAAATC 58.055 42.857 3.44 11.17 0.00 2.17
3199 3308 2.295629 TGATTCTGCGGCAAACAAATCA 59.704 40.909 18.09 18.09 32.38 2.57
3200 3309 3.056678 TGATTCTGCGGCAAACAAATCAT 60.057 39.130 18.09 0.00 30.47 2.45
3201 3310 4.157472 TGATTCTGCGGCAAACAAATCATA 59.843 37.500 18.09 5.15 30.47 2.15
3202 3311 4.717233 TTCTGCGGCAAACAAATCATAT 57.283 36.364 3.44 0.00 0.00 1.78
3203 3312 4.031418 TCTGCGGCAAACAAATCATATG 57.969 40.909 3.44 0.00 0.00 1.78
3204 3313 3.443329 TCTGCGGCAAACAAATCATATGT 59.557 39.130 3.44 0.00 0.00 2.29
3205 3314 3.768406 TGCGGCAAACAAATCATATGTC 58.232 40.909 0.00 0.00 0.00 3.06
3206 3315 3.192212 TGCGGCAAACAAATCATATGTCA 59.808 39.130 0.00 0.00 0.00 3.58
3207 3316 3.792956 GCGGCAAACAAATCATATGTCAG 59.207 43.478 1.90 0.00 0.00 3.51
3208 3317 4.438608 GCGGCAAACAAATCATATGTCAGA 60.439 41.667 1.90 0.00 0.00 3.27
3209 3318 5.639757 CGGCAAACAAATCATATGTCAGAA 58.360 37.500 1.90 0.00 0.00 3.02
3210 3319 5.740569 CGGCAAACAAATCATATGTCAGAAG 59.259 40.000 1.90 0.00 0.00 2.85
3211 3320 5.517770 GGCAAACAAATCATATGTCAGAAGC 59.482 40.000 1.90 0.00 0.00 3.86
3212 3321 5.228635 GCAAACAAATCATATGTCAGAAGCG 59.771 40.000 1.90 0.00 0.00 4.68
3213 3322 6.545508 CAAACAAATCATATGTCAGAAGCGA 58.454 36.000 1.90 0.00 0.00 4.93
3214 3323 5.980698 ACAAATCATATGTCAGAAGCGAG 57.019 39.130 1.90 0.00 0.00 5.03
3215 3324 5.423015 ACAAATCATATGTCAGAAGCGAGT 58.577 37.500 1.90 0.00 0.00 4.18
3216 3325 5.877012 ACAAATCATATGTCAGAAGCGAGTT 59.123 36.000 1.90 0.00 0.00 3.01
3217 3326 5.980698 AATCATATGTCAGAAGCGAGTTG 57.019 39.130 1.90 0.00 0.00 3.16
3218 3327 4.456280 TCATATGTCAGAAGCGAGTTGT 57.544 40.909 1.90 0.00 0.00 3.32
3219 3328 4.820897 TCATATGTCAGAAGCGAGTTGTT 58.179 39.130 1.90 0.00 0.00 2.83
3220 3329 4.627035 TCATATGTCAGAAGCGAGTTGTTG 59.373 41.667 1.90 0.00 0.00 3.33
3221 3330 0.937304 TGTCAGAAGCGAGTTGTTGC 59.063 50.000 0.00 0.00 0.00 4.17
3222 3331 0.937304 GTCAGAAGCGAGTTGTTGCA 59.063 50.000 0.00 0.00 35.18 4.08
3223 3332 1.070309 GTCAGAAGCGAGTTGTTGCAG 60.070 52.381 0.00 0.00 35.18 4.41
3224 3333 0.385223 CAGAAGCGAGTTGTTGCAGC 60.385 55.000 0.00 0.00 35.18 5.25
3225 3334 1.439365 GAAGCGAGTTGTTGCAGCG 60.439 57.895 0.00 0.00 35.18 5.18
3226 3335 2.105960 GAAGCGAGTTGTTGCAGCGT 62.106 55.000 0.00 0.00 35.18 5.07
3227 3336 0.878523 AAGCGAGTTGTTGCAGCGTA 60.879 50.000 0.00 0.00 35.18 4.42
3228 3337 1.130613 GCGAGTTGTTGCAGCGTAG 59.869 57.895 0.00 0.00 32.59 3.51
3229 3338 1.282248 GCGAGTTGTTGCAGCGTAGA 61.282 55.000 0.00 0.00 32.59 2.59
3230 3339 0.435008 CGAGTTGTTGCAGCGTAGAC 59.565 55.000 0.00 0.00 0.00 2.59
3231 3340 0.790814 GAGTTGTTGCAGCGTAGACC 59.209 55.000 0.00 0.00 0.00 3.85
3232 3341 0.944311 AGTTGTTGCAGCGTAGACCG 60.944 55.000 0.00 0.00 40.40 4.79
3233 3342 1.666553 TTGTTGCAGCGTAGACCGG 60.667 57.895 0.00 0.00 36.94 5.28
3234 3343 2.813908 GTTGCAGCGTAGACCGGG 60.814 66.667 6.32 0.00 36.94 5.73
3235 3344 4.077184 TTGCAGCGTAGACCGGGG 62.077 66.667 6.32 0.00 36.94 5.73
3237 3346 4.208686 GCAGCGTAGACCGGGGAG 62.209 72.222 6.32 0.00 36.94 4.30
3239 3348 4.835891 AGCGTAGACCGGGGAGGG 62.836 72.222 6.32 0.00 46.96 4.30
3240 3349 4.828296 GCGTAGACCGGGGAGGGA 62.828 72.222 6.32 0.00 46.96 4.20
3241 3350 2.043652 CGTAGACCGGGGAGGGAA 60.044 66.667 6.32 0.00 46.96 3.97
3242 3351 1.457079 CGTAGACCGGGGAGGGAAT 60.457 63.158 6.32 0.00 46.96 3.01
3243 3352 0.178981 CGTAGACCGGGGAGGGAATA 60.179 60.000 6.32 0.00 46.96 1.75
3244 3353 1.630223 GTAGACCGGGGAGGGAATAG 58.370 60.000 6.32 0.00 46.96 1.73
3245 3354 1.146566 GTAGACCGGGGAGGGAATAGA 59.853 57.143 6.32 0.00 46.96 1.98
3246 3355 0.188834 AGACCGGGGAGGGAATAGAG 59.811 60.000 6.32 0.00 46.96 2.43
3247 3356 0.187851 GACCGGGGAGGGAATAGAGA 59.812 60.000 6.32 0.00 46.96 3.10
3248 3357 0.188834 ACCGGGGAGGGAATAGAGAG 59.811 60.000 6.32 0.00 46.96 3.20
3249 3358 0.483328 CCGGGGAGGGAATAGAGAGA 59.517 60.000 0.00 0.00 35.97 3.10
3250 3359 1.133136 CCGGGGAGGGAATAGAGAGAA 60.133 57.143 0.00 0.00 35.97 2.87
3251 3360 2.679082 CGGGGAGGGAATAGAGAGAAA 58.321 52.381 0.00 0.00 0.00 2.52
3252 3361 2.365941 CGGGGAGGGAATAGAGAGAAAC 59.634 54.545 0.00 0.00 0.00 2.78
3253 3362 3.385115 GGGGAGGGAATAGAGAGAAACA 58.615 50.000 0.00 0.00 0.00 2.83
3254 3363 3.389656 GGGGAGGGAATAGAGAGAAACAG 59.610 52.174 0.00 0.00 0.00 3.16
3255 3364 3.389656 GGGAGGGAATAGAGAGAAACAGG 59.610 52.174 0.00 0.00 0.00 4.00
3256 3365 3.389656 GGAGGGAATAGAGAGAAACAGGG 59.610 52.174 0.00 0.00 0.00 4.45
3257 3366 3.388913 AGGGAATAGAGAGAAACAGGGG 58.611 50.000 0.00 0.00 0.00 4.79
3258 3367 2.439880 GGGAATAGAGAGAAACAGGGGG 59.560 54.545 0.00 0.00 0.00 5.40
3259 3368 2.158740 GGAATAGAGAGAAACAGGGGGC 60.159 54.545 0.00 0.00 0.00 5.80
3260 3369 1.123928 ATAGAGAGAAACAGGGGGCG 58.876 55.000 0.00 0.00 0.00 6.13
3261 3370 0.040646 TAGAGAGAAACAGGGGGCGA 59.959 55.000 0.00 0.00 0.00 5.54
3262 3371 0.836400 AGAGAGAAACAGGGGGCGAA 60.836 55.000 0.00 0.00 0.00 4.70
3263 3372 0.253327 GAGAGAAACAGGGGGCGAAT 59.747 55.000 0.00 0.00 0.00 3.34
3264 3373 1.485066 GAGAGAAACAGGGGGCGAATA 59.515 52.381 0.00 0.00 0.00 1.75
3265 3374 2.104963 GAGAGAAACAGGGGGCGAATAT 59.895 50.000 0.00 0.00 0.00 1.28
3266 3375 2.104963 AGAGAAACAGGGGGCGAATATC 59.895 50.000 0.00 0.00 0.00 1.63
3267 3376 1.843851 AGAAACAGGGGGCGAATATCA 59.156 47.619 0.00 0.00 0.00 2.15
