Multiple sequence alignment - TraesCS3D01G382400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G382400 chr3D 100.000 4129 0 0 1 4129 498115359 498119487 0.000000e+00 7625.0
1 TraesCS3D01G382400 chr3D 81.688 770 85 28 2287 3028 519384628 519383887 1.280000e-164 590.0
2 TraesCS3D01G382400 chr3D 90.301 299 24 4 2805 3100 498138935 498139231 1.800000e-103 387.0
3 TraesCS3D01G382400 chr3D 89.302 215 22 1 2271 2484 519378911 519378697 6.800000e-68 268.0
4 TraesCS3D01G382400 chr3D 83.333 132 16 5 3395 3522 447575044 447574915 2.610000e-22 117.0
5 TraesCS3D01G382400 chr3D 95.918 49 2 0 3394 3442 292372796 292372748 3.420000e-11 80.5
6 TraesCS3D01G382400 chr3D 100.000 29 0 0 3401 3429 292372542 292372570 2.000000e-03 54.7
7 TraesCS3D01G382400 chr3B 92.782 3117 155 31 1 3070 659075883 659078976 0.000000e+00 4446.0
8 TraesCS3D01G382400 chr3B 83.588 786 91 20 2271 3028 684109504 684108729 0.000000e+00 702.0
9 TraesCS3D01G382400 chr3B 83.462 520 69 12 2528 3041 683786694 683786186 6.250000e-128 468.0
10 TraesCS3D01G382400 chr3B 79.160 595 76 28 2549 3128 684064977 684064416 6.520000e-98 368.0
11 TraesCS3D01G382400 chr3B 87.748 302 31 4 2271 2567 684060025 684059725 8.500000e-92 348.0
12 TraesCS3D01G382400 chr3B 84.416 231 32 3 2324 2554 684066578 684066352 1.490000e-54 224.0
13 TraesCS3D01G382400 chr3B 97.561 82 2 0 3889 3970 51909562 51909643 1.550000e-29 141.0
14 TraesCS3D01G382400 chr3B 88.182 110 9 3 3889 3997 113505237 113505131 1.200000e-25 128.0
15 TraesCS3D01G382400 chr3B 94.737 57 3 0 2271 2327 684066813 684066757 5.690000e-14 89.8
16 TraesCS3D01G382400 chr3B 82.927 82 13 1 3390 3471 236510605 236510525 5.730000e-09 73.1
17 TraesCS3D01G382400 chr3A 94.923 2521 93 16 588 3103 635787767 635785277 0.000000e+00 3914.0
18 TraesCS3D01G382400 chr3A 90.227 2732 196 33 588 3274 636128580 636125875 0.000000e+00 3500.0
19 TraesCS3D01G382400 chr3A 84.010 788 88 20 2274 3028 654396397 654395615 0.000000e+00 723.0
20 TraesCS3D01G382400 chr3A 80.098 407 56 13 1 401 636153467 636153080 3.140000e-71 279.0
21 TraesCS3D01G382400 chr3A 86.528 193 23 3 2651 2841 654400396 654400205 4.180000e-50 209.0
22 TraesCS3D01G382400 chr3A 92.308 78 5 1 3172 3248 635785275 635785198 4.360000e-20 110.0
23 TraesCS3D01G382400 chr3A 81.818 132 20 4 3402 3530 589200430 589200300 1.570000e-19 108.0
24 TraesCS3D01G382400 chr3A 78.523 149 26 5 3397 3540 635340982 635341129 4.390000e-15 93.5
25 TraesCS3D01G382400 chr3A 85.714 77 11 0 3394 3470 186047770 186047694 9.510000e-12 82.4
26 TraesCS3D01G382400 chr3A 82.979 94 10 3 4027 4120 636123164 636123077 3.420000e-11 80.5
27 TraesCS3D01G382400 chr3A 90.000 60 6 0 3394 3453 681462788 681462847 1.230000e-10 78.7
28 TraesCS3D01G382400 chr6A 85.567 291 34 4 1782 2071 85594131 85594414 8.680000e-77 298.0
29 TraesCS3D01G382400 chr7D 96.522 115 4 0 3533 3647 174803143 174803257 1.510000e-44 191.0
30 TraesCS3D01G382400 chr7D 94.309 123 4 3 3539 3659 370063025 370062904 7.050000e-43 185.0
31 TraesCS3D01G382400 chr2B 95.763 118 5 0 3531 3648 171459967 171460084 1.510000e-44 191.0
32 TraesCS3D01G382400 chr2B 94.262 122 7 0 3533 3654 494265411 494265532 1.960000e-43 187.0
33 TraesCS3D01G382400 chr2D 93.701 127 6 2 3535 3659 627971623 627971497 5.450000e-44 189.0
34 TraesCS3D01G382400 chr2D 87.719 114 8 3 3889 3996 205184636 205184523 1.200000e-25 128.0
35 TraesCS3D01G382400 chr2A 96.491 114 4 0 3535 3648 79319263 79319150 5.450000e-44 189.0
36 TraesCS3D01G382400 chr2A 89.815 108 9 1 3889 3996 141164400 141164295 2.000000e-28 137.0
37 TraesCS3D01G382400 chr1D 94.309 123 7 0 3535 3657 11489782 11489660 5.450000e-44 189.0
38 TraesCS3D01G382400 chr1D 93.750 48 2 1 3394 3441 474085349 474085303 2.060000e-08 71.3
39 TraesCS3D01G382400 chr4A 94.958 119 6 0 3529 3647 655433723 655433841 1.960000e-43 187.0
40 TraesCS3D01G382400 chr4A 92.754 69 5 0 3461 3529 659436433 659436365 2.630000e-17 100.0
41 TraesCS3D01G382400 chr4A 92.754 69 5 0 3461 3529 659499406 659499338 2.630000e-17 100.0
42 TraesCS3D01G382400 chr4A 79.562 137 26 1 3394 3528 42777566 42777430 3.400000e-16 97.1
43 TraesCS3D01G382400 chr4A 96.296 54 2 0 3477 3530 660086013 660085960 5.690000e-14 89.8
44 TraesCS3D01G382400 chr5B 92.248 129 6 4 3528 3655 710922513 710922388 3.280000e-41 180.0
45 TraesCS3D01G382400 chr5B 93.333 60 4 0 3394 3453 190119374 190119433 5.690000e-14 89.8
46 TraesCS3D01G382400 chr5B 88.333 60 7 0 3394 3453 43827466 43827525 5.730000e-09 73.1
47 TraesCS3D01G382400 chr6B 90.090 111 5 3 3889 3993 350784926 350785036 5.570000e-29 139.0
48 TraesCS3D01G382400 chr7A 88.235 119 7 5 3889 4000 15099101 15098983 7.200000e-28 135.0
49 TraesCS3D01G382400 chr7A 94.872 39 1 1 2034 2071 399211773 399211735 4.460000e-05 60.2
50 TraesCS3D01G382400 chr1B 88.793 116 5 6 3889 3996 505613830 505613715 7.200000e-28 135.0
51 TraesCS3D01G382400 chr1B 89.320 103 7 3 3889 3990 53053834 53053735 4.330000e-25 126.0
52 TraesCS3D01G382400 chr4B 87.826 115 8 3 3889 3997 665345960 665345846 3.350000e-26 130.0
53 TraesCS3D01G382400 chr4D 81.429 140 24 1 3391 3528 421340073 421340212 3.370000e-21 113.0
54 TraesCS3D01G382400 chr5A 96.154 52 2 0 3394 3445 232834251 232834302 7.350000e-13 86.1
55 TraesCS3D01G382400 chr5D 91.837 49 4 0 3394 3442 195650686 195650734 7.410000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G382400 chr3D 498115359 498119487 4128 False 7625.000000 7625 100.000000 1 4129 1 chr3D.!!$F2 4128
1 TraesCS3D01G382400 chr3D 519383887 519384628 741 True 590.000000 590 81.688000 2287 3028 1 chr3D.!!$R4 741
2 TraesCS3D01G382400 chr3B 659075883 659078976 3093 False 4446.000000 4446 92.782000 1 3070 1 chr3B.!!$F2 3069
3 TraesCS3D01G382400 chr3B 684108729 684109504 775 True 702.000000 702 83.588000 2271 3028 1 chr3B.!!$R5 757
4 TraesCS3D01G382400 chr3B 683786186 683786694 508 True 468.000000 468 83.462000 2528 3041 1 chr3B.!!$R3 513
5 TraesCS3D01G382400 chr3B 684064416 684066813 2397 True 227.266667 368 86.104333 2271 3128 3 chr3B.!!$R6 857
6 TraesCS3D01G382400 chr3A 635785198 635787767 2569 True 2012.000000 3914 93.615500 588 3248 2 chr3A.!!$R4 2660
7 TraesCS3D01G382400 chr3A 636123077 636128580 5503 True 1790.250000 3500 86.603000 588 4120 2 chr3A.!!$R5 3532
8 TraesCS3D01G382400 chr3A 654395615 654400396 4781 True 466.000000 723 85.269000 2274 3028 2 chr3A.!!$R6 754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 279 0.247460 CATCAGCTCACCTCCAACGA 59.753 55.0 0.00 0.00 0.0 3.85 F
1881 1941 0.109597 CATTGGAGTGTTTGCGCCTC 60.110 55.0 4.18 3.08 0.0 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2013 2073 0.325860 TAATGGGTACGGCCTGACCT 60.326 55.0 19.32 5.83 35.91 3.85 R
3746 7155 0.174845 CATGGTTCGCCCTCGACTTA 59.825 55.0 0.00 0.00 45.43 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 8.815141 AAAATTACAATACAACCGGTTTTACC 57.185 30.769 19.55 0.00 34.05 2.85
166 168 1.935873 CGCCTCATGGTATGAACACAG 59.064 52.381 0.00 0.00 39.11 3.66
199 201 0.804544 GCAGCACGTCGTAGCCATTA 60.805 55.000 13.70 0.00 0.00 1.90
210 212 1.363145 TAGCCATTACGGTTGCACGC 61.363 55.000 0.00 0.00 37.37 5.34
215 217 1.087771 ATTACGGTTGCACGCCTAGC 61.088 55.000 5.13 0.00 37.37 3.42
221 223 1.965930 TTGCACGCCTAGCTTGGTG 60.966 57.895 23.69 23.69 42.85 4.17
223 225 2.391389 GCACGCCTAGCTTGGTGAC 61.391 63.158 30.45 18.97 39.82 3.67
229 231 1.168714 CCTAGCTTGGTGACCTTTGC 58.831 55.000 5.98 4.56 0.00 3.68
232 234 1.780503 AGCTTGGTGACCTTTGCTTT 58.219 45.000 2.11 0.00 0.00 3.51
273 275 0.622136 AATGCATCAGCTCACCTCCA 59.378 50.000 0.00 0.00 42.74 3.86
275 277 0.321919 TGCATCAGCTCACCTCCAAC 60.322 55.000 0.00 0.00 42.74 3.77
277 279 0.247460 CATCAGCTCACCTCCAACGA 59.753 55.000 0.00 0.00 0.00 3.85
309 335 2.036958 ACCGATCGGCATGAAAATGA 57.963 45.000 33.62 0.00 39.32 2.57
313 339 4.172505 CCGATCGGCATGAAAATGAAAAA 58.827 39.130 23.37 0.00 0.00 1.94
369 395 9.589111 GTTTTCAAGGTAGTTTTGTCCAAAATA 57.411 29.630 8.31 1.12 41.64 1.40
372 398 9.757227 TTCAAGGTAGTTTTGTCCAAAATATTG 57.243 29.630 8.31 9.00 41.64 1.90
373 399 7.870445 TCAAGGTAGTTTTGTCCAAAATATTGC 59.130 33.333 8.31 2.63 41.64 3.56
375 401 6.268847 AGGTAGTTTTGTCCAAAATATTGCCA 59.731 34.615 8.31 0.00 41.64 4.92
376 402 6.367695 GGTAGTTTTGTCCAAAATATTGCCAC 59.632 38.462 8.31 0.00 41.64 5.01
377 403 5.923204 AGTTTTGTCCAAAATATTGCCACA 58.077 33.333 8.31 0.00 41.64 4.17
378 404 6.532826 AGTTTTGTCCAAAATATTGCCACAT 58.467 32.000 8.31 0.00 41.64 3.21
386 413 6.040729 TCCAAAATATTGCCACATGGTGATAG 59.959 38.462 0.00 0.00 33.68 2.08
434 461 0.326264 GCCCATACAGCCCTGATAGG 59.674 60.000 1.69 0.76 34.30 2.57
712 743 1.400737 GGCCTCGTTAGCTTCCTAGA 58.599 55.000 0.00 0.00 0.00 2.43
