Multiple sequence alignment - TraesCS3D01G378900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G378900 chr3D 100.000 4643 0 0 1 4643 496069836 496074478 0.000000e+00 8575
1 TraesCS3D01G378900 chr3D 97.312 186 5 0 4455 4640 496096573 496096758 2.700000e-82 316
2 TraesCS3D01G378900 chr3B 85.186 3139 193 108 1 3013 655026700 655029692 0.000000e+00 2970
3 TraesCS3D01G378900 chr3B 84.704 1484 111 48 3048 4456 655029686 655031128 0.000000e+00 1376
4 TraesCS3D01G378900 chr3A 88.938 2034 109 48 2472 4456 635326863 635328829 0.000000e+00 2403
5 TraesCS3D01G378900 chr3A 84.553 2091 127 81 432 2420 635324855 635326851 0.000000e+00 1892
6 TraesCS3D01G378900 chr3A 86.311 599 50 20 3540 4131 648830575 648830002 1.420000e-174 623
7 TraesCS3D01G378900 chr3A 80.761 473 39 20 1 440 635322356 635322809 5.800000e-84 322
8 TraesCS3D01G378900 chr1B 87.925 588 38 20 3532 4111 635834943 635835505 0.000000e+00 662
9 TraesCS3D01G378900 chr1B 89.623 212 19 2 1184 1392 486848842 486848631 2.750000e-67 267
10 TraesCS3D01G378900 chr1B 86.000 150 15 6 2471 2619 486847691 486847547 6.220000e-34 156
11 TraesCS3D01G378900 chr4B 87.312 599 40 22 3540 4131 147476477 147477046 0.000000e+00 652
12 TraesCS3D01G378900 chr7B 86.935 597 50 17 3540 4131 72009480 72008907 0.000000e+00 645
13 TraesCS3D01G378900 chr7B 82.632 190 29 3 4455 4642 485837315 485837502 1.030000e-36 165
14 TraesCS3D01G378900 chr6A 86.184 608 52 19 3532 4131 152859235 152859818 3.050000e-176 628
15 TraesCS3D01G378900 chr7A 86.000 600 52 20 3540 4131 645837947 645838522 8.540000e-172 614
16 TraesCS3D01G378900 chr7A 83.158 190 28 3 4455 4642 195138734 195138921 2.220000e-38 171
17 TraesCS3D01G378900 chr1A 85.667 600 52 23 3540 4131 77926734 77927307 6.650000e-168 601
18 TraesCS3D01G378900 chr1A 83.279 305 39 10 1100 1392 462778467 462778163 2.130000e-68 270
19 TraesCS3D01G378900 chr1D 93.651 189 12 0 4455 4643 101442154 101442342 2.730000e-72 283
20 TraesCS3D01G378900 chr1D 93.122 189 13 0 4455 4643 101454212 101454400 1.270000e-70 278
21 TraesCS3D01G378900 chr1D 87.793 213 21 5 1184 1392 363621541 363621330 1.290000e-60 244
22 TraesCS3D01G378900 chr1D 87.786 131 14 2 2490 2619 363620382 363620253 8.050000e-33 152
23 TraesCS3D01G378900 chr2A 82.011 189 28 5 4455 4640 600511631 600511816 6.220000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G378900 chr3D 496069836 496074478 4642 False 8575.0 8575 100.000000 1 4643 1 chr3D.!!$F1 4642