3268 3377 2.443255 AGAAACAGGGGGCGAATATCAT 59.557 45.455 0.00 0.00 0.00 2.45
3269 3378 2.276732 AACAGGGGGCGAATATCATG 57.723 50.000 0.00 0.00 0.00 3.07
3270 3379 1.140312 ACAGGGGGCGAATATCATGT 58.860 50.000 0.00 0.00 0.00 3.21
3271 3380 1.494721 ACAGGGGGCGAATATCATGTT 59.505 47.619 0.00 0.00 0.00 2.71
3272 3381 1.881973 CAGGGGGCGAATATCATGTTG 59.118 52.381 0.00 0.00 0.00 3.33
3273 3382 1.774254 AGGGGGCGAATATCATGTTGA 59.226 47.619 0.00 0.00 0.00 3.18
3274 3383 2.376518 AGGGGGCGAATATCATGTTGAT 59.623 45.455 0.00 0.00 40.72 2.57
3275 3384 2.749621 GGGGGCGAATATCATGTTGATC 59.250 50.000 0.00 0.00 38.26 2.92
3276 3385 3.560025 GGGGGCGAATATCATGTTGATCT 60.560 47.826 0.00 0.00 38.26 2.75
3277 3386 3.438087 GGGGCGAATATCATGTTGATCTG 59.562 47.826 0.00 0.00 38.26 2.90
3278 3387 4.318332 GGGCGAATATCATGTTGATCTGA 58.682 43.478 0.00 0.00 38.26 3.27
3279 3388 4.940046 GGGCGAATATCATGTTGATCTGAT 59.060 41.667 0.00 0.00 38.26 2.90
3280 3389 5.163784 GGGCGAATATCATGTTGATCTGATG 60.164 44.000 0.00 0.45 38.26 3.07
3281 3390 5.163784 GGCGAATATCATGTTGATCTGATGG 60.164 44.000 0.00 0.00 38.26 3.51
3282 3391 5.410746 GCGAATATCATGTTGATCTGATGGT 59.589 40.000 0.00 0.00 38.26 3.55
3283 3392 6.620089 GCGAATATCATGTTGATCTGATGGTG 60.620 42.308 0.00 0.00 38.26 4.17
3284 3393 6.647895 CGAATATCATGTTGATCTGATGGTGA 59.352 38.462 0.00 0.00 38.26 4.02
3285 3394 7.333672 CGAATATCATGTTGATCTGATGGTGAT 59.666 37.037 0.00 5.27 38.26 3.06
3286 3395 7.923414 ATATCATGTTGATCTGATGGTGATG 57.077 36.000 0.00 0.00 38.26 3.07
3287 3396 3.881089 TCATGTTGATCTGATGGTGATGC 59.119 43.478 0.00 0.00 0.00 3.91
3288 3397 2.646930 TGTTGATCTGATGGTGATGCC 58.353 47.619 0.00 0.00 37.90 4.40
3289 3398 8.832442 ATCATGTTGATCTGATGGTGATGCCA 62.832 42.308 0.00 0.00 41.91 4.92
3300 3409 3.933879 TGATGCCATCACAAGACGT 57.066 47.368 2.53 0.00 33.59 4.34
3302 3411 0.729116 GATGCCATCACAAGACGTGG 59.271 55.000 0.00 0.00 46.36 4.94
3303 3412 0.324614 ATGCCATCACAAGACGTGGA 59.675 50.000 0.00 0.00 46.36 4.02
3304 3413 0.324614 TGCCATCACAAGACGTGGAT 59.675 50.000 0.00 0.00 46.36 3.41
3305 3414 1.271325 TGCCATCACAAGACGTGGATT 60.271 47.619 0.00 0.00 46.36 3.01
3306 3415 1.812571 GCCATCACAAGACGTGGATTT 59.187 47.619 0.00 0.00 46.36 2.17
3307 3416 2.414559 GCCATCACAAGACGTGGATTTG 60.415 50.000 0.00 0.00 46.36 2.32
3308 3417 2.813754 CCATCACAAGACGTGGATTTGT 59.186 45.455 0.00 0.00 46.36 2.83
3309 3418 3.253188 CCATCACAAGACGTGGATTTGTT 59.747 43.478 0.00 0.00 46.36 2.83
3310 3419 4.261572 CCATCACAAGACGTGGATTTGTTT 60.262 41.667 0.00 0.00 46.36 2.83
3311 3420 4.545823 TCACAAGACGTGGATTTGTTTC 57.454 40.909 0.00 0.00 46.36 2.78
3312 3421 3.942115 TCACAAGACGTGGATTTGTTTCA 59.058 39.130 0.00 0.00 46.36 2.69
3313 3422 4.396478 TCACAAGACGTGGATTTGTTTCAA 59.604 37.500 0.00 0.00 46.36 2.69
3314 3423 5.067153 TCACAAGACGTGGATTTGTTTCAAT 59.933 36.000 0.00 0.00 46.36 2.57
3315 3424 5.173673 CACAAGACGTGGATTTGTTTCAATG 59.826 40.000 0.00 0.00 42.34 2.82
3316 3425 5.067153 ACAAGACGTGGATTTGTTTCAATGA 59.933 36.000 0.00 0.00 31.38 2.57
3317 3426 5.766150 AGACGTGGATTTGTTTCAATGAA 57.234 34.783 0.00 0.00 0.00 2.57
3318 3427 6.331369 AGACGTGGATTTGTTTCAATGAAT 57.669 33.333 0.00 0.00 0.00 2.57
3319 3428 6.151691 AGACGTGGATTTGTTTCAATGAATG 58.848 36.000 0.00 0.00 0.00 2.67
3320 3429 4.685628 ACGTGGATTTGTTTCAATGAATGC 59.314 37.500 0.00 0.00 0.00 3.56
3321 3430 4.925054 CGTGGATTTGTTTCAATGAATGCT 59.075 37.500 0.00 0.00 0.00 3.79
3322 3431 5.406175 CGTGGATTTGTTTCAATGAATGCTT 59.594 36.000 0.00 0.00 0.00 3.91
3323 3432 6.073657 CGTGGATTTGTTTCAATGAATGCTTT 60.074 34.615 0.00 0.00 0.00 3.51
3324 3433 7.116090 CGTGGATTTGTTTCAATGAATGCTTTA 59.884 33.333 0.00 0.00 0.00 1.85
3325 3434 8.938906 GTGGATTTGTTTCAATGAATGCTTTAT 58.061 29.630 0.00 0.00 0.00 1.40
3326 3435 9.504708 TGGATTTGTTTCAATGAATGCTTTATT 57.495 25.926 0.00 0.00 0.00 1.40
3327 3436 9.763465 GGATTTGTTTCAATGAATGCTTTATTG 57.237 29.630 0.00 6.91 34.07 1.90
3328 3437 9.269415 GATTTGTTTCAATGAATGCTTTATTGC 57.731 29.630 0.00 0.00 33.10 3.56
3329 3438 7.966246 TTGTTTCAATGAATGCTTTATTGCT 57.034 28.000 0.00 0.00 33.10 3.91
3330 3439 7.966246 TGTTTCAATGAATGCTTTATTGCTT 57.034 28.000 0.00 0.00 33.10 3.91
3331 3440 8.380743 TGTTTCAATGAATGCTTTATTGCTTT 57.619 26.923 0.00 0.00 33.10 3.51
3332 3441 8.283992 TGTTTCAATGAATGCTTTATTGCTTTG 58.716 29.630 0.00 0.00 33.10 2.77
3333 3442 8.497554 GTTTCAATGAATGCTTTATTGCTTTGA 58.502 29.630 0.00 0.00 33.10 2.69
3334 3443 8.604640 TTCAATGAATGCTTTATTGCTTTGAA 57.395 26.923 0.00 0.00 33.69 2.69
3335 3444 8.604640 TCAATGAATGCTTTATTGCTTTGAAA 57.395 26.923 7.87 0.00 33.10 2.69
3336 3445 8.714179 TCAATGAATGCTTTATTGCTTTGAAAG 58.286 29.630 0.00 0.00 33.10 2.62
3337 3446 7.605410 ATGAATGCTTTATTGCTTTGAAAGG 57.395 32.000 7.09 0.00 32.03 3.11
3338 3447 5.933463 TGAATGCTTTATTGCTTTGAAAGGG 59.067 36.000 7.09 0.00 32.03 3.95
3339 3448 4.270245 TGCTTTATTGCTTTGAAAGGGG 57.730 40.909 7.09 0.00 32.03 4.79
3340 3449 3.645687 TGCTTTATTGCTTTGAAAGGGGT 59.354 39.130 7.09 0.00 32.03 4.95
3341 3450 3.996363 GCTTTATTGCTTTGAAAGGGGTG 59.004 43.478 7.09 0.00 32.03 4.61
3342 3451 3.676291 TTATTGCTTTGAAAGGGGTGC 57.324 42.857 7.09 0.00 0.00 5.01
3343 3452 1.720781 ATTGCTTTGAAAGGGGTGCT 58.279 45.000 7.09 0.00 0.00 4.40