758 790 1.067354 GTCCGTATCCAAACTGGTCGT 60.067 52.381 0.00 0.00 39.03 4.34
762 794 0.616371 TATCCAAACTGGTCGTGGGG 59.384 55.000 0.00 0.00 39.03 4.96
764 796 1.896660 CCAAACTGGTCGTGGGGTG 60.897 63.158 0.00 0.00 31.35 4.61
808 840 1.738099 CGAAGACAGGGAAGGCGTG 60.738 63.158 0.00 0.00 0.00 5.34
822 855 1.212751 GCGTGGATTTTGCTCACCC 59.787 57.895 0.00 0.00 0.00 4.61
825 858 1.339610 CGTGGATTTTGCTCACCCAAA 59.660 47.619 0.00 0.00 33.21 3.28
1398 1458 5.324409 TCCAATTTATGCTTTGACAGTCCT 58.676 37.500 0.00 0.00 0.00 3.85
1483 1543 1.473257 GCAGGTTCATCAGGCGTATCA 60.473 52.381 0.00 0.00 0.00 2.15
1488 1548 2.874701 GTTCATCAGGCGTATCAATGCT 59.125 45.455 0.00 0.00 37.78 3.79
1506 1566 1.771255 GCTATCCTGGAATCCCACAGT 59.229 52.381 0.00 0.00 37.58 3.55
1881 1941 0.109597 CATTGGAGTGTTTGCGCCTC 60.110 55.000 4.18 3.08 0.00 4.70
1920 1980 5.709164 ACTGCTTAATCTGAAAGTGCAGAAT 59.291 36.000 22.90 7.68 46.94 2.40
2013 2073 8.397906 CCGAATCTAGCAAAATTTGAGTATTCA 58.602 33.333 10.26 0.00 0.00 2.57
2023 2083 0.824109 TGAGTATTCAGGTCAGGCCG 59.176 55.000 0.00 0.00 43.70 6.13
2257 2319 6.252655 GCCATGTAAATATCGTTTTGTTGACC 59.747 38.462 0.00 0.00 0.00 4.02
2491 4405 2.038952 ACCATGTCTGCTTAGTGCTTGA 59.961 45.455 0.00 0.00 43.37 3.02
2756 6118 2.146342 CACCGTCATCTTGAGCAGTTT 58.854 47.619 0.00 0.00 0.00 2.66
2789 6155 4.161001 GGGTTTATCGGTCTAAGAGGTCAA 59.839 45.833 0.00 0.00 0.00 3.18
3166 6566 2.102420 TGTCTGAGAAAAGCTTGGTCGA 59.898 45.455 0.00 0.00 0.00 4.20
3192 6593 5.303259 TGTGCCAGCCATATGTAATCTTA 57.697 39.130 1.24 0.00 0.00 2.10
3249 6650 3.181456 GCCCTGCTGATTCAAGATACTCT 60.181 47.826 0.00 0.00 0.00 3.24
3250 6651 4.378774 CCCTGCTGATTCAAGATACTCTG 58.621 47.826 0.00 0.00 0.00 3.35
3252 6653 5.426504 CCTGCTGATTCAAGATACTCTGTT 58.573 41.667 0.00 0.00 0.00 3.16
3254 6655 6.041423 TGCTGATTCAAGATACTCTGTTCA 57.959 37.500 0.00 0.00 0.00 3.18
3269 6670 9.899226 ATACTCTGTTCATTTCTTTTACTTTGC 57.101 29.630 0.00 0.00 0.00 3.68
3270 6671 7.771183 ACTCTGTTCATTTCTTTTACTTTGCA 58.229 30.769 0.00 0.00 0.00 4.08
3271 6672 8.416329 ACTCTGTTCATTTCTTTTACTTTGCAT 58.584 29.630 0.00 0.00 0.00 3.96
3272 6673 9.897744 CTCTGTTCATTTCTTTTACTTTGCATA 57.102 29.630 0.00 0.00 0.00 3.14
3277 6678 9.859427 TTCATTTCTTTTACTTTGCATATCAGG 57.141 29.630 0.00 0.00 0.00 3.86
3278 6679 9.023962 TCATTTCTTTTACTTTGCATATCAGGT 57.976 29.630 0.00 0.00 0.00 4.00
3282 6683 8.365399 TCTTTTACTTTGCATATCAGGTATCG 57.635 34.615 0.00 0.00 0.00 2.92
3289 6690 5.386958 TGCATATCAGGTATCGTTAGGAC 57.613 43.478 0.00 0.00 0.00 3.85
3290 6691 5.077564 TGCATATCAGGTATCGTTAGGACT 58.922 41.667 0.00 0.00 0.00 3.85
3291 6692 5.048013 TGCATATCAGGTATCGTTAGGACTG 60.048 44.000 0.00 0.00 0.00 3.51
3294 6695 1.754803 CAGGTATCGTTAGGACTGGCA 59.245 52.381 0.00 0.00 0.00 4.92
3299 6700 3.627395 ATCGTTAGGACTGGCATTTGA 57.373 42.857 0.00 0.00 0.00 2.69
3301 6702 1.737793 CGTTAGGACTGGCATTTGACC 59.262 52.381 0.00 0.00 0.00 4.02
3302 6703 2.790433 GTTAGGACTGGCATTTGACCA 58.210 47.619 0.00 0.00 35.40 4.02
3314 6715 5.244851 TGGCATTTGACCAGCAATTACTTTA 59.755 36.000 0.00 0.00 36.15 1.85
3315 6716 6.070881 TGGCATTTGACCAGCAATTACTTTAT 60.071 34.615 0.00 0.00 36.15 1.40
3317 6718 7.978975 GGCATTTGACCAGCAATTACTTTATTA 59.021 33.333 0.00 0.00 36.15 0.98
3318 6719 9.364989 GCATTTGACCAGCAATTACTTTATTAA 57.635 29.630 0.00 0.00 36.15 1.40
3353 6754 9.467258 TTCTTGATTTTTGTAAAAGAGCATGAG 57.533 29.630 0.00 0.00 0.00 2.90
3354 6755 8.084073 TCTTGATTTTTGTAAAAGAGCATGAGG 58.916 33.333 0.00 0.00 0.00 3.86
3367 6776 1.541147 GCATGAGGCAAGCAAACTACA 59.459 47.619 0.00 0.00 43.97 2.74
3371 6780 2.483877 TGAGGCAAGCAAACTACATTCG 59.516 45.455 0.00 0.00 0.00 3.34
3383 6792 3.259064 ACTACATTCGTCCAAACCATCG 58.741 45.455 0.00 0.00 0.00 3.84
3385 6794 3.322211 ACATTCGTCCAAACCATCGTA 57.678 42.857 0.00 0.00 0.00 3.43
3386 6795 3.666274 ACATTCGTCCAAACCATCGTAA 58.334 40.909 0.00 0.00 0.00 3.18
3387 6796 3.682858 ACATTCGTCCAAACCATCGTAAG 59.317 43.478 0.00 0.00 0.00 2.34
3388 6797 3.389925 TTCGTCCAAACCATCGTAAGT 57.610 42.857 0.00 0.00 39.48 2.24
3389 6798 4.517952 TTCGTCCAAACCATCGTAAGTA 57.482 40.909 0.00 0.00 39.48 2.24
3390 6799 3.836949 TCGTCCAAACCATCGTAAGTAC 58.163 45.455 0.00 0.00 39.48 2.73
3392 6801 3.611113 CGTCCAAACCATCGTAAGTACTG 59.389 47.826 0.00 0.00 39.48 2.74
3393 6802 3.370061 GTCCAAACCATCGTAAGTACTGC 59.630 47.826 0.00 0.00 39.48 4.40
3394 6803 3.259876 TCCAAACCATCGTAAGTACTGCT 59.740 43.478 0.00 0.00 39.48 4.24
3395 6804 3.617263 CCAAACCATCGTAAGTACTGCTC 59.383 47.826 0.00 0.00 39.48 4.26
3396 6805 3.521947 AACCATCGTAAGTACTGCTCC 57.478 47.619 0.00 0.00 39.48 4.70
3397 6806 1.755380 ACCATCGTAAGTACTGCTCCC 59.245 52.381 0.00 0.00 39.48 4.30
3399 6808 2.431057 CCATCGTAAGTACTGCTCCCTT 59.569 50.000 0.00 0.00 39.48 3.95
3401 6810 1.741706 TCGTAAGTACTGCTCCCTTCG 59.258 52.381 0.00 0.00 39.48 3.79
3402 6811 1.471684 CGTAAGTACTGCTCCCTTCGT 59.528 52.381 0.00 0.00 0.00 3.85
3403 6812 2.094854 CGTAAGTACTGCTCCCTTCGTT 60.095 50.000 0.00 0.00 0.00 3.85
3404 6813 3.613432 CGTAAGTACTGCTCCCTTCGTTT 60.613 47.826 0.00 0.00 0.00 3.60
3405 6814 2.745515 AGTACTGCTCCCTTCGTTTC 57.254 50.000 0.00 0.00 0.00 2.78
3406 6815 1.968493 AGTACTGCTCCCTTCGTTTCA 59.032 47.619 0.00 0.00 0.00 2.69
3407 6816 2.367567 AGTACTGCTCCCTTCGTTTCAA 59.632 45.455 0.00 0.00 0.00 2.69
3408 6817 2.341846 ACTGCTCCCTTCGTTTCAAA 57.658 45.000 0.00 0.00 0.00 2.69
3409 6818 2.650322 ACTGCTCCCTTCGTTTCAAAA 58.350 42.857 0.00 0.00 0.00 2.44
3410 6819 3.222603 ACTGCTCCCTTCGTTTCAAAAT 58.777 40.909 0.00 0.00 0.00 1.82
3411 6820 4.394729 ACTGCTCCCTTCGTTTCAAAATA 58.605 39.130 0.00 0.00 0.00 1.40
3412 6821 4.825085 ACTGCTCCCTTCGTTTCAAAATAA 59.175 37.500 0.00 0.00 0.00 1.40
3413 6822 5.476945 ACTGCTCCCTTCGTTTCAAAATAAT 59.523 36.000 0.00 0.00 0.00 1.28
3414 6823 6.015434 ACTGCTCCCTTCGTTTCAAAATAATT 60.015 34.615 0.00 0.00 0.00 1.40
3415 6824 6.155827 TGCTCCCTTCGTTTCAAAATAATTG 58.844 36.000 0.00 0.00 0.00 2.32
3416 6825 6.015856 TGCTCCCTTCGTTTCAAAATAATTGA 60.016 34.615 0.00 0.00 0.00 2.57
3417 6826 6.866248 GCTCCCTTCGTTTCAAAATAATTGAA 59.134 34.615 0.00 0.00 36.71 2.69
3418 6827 7.062255 GCTCCCTTCGTTTCAAAATAATTGAAG 59.938 37.037 4.09 0.00 39.30 3.02
3419 6828 7.947282 TCCCTTCGTTTCAAAATAATTGAAGT 58.053 30.769 4.09 0.00 39.30 3.01
3420 6829 8.417884 TCCCTTCGTTTCAAAATAATTGAAGTT 58.582 29.630 4.09 0.00 39.30 2.66
3421 6830 8.699749 CCCTTCGTTTCAAAATAATTGAAGTTC 58.300 33.333 0.00 0.00 39.30 3.01
3422 6831 9.463443 CCTTCGTTTCAAAATAATTGAAGTTCT 57.537 29.630 4.17 0.00 39.30 3.01
3454 6863 7.435068 TCCTAAGTCAAACTTCATAAAGTGC 57.565 36.000 0.00 0.00 45.07 4.40
3455 6864 6.995686 TCCTAAGTCAAACTTCATAAAGTGCA 59.004 34.615 0.00 0.00 45.07 4.57
3456 6865 7.500892 TCCTAAGTCAAACTTCATAAAGTGCAA 59.499 33.333 0.00 0.00 45.07 4.08
3457 6866 7.591426 CCTAAGTCAAACTTCATAAAGTGCAAC 59.409 37.037 0.00 0.00 45.07 4.17
3458 6867 5.831997 AGTCAAACTTCATAAAGTGCAACC 58.168 37.500 0.00 0.00 45.07 3.77
3459 6868 5.359576 AGTCAAACTTCATAAAGTGCAACCA 59.640 36.000 0.00 0.00 45.07 3.67
3460 6869 6.039616 GTCAAACTTCATAAAGTGCAACCAA 58.960 36.000 0.00 0.00 45.07 3.67
3461 6870 6.701400 GTCAAACTTCATAAAGTGCAACCAAT 59.299 34.615 0.00 0.00 45.07 3.16
3462 6871 7.224557 GTCAAACTTCATAAAGTGCAACCAATT 59.775 33.333 0.00 0.00 45.07 2.32
3463 6872 7.437862 TCAAACTTCATAAAGTGCAACCAATTC 59.562 33.333 0.00 0.00 45.07 2.17
3464 6873 6.655078 ACTTCATAAAGTGCAACCAATTCT 57.345 33.333 0.00 0.00 44.13 2.40
3465 6874 7.759489 ACTTCATAAAGTGCAACCAATTCTA 57.241 32.000 0.00 0.00 44.13 2.10
3466 6875 8.353423 ACTTCATAAAGTGCAACCAATTCTAT 57.647 30.769 0.00 0.00 44.13 1.98
3467 6876 9.461312 ACTTCATAAAGTGCAACCAATTCTATA 57.539 29.630 0.00 0.00 44.13 1.31
3475 6884 7.651808 AGTGCAACCAATTCTATATAACATGC 58.348 34.615 0.00 0.00 37.80 4.06
3476 6885 6.863126 GTGCAACCAATTCTATATAACATGCC 59.137 38.462 0.00 0.00 0.00 4.40
3477 6886 6.548993 TGCAACCAATTCTATATAACATGCCA 59.451 34.615 0.00 0.00 0.00 4.92
3478 6887 7.069208 TGCAACCAATTCTATATAACATGCCAA 59.931 33.333 0.00 0.00 0.00 4.52
3479 6888 7.382218 GCAACCAATTCTATATAACATGCCAAC 59.618 37.037 0.00 0.00 0.00 3.77
3480 6889 8.412456 CAACCAATTCTATATAACATGCCAACA 58.588 33.333 0.00 0.00 0.00 3.33
3481 6890 8.710749 ACCAATTCTATATAACATGCCAACAT 57.289 30.769 0.00 0.00 36.79 2.71
3482 6891 8.796475 ACCAATTCTATATAACATGCCAACATC 58.204 33.333 0.00 0.00 32.87 3.06
3483 6892 9.017509 CCAATTCTATATAACATGCCAACATCT 57.982 33.333 0.00 0.00 32.87 2.90
3491 6900 4.519540 ACATGCCAACATCTACAAAACC 57.480 40.909 0.00 0.00 32.87 3.27
3492 6901 3.894427 ACATGCCAACATCTACAAAACCA 59.106 39.130 0.00 0.00 32.87 3.67
3493 6902 4.343526 ACATGCCAACATCTACAAAACCAA 59.656 37.500 0.00 0.00 32.87 3.67