1 TraesCS3D01G378900 chr3B 655026700 655031128 4428 False 2173.0 2970 84.945000 1 4456 2 chr3B.!!$F1 4455
2 TraesCS3D01G378900 chr3A 635322356 635328829 6473 False 1539.0 2403 84.750667 1 4456 3 chr3A.!!$F1 4455
3 TraesCS3D01G378900 chr3A 648830002 648830575 573 True 623.0 623 86.311000 3540 4131 1 chr3A.!!$R1 591
4 TraesCS3D01G378900 chr1B 635834943 635835505 562 False 662.0 662 87.925000 3532 4111 1 chr1B.!!$F1 579
5 TraesCS3D01G378900 chr1B 486847547 486848842 1295 True 211.5 267 87.811500 1184 2619 2 chr1B.!!$R1 1435
6 TraesCS3D01G378900 chr4B 147476477 147477046 569 False 652.0 652 87.312000 3540 4131 1 chr4B.!!$F1 591
7 TraesCS3D01G378900 chr7B 72008907 72009480 573 True 645.0 645 86.935000 3540 4131 1 chr7B.!!$R1 591
8 TraesCS3D01G378900 chr6A 152859235 152859818 583 False 628.0 628 86.184000 3532 4131 1 chr6A.!!$F1 599
9 TraesCS3D01G378900 chr7A 645837947 645838522 575 False 614.0 614 86.000000 3540 4131 1 chr7A.!!$F2 591
10 TraesCS3D01G378900 chr1A 77926734 77927307 573 False 601.0 601 85.667000 3540 4131 1 chr1A.!!$F1 591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 321 0.179145 TTAACTAGAGCCGCGCTGAC 60.179 55.0 5.56 0.00 39.88 3.51 F
468 2575 0.464452 AGTATGGGAGTAGCGCCAAC 59.536 55.0 2.29 2.33 0.00 3.77 F
1639 3823 0.108138 CAGTCTAGCTTGGTTCGGGG 60.108 60.0 0.00 0.00 0.00 5.73 F
2916 5418 0.036952 TTGAGCTGCACTGCTACTCC 60.037 55.0 16.53 0.00 44.17 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1535 3719 0.108898 AGCTCGAAGTAGTGCTGCTG 60.109 55.0 0.00 0.0 39.20 4.41 R
2454 4882 0.339859 ACCATGAGCCCTCCTAGACA 59.660 55.0 0.00 0.0 0.00 3.41 R
3049 5554 0.519999 GCTTTGCTCGCACAAGATCG 60.520 55.0 13.91 0.0 0.00 3.69 R
4617 7235 0.242286 CGCCGTGATCCTCTGGATAG 59.758 60.0 0.00 0.0 43.27 2.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 2.123854 CCCCATGCATGCAGAGCT 60.124 61.111 26.69 6.06 0.00 4.09
59 60 3.285215 GAGCTGATGGGCCATGCG 61.285 66.667 26.77 15.29 0.00 4.73
66 67 4.429522 TGGGCCATGCGCATGTCT 62.430 61.111 39.70 12.76 46.09 3.41
82 83 0.727122 GTCTCGACCCAACACGTACG 60.727 60.000 15.01 15.01 0.00 3.67
83 84 1.165907 TCTCGACCCAACACGTACGT 61.166 55.000 16.72 16.72 0.00 3.57
84 85 0.516877 CTCGACCCAACACGTACGTA 59.483 55.000 22.34 0.59 0.00 3.57