3344 3453 1.494960 TTGCTTTGAAAGGGGTGCTT 58.505 45.000 7.09 0.00 0.00 3.91
3345 3454 2.373335 TGCTTTGAAAGGGGTGCTTA 57.627 45.000 7.09 0.00 0.00 3.09
3351 3460 2.054799 TGAAAGGGGTGCTTAGTGTCT 58.945 47.619 0.00 0.00 0.00 3.41
3357 3466 1.014564 GGTGCTTAGTGTCTGGCGTC 61.015 60.000 0.00 0.00 0.00 5.19
3360 3469 1.001974 TGCTTAGTGTCTGGCGTCAAT 59.998 47.619 0.00 0.00 0.00 2.57
3408 3517 9.138062 CAACAAGTCTATATCTACATGCTCATC 57.862 37.037 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.038941 CGATCTATAAAGTAAATCCCCTGTCCT 60.039 40.741 0.00 0.00 0.00 3.85
36 37 5.293560 GCTGCCTCCAGACTAATTAGTAAG 58.706 45.833 18.03 12.80 41.77 2.34
136 137 5.550403 TCCCCAGTCTGTATCTAAGGTTTTT 59.450 40.000 0.00 0.00 0.00 1.94
137 138 5.045797 GTCCCCAGTCTGTATCTAAGGTTTT 60.046 44.000 0.00 0.00 0.00 2.43
138 139 4.470304 GTCCCCAGTCTGTATCTAAGGTTT 59.530 45.833 0.00 0.00 0.00 3.27
139 140 4.031611 GTCCCCAGTCTGTATCTAAGGTT 58.968 47.826 0.00 0.00 0.00 3.50
140 141 3.630311 GGTCCCCAGTCTGTATCTAAGGT 60.630 52.174 0.00 0.00 0.00 3.50
141 142 2.966516 GGTCCCCAGTCTGTATCTAAGG 59.033 54.545 0.00 0.00 0.00 2.69
142 143 2.623889 CGGTCCCCAGTCTGTATCTAAG 59.376 54.545 0.00 0.00 0.00 2.18
143 144 2.024655 ACGGTCCCCAGTCTGTATCTAA 60.025 50.000 0.00 0.00 0.00 2.10
144 145 1.567649 ACGGTCCCCAGTCTGTATCTA 59.432 52.381 0.00 0.00 0.00 1.98
145 146 0.335361 ACGGTCCCCAGTCTGTATCT 59.665 55.000 0.00 0.00 0.00 1.98
146 147 0.460311 CACGGTCCCCAGTCTGTATC 59.540 60.000 0.00 0.00 0.00 2.24
147 148 1.614241 GCACGGTCCCCAGTCTGTAT 61.614 60.000 0.00 0.00 0.00 2.29
148 149 2.280552 GCACGGTCCCCAGTCTGTA 61.281 63.158 0.00 0.00 0.00 2.74
149 150 3.626924 GCACGGTCCCCAGTCTGT 61.627 66.667 0.00 0.00 0.00 3.41
184 185 9.525826 AAAAATAGACATCAAGAATCCTGAACT 57.474 29.630 0.00 0.00 0.00 3.01
263 267 6.150307 ACAGTTTTTATATCACGGTGAATGCA 59.850 34.615 15.72 1.42 0.00 3.96
288 293 1.467204 CGGCGCATGAAAGCATAACAA 60.467 47.619 10.83 0.00 32.27 2.83
301 306 0.249489 GATCCTACTTCACGGCGCAT 60.249 55.000 10.83 0.00 0.00 4.73
313 318 6.761714 ACGTTACATGAATGAAAGGATCCTAC 59.238 38.462 16.55 13.01 0.00 3.18
367 372 8.093307 AGAATGTAATCATATGAGCTACACCAG 58.907 37.037 23.07 0.00 32.56 4.00
405 410 1.383523 GGGAACATGAGCTAGTTGCC 58.616 55.000 16.93 16.93 46.44 4.52
411 416 2.202878 GCGCGGGAACATGAGCTA 60.203 61.111 8.83 0.00 0.00 3.32
547 570 5.455849 CGTTACATGAGATGTTCCTACTTCG 59.544 44.000 0.00 0.00 41.63 3.79
827 855 4.215908 CACTAGGATGTAGGAGGCTGTTA 58.784 47.826 0.00 0.00 0.00 2.41
902 930 5.311265 TCACATGCTCTGTTCAATCTTCTT 58.689 37.500 0.00 0.00 35.29 2.52
1157 1215 0.533032 AACCGAAGAGCTGCCTAGAC 59.467 55.000 0.00 0.00 0.00 2.59
1208 1266 1.134521 TGTCAGTGTCACACTTCCCAC 60.135 52.381 8.05 3.51 42.59 4.61
1213 1271 2.172505 TCCCATTGTCAGTGTCACACTT 59.827 45.455 8.05 0.00 42.59 3.16
1223 1281 0.949397 CCGCATCATCCCATTGTCAG 59.051 55.000 0.00 0.00 0.00 3.51
1239 1297 0.539986 TCCTATCACTTGGAACCCGC 59.460 55.000 0.00 0.00 0.00 6.13
1301 1359 0.036858 GGCAGAAGAGACCGAAAGCT 60.037 55.000 0.00 0.00 0.00 3.74
1308 1366 0.693049 TTTGAGGGGCAGAAGAGACC 59.307 55.000 0.00 0.00 0.00 3.85
1536 1594 4.215965 GCTTAGCTAGAAGACGAATCTCG 58.784 47.826 0.00 0.00 46.93 4.04
1545 1603 4.222810 TCCATGTTGTGCTTAGCTAGAAGA 59.777 41.667 5.60 0.00 0.00 2.87
1581 1640 6.265422 AGTTTATAGCCCCACAATTAGCAATC 59.735 38.462 0.00 0.00 0.00 2.67
1860 1919 1.750399 CCCATTTCCCAGCAGGTCG 60.750 63.158 0.00 0.00 36.75 4.79
1864 1923 1.755783 GGCTCCCATTTCCCAGCAG 60.756 63.158 0.00 0.00 33.22 4.24
2365 2434 1.138069 GGAAGTAGCTGAGAAGAGCCC 59.862 57.143 0.00 0.00 40.08 5.19
2443 2520 7.094377 GGGAATGCTTGATGTACACTAGAAAAA 60.094 37.037 0.00 0.00 0.00 1.94
2448 2542 4.130118 GGGGAATGCTTGATGTACACTAG 58.870 47.826 0.00 0.31 0.00 2.57
2527 2624 6.823497 TGAGATGATGAGCACAATCTCAATA 58.177 36.000 19.82 4.11 45.17 1.90
2560 2658 5.938125 GTCACAAACACACCTACTAATCCAT 59.062 40.000 0.00 0.00 0.00 3.41
2570 2668 0.108520 ACGACGTCACAAACACACCT 60.109 50.000 17.16 0.00 0.00 4.00
2590 2696 5.079406 CGAAAATACACCATCTCAACAACG 58.921 41.667 0.00 0.00 0.00 4.10
2663 2772 9.982651 ATCAGCTAATAACATGTACGAAATACT 57.017 29.630 0.00 0.00 34.56 2.12
2666 2775 9.325198 TGAATCAGCTAATAACATGTACGAAAT 57.675 29.630 0.00 0.00 0.00 2.17
2706 2815 0.965363 GAAGGGAAAGAATGCGGGCA 60.965 55.000 0.00 0.00 0.00 5.36
2710 2819 2.675348 GACAGAGAAGGGAAAGAATGCG 59.325 50.000 0.00 0.00 0.00 4.73
2715 2824 5.263872 AGTCTAGACAGAGAAGGGAAAGA 57.736 43.478 24.44 0.00 0.00 2.52
2721 2830 5.496556 TCTCTCAAGTCTAGACAGAGAAGG 58.503 45.833 31.02 24.68 41.11 3.46
2770 2879 0.175073 GCCCTAACCTACGGTCACAG 59.825 60.000 0.00 0.00 33.12 3.66
2794 2903 0.608130 TCACAGAGCGCCAGTACATT 59.392 50.000 2.29 0.00 0.00 2.71
2803 2912 2.568696 TCAGTTCTATCACAGAGCGC 57.431 50.000 0.00 0.00 39.36 5.92
2839 2948 0.466555 AGCTAGGTCCGCTCCTGTAG 60.467 60.000 6.84 0.00 38.41 2.74
2840 2949 0.465824 GAGCTAGGTCCGCTCCTGTA 60.466 60.000 10.97 0.00 46.22 2.74
2841 2950 1.755008 GAGCTAGGTCCGCTCCTGT 60.755 63.158 10.97 0.00 46.22 4.00
2842 2951 3.124686 GAGCTAGGTCCGCTCCTG 58.875 66.667 10.97 0.07 46.22 3.86
2846 2955 0.612174 TGAGTTGAGCTAGGTCCGCT 60.612 55.000 18.90 15.64 41.15 5.52
2847 2956 0.246635 TTGAGTTGAGCTAGGTCCGC 59.753 55.000 18.90 11.37 0.00 5.54