3494 6903 5.163364 ACATGCCAACATCTACAAAACCAAA 60.163 36.000 0.00 0.00 32.87 3.28
3495 6904 5.344743 TGCCAACATCTACAAAACCAAAA 57.655 34.783 0.00 0.00 0.00 2.44
3496 6905 5.923204 TGCCAACATCTACAAAACCAAAAT 58.077 33.333 0.00 0.00 0.00 1.82
3497 6906 6.352516 TGCCAACATCTACAAAACCAAAATT 58.647 32.000 0.00 0.00 0.00 1.82
3498 6907 7.500992 TGCCAACATCTACAAAACCAAAATTA 58.499 30.769 0.00 0.00 0.00 1.40
3499 6908 8.153550 TGCCAACATCTACAAAACCAAAATTAT 58.846 29.630 0.00 0.00 0.00 1.28
3500 6909 8.998377 GCCAACATCTACAAAACCAAAATTATT 58.002 29.630 0.00 0.00 0.00 1.40
3549 6958 7.850935 TTTTCTAATCATATACTCCCTCCGT 57.149 36.000 0.00 0.00 0.00 4.69
3550 6959 7.850935 TTTCTAATCATATACTCCCTCCGTT 57.149 36.000 0.00 0.00 0.00 4.44
3551 6960 7.463961 TTCTAATCATATACTCCCTCCGTTC 57.536 40.000 0.00 0.00 0.00 3.95
3552 6961 4.785511 AATCATATACTCCCTCCGTTCG 57.214 45.455 0.00 0.00 0.00 3.95
3553 6962 2.511659 TCATATACTCCCTCCGTTCGG 58.488 52.381 4.74 4.74 0.00 4.30
3554 6963 2.107031 TCATATACTCCCTCCGTTCGGA 59.893 50.000 13.34 13.34 0.00 4.55
3555 6964 2.734755 TATACTCCCTCCGTTCGGAA 57.265 50.000 14.79 0.00 33.41 4.30
3556 6965 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
3557 6966 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
3558 6967 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3559 6968 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3560 6969 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3561 6970 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
3562 6971 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3563 6972 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3564 6973 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
3565 6974 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
3566 6975 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
3567 6976 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
3568 6977 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
3569 6978 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
3570 6979 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
3571 6980 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
3572 6981 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
3573 6982 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
3574 6983 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
3575 6984 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
3576 6985 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
3577 6986 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
3578 6987 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
3579 6988 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
3580 6989 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
3581 6990 4.333649 ACTTGTCGCAGAAATGGATGTATG 59.666 41.667 0.00 0.00 39.69 2.39
3582 6991 3.872696 TGTCGCAGAAATGGATGTATGT 58.127 40.909 0.00 0.00 39.69 2.29
3583 6992 5.017294 TGTCGCAGAAATGGATGTATGTA 57.983 39.130 0.00 0.00 39.69 2.29
3584 6993 5.049828 TGTCGCAGAAATGGATGTATGTAG 58.950 41.667 0.00 0.00 39.69 2.74
3585 6994 5.163457 TGTCGCAGAAATGGATGTATGTAGA 60.163 40.000 0.00 0.00 39.69 2.59
3586 6995 5.175856 GTCGCAGAAATGGATGTATGTAGAC 59.824 44.000 0.00 0.00 39.69 2.59
3587 6996 4.148871 CGCAGAAATGGATGTATGTAGACG 59.851 45.833 0.00 0.00 0.00 4.18
3588 6997 5.050490 GCAGAAATGGATGTATGTAGACGT 58.950 41.667 0.00 0.00 0.00 4.34
3589 6998 6.213677 GCAGAAATGGATGTATGTAGACGTA 58.786 40.000 0.00 0.00 0.00 3.57
3590 6999 6.868864 GCAGAAATGGATGTATGTAGACGTAT 59.131 38.462 0.00 0.00 0.00 3.06
3591 7000 7.385205 GCAGAAATGGATGTATGTAGACGTATT 59.615 37.037 0.00 0.00 0.00 1.89
3592 7001 9.261180 CAGAAATGGATGTATGTAGACGTATTT 57.739 33.333 0.00 0.00 0.00 1.40
3593 7002 9.832445 AGAAATGGATGTATGTAGACGTATTTT 57.168 29.630 0.00 0.00 0.00 1.82
3598 7007 9.740239 TGGATGTATGTAGACGTATTTTAGTTC 57.260 33.333 0.00 0.00 0.00 3.01
3599 7008 9.962783 GGATGTATGTAGACGTATTTTAGTTCT 57.037 33.333 0.00 0.00 0.00 3.01
3616 7025 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
3617 7026 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
3618 7027 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
3619 7028 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
3620 7029 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
3621 7030 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
3622 7031 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
3623 7032 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
3624 7033 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
3625 7034 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
3626 7035 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
3627 7036 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
3628 7037 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
3629 7038 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
3630 7039 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
3631 7040 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
3632 7041 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
3633 7042 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
3634 7043 4.730949 TCCGAGACAAGTAATTCCGAAT 57.269 40.909 0.00 0.00 0.00 3.34
3635 7044 4.430007 TCCGAGACAAGTAATTCCGAATG 58.570 43.478 0.00 0.00 0.00 2.67
3636 7045 3.555956 CCGAGACAAGTAATTCCGAATGG 59.444 47.826 0.00 0.00 0.00 3.16
3637 7046 4.430007 CGAGACAAGTAATTCCGAATGGA 58.570 43.478 0.00 0.00 44.61 3.41
3651 7060 6.128138 TCCGAATGGAGAGAGTATATCTGA 57.872 41.667 0.00 0.00 40.17 3.27
3652 7061 6.543735 TCCGAATGGAGAGAGTATATCTGAA 58.456 40.000 0.00 0.00 40.17 3.02
3653 7062 7.178573 TCCGAATGGAGAGAGTATATCTGAAT 58.821 38.462 0.00 0.00 40.17 2.57
3654 7063 8.329502 TCCGAATGGAGAGAGTATATCTGAATA 58.670 37.037 0.00 0.00 40.17 1.75
3655 7064 9.130661 CCGAATGGAGAGAGTATATCTGAATAT 57.869 37.037 0.00 0.00 36.19 1.28
3672 7081 8.812513 TCTGAATATCATGAATTGGTCAAAGT 57.187 30.769 0.00 0.00 40.50 2.66
3673 7082 9.246670 TCTGAATATCATGAATTGGTCAAAGTT 57.753 29.630 0.00 0.00 40.50 2.66
3674 7083 9.512435 CTGAATATCATGAATTGGTCAAAGTTC 57.488 33.333 0.00 0.00 40.50 3.01
3675 7084 9.022884 TGAATATCATGAATTGGTCAAAGTTCA 57.977 29.630 0.00 3.25 40.50 3.18
3676 7085 9.859427 GAATATCATGAATTGGTCAAAGTTCAA 57.141 29.630 0.00 0.00 40.50 2.69
3679 7088 8.961294 ATCATGAATTGGTCAAAGTTCAAAAA 57.039 26.923 0.00 0.00 40.50 1.94
3680 7089 8.422973 TCATGAATTGGTCAAAGTTCAAAAAG 57.577 30.769 0.00 0.00 40.50 2.27
3681 7090 8.040132 TCATGAATTGGTCAAAGTTCAAAAAGT 58.960 29.630 0.00 0.00 40.50 2.66
3682 7091 8.667463 CATGAATTGGTCAAAGTTCAAAAAGTT 58.333 29.630 4.51 0.00 40.50 2.66
3683 7092 8.027440 TGAATTGGTCAAAGTTCAAAAAGTTG 57.973 30.769 0.00 0.00 31.51 3.16
3684 7093 6.983474 ATTGGTCAAAGTTCAAAAAGTTGG 57.017 33.333 0.00 0.00 35.29 3.77
3685 7094 5.730296 TGGTCAAAGTTCAAAAAGTTGGA 57.270 34.783 0.00 0.00 35.29 3.53
3686 7095 5.474825 TGGTCAAAGTTCAAAAAGTTGGAC 58.525 37.500 5.15 5.15 43.67 4.02
3698 7107 9.541143 TTCAAAAAGTTGGACTTATGAAAATCC 57.459 29.630 14.41 0.00 39.28 3.01
3699 7108 8.923270 TCAAAAAGTTGGACTTATGAAAATCCT 58.077 29.630 6.72 0.00 37.47 3.24
3702 7111 9.807921 AAAAGTTGGACTTATGAAAATCCTAGA 57.192 29.630 0.00 0.00 37.47 2.43
3703 7112 9.807921 AAAGTTGGACTTATGAAAATCCTAGAA 57.192 29.630 0.00 0.00 37.47 2.10
3704 7113 8.794335 AGTTGGACTTATGAAAATCCTAGAAC 57.206 34.615 0.00 0.00 32.06 3.01
3705 7114 8.606830 AGTTGGACTTATGAAAATCCTAGAACT 58.393 33.333 0.00 0.00 32.06 3.01
3706 7115 9.232473 GTTGGACTTATGAAAATCCTAGAACTT 57.768 33.333 0.00 0.00 32.06 2.66
3707 7116 9.449719 TTGGACTTATGAAAATCCTAGAACTTC 57.550 33.333 0.00 0.00 32.06 3.01
3708 7117 8.602424 TGGACTTATGAAAATCCTAGAACTTCA 58.398 33.333 0.00 0.00 32.06 3.02
3709 7118 8.884726 GGACTTATGAAAATCCTAGAACTTCAC 58.115 37.037 0.00 0.00 0.00 3.18
3710 7119 9.660180 GACTTATGAAAATCCTAGAACTTCACT 57.340 33.333 0.00 0.00 0.00 3.41
3718 7127 9.807921 AAAATCCTAGAACTTCACTATTTTGGA 57.192 29.630 0.00 0.00 0.00 3.53
3719 7128 9.807921 AAATCCTAGAACTTCACTATTTTGGAA 57.192 29.630 0.00 0.00 0.00 3.53
3720 7129 8.794335 ATCCTAGAACTTCACTATTTTGGAAC 57.206 34.615 0.00 0.00 0.00 3.62
3721 7130 7.741785 TCCTAGAACTTCACTATTTTGGAACA 58.258 34.615 0.00 0.00 0.00 3.18
3735 7144 3.116079 TGGAACAAAGGGAGTACGTTC 57.884 47.619 0.00 0.00 36.17 3.95
3736 7145 2.435069 TGGAACAAAGGGAGTACGTTCA 59.565 45.455 0.00 0.00 38.14 3.18
3737 7146 3.071892 TGGAACAAAGGGAGTACGTTCAT 59.928 43.478 0.00 0.00 38.14 2.57
3738 7147 3.683340 GGAACAAAGGGAGTACGTTCATC 59.317 47.826 0.00 0.00 38.14 2.92
3739 7148 4.312443 GAACAAAGGGAGTACGTTCATCA 58.688 43.478 0.00 0.00 36.75 3.07
3740 7149 3.660865 ACAAAGGGAGTACGTTCATCAC 58.339 45.455 0.00 0.00 0.00 3.06