85 86 0.516877 TCGACCCAACACGTACGTAG 59.483 55.000 22.34 17.19 0.00 3.51
87 88 1.463056 CGACCCAACACGTACGTAGTA 59.537 52.381 22.34 0.00 45.11 1.82
202 229 0.389166 GAGGACTGTCAGAGGCGTTG 60.389 60.000 6.91 0.00 0.00 4.10
206 233 0.249911 ACTGTCAGAGGCGTTGGTTC 60.250 55.000 6.91 0.00 0.00 3.62
207 234 1.284982 CTGTCAGAGGCGTTGGTTCG 61.285 60.000 0.00 0.00 0.00 3.95
209 236 1.006571 TCAGAGGCGTTGGTTCGTC 60.007 57.895 0.00 0.00 35.56 4.20
254 285 1.224592 ATCCGCGGGATTTGAGCTT 59.775 52.632 27.83 0.00 39.79 3.74
256 287 2.764314 CCGCGGGATTTGAGCTTGG 61.764 63.158 20.10 0.00 0.00 3.61
259 290 1.937546 GCGGGATTTGAGCTTGGGTG 61.938 60.000 0.00 0.00 0.00 4.61
260 291 0.609131 CGGGATTTGAGCTTGGGTGT 60.609 55.000 0.00 0.00 0.00 4.16
261 292 1.339631 CGGGATTTGAGCTTGGGTGTA 60.340 52.381 0.00 0.00 0.00 2.90
262 293 2.369394 GGGATTTGAGCTTGGGTGTAG 58.631 52.381 0.00 0.00 0.00 2.74
263 294 2.290960 GGGATTTGAGCTTGGGTGTAGT 60.291 50.000 0.00 0.00 0.00 2.73
264 295 2.749621 GGATTTGAGCTTGGGTGTAGTG 59.250 50.000 0.00 0.00 0.00 2.74
265 296 3.412386 GATTTGAGCTTGGGTGTAGTGT 58.588 45.455 0.00 0.00 0.00 3.55
266 297 4.564821 GGATTTGAGCTTGGGTGTAGTGTA 60.565 45.833 0.00 0.00 0.00 2.90
267 298 4.634012 TTTGAGCTTGGGTGTAGTGTAT 57.366 40.909 0.00 0.00 0.00 2.29
268 299 4.634012 TTGAGCTTGGGTGTAGTGTATT 57.366 40.909 0.00 0.00 0.00 1.89
269 300 3.937814 TGAGCTTGGGTGTAGTGTATTG 58.062 45.455 0.00 0.00 0.00 1.90
272 303 5.179452 AGCTTGGGTGTAGTGTATTGATT 57.821 39.130 0.00 0.00 0.00 2.57
290 321 0.179145 TTAACTAGAGCCGCGCTGAC 60.179 55.000 5.56 0.00 39.88 3.51
300 331 1.153958 CGCGCTGACAGTGAGATCA 60.154 57.895 20.12 0.00 0.00 2.92
333 367 1.520342 CTAGCTTCACTGCCCGAGC 60.520 63.158 0.00 0.00 40.48 5.03
335 369 1.949847 TAGCTTCACTGCCCGAGCTC 61.950 60.000 2.73 2.73 43.86 4.09
363 414 3.327404 CGGCTAGGTGGGTGGGTT 61.327 66.667 0.00 0.00 0.00 4.11
370 421 1.605451 GGTGGGTGGGTTGTTAGCC 60.605 63.158 0.00 0.00 42.46 3.93
376 427 3.663202 GGGTTGTTAGCCCGTGTG 58.337 61.111 0.00 0.00 36.30 3.82
377 428 2.622962 GGGTTGTTAGCCCGTGTGC 61.623 63.158 0.00 0.00 36.30 4.57
404 455 4.408182 ACAAGATCCACTGGTAGCATAC 57.592 45.455 0.00 0.00 42.04 2.39
407 458 3.647636 AGATCCACTGGTAGCATACAGT 58.352 45.455 0.00 1.91 45.43 3.55
409 460 4.585162 AGATCCACTGGTAGCATACAGTAC 59.415 45.833 6.84 0.00 45.43 2.73
410 461 3.977312 TCCACTGGTAGCATACAGTACT 58.023 45.455 6.84 0.00 45.43 2.73