2848 2957 1.272490 TGTTGAGTTGAGCTAGGTCCG 59.728 52.381 18.90 0.00 0.00 4.79
2849 2958 3.265791 CATGTTGAGTTGAGCTAGGTCC 58.734 50.000 18.90 4.86 0.00 4.46
2850 2959 3.265791 CCATGTTGAGTTGAGCTAGGTC 58.734 50.000 15.12 15.12 0.00 3.85
2851 2960 2.639839 ACCATGTTGAGTTGAGCTAGGT 59.360 45.455 0.00 0.00 0.00 3.08
2852 2961 3.005554 CACCATGTTGAGTTGAGCTAGG 58.994 50.000 0.00 0.00 0.00 3.02
2853 2962 3.005554 CCACCATGTTGAGTTGAGCTAG 58.994 50.000 0.00 0.00 0.00 3.42
2854 2963 2.290260 CCCACCATGTTGAGTTGAGCTA 60.290 50.000 0.00 0.00 0.00 3.32
2855 2964 1.546323 CCCACCATGTTGAGTTGAGCT 60.546 52.381 0.00 0.00 0.00 4.09
2856 2965 0.883833 CCCACCATGTTGAGTTGAGC 59.116 55.000 0.00 0.00 0.00 4.26
2857 2966 2.276732 ACCCACCATGTTGAGTTGAG 57.723 50.000 0.00 0.00 0.00 3.02
2858 2967 2.746279 AACCCACCATGTTGAGTTGA 57.254 45.000 0.00 0.00 0.00 3.18
2859 2968 3.118811 ACAAAACCCACCATGTTGAGTTG 60.119 43.478 0.00 0.00 0.00 3.16
2860 2969 3.103742 ACAAAACCCACCATGTTGAGTT 58.896 40.909 0.00 0.00 0.00 3.01
2861 2970 2.430332 CACAAAACCCACCATGTTGAGT 59.570 45.455 0.00 0.00 0.00 3.41
2862 2971 2.692557 TCACAAAACCCACCATGTTGAG 59.307 45.455 0.00 0.00 0.00 3.02
2863 2972 2.739943 TCACAAAACCCACCATGTTGA 58.260 42.857 0.00 0.00 0.00 3.18
2864 2973 3.069300 TCATCACAAAACCCACCATGTTG 59.931 43.478 0.00 0.00 0.00 3.33
2865 2974 3.303938 TCATCACAAAACCCACCATGTT 58.696 40.909 0.00 0.00 0.00 2.71
2866 2975 2.956132 TCATCACAAAACCCACCATGT 58.044 42.857 0.00 0.00 0.00 3.21
2867 2976 4.333913 TTTCATCACAAAACCCACCATG 57.666 40.909 0.00 0.00 0.00 3.66
2868 2977 5.163216 ACAATTTCATCACAAAACCCACCAT 60.163 36.000 0.00 0.00 0.00 3.55
2869 2978 4.163078 ACAATTTCATCACAAAACCCACCA 59.837 37.500 0.00 0.00 0.00 4.17
2870 2979 4.702831 ACAATTTCATCACAAAACCCACC 58.297 39.130 0.00 0.00 0.00 4.61
2871 2980 6.676237 AAACAATTTCATCACAAAACCCAC 57.324 33.333 0.00 0.00 0.00 4.61
2872 2981 6.763610 GGTAAACAATTTCATCACAAAACCCA 59.236 34.615 0.00 0.00 0.00 4.51
2873 2982 6.763610 TGGTAAACAATTTCATCACAAAACCC 59.236 34.615 0.00 0.00 0.00 4.11
2874 2983 7.278868 TGTGGTAAACAATTTCATCACAAAACC 59.721 33.333 0.00 0.00 35.24 3.27
2875 2984 8.190888 TGTGGTAAACAATTTCATCACAAAAC 57.809 30.769 0.00 0.00 35.24 2.43
2876 2985 8.954950 ATGTGGTAAACAATTTCATCACAAAA 57.045 26.923 0.00 0.00 43.61 2.44
2877 2986 8.954950 AATGTGGTAAACAATTTCATCACAAA 57.045 26.923 0.00 0.00 43.61 2.83
2879 2988 9.636879 CATAATGTGGTAAACAATTTCATCACA 57.363 29.630 0.00 0.00 43.61 3.58
2880 2989 8.594687 GCATAATGTGGTAAACAATTTCATCAC 58.405 33.333 0.00 0.00 43.61 3.06
2881 2990 8.309656 TGCATAATGTGGTAAACAATTTCATCA 58.690 29.630 0.00 0.00 43.61 3.07
2882 2991 8.700722 TGCATAATGTGGTAAACAATTTCATC 57.299 30.769 0.00 0.00 43.61 2.92
2883 2992 9.499479 TTTGCATAATGTGGTAAACAATTTCAT 57.501 25.926 0.00 0.00 43.61 2.57
2884 2993 8.893219 TTTGCATAATGTGGTAAACAATTTCA 57.107 26.923 0.00 0.00 43.61 2.69
2887 2996 9.499479 TCATTTTGCATAATGTGGTAAACAATT 57.501 25.926 23.57 0.00 43.61 2.32
2888 2997 9.499479 TTCATTTTGCATAATGTGGTAAACAAT 57.501 25.926 23.57 0.00 43.61 2.71
2889 2998 8.893219 TTCATTTTGCATAATGTGGTAAACAA 57.107 26.923 23.57 9.86 43.61 2.83
2890 2999 8.893219 TTTCATTTTGCATAATGTGGTAAACA 57.107 26.923 23.57 5.06 44.79 2.83
2894 3003 9.499479 ACAAATTTCATTTTGCATAATGTGGTA 57.501 25.926 23.57 11.73 39.65 3.25
2895 3004 8.393671 ACAAATTTCATTTTGCATAATGTGGT 57.606 26.923 23.57 9.98 39.65 4.16
2896 3005 9.680315 AAACAAATTTCATTTTGCATAATGTGG 57.320 25.926 23.57 9.46 39.65 4.17
2926 3035 9.959749 GAAAAACAATTAGTACAATCACAAGGA 57.040 29.630 0.00 0.00 0.00 3.36
2927 3036 9.965824 AGAAAAACAATTAGTACAATCACAAGG 57.034 29.630 0.00 0.00 0.00 3.61
2956 3065 8.765219 CGAAACATGTCTCTTCTTTTTCTCTTA 58.235 33.333 0.00 0.00 0.00 2.10
2957 3066 7.281100 ACGAAACATGTCTCTTCTTTTTCTCTT 59.719 33.333 0.00 0.00 0.00 2.85
2958 3067 6.763610 ACGAAACATGTCTCTTCTTTTTCTCT 59.236 34.615 0.00 0.00 0.00 3.10
2959 3068 6.848296 CACGAAACATGTCTCTTCTTTTTCTC 59.152 38.462 0.00 0.00 0.00 2.87
2960 3069 6.316390 ACACGAAACATGTCTCTTCTTTTTCT 59.684 34.615 0.00 0.00 0.00 2.52
2961 3070 6.412072 CACACGAAACATGTCTCTTCTTTTTC 59.588 38.462 0.00 0.00 0.00 2.29
2962 3071 6.128007 ACACACGAAACATGTCTCTTCTTTTT 60.128 34.615 0.00 0.00 0.00 1.94
2963 3072 5.354234 ACACACGAAACATGTCTCTTCTTTT 59.646 36.000 0.00 0.00 0.00 2.27
2964 3073 4.876107 ACACACGAAACATGTCTCTTCTTT 59.124 37.500 0.00 0.00 0.00 2.52
2965 3074 4.442706 ACACACGAAACATGTCTCTTCTT 58.557 39.130 0.00 0.00 0.00 2.52
2966 3075 4.060038 ACACACGAAACATGTCTCTTCT 57.940 40.909 0.00 0.00 0.00 2.85
2967 3076 4.518217 CAACACACGAAACATGTCTCTTC 58.482 43.478 0.00 0.00 0.00 2.87
2968 3077 3.242739 GCAACACACGAAACATGTCTCTT 60.243 43.478 0.00 0.00 0.00 2.85
2969 3078 2.287915 GCAACACACGAAACATGTCTCT 59.712 45.455 0.00 0.00 0.00 3.10
2970 3079 2.287915 AGCAACACACGAAACATGTCTC 59.712 45.455 0.00 0.00 0.00 3.36
2971 3080 2.032054 CAGCAACACACGAAACATGTCT 59.968 45.455 0.00 0.00 0.00 3.41
2972 3081 2.223249 ACAGCAACACACGAAACATGTC 60.223 45.455 0.00 0.00 0.00 3.06
2973 3082 1.742831 ACAGCAACACACGAAACATGT 59.257 42.857 0.00 0.00 0.00 3.21
2974 3083 2.032054 AGACAGCAACACACGAAACATG 59.968 45.455 0.00 0.00 0.00 3.21
2975 3084 2.288666 AGACAGCAACACACGAAACAT 58.711 42.857 0.00 0.00 0.00 2.71