3741 7150 3.000727 CAAAGGGAGTACGTTCATCACC 58.999 50.000 0.00 0.00 0.00 4.02
3742 7151 1.933021 AGGGAGTACGTTCATCACCA 58.067 50.000 0.00 0.00 0.00 4.17
3743 7152 2.467880 AGGGAGTACGTTCATCACCAT 58.532 47.619 0.00 0.00 0.00 3.55
3744 7153 2.431057 AGGGAGTACGTTCATCACCATC 59.569 50.000 0.00 0.00 0.00 3.51
3745 7154 2.431057 GGGAGTACGTTCATCACCATCT 59.569 50.000 0.00 0.00 0.00 2.90
3746 7155 3.118738 GGGAGTACGTTCATCACCATCTT 60.119 47.826 0.00 0.00 0.00 2.40
3747 7156 4.098960 GGGAGTACGTTCATCACCATCTTA 59.901 45.833 0.00 0.00 0.00 2.10
3748 7157 5.394883 GGGAGTACGTTCATCACCATCTTAA 60.395 44.000 0.00 0.00 0.00 1.85
3749 7158 5.749109 GGAGTACGTTCATCACCATCTTAAG 59.251 44.000 0.00 0.00 0.00 1.85
3750 7159 6.282199 AGTACGTTCATCACCATCTTAAGT 57.718 37.500 1.63 0.00 0.00 2.24
3751 7160 6.331061 AGTACGTTCATCACCATCTTAAGTC 58.669 40.000 1.63 0.00 0.00 3.01
3752 7161 4.174009 ACGTTCATCACCATCTTAAGTCG 58.826 43.478 1.63 0.00 0.00 4.18
3753 7162 4.082408 ACGTTCATCACCATCTTAAGTCGA 60.082 41.667 1.63 0.00 0.00 4.20
3754 7163 4.500837 CGTTCATCACCATCTTAAGTCGAG 59.499 45.833 1.63 0.00 0.00 4.04
3755 7164 4.655762 TCATCACCATCTTAAGTCGAGG 57.344 45.455 1.63 3.41 0.00 4.63
3756 7165 3.384789 TCATCACCATCTTAAGTCGAGGG 59.615 47.826 1.63 0.00 38.26 4.30
3757 7166 1.480954 TCACCATCTTAAGTCGAGGGC 59.519 52.381 1.63 0.00 35.84 5.19
3758 7167 0.460311 ACCATCTTAAGTCGAGGGCG 59.540 55.000 1.63 0.00 35.84 6.13
3759 7168 0.744874 CCATCTTAAGTCGAGGGCGA 59.255 55.000 1.63 0.00 45.71 5.54
3767 7176 3.781307 TCGAGGGCGAACCATGGG 61.781 66.667 18.09 0.00 44.78 4.00
3768 7177 4.096003 CGAGGGCGAACCATGGGT 62.096 66.667 18.09 10.33 43.89 4.51
3769 7178 2.124695 GAGGGCGAACCATGGGTC 60.125 66.667 20.68 20.68 43.89 4.46
3770 7179 2.610859 AGGGCGAACCATGGGTCT 60.611 61.111 27.03 5.78 43.89 3.85
3771 7180 1.306654 AGGGCGAACCATGGGTCTA 60.307 57.895 27.03 0.00 43.89 2.59
3772 7181 1.153229 GGGCGAACCATGGGTCTAC 60.153 63.158 27.03 18.32 39.85 2.59
3773 7182 1.153229 GGCGAACCATGGGTCTACC 60.153 63.158 27.03 23.01 33.12 3.18
3774 7183 1.623542 GGCGAACCATGGGTCTACCT 61.624 60.000 27.03 0.00 33.12 3.08
3775 7184 0.462047 GCGAACCATGGGTCTACCTG 60.462 60.000 27.03 12.44 41.11 4.00
3776 7185 1.191535 CGAACCATGGGTCTACCTGA 58.808 55.000 27.03 0.00 41.11 3.86
3777 7186 1.553248 CGAACCATGGGTCTACCTGAA 59.447 52.381 27.03 0.00 41.11 3.02
3778 7187 2.170607 CGAACCATGGGTCTACCTGAAT 59.829 50.000 27.03 0.00 41.11 2.57
3779 7188 3.545703 GAACCATGGGTCTACCTGAATG 58.454 50.000 23.24 1.86 41.11 2.67
3780 7189 1.846439 ACCATGGGTCTACCTGAATGG 59.154 52.381 18.09 19.08 42.18 3.16
3781 7190 1.477558 CCATGGGTCTACCTGAATGGC 60.478 57.143 2.85 0.00 41.11 4.40
3782 7191 0.846693 ATGGGTCTACCTGAATGGCC 59.153 55.000 0.00 0.00 41.11 5.36
3783 7192 0.548926 TGGGTCTACCTGAATGGCCA 60.549 55.000 8.56 8.56 41.11 5.36
3784 7193 0.181350 GGGTCTACCTGAATGGCCAG 59.819 60.000 13.05 0.00 40.22 4.85
3785 7194 0.464554 GGTCTACCTGAATGGCCAGC 60.465 60.000 13.05 6.50 40.22 4.85
3786 7195 0.253044 GTCTACCTGAATGGCCAGCA 59.747 55.000 13.05 11.43 40.22 4.41
3787 7196 0.543277 TCTACCTGAATGGCCAGCAG 59.457 55.000 24.47 24.47 40.22 4.24
3789 7198 2.357836 CCTGAATGGCCAGCAGGT 59.642 61.111 33.82 9.42 43.25 4.00
3790 7199 2.050350 CCTGAATGGCCAGCAGGTG 61.050 63.158 33.82 18.98 43.25 4.00
3791 7200 2.677524 TGAATGGCCAGCAGGTGC 60.678 61.111 13.05 0.00 42.49 5.01
3803 7212 0.869730 GCAGGTGCTTGCATTTTTGG 59.130 50.000 0.00 0.00 43.53 3.28
3804 7213 1.515081 CAGGTGCTTGCATTTTTGGG 58.485 50.000 0.00 0.00 0.00 4.12
3805 7214 1.130777 AGGTGCTTGCATTTTTGGGT 58.869 45.000 0.00 0.00 0.00 4.51
3806 7215 1.202675 AGGTGCTTGCATTTTTGGGTG 60.203 47.619 0.00 0.00 0.00 4.61
3811 7220 2.799978 GCTTGCATTTTTGGGTGTGTAC 59.200 45.455 0.00 0.00 0.00 2.90
3818 7227 1.448922 TTTGGGTGTGTACCTTGCGC 61.449 55.000 0.00 0.00 46.66 6.09
3835 7244 2.207177 GCTGCACAGCGACAAAAAC 58.793 52.632 6.92 0.00 45.29 2.43
3838 7247 1.782569 CTGCACAGCGACAAAAACATG 59.217 47.619 0.00 0.00 0.00 3.21
3840 7249 1.780860 GCACAGCGACAAAAACATGAC 59.219 47.619 0.00 0.00 0.00 3.06
3844 7253 2.811431 CAGCGACAAAAACATGACCCTA 59.189 45.455 0.00 0.00 0.00 3.53
3845 7254 3.440173 CAGCGACAAAAACATGACCCTAT 59.560 43.478 0.00 0.00 0.00 2.57
3846 7255 3.440173 AGCGACAAAAACATGACCCTATG 59.560 43.478 0.00 0.00 0.00 2.23
3847 7256 3.438781 GCGACAAAAACATGACCCTATGA 59.561 43.478 0.00 0.00 0.00 2.15
3848 7257 4.671766 GCGACAAAAACATGACCCTATGAC 60.672 45.833 0.00 0.00 0.00 3.06
3849 7258 4.142687 CGACAAAAACATGACCCTATGACC 60.143 45.833 0.00 0.00 0.00 4.02
3850 7259 4.086457 ACAAAAACATGACCCTATGACCC 58.914 43.478 0.00 0.00 0.00 4.46
3851 7260 4.202673 ACAAAAACATGACCCTATGACCCT 60.203 41.667 0.00 0.00 0.00 4.34
3852 7261 4.675063 AAAACATGACCCTATGACCCTT 57.325 40.909 0.00 0.00 0.00 3.95
3853 7262 5.789574 AAAACATGACCCTATGACCCTTA 57.210 39.130 0.00 0.00 0.00 2.69
3854 7263 5.789574 AAACATGACCCTATGACCCTTAA 57.210 39.130 0.00 0.00 0.00 1.85
3855 7264 5.789574 AACATGACCCTATGACCCTTAAA 57.210 39.130 0.00 0.00 0.00 1.52
3856 7265 5.994416 ACATGACCCTATGACCCTTAAAT 57.006 39.130 0.00 0.00 0.00 1.40
3857 7266 5.694995 ACATGACCCTATGACCCTTAAATG 58.305 41.667 0.00 0.00 0.00 2.32
3858 7267 5.193728 ACATGACCCTATGACCCTTAAATGT 59.806 40.000 0.00 0.00 0.00 2.71
3861 7270 5.112129 ACCCTATGACCCTTAAATGTGAC 57.888 43.478 0.00 0.00 0.00 3.67
3868 7277 2.081462 CCCTTAAATGTGACGGGACAC 58.919 52.381 0.00 0.00 37.05 3.67
3872 7281 4.561938 CCTTAAATGTGACGGGACACTGTA 60.562 45.833 10.04 0.13 40.87 2.74
3873 7282 2.450609 AATGTGACGGGACACTGTAC 57.549 50.000 10.04 0.00 40.87 2.90
3884 7293 4.390909 CGGGACACTGTACCAACTTATTTC 59.609 45.833 11.25 0.00 36.00 2.17
3886 7295 6.572898 CGGGACACTGTACCAACTTATTTCTA 60.573 42.308 11.25 0.00 36.00 2.10
3889 7298 8.880750 GGACACTGTACCAACTTATTTCTATTC 58.119 37.037 0.00 0.00 0.00 1.75
3890 7299 8.788325 ACACTGTACCAACTTATTTCTATTCC 57.212 34.615 0.00 0.00 0.00 3.01
3891 7300 7.548075 ACACTGTACCAACTTATTTCTATTCCG 59.452 37.037 0.00 0.00 0.00 4.30
3892 7301 7.011109 CACTGTACCAACTTATTTCTATTCCGG 59.989 40.741 0.00 0.00 0.00 5.14
3894 7303 7.622713 TGTACCAACTTATTTCTATTCCGGAA 58.377 34.615 21.37 21.37 0.00 4.30
3895 7304 8.102047 TGTACCAACTTATTTCTATTCCGGAAA 58.898 33.333 23.08 4.12 37.15 3.13
3898 7307 9.117183 ACCAACTTATTTCTATTCCGGAAATAC 57.883 33.333 23.08 0.00 41.99 1.89
3905 7314 8.980481 ATTTCTATTCCGGAAATACTTGACAT 57.020 30.769 23.08 6.86 40.31 3.06
3906 7315 8.433421 TTTCTATTCCGGAAATACTTGACATC 57.567 34.615 23.08 0.00 0.00 3.06
3907 7316 7.119709 TCTATTCCGGAAATACTTGACATCA 57.880 36.000 23.08 0.00 0.00 3.07
3910 8716 6.885952 TTCCGGAAATACTTGACATCAAAA 57.114 33.333 16.28 0.00 35.15 2.44
3911 8717 7.461182 TTCCGGAAATACTTGACATCAAAAT 57.539 32.000 16.28 0.00 35.15 1.82
3990 9444 5.865552 TCTAACAAGTATTTTCGGACGAAGG 59.134 40.000 7.25 0.00 35.38 3.46
3991 9445 3.332034 ACAAGTATTTTCGGACGAAGGG 58.668 45.455 7.25 0.00 35.38 3.95
3992 9446 3.007182 ACAAGTATTTTCGGACGAAGGGA 59.993 43.478 7.25 0.00 35.38 4.20
3994 9448 4.482952 AGTATTTTCGGACGAAGGGAAT 57.517 40.909 7.25 7.49 35.38 3.01
3996 9450 6.170846 AGTATTTTCGGACGAAGGGAATAT 57.829 37.500 7.25 0.19 35.38 1.28
3997 9451 6.221659 AGTATTTTCGGACGAAGGGAATATC 58.778 40.000 7.25 5.18 35.38 1.63
4000 9454 3.728076 TCGGACGAAGGGAATATCAAG 57.272 47.619 0.00 0.00 0.00 3.02
4001 9455 3.293337 TCGGACGAAGGGAATATCAAGA 58.707 45.455 0.00 0.00 0.00 3.02
4002 9456 3.702548 TCGGACGAAGGGAATATCAAGAA 59.297 43.478 0.00 0.00 0.00 2.52
4003 9457 3.802685 CGGACGAAGGGAATATCAAGAAC 59.197 47.826 0.00 0.00 0.00 3.01
4004 9458 4.441634 CGGACGAAGGGAATATCAAGAACT 60.442 45.833 0.00 0.00 0.00 3.01
4007 9461 3.561725 CGAAGGGAATATCAAGAACTGGC 59.438 47.826 0.00 0.00 0.00 4.85
4008 9462 3.199880 AGGGAATATCAAGAACTGGCG 57.800 47.619 0.00 0.00 0.00 5.69
4009 9463 2.505819 AGGGAATATCAAGAACTGGCGT 59.494 45.455 0.00 0.00 0.00 5.68
4010 9464 3.054361 AGGGAATATCAAGAACTGGCGTT 60.054 43.478 0.00 0.00 35.68 4.84
4012 9466 4.879545 GGGAATATCAAGAACTGGCGTTTA 59.120 41.667 0.00 0.00 32.39 2.01
4013 9467 5.531287 GGGAATATCAAGAACTGGCGTTTAT 59.469 40.000 0.00 0.00 32.39 1.40
4015 9469 6.483640 GGAATATCAAGAACTGGCGTTTATCT 59.516 38.462 0.00 0.00 32.39 1.98
4016 9470 7.012421 GGAATATCAAGAACTGGCGTTTATCTT 59.988 37.037 0.00 0.00 32.39 2.40
4017 9471 7.865706 ATATCAAGAACTGGCGTTTATCTTT 57.134 32.000 0.00 0.00 32.39 2.52
4020 9474 4.663636 AGAACTGGCGTTTATCTTTTCG 57.336 40.909 0.00 0.00 32.39 3.46
4021 9475 4.312443 AGAACTGGCGTTTATCTTTTCGA 58.688 39.130 0.00 0.00 32.39 3.71
4022 9476 4.753107 AGAACTGGCGTTTATCTTTTCGAA 59.247 37.500 0.00 0.00 32.39 3.71
4023 9477 5.237779 AGAACTGGCGTTTATCTTTTCGAAA 59.762 36.000 6.47 6.47 32.39 3.46
4024 9478 5.030874 ACTGGCGTTTATCTTTTCGAAAG 57.969 39.130 10.98 5.92 0.00 2.62