411 462 5.120054 TCCACTGGTAGCATACAGTACTA 57.880 43.478 0.00 0.00 45.43 1.82
412 463 5.131067 TCCACTGGTAGCATACAGTACTAG 58.869 45.833 0.00 0.00 45.43 2.57
413 464 5.104235 TCCACTGGTAGCATACAGTACTAGA 60.104 44.000 0.00 0.00 45.43 2.43
414 465 5.593095 CCACTGGTAGCATACAGTACTAGAA 59.407 44.000 0.00 0.00 45.43 2.10
415 466 6.265649 CCACTGGTAGCATACAGTACTAGAAT 59.734 42.308 0.00 0.00 45.43 2.40
416 467 7.447545 CCACTGGTAGCATACAGTACTAGAATA 59.552 40.741 0.00 0.00 45.43 1.75
417 468 9.015367 CACTGGTAGCATACAGTACTAGAATAT 57.985 37.037 0.00 0.00 45.43 1.28
468 2575 0.464452 AGTATGGGAGTAGCGCCAAC 59.536 55.000 2.29 2.33 0.00 3.77
475 2582 2.820037 GTAGCGCCAACAGCTCCC 60.820 66.667 2.29 0.00 44.79 4.30
495 2602 2.300623 GTGCATTACGATTCGATGCC 57.699 50.000 22.42 13.88 44.15 4.40
496 2603 1.069906 GTGCATTACGATTCGATGCCC 60.070 52.381 22.42 12.62 44.15 5.36
497 2604 1.202639 TGCATTACGATTCGATGCCCT 60.203 47.619 22.42 1.04 44.15 5.19
498 2605 2.036604 TGCATTACGATTCGATGCCCTA 59.963 45.455 22.42 8.11 44.15 3.53
518 2625 2.727123 ATGCCGTATTGACCAATCCA 57.273 45.000 0.00 0.00 32.50 3.41
572 2683 1.004277 GACATATTCTCTCCCGCGCG 61.004 60.000 25.67 25.67 0.00 6.86
573 2684 2.049063 ATATTCTCTCCCGCGCGC 60.049 61.111 27.36 23.91 0.00 6.86
574 2685 3.898627 ATATTCTCTCCCGCGCGCG 62.899 63.158 43.73 43.73 39.44 6.86
608 2719 1.615392 CCCTGGCTGAAACCTTGAAAG 59.385 52.381 0.00 0.00 0.00 2.62
609 2720 1.000171 CCTGGCTGAAACCTTGAAAGC 60.000 52.381 0.00 0.00 0.00 3.51
617 2728 1.534729 AACCTTGAAAGCCATCCGTC 58.465 50.000 0.00 0.00 0.00 4.79
619 2730 1.369091 CCTTGAAAGCCATCCGTCCG 61.369 60.000 0.00 0.00 0.00 4.79
621 2732 2.125106 GAAAGCCATCCGTCCGCT 60.125 61.111 0.00 0.00 0.00 5.52
624 2735 3.976701 AAGCCATCCGTCCGCTTGG 62.977 63.158 0.00 2.80 41.18 3.61
627 2738 4.776322 CATCCGTCCGCTTGGGCA 62.776 66.667 0.00 0.00 37.12 5.36
629 2740 3.561120 ATCCGTCCGCTTGGGCAAA 62.561 57.895 0.00 0.00 37.12 3.68
630 2741 4.038080 CCGTCCGCTTGGGCAAAC 62.038 66.667 0.00 0.00 37.12 2.93
666 2780 2.768253 AACGGATGAGAATGTGCAGA 57.232 45.000 0.00 0.00 0.00 4.26
713 2827 6.748132 ACTTGCACTGCATTATAGTTTTTGT 58.252 32.000 4.10 0.00 38.76 2.83
717 2831 8.741101 TGCACTGCATTATAGTTTTTGTTTAG 57.259 30.769 0.00 0.00 31.71 1.85
722 2836 7.891561 TGCATTATAGTTTTTGTTTAGGCACT 58.108 30.769 0.00 0.00 46.37 4.40