2976 3085 1.732941 AGACAGCAACACACGAAACA 58.267 45.000 0.00 0.00 0.00 2.83
2977 3086 3.741344 AGATAGACAGCAACACACGAAAC 59.259 43.478 0.00 0.00 0.00 2.78
2978 3087 3.987868 GAGATAGACAGCAACACACGAAA 59.012 43.478 0.00 0.00 0.00 3.46
2979 3088 3.005367 TGAGATAGACAGCAACACACGAA 59.995 43.478 0.00 0.00 0.00 3.85
2980 3089 2.556622 TGAGATAGACAGCAACACACGA 59.443 45.455 0.00 0.00 0.00 4.35
2981 3090 2.946564 TGAGATAGACAGCAACACACG 58.053 47.619 0.00 0.00 0.00 4.49
2982 3091 4.565962 CAGATGAGATAGACAGCAACACAC 59.434 45.833 0.00 0.00 0.00 3.82
2983 3092 4.382362 CCAGATGAGATAGACAGCAACACA 60.382 45.833 0.00 0.00 0.00 3.72
2984 3093 4.118410 CCAGATGAGATAGACAGCAACAC 58.882 47.826 0.00 0.00 0.00 3.32
2985 3094 3.771479 ACCAGATGAGATAGACAGCAACA 59.229 43.478 0.00 0.00 0.00 3.33
2986 3095 4.399004 ACCAGATGAGATAGACAGCAAC 57.601 45.455 0.00 0.00 0.00 4.17
2987 3096 5.452496 GCTAACCAGATGAGATAGACAGCAA 60.452 44.000 0.00 0.00 0.00 3.91
2988 3097 4.038522 GCTAACCAGATGAGATAGACAGCA 59.961 45.833 0.00 0.00 0.00 4.41
2989 3098 4.555262 GCTAACCAGATGAGATAGACAGC 58.445 47.826 0.00 0.00 0.00 4.40
2990 3099 4.517075 TCGCTAACCAGATGAGATAGACAG 59.483 45.833 0.00 0.00 0.00 3.51
2991 3100 4.461198 TCGCTAACCAGATGAGATAGACA 58.539 43.478 0.00 0.00 0.00 3.41
2992 3101 4.517453 ACTCGCTAACCAGATGAGATAGAC 59.483 45.833 0.00 0.00 32.82 2.59
2993 3102 4.720046 ACTCGCTAACCAGATGAGATAGA 58.280 43.478 0.00 0.00 32.82 1.98
2994 3103 5.446143 AACTCGCTAACCAGATGAGATAG 57.554 43.478 0.00 0.00 32.82 2.08
2995 3104 6.205076 GTCTAACTCGCTAACCAGATGAGATA 59.795 42.308 0.00 0.00 32.82 1.98
2996 3105 5.009210 GTCTAACTCGCTAACCAGATGAGAT 59.991 44.000 0.00 0.00 32.82 2.75
2997 3106 4.335874 GTCTAACTCGCTAACCAGATGAGA 59.664 45.833 0.00 0.00 32.82 3.27
2998 3107 4.498345 GGTCTAACTCGCTAACCAGATGAG 60.498 50.000 0.00 0.00 34.01 2.90
2999 3108 3.380637 GGTCTAACTCGCTAACCAGATGA 59.619 47.826 0.00 0.00 0.00 2.92
3000 3109 3.130516 TGGTCTAACTCGCTAACCAGATG 59.869 47.826 0.00 0.00 35.15 2.90
3001 3110 3.362706 TGGTCTAACTCGCTAACCAGAT 58.637 45.455 0.00 0.00 35.15 2.90
3002 3111 2.799017 TGGTCTAACTCGCTAACCAGA 58.201 47.619 0.00 0.00 35.15 3.86
3003 3112 3.587797 TTGGTCTAACTCGCTAACCAG 57.412 47.619 0.00 0.00 40.84 4.00
3004 3113 3.306502 CCTTTGGTCTAACTCGCTAACCA 60.307 47.826 0.00 0.00 38.20 3.67
3005 3114 3.056322 TCCTTTGGTCTAACTCGCTAACC 60.056 47.826 0.00 0.00 0.00 2.85
3006 3115 4.184079 TCCTTTGGTCTAACTCGCTAAC 57.816 45.455 0.00 0.00 0.00 2.34
3007 3116 4.755411 CATCCTTTGGTCTAACTCGCTAA 58.245 43.478 0.00 0.00 0.00 3.09
3008 3117 3.430374 GCATCCTTTGGTCTAACTCGCTA 60.430 47.826 0.00 0.00 0.00 4.26
3009 3118 2.678190 GCATCCTTTGGTCTAACTCGCT 60.678 50.000 0.00 0.00 0.00 4.93
3010 3119 1.666189 GCATCCTTTGGTCTAACTCGC 59.334 52.381 0.00 0.00 0.00 5.03
3011 3120 2.972625 TGCATCCTTTGGTCTAACTCG 58.027 47.619 0.00 0.00 0.00 4.18
3012 3121 4.154918 CACTTGCATCCTTTGGTCTAACTC 59.845 45.833 0.00 0.00 0.00 3.01
3013 3122 4.074970 CACTTGCATCCTTTGGTCTAACT 58.925 43.478 0.00 0.00 0.00 2.24
3014 3123 3.366374 GCACTTGCATCCTTTGGTCTAAC 60.366 47.826 0.00 0.00 41.59 2.34
3015 3124 2.819608 GCACTTGCATCCTTTGGTCTAA 59.180 45.455 0.00 0.00 41.59 2.10
3016 3125 2.436417 GCACTTGCATCCTTTGGTCTA 58.564 47.619 0.00 0.00 41.59 2.59
3017 3126 1.251251 GCACTTGCATCCTTTGGTCT 58.749 50.000 0.00 0.00 41.59 3.85
3018 3127 3.800628 GCACTTGCATCCTTTGGTC 57.199 52.632 0.00 0.00 41.59 4.02
3058 3167 1.072332 ACATAGTTGCACACCCGCA 59.928 52.632 0.00 0.00 41.03 5.69
3059 3168 1.234615 ACACATAGTTGCACACCCGC 61.235 55.000 0.00 0.00 0.00 6.13
3060 3169 1.234821 AACACATAGTTGCACACCCG 58.765 50.000 0.00 0.00 39.49 5.28
3061 3170 4.217550 ACAATAACACATAGTTGCACACCC 59.782 41.667 0.00 0.00 41.50 4.61
3062 3171 5.371115 ACAATAACACATAGTTGCACACC 57.629 39.130 0.00 0.00 41.50 4.16
3063 3172 5.563751 CGAACAATAACACATAGTTGCACAC 59.436 40.000 0.00 0.00 41.50 3.82
3064 3173 5.334491 CCGAACAATAACACATAGTTGCACA 60.334 40.000 0.00 0.00 41.50 4.57
3065 3174 5.086058 CCGAACAATAACACATAGTTGCAC 58.914 41.667 0.00 0.00 41.50 4.57
3066 3175 4.757657 ACCGAACAATAACACATAGTTGCA 59.242 37.500 0.00 0.00 41.50 4.08
3067 3176 5.291293 ACCGAACAATAACACATAGTTGC 57.709 39.130 0.00 0.00 41.50 4.17
3068 3177 6.083630 CCAACCGAACAATAACACATAGTTG 58.916 40.000 0.00 0.00 41.50 3.16
3069 3178 5.335348 GCCAACCGAACAATAACACATAGTT 60.335 40.000 0.00 0.00 44.27 2.24
3070 3179 4.155280 GCCAACCGAACAATAACACATAGT 59.845 41.667 0.00 0.00 0.00 2.12
3071 3180 4.394920 AGCCAACCGAACAATAACACATAG 59.605 41.667 0.00 0.00 0.00 2.23
3072 3181 4.155099 CAGCCAACCGAACAATAACACATA 59.845 41.667 0.00 0.00 0.00 2.29
3073 3182 3.057596 CAGCCAACCGAACAATAACACAT 60.058 43.478 0.00 0.00 0.00 3.21
3074 3183 2.292016 CAGCCAACCGAACAATAACACA 59.708 45.455 0.00 0.00 0.00 3.72
3075 3184 2.920647 GCAGCCAACCGAACAATAACAC 60.921 50.000 0.00 0.00 0.00 3.32
3076 3185 1.268352 GCAGCCAACCGAACAATAACA 59.732 47.619 0.00 0.00 0.00 2.41
3077 3186 1.268352 TGCAGCCAACCGAACAATAAC 59.732 47.619 0.00 0.00 0.00 1.89
3078 3187 1.610363 TGCAGCCAACCGAACAATAA 58.390 45.000 0.00 0.00 0.00 1.40
3079 3188 1.539388 CTTGCAGCCAACCGAACAATA 59.461 47.619 0.00 0.00 0.00 1.90
3080 3189 0.314935 CTTGCAGCCAACCGAACAAT 59.685 50.000 0.00 0.00 0.00 2.71