4033 9811 4.756084 ATCTTTTCGAAAGCAAGAGTGG 57.244 40.909 10.98 0.00 34.81 4.00
4035 9813 1.674359 TTTCGAAAGCAAGAGTGGCA 58.326 45.000 6.47 0.00 0.00 4.92
4039 9817 1.536766 CGAAAGCAAGAGTGGCATTGA 59.463 47.619 3.58 0.00 0.00 2.57
4045 9823 3.005155 AGCAAGAGTGGCATTGAAAGAAC 59.995 43.478 3.58 0.00 0.00 3.01
4047 9825 4.293415 CAAGAGTGGCATTGAAAGAACAC 58.707 43.478 0.00 0.00 0.00 3.32
4048 9826 2.887152 AGAGTGGCATTGAAAGAACACC 59.113 45.455 0.00 0.00 0.00 4.16
4061 9839 1.348036 AGAACACCCTGTGGAAGCTAC 59.652 52.381 0.00 0.00 37.94 3.58
4065 9843 2.976882 ACACCCTGTGGAAGCTACTAAA 59.023 45.455 0.00 0.00 37.94 1.85
4068 9846 5.116882 CACCCTGTGGAAGCTACTAAATAC 58.883 45.833 0.00 0.00 34.81 1.89
4069 9847 4.781087 ACCCTGTGGAAGCTACTAAATACA 59.219 41.667 0.00 0.00 34.81 2.29
4070 9848 5.104900 ACCCTGTGGAAGCTACTAAATACAG 60.105 44.000 0.00 0.00 35.34 2.74
4071 9849 4.811557 CCTGTGGAAGCTACTAAATACAGC 59.188 45.833 0.00 0.00 34.51 4.40
4072 9850 5.414789 TGTGGAAGCTACTAAATACAGCA 57.585 39.130 0.00 0.00 37.78 4.41
4073 9851 5.419542 TGTGGAAGCTACTAAATACAGCAG 58.580 41.667 0.00 0.00 37.78 4.24
4074 9852 4.811557 GTGGAAGCTACTAAATACAGCAGG 59.188 45.833 0.00 0.00 37.78 4.85
4075 9853 4.714802 TGGAAGCTACTAAATACAGCAGGA 59.285 41.667 0.00 0.00 37.78 3.86
4076 9854 5.188948 TGGAAGCTACTAAATACAGCAGGAA 59.811 40.000 0.00 0.00 37.78 3.36
4077 9855 6.113411 GGAAGCTACTAAATACAGCAGGAAA 58.887 40.000 0.00 0.00 37.78 3.13
4078 9856 6.768381 GGAAGCTACTAAATACAGCAGGAAAT 59.232 38.462 0.00 0.00 37.78 2.17
4079 9857 7.931948 GGAAGCTACTAAATACAGCAGGAAATA 59.068 37.037 0.00 0.00 37.78 1.40
4128 9906 4.291540 CCATTGGGTCATACGAAACATG 57.708 45.455 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 8.105135 CCGGTTGTATTGTAATTTTATTTTGCG 58.895 33.333 0.00 0.00 0.00 4.85
38 39 5.862924 AATAAACATCCAAGTCAGACACG 57.137 39.130 2.66 0.00 0.00 4.49
99 101 5.870978 AGCACATACCGTAAAAGAAACGTAT 59.129 36.000 0.00 0.00 38.67 3.06
107 109 6.812160 AGAAACTCTAGCACATACCGTAAAAG 59.188 38.462 0.00 0.00 0.00 2.27
112 114 4.017808 AGAGAAACTCTAGCACATACCGT 58.982 43.478 0.00 0.00 39.28 4.83
196 198 1.087771 GCTAGGCGTGCAACCGTAAT 61.088 55.000 0.00 0.00 0.00 1.89
199 201 3.530910 AAGCTAGGCGTGCAACCGT 62.531 57.895 7.43 0.00 0.00 4.83
210 212 1.168714 GCAAAGGTCACCAAGCTAGG 58.831 55.000 0.00 0.00 33.60 3.02
215 217 2.813061 CACAAAGCAAAGGTCACCAAG 58.187 47.619 0.00 0.00 0.00 3.61
229 231 0.712775 CTTCTCGAGCGAGCACAAAG 59.287 55.000 14.61 9.31 41.71 2.77
232 234 2.126307 GCTTCTCGAGCGAGCACA 60.126 61.111 25.95 0.23 42.46 4.57
273 275 1.801395 CGGTAAGGCATCGATGTCGTT 60.801 52.381 22.99 22.41 37.51 3.85
275 277 0.030235 TCGGTAAGGCATCGATGTCG 59.970 55.000 25.47 18.00 37.51 4.35
277 279 1.335964 CGATCGGTAAGGCATCGATGT 60.336 52.381 25.47 9.60 42.65 3.06
313 339 7.542824 GTCTCTCTTCTAGTTTTATGAGCGTTT 59.457 37.037 0.00 0.00 0.00 3.60
315 341 6.404954 GGTCTCTCTTCTAGTTTTATGAGCGT 60.405 42.308 0.00 0.00 0.00 5.07
319 345 8.367660 ACATGGTCTCTCTTCTAGTTTTATGA 57.632 34.615 0.00 0.00 0.00 2.15
327 353 6.593382 CCTTGAAAACATGGTCTCTCTTCTAG 59.407 42.308 0.00 0.00 0.00 2.43
369 395 3.650281 TGACTATCACCATGTGGCAAT 57.350 42.857 0.00 0.00 39.32 3.56
372 398 2.017049 GGTTGACTATCACCATGTGGC 58.983 52.381 0.00 0.00 39.32 5.01
373 399 3.634397 AGGTTGACTATCACCATGTGG 57.366 47.619 0.00 0.00 42.17 4.17
386 413 7.490079 TGATTTACATACACGTGATAGGTTGAC 59.510 37.037 25.01 7.65 0.00 3.18
712 743 2.344203 CGCTTCGTCTCCAGGGAGT 61.344 63.158 14.70 0.00 42.49 3.85
758 790 0.028538 TTATATGCTCCCCCACCCCA 60.029 55.000 0.00 0.00 0.00 4.96
762 794 3.636153 GGAGATTATATGCTCCCCCAC 57.364 52.381 9.28 0.00 43.91 4.61
769 801 3.766591 CGGAGAGGTGGAGATTATATGCT 59.233 47.826 0.00 0.00 0.00 3.79
808 840 2.879826 CGATTTGGGTGAGCAAAATCC 58.120 47.619 16.41 2.52 37.12 3.01
822 855 2.813474 TCGTGGCTCGGCGATTTG 60.813 61.111 11.27 0.00 40.32 2.32
1031 1075 4.218312 AGTTGATCTTCTTTTTGCAGGGT 58.782 39.130 0.00 0.00 0.00 4.34
1076 1120 4.142773 CGGATTTGCTTCTTTTAGCGGTAA 60.143 41.667 2.26 2.26 44.18 2.85
1398 1458 1.028330 ACTCGCGGTTCAGGATCGTA 61.028 55.000 6.13 0.00 0.00 3.43
1483 1543 2.785269 TGTGGGATTCCAGGATAGCATT 59.215 45.455 4.80 0.00 45.05 3.56
1488 1548 2.126882 CCACTGTGGGATTCCAGGATA 58.873 52.381 19.23 0.00 45.05 2.59
1506 1566 0.613260 ATCTTCTTAGCCGTGTGCCA 59.387 50.000 0.00 0.00 42.71 4.92
1513 1573 5.692204 ACGTGATATCAAATCTTCTTAGCCG 59.308 40.000 7.07 4.59 0.00 5.52
1881 1941 1.562575 GCAGTGGGTAACAACGACCG 61.563 60.000 0.00 0.00 37.90 4.79
1920 1980 1.033202 TACGCAGCCGACATAGTGGA 61.033 55.000 0.00 0.00 38.29 4.02
2013 2073 0.325860 TAATGGGTACGGCCTGACCT 60.326 55.000 19.32 5.83 35.91 3.85
2023 2083 3.598019 TTCACCGAGTGTAATGGGTAC 57.402 47.619 4.33 0.00 34.79 3.34
2257 2319 4.839668 TTTGAAAATCCAACCACCTACG 57.160 40.909 0.00 0.00 0.00 3.51
2367 4278 4.211920 GCCACCTCTAGAAGACTCACTAT 58.788 47.826 0.00 0.00 0.00 2.12
2491 4405 2.936202 ACTAGGGCGAATCAAATGCAT 58.064 42.857 0.00 0.00 0.00 3.96
2756 6118 2.640826 ACCGATAAACCCTGAAACCTCA 59.359 45.455 0.00 0.00 0.00 3.86
2789 6155 2.949177 TGCACAATACCACCTCAAGT 57.051 45.000 0.00 0.00 0.00 3.16
3135 6535 9.552114 CAAGCTTTTCTCAGACATAAGTAAATG 57.448 33.333 0.00 0.00 0.00 2.32
3148 6548 4.756084 AATTCGACCAAGCTTTTCTCAG 57.244 40.909 0.00 0.00 0.00 3.35
3153 6553 3.123050 GCACAAATTCGACCAAGCTTTT 58.877 40.909 0.00 0.00 0.00 2.27
3166 6566 5.599656 AGATTACATATGGCTGGCACAAATT 59.400 36.000 5.88 0.00 38.70 1.82
3192 6593 5.482175 AGCAGTTTCACACTCCTTAGTAGAT 59.518 40.000 0.00 0.00 33.48 1.98
3252 6653 9.023962 ACCTGATATGCAAAGTAAAAGAAATGA 57.976 29.630 0.00 0.00 0.00 2.57
3262 6663 7.231925 TCCTAACGATACCTGATATGCAAAGTA 59.768 37.037 0.00 0.00 0.00 2.24
3263 6664 6.041637 TCCTAACGATACCTGATATGCAAAGT 59.958 38.462 0.00 0.00 0.00 2.66
3264 6665 6.366332 GTCCTAACGATACCTGATATGCAAAG 59.634 42.308 0.00 0.00 0.00 2.77
3265 6666 6.041637 AGTCCTAACGATACCTGATATGCAAA 59.958 38.462 0.00 0.00 0.00 3.68
3267 6668 5.048013 CAGTCCTAACGATACCTGATATGCA 60.048 44.000 0.00 0.00 0.00 3.96
3268 6669 5.403246 CAGTCCTAACGATACCTGATATGC 58.597 45.833 0.00 0.00 0.00 3.14
3269 6670 5.622460 GCCAGTCCTAACGATACCTGATATG 60.622 48.000 0.00 0.00 0.00 1.78
3270 6671 4.463186 GCCAGTCCTAACGATACCTGATAT 59.537 45.833 0.00 0.00 0.00 1.63
3271 6672 3.825014 GCCAGTCCTAACGATACCTGATA 59.175 47.826 0.00 0.00 0.00 2.15
3272 6673 2.628657 GCCAGTCCTAACGATACCTGAT 59.371 50.000 0.00 0.00 0.00 2.90
3274 6675 1.754803 TGCCAGTCCTAACGATACCTG 59.245 52.381 0.00 0.00 0.00 4.00
3275 6676 2.154567 TGCCAGTCCTAACGATACCT 57.845 50.000 0.00 0.00 0.00 3.08
3276 6677 3.470645 AATGCCAGTCCTAACGATACC 57.529 47.619 0.00 0.00 0.00 2.73
3277 6678 4.270325 GTCAAATGCCAGTCCTAACGATAC 59.730 45.833 0.00 0.00 0.00 2.24
3278 6679 4.439057 GTCAAATGCCAGTCCTAACGATA 58.561 43.478 0.00 0.00 0.00 2.92
3279 6680 3.270877 GTCAAATGCCAGTCCTAACGAT 58.729 45.455 0.00 0.00 0.00 3.73
3281 6682 1.737793 GGTCAAATGCCAGTCCTAACG 59.262 52.381 0.00 0.00 0.00 3.18
3282 6683 2.749621 CTGGTCAAATGCCAGTCCTAAC 59.250 50.000 12.76 0.00 46.22 2.34
3290 6691 3.164268 AGTAATTGCTGGTCAAATGCCA 58.836 40.909 0.00 0.00 38.34 4.92
3291 6692 3.874392 AGTAATTGCTGGTCAAATGCC 57.126 42.857 0.00 0.00 38.34 4.40
3326 6727 9.814899 TCATGCTCTTTTACAAAAATCAAGAAA 57.185 25.926 0.00 0.00 0.00 2.52
3330 6731 6.646240 GCCTCATGCTCTTTTACAAAAATCAA 59.354 34.615 0.00 0.00 36.87 2.57
3332 6733 6.158598 TGCCTCATGCTCTTTTACAAAAATC 58.841 36.000 0.00 0.00 42.00 2.17
3333 6734 6.100404 TGCCTCATGCTCTTTTACAAAAAT 57.900 33.333 0.00 0.00 42.00 1.82
3334 6735 5.528043 TGCCTCATGCTCTTTTACAAAAA 57.472 34.783 0.00 0.00 42.00 1.94
3335 6736 5.528043 TTGCCTCATGCTCTTTTACAAAA 57.472 34.783 0.00 0.00 42.00 2.44
3336 6737 4.559300 GCTTGCCTCATGCTCTTTTACAAA 60.559 41.667 0.00 0.00 42.00 2.83
3337 6738 3.057315 GCTTGCCTCATGCTCTTTTACAA 60.057 43.478 0.00 0.00 42.00 2.41
3338 6739 2.489329 GCTTGCCTCATGCTCTTTTACA 59.511 45.455 0.00 0.00 42.00 2.41
3339 6740 2.489329 TGCTTGCCTCATGCTCTTTTAC 59.511 45.455 6.32 0.00 42.00 2.01
3341 6742 1.624336 TGCTTGCCTCATGCTCTTTT 58.376 45.000 6.32 0.00 42.00 2.27
3342 6743 1.624336 TTGCTTGCCTCATGCTCTTT 58.376 45.000 6.32 0.00 42.00 2.52
3343 6744 1.271656 GTTTGCTTGCCTCATGCTCTT 59.728 47.619 6.32 0.00 42.00 2.85
3344 6745 0.886563 GTTTGCTTGCCTCATGCTCT 59.113 50.000 6.32 0.00 42.00 4.09
3345 6746 0.886563 AGTTTGCTTGCCTCATGCTC 59.113 50.000 6.32 0.00 42.00 4.26
3346 6747 1.815003 GTAGTTTGCTTGCCTCATGCT 59.185 47.619 6.32 0.00 42.00 3.79
3347 6748 1.541147 TGTAGTTTGCTTGCCTCATGC 59.459 47.619 0.00 0.00 41.77 4.06
3348 6749 4.418392 GAATGTAGTTTGCTTGCCTCATG 58.582 43.478 0.00 0.00 0.00 3.07
3349 6750 3.127548 CGAATGTAGTTTGCTTGCCTCAT 59.872 43.478 0.00 0.00 0.00 2.90