723 2837 8.026607 TGCATTATAGTTTTTGTTTAGGCACTC 58.973 33.333 0.00 0.00 41.75 3.51
724 2838 8.244113 GCATTATAGTTTTTGTTTAGGCACTCT 58.756 33.333 0.00 0.00 41.75 3.24
728 2842 6.619801 AGTTTTTGTTTAGGCACTCTACTG 57.380 37.500 0.00 0.00 41.75 2.74
729 2843 5.008712 AGTTTTTGTTTAGGCACTCTACTGC 59.991 40.000 0.00 0.00 41.75 4.40
730 2844 4.351874 TTTGTTTAGGCACTCTACTGCT 57.648 40.909 0.00 0.00 41.75 4.24
731 2845 3.319137 TGTTTAGGCACTCTACTGCTG 57.681 47.619 0.00 0.00 41.75 4.41
732 2846 2.897326 TGTTTAGGCACTCTACTGCTGA 59.103 45.455 0.00 0.00 41.75 4.26
733 2847 3.323691 TGTTTAGGCACTCTACTGCTGAA 59.676 43.478 0.00 0.00 41.75 3.02
734 2848 3.594603 TTAGGCACTCTACTGCTGAAC 57.405 47.619 0.00 0.00 41.75 3.18
735 2849 1.638529 AGGCACTCTACTGCTGAACT 58.361 50.000 0.00 0.00 37.33 3.01
736 2850 2.808919 AGGCACTCTACTGCTGAACTA 58.191 47.619 0.00 0.00 37.33 2.24
737 2851 3.165875 AGGCACTCTACTGCTGAACTAA 58.834 45.455 0.00 0.00 37.33 2.24
756 2870 9.871238 TGAACTAATTAAGCTCTATTTCTTCGT 57.129 29.630 0.00 0.00 0.00 3.85
774 2888 2.031068 TCGTTATTGTGTGTGTGTGTGC 59.969 45.455 0.00 0.00 0.00 4.57
783 2897 3.875039 TGTGTGTGCGCACTGTGC 61.875 61.111 37.59 24.77 45.44 4.57
913 3048 1.978580 ACTCCCTCCACTTAACACCAG 59.021 52.381 0.00 0.00 0.00 4.00
914 3049 0.690762 TCCCTCCACTTAACACCAGC 59.309 55.000 0.00 0.00 0.00 4.85
915 3050 0.693049 CCCTCCACTTAACACCAGCT 59.307 55.000 0.00 0.00 0.00 4.24
916 3051 1.073923 CCCTCCACTTAACACCAGCTT 59.926 52.381 0.00 0.00 0.00 3.74
917 3052 2.304761 CCCTCCACTTAACACCAGCTTA 59.695 50.000 0.00 0.00 0.00 3.09
918 3053 3.335579 CCTCCACTTAACACCAGCTTAC 58.664 50.000 0.00 0.00 0.00 2.34
919 3054 3.335579 CTCCACTTAACACCAGCTTACC 58.664 50.000 0.00 0.00 0.00 2.85
920 3055 2.706723 TCCACTTAACACCAGCTTACCA 59.293 45.455 0.00 0.00 0.00 3.25
954 3112 2.046507 CAGTCCTCTGCACCAGCC 60.047 66.667 0.00 0.00 41.13 4.85
955 3113 2.527624 AGTCCTCTGCACCAGCCA 60.528 61.111 0.00 0.00 41.13 4.75
1413 3580 7.971183 GGTATCATACCTTCCATTTCTTCTC 57.029 40.000 6.59 0.00 45.52 2.87
1414 3581 7.740805 GGTATCATACCTTCCATTTCTTCTCT 58.259 38.462 6.59 0.00 45.52 3.10
1415 3582 7.875554 GGTATCATACCTTCCATTTCTTCTCTC 59.124 40.741 6.59 0.00 45.52 3.20
1421 3588 5.177326 CCTTCCATTTCTTCTCTCTGAGTG 58.823 45.833 4.32 2.24 0.00 3.51
1425 3599 4.934602 CCATTTCTTCTCTCTGAGTGTTCC 59.065 45.833 4.32 0.00 0.00 3.62
1434 3609 5.010516 TCTCTCTGAGTGTTCCTCTTTTCTG 59.989 44.000 4.32 0.00 41.11 3.02