3081 3190 0.749818 TCTTGCAGCCAACCGAACAA 60.750 50.000 0.00 0.00 0.00 2.83
3082 3191 1.153066 TCTTGCAGCCAACCGAACA 60.153 52.632 0.00 0.00 0.00 3.18
3083 3192 0.884704 TCTCTTGCAGCCAACCGAAC 60.885 55.000 0.00 0.00 0.00 3.95
3084 3193 0.036732 ATCTCTTGCAGCCAACCGAA 59.963 50.000 0.00 0.00 0.00 4.30
3085 3194 0.036732 AATCTCTTGCAGCCAACCGA 59.963 50.000 0.00 0.00 0.00 4.69
3086 3195 0.169672 CAATCTCTTGCAGCCAACCG 59.830 55.000 0.00 0.00 0.00 4.44
3096 3205 3.861276 TGCTTTGGATGCAATCTCTTG 57.139 42.857 0.00 0.00 44.71 3.02
3097 3206 4.710375 AGAATGCTTTGGATGCAATCTCTT 59.290 37.500 0.00 0.00 44.44 2.85
3098 3207 4.098044 CAGAATGCTTTGGATGCAATCTCT 59.902 41.667 0.00 0.00 44.44 3.10
3099 3208 4.360563 CAGAATGCTTTGGATGCAATCTC 58.639 43.478 0.00 0.00 44.44 2.75
3101 3210 3.118884 ACCAGAATGCTTTGGATGCAATC 60.119 43.478 0.00 0.00 44.01 2.67
3102 3211 2.835764 ACCAGAATGCTTTGGATGCAAT 59.164 40.909 0.00 0.00 44.01 3.56
3103 3212 2.250031 ACCAGAATGCTTTGGATGCAA 58.750 42.857 0.00 0.00 44.01 4.08
3104 3213 1.927487 ACCAGAATGCTTTGGATGCA 58.073 45.000 0.00 0.00 44.95 3.96
3105 3214 3.065925 GTCTACCAGAATGCTTTGGATGC 59.934 47.826 0.00 0.00 37.89 3.91
3106 3215 4.521146 AGTCTACCAGAATGCTTTGGATG 58.479 43.478 0.00 0.00 37.89 3.51
3107 3216 4.851639 AGTCTACCAGAATGCTTTGGAT 57.148 40.909 0.00 0.00 37.89 3.41
3108 3217 5.425217 TCATAGTCTACCAGAATGCTTTGGA 59.575 40.000 0.00 0.00 37.89 3.53
3109 3218 5.674525 TCATAGTCTACCAGAATGCTTTGG 58.325 41.667 0.00 0.00 40.38 3.28
3110 3219 6.344500 ACTCATAGTCTACCAGAATGCTTTG 58.656 40.000 0.00 0.00 31.97 2.77
3111 3220 6.552445 ACTCATAGTCTACCAGAATGCTTT 57.448 37.500 0.00 0.00 31.97 3.51
3112 3221 6.552445 AACTCATAGTCTACCAGAATGCTT 57.448 37.500 0.00 0.00 31.97 3.91
3113 3222 7.847711 ATAACTCATAGTCTACCAGAATGCT 57.152 36.000 0.00 0.00 31.97 3.79
3114 3223 9.579768 CATATAACTCATAGTCTACCAGAATGC 57.420 37.037 0.00 0.00 31.97 3.56
3124 3233 9.352191 ACCGACTTTACATATAACTCATAGTCT 57.648 33.333 0.00 0.00 0.00 3.24
3142 3251 8.788806 TGTGAAATAATGAAATGTACCGACTTT 58.211 29.630 0.00 0.00 0.00 2.66
3143 3252 8.330466 TGTGAAATAATGAAATGTACCGACTT 57.670 30.769 0.00 0.00 0.00 3.01
3144 3253 7.915293 TGTGAAATAATGAAATGTACCGACT 57.085 32.000 0.00 0.00 0.00 4.18
3147 3256 9.995957 TGTTATGTGAAATAATGAAATGTACCG 57.004 29.630 0.00 0.00 0.00 4.02
3160 3269 9.955208 GCAGAATCATGATTGTTATGTGAAATA 57.045 29.630 25.37 0.00 0.00 1.40
3161 3270 7.646526 CGCAGAATCATGATTGTTATGTGAAAT 59.353 33.333 25.37 0.00 0.00 2.17
3162 3271 6.968335 CGCAGAATCATGATTGTTATGTGAAA 59.032 34.615 25.37 0.00 0.00 2.69
3163 3272 6.458615 CCGCAGAATCATGATTGTTATGTGAA 60.459 38.462 25.37 0.00 0.00 3.18
3164 3273 5.007921 CCGCAGAATCATGATTGTTATGTGA 59.992 40.000 25.37 0.00 0.00 3.58
3165 3274 5.209977 CCGCAGAATCATGATTGTTATGTG 58.790 41.667 25.37 20.52 0.00 3.21
3166 3275 4.261322 GCCGCAGAATCATGATTGTTATGT 60.261 41.667 25.37 0.00 0.00 2.29
3167 3276 4.224433 GCCGCAGAATCATGATTGTTATG 58.776 43.478 25.37 17.33 0.00 1.90
3168 3277 3.884693 TGCCGCAGAATCATGATTGTTAT 59.115 39.130 25.37 0.45 0.00 1.89
3169 3278 3.277715 TGCCGCAGAATCATGATTGTTA 58.722 40.909 25.37 2.96 0.00 2.41
3170 3279 2.093890 TGCCGCAGAATCATGATTGTT 58.906 42.857 25.37 10.58 0.00 2.83
3171 3280 1.753930 TGCCGCAGAATCATGATTGT 58.246 45.000 25.37 18.70 0.00 2.71
3172 3281 2.855660 TTGCCGCAGAATCATGATTG 57.144 45.000 25.37 13.85 0.00 2.67
3173 3282 2.492881 TGTTTGCCGCAGAATCATGATT 59.507 40.909 20.85 20.85 0.00 2.57
3174 3283 2.093890 TGTTTGCCGCAGAATCATGAT 58.906 42.857 1.18 1.18 0.00 2.45
3175 3284 1.532523 TGTTTGCCGCAGAATCATGA 58.467 45.000 0.00 0.00 0.00 3.07
3176 3285 2.350899 TTGTTTGCCGCAGAATCATG 57.649 45.000 0.00 0.00 0.00 3.07
3177 3286 3.056678 TGATTTGTTTGCCGCAGAATCAT 60.057 39.130 14.37 0.00 30.93 2.45
3178 3287 2.295629 TGATTTGTTTGCCGCAGAATCA 59.704 40.909 14.37 14.37 32.79 2.57
3179 3288 2.945278 TGATTTGTTTGCCGCAGAATC 58.055 42.857 0.00 3.98 0.00 2.52
3180 3289 3.598019 ATGATTTGTTTGCCGCAGAAT 57.402 38.095 0.00 0.00 0.00 2.40
3181 3290 4.082300 ACATATGATTTGTTTGCCGCAGAA 60.082 37.500 10.38 0.00 0.00 3.02
3182 3291 3.443329 ACATATGATTTGTTTGCCGCAGA 59.557 39.130 10.38 0.00 0.00 4.26
3183 3292 3.772932 ACATATGATTTGTTTGCCGCAG 58.227 40.909 10.38 0.00 0.00 5.18
3184 3293 3.192212 TGACATATGATTTGTTTGCCGCA 59.808 39.130 10.38 0.00 0.00 5.69
3185 3294 3.768406 TGACATATGATTTGTTTGCCGC 58.232 40.909 10.38 0.00 0.00 6.53
3186 3295 5.233957 TCTGACATATGATTTGTTTGCCG 57.766 39.130 10.38 0.00 0.00 5.69
3187 3296 5.517770 GCTTCTGACATATGATTTGTTTGCC 59.482 40.000 10.38 0.00 0.00 4.52
3188 3297 5.228635 CGCTTCTGACATATGATTTGTTTGC 59.771 40.000 10.38 3.45 0.00 3.68
3189 3298 6.545508 TCGCTTCTGACATATGATTTGTTTG 58.454 36.000 10.38 0.00 0.00 2.93
3190 3299 6.372659 ACTCGCTTCTGACATATGATTTGTTT 59.627 34.615 10.38 0.00 0.00 2.83
3191 3300 5.877012 ACTCGCTTCTGACATATGATTTGTT 59.123 36.000 10.38 0.00 0.00 2.83
3192 3301 5.423015 ACTCGCTTCTGACATATGATTTGT 58.577 37.500 10.38 0.00 0.00 2.83
3193 3302 5.980698 ACTCGCTTCTGACATATGATTTG 57.019 39.130 10.38 0.00 0.00 2.32
3194 3303 5.877012 ACAACTCGCTTCTGACATATGATTT 59.123 36.000 10.38 0.00 0.00 2.17
3195 3304 5.423015 ACAACTCGCTTCTGACATATGATT 58.577 37.500 10.38 0.00 0.00 2.57