3351 6752 2.484264 ACGAATGTAGTTTGCTTGCCTC 59.516 45.455 0.00 0.00 0.00 4.70
3353 6754 2.414161 GGACGAATGTAGTTTGCTTGCC 60.414 50.000 0.00 0.00 0.00 4.52
3354 6755 2.225491 TGGACGAATGTAGTTTGCTTGC 59.775 45.455 0.00 0.00 0.00 4.01
3360 6769 4.153475 CGATGGTTTGGACGAATGTAGTTT 59.847 41.667 0.00 0.00 0.00 2.66
3367 6776 3.934068 ACTTACGATGGTTTGGACGAAT 58.066 40.909 0.00 0.00 0.00 3.34
3371 6780 3.370061 GCAGTACTTACGATGGTTTGGAC 59.630 47.826 0.00 0.00 0.00 4.02
3383 6792 3.589495 AACGAAGGGAGCAGTACTTAC 57.411 47.619 0.00 0.00 0.00 2.34
3385 6794 2.367567 TGAAACGAAGGGAGCAGTACTT 59.632 45.455 0.00 0.00 0.00 2.24
3386 6795 1.968493 TGAAACGAAGGGAGCAGTACT 59.032 47.619 0.00 0.00 0.00 2.73
3387 6796 2.450609 TGAAACGAAGGGAGCAGTAC 57.549 50.000 0.00 0.00 0.00 2.73
3388 6797 3.478857 TTTGAAACGAAGGGAGCAGTA 57.521 42.857 0.00 0.00 0.00 2.74
3389 6798 2.341846 TTTGAAACGAAGGGAGCAGT 57.658 45.000 0.00 0.00 0.00 4.40
3390 6799 3.923017 ATTTTGAAACGAAGGGAGCAG 57.077 42.857 0.00 0.00 0.00 4.24
3392 6801 6.386654 TCAATTATTTTGAAACGAAGGGAGC 58.613 36.000 0.00 0.00 0.00 4.70
3393 6802 8.082242 ACTTCAATTATTTTGAAACGAAGGGAG 58.918 33.333 0.00 0.00 37.89 4.30
3394 6803 7.947282 ACTTCAATTATTTTGAAACGAAGGGA 58.053 30.769 0.00 0.00 37.89 4.20
3395 6804 8.587952 AACTTCAATTATTTTGAAACGAAGGG 57.412 30.769 0.00 0.00 37.89 3.95
3396 6805 9.463443 AGAACTTCAATTATTTTGAAACGAAGG 57.537 29.630 0.00 0.00 37.89 3.46
3428 6837 8.349983 GCACTTTATGAAGTTTGACTTAGGAAA 58.650 33.333 0.00 0.00 43.48 3.13
3429 6838 7.500892 TGCACTTTATGAAGTTTGACTTAGGAA 59.499 33.333 0.00 0.00 43.48 3.36
3430 6839 6.995686 TGCACTTTATGAAGTTTGACTTAGGA 59.004 34.615 0.00 0.00 43.48 2.94
3431 6840 7.202016 TGCACTTTATGAAGTTTGACTTAGG 57.798 36.000 0.00 0.00 43.48 2.69
3432 6841 7.591426 GGTTGCACTTTATGAAGTTTGACTTAG 59.409 37.037 0.00 0.00 43.48 2.18
3433 6842 7.067615 TGGTTGCACTTTATGAAGTTTGACTTA 59.932 33.333 0.00 0.00 43.48 2.24
3434 6843 6.127479 TGGTTGCACTTTATGAAGTTTGACTT 60.127 34.615 0.00 0.00 43.48 3.01
3435 6844 5.359576 TGGTTGCACTTTATGAAGTTTGACT 59.640 36.000 0.00 0.00 43.48 3.41
3436 6845 5.587289 TGGTTGCACTTTATGAAGTTTGAC 58.413 37.500 0.00 0.06 43.48 3.18
3437 6846 5.843673 TGGTTGCACTTTATGAAGTTTGA 57.156 34.783 0.00 0.00 43.48 2.69
3438 6847 7.439056 AGAATTGGTTGCACTTTATGAAGTTTG 59.561 33.333 0.00 0.00 43.48 2.93
3439 6848 7.500141 AGAATTGGTTGCACTTTATGAAGTTT 58.500 30.769 0.00 0.00 43.48 2.66
3440 6849 7.054491 AGAATTGGTTGCACTTTATGAAGTT 57.946 32.000 0.00 0.00 43.48 2.66
3441 6850 6.655078 AGAATTGGTTGCACTTTATGAAGT 57.345 33.333 0.00 0.00 46.85 3.01
3449 6858 8.137437 GCATGTTATATAGAATTGGTTGCACTT 58.863 33.333 0.00 0.00 0.00 3.16
3450 6859 7.255590 GGCATGTTATATAGAATTGGTTGCACT 60.256 37.037 0.00 0.00 0.00 4.40
3451 6860 6.863126 GGCATGTTATATAGAATTGGTTGCAC 59.137 38.462 0.00 0.00 0.00 4.57
3452 6861 6.548993 TGGCATGTTATATAGAATTGGTTGCA 59.451 34.615 0.00 0.00 0.00 4.08
3453 6862 6.980593 TGGCATGTTATATAGAATTGGTTGC 58.019 36.000 0.00 0.00 0.00 4.17
3454 6863 8.412456 TGTTGGCATGTTATATAGAATTGGTTG 58.588 33.333 0.00 0.00 0.00 3.77
3455 6864 8.532186 TGTTGGCATGTTATATAGAATTGGTT 57.468 30.769 0.00 0.00 0.00 3.67
3456 6865 8.710749 ATGTTGGCATGTTATATAGAATTGGT 57.289 30.769 0.00 0.00 33.37 3.67
3457 6866 9.017509 AGATGTTGGCATGTTATATAGAATTGG 57.982 33.333 0.00 0.00 35.07 3.16
3465 6874 8.413229 GGTTTTGTAGATGTTGGCATGTTATAT 58.587 33.333 0.00 0.00 35.07 0.86
3466 6875 7.394641 TGGTTTTGTAGATGTTGGCATGTTATA 59.605 33.333 0.00 0.00 35.07 0.98
3467 6876 6.210385 TGGTTTTGTAGATGTTGGCATGTTAT 59.790 34.615 0.00 0.00 35.07 1.89
3468 6877 5.536538 TGGTTTTGTAGATGTTGGCATGTTA 59.463 36.000 0.00 0.00 35.07 2.41
3469 6878 4.343526 TGGTTTTGTAGATGTTGGCATGTT 59.656 37.500 0.00 0.00 35.07 2.71
3470 6879 3.894427 TGGTTTTGTAGATGTTGGCATGT 59.106 39.130 0.00 0.00 35.07 3.21
3471 6880 4.517952 TGGTTTTGTAGATGTTGGCATG 57.482 40.909 0.00 0.00 35.07 4.06
3472 6881 5.543507 TTTGGTTTTGTAGATGTTGGCAT 57.456 34.783 0.00 0.00 38.18 4.40
3473 6882 5.344743 TTTTGGTTTTGTAGATGTTGGCA 57.655 34.783 0.00 0.00 0.00 4.92
3474 6883 6.859420 AATTTTGGTTTTGTAGATGTTGGC 57.141 33.333 0.00 0.00 0.00 4.52
3523 6932 9.543231 ACGGAGGGAGTATATGATTAGAAAATA 57.457 33.333 0.00 0.00 0.00 1.40
3524 6933 8.437274 ACGGAGGGAGTATATGATTAGAAAAT 57.563 34.615 0.00 0.00 0.00 1.82
3525 6934 7.850935 ACGGAGGGAGTATATGATTAGAAAA 57.149 36.000 0.00 0.00 0.00 2.29
3526 6935 7.309012 CGAACGGAGGGAGTATATGATTAGAAA 60.309 40.741 0.00 0.00 0.00 2.52
3527 6936 6.150641 CGAACGGAGGGAGTATATGATTAGAA 59.849 42.308 0.00 0.00 0.00 2.10
3528 6937 5.646793 CGAACGGAGGGAGTATATGATTAGA 59.353 44.000 0.00 0.00 0.00 2.10
3529 6938 5.163642 CCGAACGGAGGGAGTATATGATTAG 60.164 48.000 7.53 0.00 37.50 1.73
3530 6939 4.703575 CCGAACGGAGGGAGTATATGATTA 59.296 45.833 7.53 0.00 37.50 1.75
3531 6940 3.510360 CCGAACGGAGGGAGTATATGATT 59.490 47.826 7.53 0.00 37.50 2.57
3532 6941 3.090037 CCGAACGGAGGGAGTATATGAT 58.910 50.000 7.53 0.00 37.50 2.45
3533 6942 2.107031 TCCGAACGGAGGGAGTATATGA 59.893 50.000 12.04 0.00 39.76 2.15
3534 6943 2.511659 TCCGAACGGAGGGAGTATATG 58.488 52.381 12.04 0.00 39.76 1.78
3535 6944 2.965671 TCCGAACGGAGGGAGTATAT 57.034 50.000 12.04 0.00 39.76 0.86
3536 6945 2.734755 TTCCGAACGGAGGGAGTATA 57.265 50.000 15.34 0.00 46.06 1.47
3537 6946 2.083628 ATTCCGAACGGAGGGAGTAT 57.916 50.000 15.34 3.38 46.06 2.12
3538 6947 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
3539 6948 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
3540 6949 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3541 6950 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
3542 6951 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3543 6952 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
3544 6953 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
3545 6954 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
3546 6955 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
3547 6956 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
3548 6957 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
3549 6958 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
3550 6959 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
3551 6960 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
3552 6961 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
3553 6962 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
3554 6963 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
3555 6964 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
3556 6965 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
3557 6966 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
3558 6967 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
3559 6968 4.333649 ACATACATCCATTTCTGCGACAAG 59.666 41.667 0.00 0.00 0.00 3.16
3560 6969 4.260985 ACATACATCCATTTCTGCGACAA 58.739 39.130 0.00 0.00 0.00 3.18
3561 6970 3.872696 ACATACATCCATTTCTGCGACA 58.127 40.909 0.00 0.00 0.00 4.35
3562 6971 5.175856 GTCTACATACATCCATTTCTGCGAC 59.824 44.000 0.00 0.00 0.00 5.19
3563 6972 5.289595 GTCTACATACATCCATTTCTGCGA 58.710 41.667 0.00 0.00 0.00 5.10
3564 6973 4.148871 CGTCTACATACATCCATTTCTGCG 59.851 45.833 0.00 0.00 0.00 5.18
3565 6974 5.050490 ACGTCTACATACATCCATTTCTGC 58.950 41.667 0.00 0.00 0.00 4.26
3566 6975 8.818141 AATACGTCTACATACATCCATTTCTG 57.182 34.615 0.00 0.00 0.00 3.02
3567 6976 9.832445 AAAATACGTCTACATACATCCATTTCT 57.168 29.630 0.00 0.00 0.00 2.52
3572 6981 9.740239 GAACTAAAATACGTCTACATACATCCA 57.260 33.333 0.00 0.00 0.00 3.41
3573 6982 9.962783 AGAACTAAAATACGTCTACATACATCC 57.037 33.333 0.00 0.00 0.00 3.51
3590 6999 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
3591 7000 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
3592 7001 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
3593 7002 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
3594 7003 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
3595 7004 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
3596 7005 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
3597 7006 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
3598 7007 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
3599 7008 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
3600 7009 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
3601 7010 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
3602 7011 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
3603 7012 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
3604 7013 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
3605 7014 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
3606 7015 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