1456 3631 5.226396 TGGGACGAAAATACTTGCATTTTG 58.774 37.500 0.63 0.00 38.04 2.44
1462 3646 2.566952 ATACTTGCATTTTGCCGAGC 57.433 45.000 0.00 0.00 44.23 5.03
1480 3664 2.109181 GTATCCCGGCCACTGCTC 59.891 66.667 2.24 0.00 37.74 4.26
1481 3665 2.041922 TATCCCGGCCACTGCTCT 60.042 61.111 2.24 0.00 37.74 4.09
1482 3666 2.434843 TATCCCGGCCACTGCTCTG 61.435 63.158 2.24 0.00 37.74 3.35
1485 3669 4.790962 CCGGCCACTGCTCTGCAT 62.791 66.667 2.24 0.00 38.13 3.96
1486 3670 3.200593 CGGCCACTGCTCTGCATC 61.201 66.667 2.24 0.00 38.13 3.91
1487 3671 2.045634 GGCCACTGCTCTGCATCA 60.046 61.111 0.00 0.00 38.13 3.07
1488 3672 2.113433 GGCCACTGCTCTGCATCAG 61.113 63.158 0.00 8.62 38.13 2.90
1534 3718 4.212847 GCATGCCATGTAACTATCTGAGTG 59.787 45.833 6.36 0.00 38.87 3.51
1535 3719 3.797039 TGCCATGTAACTATCTGAGTGC 58.203 45.455 0.00 0.00 38.87 4.40
1536 3720 3.197549 TGCCATGTAACTATCTGAGTGCA 59.802 43.478 0.00 0.00 38.87 4.57
1639 3823 0.108138 CAGTCTAGCTTGGTTCGGGG 60.108 60.000 0.00 0.00 0.00 5.73
1664 3848 1.259609 CTTTGGAAGCATGCCCAAGA 58.740 50.000 22.43 14.99 42.67 3.02
1665 3849 1.203994 CTTTGGAAGCATGCCCAAGAG 59.796 52.381 22.43 18.74 42.67 2.85
1667 3851 0.627451 TGGAAGCATGCCCAAGAGAT 59.373 50.000 15.66 0.00 24.52 2.75
1668 3852 1.006281 TGGAAGCATGCCCAAGAGATT 59.994 47.619 15.66 0.00 24.52 2.40
1669 3853 1.680207 GGAAGCATGCCCAAGAGATTC 59.320 52.381 15.66 8.75 0.00 2.52
1674 3868 2.035576 GCATGCCCAAGAGATTCATTCC 59.964 50.000 6.36 0.00 0.00 3.01
1688 3882 5.485353 AGATTCATTCCAGGAGTAGTTCACA 59.515 40.000 0.00 0.00 0.00 3.58
1714 3914 7.764695 AAAGTTTGTGTTTTACCAGCAATAC 57.235 32.000 0.00 0.00 0.00 1.89
1781 4029 6.128634 GCACTGTACTCCATGTTTACTTGTAC 60.129 42.308 0.00 0.00 0.00 2.90
1808 4056 6.687081 AGTTCGTAGAAATCAGACCTAGAG 57.313 41.667 0.00 0.00 45.90 2.43
1809 4057 6.416415 AGTTCGTAGAAATCAGACCTAGAGA 58.584 40.000 0.00 0.00 45.90 3.10
1882 4147 7.872163 TCTAAAATTGCAAGCATGTTTACTG 57.128 32.000 4.94 0.00 0.00 2.74
1900 4165 3.077359 ACTGGCAGCTCATACAAACTTC 58.923 45.455 15.89 0.00 0.00 3.01
1912 4180 3.320673 ACAAACTTCGGCCTAGAGAAG 57.679 47.619 14.47 14.47 46.66 2.85
1917 4247 2.691011 ACTTCGGCCTAGAGAAGATGTC 59.309 50.000 20.85 0.00 44.76 3.06
1988 4318 1.073923 GGTTAATCCCGCCATCCTGAT 59.926 52.381 0.00 0.00 0.00 2.90
1999 4329 2.357009 GCCATCCTGATGTTCACATGAC 59.643 50.000 0.00 0.00 36.57 3.06