3196 3305 5.016051 ACAACTCGCTTCTGACATATGAT 57.984 39.130 10.38 0.00 0.00 2.45
3197 3306 4.456280 ACAACTCGCTTCTGACATATGA 57.544 40.909 10.38 0.00 0.00 2.15
3198 3307 4.726021 GCAACAACTCGCTTCTGACATATG 60.726 45.833 0.00 0.00 0.00 1.78
3199 3308 3.372206 GCAACAACTCGCTTCTGACATAT 59.628 43.478 0.00 0.00 0.00 1.78
3200 3309 2.736721 GCAACAACTCGCTTCTGACATA 59.263 45.455 0.00 0.00 0.00 2.29
3201 3310 1.532868 GCAACAACTCGCTTCTGACAT 59.467 47.619 0.00 0.00 0.00 3.06
3202 3311 0.937304 GCAACAACTCGCTTCTGACA 59.063 50.000 0.00 0.00 0.00 3.58
3203 3312 0.937304 TGCAACAACTCGCTTCTGAC 59.063 50.000 0.00 0.00 0.00 3.51
3204 3313 1.220529 CTGCAACAACTCGCTTCTGA 58.779 50.000 0.00 0.00 0.00 3.27
3205 3314 0.385223 GCTGCAACAACTCGCTTCTG 60.385 55.000 0.00 0.00 0.00 3.02
3206 3315 1.835483 CGCTGCAACAACTCGCTTCT 61.835 55.000 0.00 0.00 0.00 2.85
3207 3316 1.439365 CGCTGCAACAACTCGCTTC 60.439 57.895 0.00 0.00 0.00 3.86
3208 3317 0.878523 TACGCTGCAACAACTCGCTT 60.879 50.000 0.00 0.00 0.00 4.68
3209 3318 1.284982 CTACGCTGCAACAACTCGCT 61.285 55.000 0.00 0.00 0.00 4.93
3210 3319 1.130613 CTACGCTGCAACAACTCGC 59.869 57.895 0.00 0.00 0.00 5.03
3211 3320 0.435008 GTCTACGCTGCAACAACTCG 59.565 55.000 0.00 0.00 0.00 4.18
3212 3321 0.790814 GGTCTACGCTGCAACAACTC 59.209 55.000 0.00 0.00 0.00 3.01
3213 3322 0.944311 CGGTCTACGCTGCAACAACT 60.944 55.000 0.00 0.00 34.82 3.16
3214 3323 1.491563 CGGTCTACGCTGCAACAAC 59.508 57.895 0.00 0.00 34.82 3.32
3215 3324 1.666553 CCGGTCTACGCTGCAACAA 60.667 57.895 0.00 0.00 42.52 2.83
3216 3325 2.048597 CCGGTCTACGCTGCAACA 60.049 61.111 0.00 0.00 42.52 3.33
3217 3326 2.813908 CCCGGTCTACGCTGCAAC 60.814 66.667 0.00 0.00 42.52 4.17
3218 3327 4.077184 CCCCGGTCTACGCTGCAA 62.077 66.667 0.00 0.00 42.52 4.08
3220 3329 4.208686 CTCCCCGGTCTACGCTGC 62.209 72.222 0.00 0.00 42.52 5.25
3221 3330 3.528370 CCTCCCCGGTCTACGCTG 61.528 72.222 0.00 0.00 42.52 5.18
3222 3331 4.835891 CCCTCCCCGGTCTACGCT 62.836 72.222 0.00 0.00 42.52 5.07
3223 3332 4.828296 TCCCTCCCCGGTCTACGC 62.828 72.222 0.00 0.00 42.52 4.42
3224 3333 0.178981 TATTCCCTCCCCGGTCTACG 60.179 60.000 0.00 0.00 43.80 3.51
3225 3334 1.146566 TCTATTCCCTCCCCGGTCTAC 59.853 57.143 0.00 0.00 0.00 2.59
3226 3335 1.428139 CTCTATTCCCTCCCCGGTCTA 59.572 57.143 0.00 0.00 0.00 2.59
3227 3336 0.188834 CTCTATTCCCTCCCCGGTCT 59.811 60.000 0.00 0.00 0.00 3.85
3228 3337 0.187851 TCTCTATTCCCTCCCCGGTC 59.812 60.000 0.00 0.00 0.00 4.79
3229 3338 0.188834 CTCTCTATTCCCTCCCCGGT 59.811 60.000 0.00 0.00 0.00 5.28
3230 3339 0.483328 TCTCTCTATTCCCTCCCCGG 59.517 60.000 0.00 0.00 0.00 5.73
3231 3340 2.365941 GTTTCTCTCTATTCCCTCCCCG 59.634 54.545 0.00 0.00 0.00 5.73
3232 3341 3.385115 TGTTTCTCTCTATTCCCTCCCC 58.615 50.000 0.00 0.00 0.00 4.81
3233 3342 3.389656 CCTGTTTCTCTCTATTCCCTCCC 59.610 52.174 0.00 0.00 0.00 4.30
3234 3343 3.389656 CCCTGTTTCTCTCTATTCCCTCC 59.610 52.174 0.00 0.00 0.00 4.30
3235 3344 3.389656 CCCCTGTTTCTCTCTATTCCCTC 59.610 52.174 0.00 0.00 0.00 4.30
3236 3345 3.388913 CCCCTGTTTCTCTCTATTCCCT 58.611 50.000 0.00 0.00 0.00 4.20
3237 3346 2.439880 CCCCCTGTTTCTCTCTATTCCC 59.560 54.545 0.00 0.00 0.00 3.97
3238 3347 2.158740 GCCCCCTGTTTCTCTCTATTCC 60.159 54.545 0.00 0.00 0.00 3.01
3239 3348 2.483889 CGCCCCCTGTTTCTCTCTATTC 60.484 54.545 0.00 0.00 0.00 1.75
3240 3349 1.486726 CGCCCCCTGTTTCTCTCTATT 59.513 52.381 0.00 0.00 0.00 1.73
3241 3350 1.123928 CGCCCCCTGTTTCTCTCTAT 58.876 55.000 0.00 0.00 0.00 1.98
3242 3351 0.040646 TCGCCCCCTGTTTCTCTCTA 59.959 55.000 0.00 0.00 0.00 2.43
3243 3352 0.836400 TTCGCCCCCTGTTTCTCTCT 60.836 55.000 0.00 0.00 0.00 3.10
3244 3353 0.253327 ATTCGCCCCCTGTTTCTCTC 59.747 55.000 0.00 0.00 0.00 3.20
3245 3354 1.580059 TATTCGCCCCCTGTTTCTCT 58.420 50.000 0.00 0.00 0.00 3.10
3246 3355 2.158813 TGATATTCGCCCCCTGTTTCTC 60.159 50.000 0.00 0.00 0.00 2.87
3247 3356 1.843851 TGATATTCGCCCCCTGTTTCT 59.156 47.619 0.00 0.00 0.00 2.52
3248 3357 2.341846 TGATATTCGCCCCCTGTTTC 57.658 50.000 0.00 0.00 0.00 2.78
3249 3358 2.091885 ACATGATATTCGCCCCCTGTTT 60.092 45.455 0.00 0.00 0.00 2.83
3250 3359 1.494721 ACATGATATTCGCCCCCTGTT 59.505 47.619 0.00 0.00 0.00 3.16
3251 3360 1.140312 ACATGATATTCGCCCCCTGT 58.860 50.000 0.00 0.00 0.00 4.00
3252 3361 1.881973 CAACATGATATTCGCCCCCTG 59.118 52.381 0.00 0.00 0.00 4.45
3253 3362 1.774254 TCAACATGATATTCGCCCCCT 59.226 47.619 0.00 0.00 0.00 4.79
3254 3363 2.270352 TCAACATGATATTCGCCCCC 57.730 50.000 0.00 0.00 0.00 5.40
3255 3364 3.438087 CAGATCAACATGATATTCGCCCC 59.562 47.826 0.00 0.00 37.20 5.80
3256 3365 4.318332 TCAGATCAACATGATATTCGCCC 58.682 43.478 0.00 0.00 37.20 6.13
3257 3366 5.163784 CCATCAGATCAACATGATATTCGCC 60.164 44.000 0.00 0.00 37.20 5.54
3258 3367 5.410746 ACCATCAGATCAACATGATATTCGC 59.589 40.000 0.00 0.00 37.20 4.70
3259 3368 6.647895 TCACCATCAGATCAACATGATATTCG 59.352 38.462 0.00 0.00 37.20 3.34
3260 3369 7.974482 TCACCATCAGATCAACATGATATTC 57.026 36.000 0.00 0.00 37.20 1.75
3261 3370 7.094334 GCATCACCATCAGATCAACATGATATT 60.094 37.037 0.00 0.00 37.20 1.28
3262 3371 6.374613 GCATCACCATCAGATCAACATGATAT 59.625 38.462 0.00 0.00 37.20 1.63
3263 3372 5.704053 GCATCACCATCAGATCAACATGATA 59.296 40.000 0.00 0.00 37.20 2.15
3264 3373 4.519350 GCATCACCATCAGATCAACATGAT 59.481 41.667 0.00 0.00 40.34 2.45