3607 7016 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
3608 7017 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
3609 7018 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
3610 7019 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
3611 7020 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
3612 7021 4.524316 TTCGGAATTACTTGTCTCGGAA 57.476 40.909 0.00 0.00 0.00 4.30
3613 7022 4.430007 CATTCGGAATTACTTGTCTCGGA 58.570 43.478 0.00 0.00 0.00 4.55
3614 7023 3.555956 CCATTCGGAATTACTTGTCTCGG 59.444 47.826 0.00 0.00 0.00 4.63
3615 7024 4.430007 TCCATTCGGAATTACTTGTCTCG 58.570 43.478 0.00 0.00 38.83 4.04
3616 7025 5.661458 TCTCCATTCGGAATTACTTGTCTC 58.339 41.667 0.00 0.00 42.21 3.36
3617 7026 5.422331 TCTCTCCATTCGGAATTACTTGTCT 59.578 40.000 0.00 0.00 42.21 3.41
3618 7027 5.661458 TCTCTCCATTCGGAATTACTTGTC 58.339 41.667 0.00 0.00 42.21 3.18
3619 7028 5.187967 ACTCTCTCCATTCGGAATTACTTGT 59.812 40.000 0.00 0.00 42.21 3.16
3620 7029 5.665459 ACTCTCTCCATTCGGAATTACTTG 58.335 41.667 0.00 0.00 42.21 3.16
3621 7030 5.941555 ACTCTCTCCATTCGGAATTACTT 57.058 39.130 0.00 0.00 42.21 2.24
3622 7031 8.887264 ATATACTCTCTCCATTCGGAATTACT 57.113 34.615 0.00 0.00 42.21 2.24
3623 7032 8.962679 AGATATACTCTCTCCATTCGGAATTAC 58.037 37.037 0.00 0.00 42.21 1.89
3624 7033 8.961634 CAGATATACTCTCTCCATTCGGAATTA 58.038 37.037 0.00 0.00 34.20 1.40
3625 7034 7.671819 TCAGATATACTCTCTCCATTCGGAATT 59.328 37.037 0.00 0.00 34.20 2.17
3626 7035 7.178573 TCAGATATACTCTCTCCATTCGGAAT 58.821 38.462 0.00 0.00 34.20 3.01
3627 7036 6.543735 TCAGATATACTCTCTCCATTCGGAA 58.456 40.000 0.00 0.00 34.20 4.30
3628 7037 6.128138 TCAGATATACTCTCTCCATTCGGA 57.872 41.667 0.00 0.00 33.67 4.55
3629 7038 6.825944 TTCAGATATACTCTCTCCATTCGG 57.174 41.667 0.00 0.00 29.16 4.30
3646 7055 9.417561 ACTTTGACCAATTCATGATATTCAGAT 57.582 29.630 0.00 0.00 32.84 2.90
3647 7056 8.812513 ACTTTGACCAATTCATGATATTCAGA 57.187 30.769 0.00 0.00 32.84 3.27
3648 7057 9.512435 GAACTTTGACCAATTCATGATATTCAG 57.488 33.333 0.00 0.00 32.84 3.02
3649 7058 9.022884 TGAACTTTGACCAATTCATGATATTCA 57.977 29.630 0.00 0.00 32.84 2.57
3650 7059 9.859427 TTGAACTTTGACCAATTCATGATATTC 57.141 29.630 0.00 0.00 32.84 1.75
3654 7063 8.961294 TTTTTGAACTTTGACCAATTCATGAT 57.039 26.923 0.00 0.00 32.84 2.45
3655 7064 8.040132 ACTTTTTGAACTTTGACCAATTCATGA 58.960 29.630 0.00 0.00 32.84 3.07
3656 7065 8.200364 ACTTTTTGAACTTTGACCAATTCATG 57.800 30.769 0.00 0.00 32.84 3.07
3657 7066 8.667463 CAACTTTTTGAACTTTGACCAATTCAT 58.333 29.630 1.18 0.00 34.24 2.57
3658 7067 7.118971 CCAACTTTTTGAACTTTGACCAATTCA 59.881 33.333 0.00 0.00 34.24 2.57
3659 7068 7.333174 TCCAACTTTTTGAACTTTGACCAATTC 59.667 33.333 0.00 0.00 34.24 2.17
3660 7069 7.119116 GTCCAACTTTTTGAACTTTGACCAATT 59.881 33.333 0.00 0.00 34.24 2.32
3661 7070 6.593770 GTCCAACTTTTTGAACTTTGACCAAT 59.406 34.615 0.00 0.00 34.24 3.16
3662 7071 5.929415 GTCCAACTTTTTGAACTTTGACCAA 59.071 36.000 0.00 0.00 34.24 3.67
3663 7072 5.245075 AGTCCAACTTTTTGAACTTTGACCA 59.755 36.000 0.00 0.00 34.24 4.02
3664 7073 5.720202 AGTCCAACTTTTTGAACTTTGACC 58.280 37.500 0.00 0.00 34.24 4.02
3665 7074 8.807581 CATAAGTCCAACTTTTTGAACTTTGAC 58.192 33.333 0.00 0.00 39.51 3.18
3666 7075 8.744652 TCATAAGTCCAACTTTTTGAACTTTGA 58.255 29.630 0.00 0.00 39.51 2.69
3667 7076 8.925161 TCATAAGTCCAACTTTTTGAACTTTG 57.075 30.769 0.00 0.00 39.51 2.77
3668 7077 9.936759 TTTCATAAGTCCAACTTTTTGAACTTT 57.063 25.926 13.17 0.00 38.09 2.66
3669 7078 9.936759 TTTTCATAAGTCCAACTTTTTGAACTT 57.063 25.926 13.17 0.00 38.09 2.66
3672 7081 9.541143 GGATTTTCATAAGTCCAACTTTTTGAA 57.459 29.630 11.02 11.02 39.51 2.69
3673 7082 8.923270 AGGATTTTCATAAGTCCAACTTTTTGA 58.077 29.630 0.00 0.39 41.36 2.69
3676 7085 9.807921 TCTAGGATTTTCATAAGTCCAACTTTT 57.192 29.630 0.00 0.00 41.36 2.27
3677 7086 9.807921 TTCTAGGATTTTCATAAGTCCAACTTT 57.192 29.630 0.00 0.00 41.36 2.66
3678 7087 9.232473 GTTCTAGGATTTTCATAAGTCCAACTT 57.768 33.333 0.00 0.00 41.36 2.66
3679 7088 8.606830 AGTTCTAGGATTTTCATAAGTCCAACT 58.393 33.333 0.00 0.00 41.36 3.16
3680 7089 8.794335 AGTTCTAGGATTTTCATAAGTCCAAC 57.206 34.615 0.00 0.00 41.36 3.77
3681 7090 9.449719 GAAGTTCTAGGATTTTCATAAGTCCAA 57.550 33.333 0.00 0.00 41.36 3.53
3682 7091 8.602424 TGAAGTTCTAGGATTTTCATAAGTCCA 58.398 33.333 4.17 0.00 41.36 4.02
3683 7092 8.884726 GTGAAGTTCTAGGATTTTCATAAGTCC 58.115 37.037 4.17 0.00 39.72 3.85
3684 7093 9.660180 AGTGAAGTTCTAGGATTTTCATAAGTC 57.340 33.333 4.17 0.00 31.28 3.01
3692 7101 9.807921 TCCAAAATAGTGAAGTTCTAGGATTTT 57.192 29.630 4.17 8.06 0.00 1.82
3693 7102 9.807921 TTCCAAAATAGTGAAGTTCTAGGATTT 57.192 29.630 4.17 2.81 0.00 2.17
3694 7103 9.232473 GTTCCAAAATAGTGAAGTTCTAGGATT 57.768 33.333 4.17 0.00 0.00 3.01
3695 7104 8.383175 TGTTCCAAAATAGTGAAGTTCTAGGAT 58.617 33.333 4.17 0.00 0.00 3.24
3696 7105 7.741785 TGTTCCAAAATAGTGAAGTTCTAGGA 58.258 34.615 4.17 0.00 0.00 2.94
3697 7106 7.979444 TGTTCCAAAATAGTGAAGTTCTAGG 57.021 36.000 4.17 0.00 0.00 3.02
3698 7107 9.884465 CTTTGTTCCAAAATAGTGAAGTTCTAG 57.116 33.333 4.17 0.00 0.00 2.43
3699 7108 8.846211 CCTTTGTTCCAAAATAGTGAAGTTCTA 58.154 33.333 4.17 0.00 0.00 2.10
3700 7109 7.201911 CCCTTTGTTCCAAAATAGTGAAGTTCT 60.202 37.037 4.17 0.00 0.00 3.01
3701 7110 6.923508 CCCTTTGTTCCAAAATAGTGAAGTTC 59.076 38.462 0.00 0.00 0.00 3.01
3702 7111 6.609616 TCCCTTTGTTCCAAAATAGTGAAGTT 59.390 34.615 0.00 0.00 0.00 2.66
3703 7112 6.133356 TCCCTTTGTTCCAAAATAGTGAAGT 58.867 36.000 0.00 0.00 0.00 3.01
3704 7113 6.265422 ACTCCCTTTGTTCCAAAATAGTGAAG 59.735 38.462 0.00 0.00 0.00 3.02
3705 7114 6.133356 ACTCCCTTTGTTCCAAAATAGTGAA 58.867 36.000 0.00 0.00 0.00 3.18
3706 7115 5.701224 ACTCCCTTTGTTCCAAAATAGTGA 58.299 37.500 0.00 0.00 0.00 3.41
3707 7116 6.348213 CGTACTCCCTTTGTTCCAAAATAGTG 60.348 42.308 0.00 0.00 0.00 2.74
3708 7117 5.704053 CGTACTCCCTTTGTTCCAAAATAGT 59.296 40.000 0.00 0.00 0.00 2.12
3709 7118 5.704053 ACGTACTCCCTTTGTTCCAAAATAG 59.296 40.000 0.00 0.00 0.00 1.73
3710 7119 5.623169 ACGTACTCCCTTTGTTCCAAAATA 58.377 37.500 0.00 0.00 0.00 1.40
3711 7120 4.466827 ACGTACTCCCTTTGTTCCAAAAT 58.533 39.130 0.00 0.00 0.00 1.82
3712 7121 3.888583 ACGTACTCCCTTTGTTCCAAAA 58.111 40.909 0.00 0.00 0.00 2.44
3713 7122 3.564053 ACGTACTCCCTTTGTTCCAAA 57.436 42.857 0.00 0.00 0.00 3.28
3714 7123 3.118334 TGAACGTACTCCCTTTGTTCCAA 60.118 43.478 0.00 0.00 38.46 3.53
3715 7124 2.435069 TGAACGTACTCCCTTTGTTCCA 59.565 45.455 0.00 0.00 38.46 3.53
3716 7125 3.116079 TGAACGTACTCCCTTTGTTCC 57.884 47.619 0.00 0.00 38.46 3.62
3717 7126 4.151867 GTGATGAACGTACTCCCTTTGTTC 59.848 45.833 0.00 0.00 39.40 3.18
3718 7127 4.062991 GTGATGAACGTACTCCCTTTGTT 58.937 43.478 0.00 0.00 0.00 2.83
3719 7128 3.556423 GGTGATGAACGTACTCCCTTTGT 60.556 47.826 0.00 0.00 0.00 2.83
3720 7129 3.000727 GGTGATGAACGTACTCCCTTTG 58.999 50.000 0.00 0.00 0.00 2.77
3721 7130 2.635915 TGGTGATGAACGTACTCCCTTT 59.364 45.455 0.00 0.00 0.00 3.11
3722 7131 2.253610 TGGTGATGAACGTACTCCCTT 58.746 47.619 0.00 0.00 0.00 3.95
3723 7132 1.933021 TGGTGATGAACGTACTCCCT 58.067 50.000 0.00 0.00 0.00 4.20
3724 7133 2.431057 AGATGGTGATGAACGTACTCCC 59.569 50.000 0.00 0.00 0.00 4.30
3725 7134 3.802948 AGATGGTGATGAACGTACTCC 57.197 47.619 0.00 0.00 0.00 3.85
3726 7135 6.331061 ACTTAAGATGGTGATGAACGTACTC 58.669 40.000 10.09 0.00 0.00 2.59
3727 7136 6.282199 ACTTAAGATGGTGATGAACGTACT 57.718 37.500 10.09 0.00 0.00 2.73
3728 7137 5.229469 CGACTTAAGATGGTGATGAACGTAC 59.771 44.000 10.09 0.00 0.00 3.67
3729 7138 5.124297 TCGACTTAAGATGGTGATGAACGTA 59.876 40.000 10.09 0.00 0.00 3.57
3730 7139 4.082408 TCGACTTAAGATGGTGATGAACGT 60.082 41.667 10.09 0.00 0.00 3.99
3731 7140 4.421058 TCGACTTAAGATGGTGATGAACG 58.579 43.478 10.09 0.00 0.00 3.95
3732 7141 4.806247 CCTCGACTTAAGATGGTGATGAAC 59.194 45.833 10.09 0.00 0.00 3.18
3733 7142 4.141937 CCCTCGACTTAAGATGGTGATGAA 60.142 45.833 10.09 0.00 0.00 2.57
3734 7143 3.384789 CCCTCGACTTAAGATGGTGATGA 59.615 47.826 10.09 0.00 0.00 2.92
3735 7144 3.722147 CCCTCGACTTAAGATGGTGATG 58.278 50.000 10.09 0.00 0.00 3.07
3736 7145 2.103263 GCCCTCGACTTAAGATGGTGAT 59.897 50.000 10.09 0.00 0.00 3.06
3737 7146 1.480954 GCCCTCGACTTAAGATGGTGA 59.519 52.381 10.09 0.00 0.00 4.02
3738 7147 1.802880 CGCCCTCGACTTAAGATGGTG 60.803 57.143 10.09 4.82 38.10 4.17
3739 7148 0.460311 CGCCCTCGACTTAAGATGGT 59.540 55.000 10.09 0.00 38.10 3.55
3740 7149 0.744874 TCGCCCTCGACTTAAGATGG 59.255 55.000 10.09 5.31 40.21 3.51
3741 7150 2.194271 GTTCGCCCTCGACTTAAGATG 58.806 52.381 10.09 0.74 45.43 2.90
3742 7151 1.136500 GGTTCGCCCTCGACTTAAGAT 59.864 52.381 10.09 0.00 45.43 2.40
3743 7152 0.529378 GGTTCGCCCTCGACTTAAGA 59.471 55.000 10.09 0.00 45.43 2.10
3744 7153 0.245539 TGGTTCGCCCTCGACTTAAG 59.754 55.000 0.00 0.00 45.43 1.85
3745 7154 0.899720 ATGGTTCGCCCTCGACTTAA 59.100 50.000 0.00 0.00 45.43 1.85
3746 7155 0.174845 CATGGTTCGCCCTCGACTTA 59.825 55.000 0.00 0.00 45.43 2.24
3747 7156 1.079127 CATGGTTCGCCCTCGACTT 60.079 57.895 0.00 0.00 45.43 3.01
3748 7157 2.579201 CATGGTTCGCCCTCGACT 59.421 61.111 0.00 0.00 45.43 4.18
3749 7158 2.511600 CCATGGTTCGCCCTCGAC 60.512 66.667 2.57 0.00 45.43 4.20
3750 7159 3.781307 CCCATGGTTCGCCCTCGA 61.781 66.667 11.73 0.00 43.89 4.04
3751 7160 4.096003 ACCCATGGTTCGCCCTCG 62.096 66.667 11.73 0.00 36.08 4.63
3752 7161 1.335132 TAGACCCATGGTTCGCCCTC 61.335 60.000 11.73 0.00 35.25 4.30
3753 7162 1.306654 TAGACCCATGGTTCGCCCT 60.307 57.895 11.73 0.91 35.25 5.19
3754 7163 1.153229 GTAGACCCATGGTTCGCCC 60.153 63.158 11.73 0.00 35.25 6.13
3755 7164 1.153229 GGTAGACCCATGGTTCGCC 60.153 63.158 11.73 10.36 35.25 5.54
3756 7165 0.462047 CAGGTAGACCCATGGTTCGC 60.462 60.000 11.73 4.71 35.25 4.70
3757 7166 1.191535 TCAGGTAGACCCATGGTTCG 58.808 55.000 11.73 0.00 35.25 3.95
3758 7167 3.545703 CATTCAGGTAGACCCATGGTTC 58.454 50.000 11.73 5.98 35.25 3.62
3759 7168 2.242196 CCATTCAGGTAGACCCATGGTT 59.758 50.000 11.73 0.00 35.25 3.67
3760 7169 1.846439 CCATTCAGGTAGACCCATGGT 59.154 52.381 11.73 0.00 39.44 3.55
3761 7170 1.477558 GCCATTCAGGTAGACCCATGG 60.478 57.143 4.14 4.14 39.69 3.66
3762 7171 1.477558 GGCCATTCAGGTAGACCCATG 60.478 57.143 0.00 0.00 40.61 3.66
3763 7172 0.846693 GGCCATTCAGGTAGACCCAT 59.153 55.000 0.00 0.00 40.61 4.00
3764 7173 0.548926 TGGCCATTCAGGTAGACCCA 60.549 55.000 0.00 0.00 40.61 4.51
3765 7174 0.181350 CTGGCCATTCAGGTAGACCC 59.819 60.000 5.51 0.00 40.61 4.46
3766 7175 0.464554 GCTGGCCATTCAGGTAGACC 60.465 60.000 5.51 0.00 40.61 3.85
3767 7176 0.253044 TGCTGGCCATTCAGGTAGAC 59.747 55.000 5.51 0.00 40.61 2.59
3768 7177 0.543277 CTGCTGGCCATTCAGGTAGA 59.457 55.000 21.34 0.00 40.61 2.59
3769 7178 0.465097 CCTGCTGGCCATTCAGGTAG 60.465 60.000 31.37 18.78 41.76 3.18
3770 7179 1.609239 CCTGCTGGCCATTCAGGTA 59.391 57.895 31.37 11.63 41.76 3.08
3771 7180 2.357836 CCTGCTGGCCATTCAGGT 59.642 61.111 31.37 0.00 41.76 4.00
3773 7182 2.707849 GCACCTGCTGGCCATTCAG 61.708 63.158 21.87 21.87 38.21 3.02
3774 7183 2.677524 GCACCTGCTGGCCATTCA 60.678 61.111 5.51 6.80 38.21 2.57
3784 7193 0.869730 CCAAAAATGCAAGCACCTGC 59.130 50.000 0.00 0.00 42.95 4.85
3785 7194 1.202675 ACCCAAAAATGCAAGCACCTG 60.203 47.619 0.00 0.00 0.00 4.00
3786 7195 1.130777 ACCCAAAAATGCAAGCACCT 58.869 45.000 0.00 0.00 0.00 4.00
3787 7196 1.228533 CACCCAAAAATGCAAGCACC 58.771 50.000 0.00 0.00 0.00 5.01
3788 7197 1.598601 CACACCCAAAAATGCAAGCAC 59.401 47.619 0.00 0.00 0.00 4.40
3789 7198 1.209019 ACACACCCAAAAATGCAAGCA 59.791 42.857 0.00 0.00 0.00 3.91
3790 7199 1.952193 ACACACCCAAAAATGCAAGC 58.048 45.000 0.00 0.00 0.00 4.01
3791 7200 3.389221 GGTACACACCCAAAAATGCAAG 58.611 45.455 0.00 0.00 39.11 4.01
3792 7201 3.460857 GGTACACACCCAAAAATGCAA 57.539 42.857 0.00 0.00 39.11 4.08
3818 7227 1.782569 CATGTTTTTGTCGCTGTGCAG 59.217 47.619 0.00 0.00 0.00 4.41
3827 7236 4.157840 GGGTCATAGGGTCATGTTTTTGTC 59.842 45.833 0.00 0.00 0.00 3.18
3829 7238 4.344104 AGGGTCATAGGGTCATGTTTTTG 58.656 43.478 0.00 0.00 0.00 2.44
3835 7244 5.532406 CACATTTAAGGGTCATAGGGTCATG 59.468 44.000 0.00 0.00 0.00 3.07
3838 7247 5.123936 GTCACATTTAAGGGTCATAGGGTC 58.876 45.833 0.00 0.00 0.00 4.46
3840 7249 4.127171 CGTCACATTTAAGGGTCATAGGG 58.873 47.826 0.00 0.00 0.00 3.53
3844 7253 2.574369 TCCCGTCACATTTAAGGGTCAT 59.426 45.455 0.00 0.00 42.57 3.06
3845 7254 1.979308 TCCCGTCACATTTAAGGGTCA 59.021 47.619 0.00 0.00 42.57 4.02
3846 7255 2.289819 TGTCCCGTCACATTTAAGGGTC 60.290 50.000 0.00 0.00 42.57 4.46
3847 7256 1.700739 TGTCCCGTCACATTTAAGGGT 59.299 47.619 0.00 0.00 42.57 4.34
3848 7257 2.081462 GTGTCCCGTCACATTTAAGGG 58.919 52.381 0.00 0.00 43.32 3.95
3849 7258 2.742053 CAGTGTCCCGTCACATTTAAGG 59.258 50.000 0.00 0.00 40.37 2.69
3850 7259 3.399330 ACAGTGTCCCGTCACATTTAAG 58.601 45.455 0.00 0.00 40.37 1.85
3851 7260 3.478857 ACAGTGTCCCGTCACATTTAA 57.521 42.857 0.00 0.00 40.37 1.52
3852 7261 3.306225 GGTACAGTGTCCCGTCACATTTA 60.306 47.826 0.00 0.00 40.37 1.40
3853 7262 2.549349 GGTACAGTGTCCCGTCACATTT 60.549 50.000 0.00 0.00 40.37 2.32
3854 7263 1.001633 GGTACAGTGTCCCGTCACATT 59.998 52.381 0.00 0.00 40.37 2.71
3855 7264 0.606604 GGTACAGTGTCCCGTCACAT 59.393 55.000 0.00 0.00 40.37 3.21
3856 7265 0.756070 TGGTACAGTGTCCCGTCACA 60.756 55.000 0.00 0.00 40.37 3.58
3857 7266 0.390124 TTGGTACAGTGTCCCGTCAC 59.610 55.000 0.00 0.00 42.39 3.67
3858 7267 0.390124 GTTGGTACAGTGTCCCGTCA 59.610 55.000 0.00 0.00 42.39 4.35
3861 7270 3.604875 ATAAGTTGGTACAGTGTCCCG 57.395 47.619 0.00 0.00 42.39 5.14
3868 7277 7.270047 TCCGGAATAGAAATAAGTTGGTACAG 58.730 38.462 0.00 0.00 42.39 2.74
3872 7281 9.117183 GTATTTCCGGAATAGAAATAAGTTGGT 57.883 33.333 19.62 0.00 43.94 3.67
3873 7282 9.338622 AGTATTTCCGGAATAGAAATAAGTTGG 57.661 33.333 19.62 0.00 43.94 3.77
3884 7293 7.786178 TTGATGTCAAGTATTTCCGGAATAG 57.214 36.000 19.62 4.82 31.01 1.73
3886 7295 7.461182 TTTTGATGTCAAGTATTTCCGGAAT 57.539 32.000 19.62 10.81 37.15 3.01
3889 7298 6.851609 TCATTTTGATGTCAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.15 5.14
3890 7299 8.915871 ATTCATTTTGATGTCAAGTATTTCCG 57.084 30.769 0.00 0.00 37.15 4.30
3897 7306 9.918630 CCTCTTTTATTCATTTTGATGTCAAGT 57.081 29.630 0.00 0.00 37.15 3.16
3961 8767 9.421806 TCGTCCGAAAATACTTGTTAGATAAAA 57.578 29.630 0.00 0.00 0.00 1.52
3963 8769 8.984891 TTCGTCCGAAAATACTTGTTAGATAA 57.015 30.769 0.00 0.00 0.00 1.75
3964 8770 7.703621 CCTTCGTCCGAAAATACTTGTTAGATA 59.296 37.037 3.52 0.00 33.34 1.98
3967 9421 5.063060 CCCTTCGTCCGAAAATACTTGTTAG 59.937 44.000 3.52 0.00 33.34 2.34
3970 9424 3.007182 TCCCTTCGTCCGAAAATACTTGT 59.993 43.478 3.52 0.00 33.34 3.16
3979 9433 3.702548 TCTTGATATTCCCTTCGTCCGAA 59.297 43.478 1.81 1.81 0.00 4.30
3981 9435 3.728076 TCTTGATATTCCCTTCGTCCG 57.272 47.619 0.00 0.00 0.00 4.79
3982 9436 4.811557 CAGTTCTTGATATTCCCTTCGTCC 59.188 45.833 0.00 0.00 0.00 4.79
3985 9439 3.561725 GCCAGTTCTTGATATTCCCTTCG 59.438 47.826 0.00 0.00 0.00 3.79
3990 9444 4.965119 AAACGCCAGTTCTTGATATTCC 57.035 40.909 0.00 0.00 40.18 3.01
3991 9445 7.484035 AGATAAACGCCAGTTCTTGATATTC 57.516 36.000 0.00 0.00 40.18 1.75
3992 9446 7.865706 AAGATAAACGCCAGTTCTTGATATT 57.134 32.000 0.00 0.00 40.18 1.28
3994 9448 7.412563 CGAAAAGATAAACGCCAGTTCTTGATA 60.413 37.037 0.00 0.00 40.18 2.15
3996 9450 5.333798 CGAAAAGATAAACGCCAGTTCTTGA 60.334 40.000 0.00 0.00 40.18 3.02
3997 9451 4.846137 CGAAAAGATAAACGCCAGTTCTTG 59.154 41.667 0.00 0.00 40.18 3.02
4000 9454 4.657075 TCGAAAAGATAAACGCCAGTTC 57.343 40.909 0.00 0.00 40.18 3.01
4001 9455 5.427036 TTTCGAAAAGATAAACGCCAGTT 57.573 34.783 8.44 0.00 43.50 3.16
4002 9456 4.612939 GCTTTCGAAAAGATAAACGCCAGT 60.613 41.667 12.41 0.00 0.00 4.00
4003 9457 3.846335 GCTTTCGAAAAGATAAACGCCAG 59.154 43.478 12.41 0.00 0.00 4.85
4004 9458 3.251245 TGCTTTCGAAAAGATAAACGCCA 59.749 39.130 12.41 0.00 0.00 5.69
4007 9461 6.300902 CACTCTTGCTTTCGAAAAGATAAACG 59.699 38.462 12.41 3.01 29.96 3.60
4008 9462 6.578919 CCACTCTTGCTTTCGAAAAGATAAAC 59.421 38.462 12.41 0.00 29.96 2.01
4009 9463 6.668323 CCACTCTTGCTTTCGAAAAGATAAA 58.332 36.000 12.41 1.84 29.96 1.40
4010 9464 5.334879 GCCACTCTTGCTTTCGAAAAGATAA 60.335 40.000 12.41 4.22 29.96 1.75
4012 9466 3.057946 GCCACTCTTGCTTTCGAAAAGAT 60.058 43.478 12.41 0.77 29.96 2.40
4013 9467 2.290641 GCCACTCTTGCTTTCGAAAAGA 59.709 45.455 12.41 10.86 0.00 2.52
4015 9469 2.020720 TGCCACTCTTGCTTTCGAAAA 58.979 42.857 12.41 0.00 0.00 2.29
4016 9470 1.674359 TGCCACTCTTGCTTTCGAAA 58.326 45.000 10.71 10.71 0.00 3.46
4017 9471 1.896220 ATGCCACTCTTGCTTTCGAA 58.104 45.000 0.00 0.00 0.00 3.71
4020 9474 3.648339 TTCAATGCCACTCTTGCTTTC 57.352 42.857 0.00 0.00 0.00 2.62
4021 9475 3.638160 TCTTTCAATGCCACTCTTGCTTT 59.362 39.130 0.00 0.00 0.00 3.51
4022 9476 3.225104 TCTTTCAATGCCACTCTTGCTT 58.775 40.909 0.00 0.00 0.00 3.91
4023 9477 2.867624 TCTTTCAATGCCACTCTTGCT 58.132 42.857 0.00 0.00 0.00 3.91
4024 9478 3.243501 TGTTCTTTCAATGCCACTCTTGC 60.244 43.478 0.00 0.00 0.00 4.01
4033 9811 2.288395 CCACAGGGTGTTCTTTCAATGC 60.288 50.000 0.00 0.00 0.00 3.56
4035 9813 3.593442 TCCACAGGGTGTTCTTTCAAT 57.407 42.857 0.00 0.00 34.93 2.57
4039 9817 1.215423 AGCTTCCACAGGGTGTTCTTT 59.785 47.619 0.00 0.00 34.93 2.52
4045 9823 3.695830 TTTAGTAGCTTCCACAGGGTG 57.304 47.619 0.00 0.00 34.93 4.61
4047 9825 5.353394 TGTATTTAGTAGCTTCCACAGGG 57.647 43.478 0.00 0.00 0.00 4.45
4048 9826 4.811557 GCTGTATTTAGTAGCTTCCACAGG 59.188 45.833 0.00 0.00 34.21 4.00
4084 9862 3.640967 TGCCCTATTTTTGTCTTTGCTGT 59.359 39.130 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.