3265 3374 3.881089 GCATCACCATCAGATCAACATGA 59.119 43.478 0.00 0.00 0.00 3.07
3266 3375 3.004419 GGCATCACCATCAGATCAACATG 59.996 47.826 0.00 0.00 38.86 3.21
3267 3376 3.220110 GGCATCACCATCAGATCAACAT 58.780 45.455 0.00 0.00 38.86 2.71
3268 3377 2.026075 TGGCATCACCATCAGATCAACA 60.026 45.455 0.00 0.00 46.36 3.33
3269 3378 2.646930 TGGCATCACCATCAGATCAAC 58.353 47.619 0.00 0.00 46.36 3.18
3282 3391 3.933879 ACGTCTTGTGATGGCATCA 57.066 47.368 25.63 25.63 36.84 3.07
3292 3401 4.974368 TTGAAACAAATCCACGTCTTGT 57.026 36.364 0.00 0.00 34.81 3.16
3293 3402 5.518812 TCATTGAAACAAATCCACGTCTTG 58.481 37.500 0.00 0.00 0.00 3.02
3294 3403 5.766150 TCATTGAAACAAATCCACGTCTT 57.234 34.783 0.00 0.00 0.00 3.01
3295 3404 5.766150 TTCATTGAAACAAATCCACGTCT 57.234 34.783 0.00 0.00 0.00 4.18
3296 3405 5.164061 GCATTCATTGAAACAAATCCACGTC 60.164 40.000 2.68 0.00 0.00 4.34
3297 3406 4.685628 GCATTCATTGAAACAAATCCACGT 59.314 37.500 2.68 0.00 0.00 4.49
3298 3407 4.925054 AGCATTCATTGAAACAAATCCACG 59.075 37.500 2.68 0.00 0.00 4.94
3299 3408 6.790285 AAGCATTCATTGAAACAAATCCAC 57.210 33.333 2.68 0.00 0.00 4.02
3300 3409 9.504708 AATAAAGCATTCATTGAAACAAATCCA 57.495 25.926 2.68 0.00 0.00 3.41
3301 3410 9.763465 CAATAAAGCATTCATTGAAACAAATCC 57.237 29.630 2.68 0.00 35.70 3.01
3302 3411 9.269415 GCAATAAAGCATTCATTGAAACAAATC 57.731 29.630 2.68 0.00 35.70 2.17
3303 3412 9.005777 AGCAATAAAGCATTCATTGAAACAAAT 57.994 25.926 2.68 0.00 35.70 2.32
3304 3413 8.380743 AGCAATAAAGCATTCATTGAAACAAA 57.619 26.923 2.68 0.00 35.70 2.83
3305 3414 7.966246 AGCAATAAAGCATTCATTGAAACAA 57.034 28.000 2.68 0.00 35.70 2.83
3306 3415 7.966246 AAGCAATAAAGCATTCATTGAAACA 57.034 28.000 2.68 0.00 35.70 2.83
3307 3416 8.497554 TCAAAGCAATAAAGCATTCATTGAAAC 58.502 29.630 2.68 0.00 35.70 2.78
3308 3417 8.604640 TCAAAGCAATAAAGCATTCATTGAAA 57.395 26.923 2.68 0.00 35.70 2.69
3309 3418 8.604640 TTCAAAGCAATAAAGCATTCATTGAA 57.395 26.923 0.75 0.75 35.70 2.69
3310 3419 8.604640 TTTCAAAGCAATAAAGCATTCATTGA 57.395 26.923 0.00 0.00 35.70 2.57
3311 3420 7.960738 CCTTTCAAAGCAATAAAGCATTCATTG 59.039 33.333 0.00 0.00 36.77 2.82
3312 3421 7.120138 CCCTTTCAAAGCAATAAAGCATTCATT 59.880 33.333 0.00 0.00 36.85 2.57
3313 3422 6.596497 CCCTTTCAAAGCAATAAAGCATTCAT 59.404 34.615 0.00 0.00 36.85 2.57
3314 3423 5.933463 CCCTTTCAAAGCAATAAAGCATTCA 59.067 36.000 0.00 0.00 36.85 2.57
3315 3424 5.352293 CCCCTTTCAAAGCAATAAAGCATTC 59.648 40.000 0.00 0.00 36.85 2.67
3316 3425 5.221904 ACCCCTTTCAAAGCAATAAAGCATT 60.222 36.000 0.00 0.00 36.85 3.56
3317 3426 4.286808 ACCCCTTTCAAAGCAATAAAGCAT 59.713 37.500 0.00 0.00 36.85 3.79
3318 3427 3.645687 ACCCCTTTCAAAGCAATAAAGCA 59.354 39.130 0.00 0.00 36.85 3.91
3319 3428 3.996363 CACCCCTTTCAAAGCAATAAAGC 59.004 43.478 0.00 0.00 0.00 3.51
3320 3429 3.996363 GCACCCCTTTCAAAGCAATAAAG 59.004 43.478 0.00 0.00 0.00 1.85
3321 3430 3.645687 AGCACCCCTTTCAAAGCAATAAA 59.354 39.130 0.00 0.00 0.00 1.40
3322 3431 3.238597 AGCACCCCTTTCAAAGCAATAA 58.761 40.909 0.00 0.00 0.00 1.40
3323 3432 2.888212 AGCACCCCTTTCAAAGCAATA 58.112 42.857 0.00 0.00 0.00 1.90
3324 3433 1.720781 AGCACCCCTTTCAAAGCAAT 58.279 45.000 0.00 0.00 0.00 3.56
3325 3434 1.494960 AAGCACCCCTTTCAAAGCAA 58.505 45.000 0.00 0.00 0.00 3.91
3326 3435 2.238521 CTAAGCACCCCTTTCAAAGCA 58.761 47.619 0.00 0.00 34.95 3.91
3327 3436 2.029918 CACTAAGCACCCCTTTCAAAGC 60.030 50.000 0.00 0.00 34.95 3.51
3328 3437 3.222603 ACACTAAGCACCCCTTTCAAAG 58.777 45.455 0.00 0.00 34.95 2.77
3329 3438 3.117663 AGACACTAAGCACCCCTTTCAAA 60.118 43.478 0.00 0.00 34.95 2.69
3330 3439 2.441750 AGACACTAAGCACCCCTTTCAA 59.558 45.455 0.00 0.00 34.95 2.69
3331 3440 2.054799 AGACACTAAGCACCCCTTTCA 58.945 47.619 0.00 0.00 34.95 2.69
3332 3441 2.427506 CAGACACTAAGCACCCCTTTC 58.572 52.381 0.00 0.00 34.95 2.62
3333 3442 1.073923 CCAGACACTAAGCACCCCTTT 59.926 52.381 0.00 0.00 34.95 3.11
3334 3443 0.693049 CCAGACACTAAGCACCCCTT 59.307 55.000 0.00 0.00 37.57 3.95
3335 3444 1.842381 GCCAGACACTAAGCACCCCT 61.842 60.000 0.00 0.00 0.00 4.79
3336 3445 1.377333 GCCAGACACTAAGCACCCC 60.377 63.158 0.00 0.00 0.00 4.95
3337 3446 1.741770 CGCCAGACACTAAGCACCC 60.742 63.158 0.00 0.00 0.00 4.61
3338 3447 1.004918 ACGCCAGACACTAAGCACC 60.005 57.895 0.00 0.00 0.00 5.01
3339 3448 0.319555 TGACGCCAGACACTAAGCAC 60.320 55.000 0.00 0.00 0.00 4.40
3340 3449 0.391228 TTGACGCCAGACACTAAGCA 59.609 50.000 0.00 0.00 0.00 3.91
3341 3450 1.661112 GATTGACGCCAGACACTAAGC 59.339 52.381 0.00 0.00 0.00 3.09
3342 3451 2.093973 AGGATTGACGCCAGACACTAAG 60.094 50.000 0.00 0.00 0.00 2.18
3343 3452 1.899814 AGGATTGACGCCAGACACTAA 59.100 47.619 0.00 0.00 0.00 2.24
3344 3453 1.557099 AGGATTGACGCCAGACACTA 58.443 50.000 0.00 0.00 0.00 2.74
3345 3454 0.687354 AAGGATTGACGCCAGACACT 59.313 50.000 0.00 0.00 0.00 3.55
3351 3460 3.691575 TGGAATAAAAGGATTGACGCCA 58.308 40.909 0.00 0.00 0.00 5.69
3357 3466 5.945784 TCTGACACCTGGAATAAAAGGATTG 59.054 40.000 0.00 0.00 37.01 2.67
3360 3469 4.349636 TGTCTGACACCTGGAATAAAAGGA 59.650 41.667 6.36 0.00 37.01 3.36
3390 3499 8.404765 AGAATCACGATGAGCATGTAGATATAG 58.595 37.037 0.00 0.00 0.00 1.31
3394 3503 5.221402 ACAGAATCACGATGAGCATGTAGAT 60.221 40.000 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.