2106 4494 7.038048 TCAGATCAGATCAGAAACATACACAC 58.962 38.462 13.14 0.00 0.00 3.82
2108 4496 7.494952 CAGATCAGATCAGAAACATACACACAT 59.505 37.037 13.14 0.00 0.00 3.21
2168 4565 0.464554 GATCTCGGAAGGCCCAAAGG 60.465 60.000 0.00 0.00 34.14 3.11
2170 4567 1.377333 CTCGGAAGGCCCAAAGGTC 60.377 63.158 0.00 0.00 38.43 3.85
2171 4568 2.361230 CGGAAGGCCCAAAGGTCC 60.361 66.667 0.00 0.00 39.27 4.46
2267 4673 0.321564 ACCTAAACCGGCCGTAAACC 60.322 55.000 26.12 0.00 0.00 3.27
2268 4674 0.321475 CCTAAACCGGCCGTAAACCA 60.321 55.000 26.12 2.67 0.00 3.67
2349 4760 1.396301 CGAAAGTCAGAGCCTCAATGC 59.604 52.381 0.00 0.00 0.00 3.56
2417 4845 1.234821 GTTCGTTTGTCCTCATGCCA 58.765 50.000 0.00 0.00 0.00 4.92
2421 4849 1.838112 GTTTGTCCTCATGCCATGGA 58.162 50.000 18.40 0.31 0.00 3.41
2422 4850 1.747355 GTTTGTCCTCATGCCATGGAG 59.253 52.381 18.40 3.14 0.00 3.86
2433 4861 3.882131 CCATGGAGATGGGTTTCGT 57.118 52.632 5.56 0.00 45.11 3.85
2434 4862 1.382522 CCATGGAGATGGGTTTCGTG 58.617 55.000 5.56 0.00 45.11 4.35
2435 4863 1.340017 CCATGGAGATGGGTTTCGTGT 60.340 52.381 5.56 0.00 45.11 4.49
2437 4865 0.762418 TGGAGATGGGTTTCGTGTGT 59.238 50.000 0.00 0.00 0.00 3.72
2438 4866 1.270625 TGGAGATGGGTTTCGTGTGTC 60.271 52.381 0.00 0.00 0.00 3.67
2439 4867 1.439679 GAGATGGGTTTCGTGTGTCC 58.560 55.000 0.00 0.00 0.00 4.02
2440 4868 1.002087 GAGATGGGTTTCGTGTGTCCT 59.998 52.381 0.00 0.00 0.00 3.85
2441 4869 1.002087 AGATGGGTTTCGTGTGTCCTC 59.998 52.381 0.00 0.00 0.00 3.71
2442 4870 1.002087 GATGGGTTTCGTGTGTCCTCT 59.998 52.381 0.00 0.00 0.00 3.69
2443 4871 0.834612 TGGGTTTCGTGTGTCCTCTT 59.165 50.000 0.00 0.00 0.00 2.85
2444 4872 1.226746 GGGTTTCGTGTGTCCTCTTG 58.773 55.000 0.00 0.00 0.00 3.02
2445 4873 0.586802 GGTTTCGTGTGTCCTCTTGC 59.413 55.000 0.00 0.00 0.00 4.01
2446 4874 1.583054 GTTTCGTGTGTCCTCTTGCT 58.417 50.000 0.00 0.00 0.00 3.91
2448 4876 1.581934 TTCGTGTGTCCTCTTGCTTG 58.418 50.000 0.00 0.00 0.00 4.01
2449 4877 0.880278 TCGTGTGTCCTCTTGCTTGC 60.880 55.000 0.00 0.00 0.00 4.01
2450 4878 1.159713 CGTGTGTCCTCTTGCTTGCA 61.160 55.000 0.00 0.00 0.00 4.08
2451 4879 1.242076 GTGTGTCCTCTTGCTTGCAT 58.758 50.000 0.00 0.00 0.00 3.96
2452 4880 1.610522 GTGTGTCCTCTTGCTTGCATT 59.389 47.619 0.00 0.00 0.00 3.56
2453 4881 2.035066 GTGTGTCCTCTTGCTTGCATTT 59.965 45.455 0.00 0.00 0.00 2.32
2454 4882 2.694628 TGTGTCCTCTTGCTTGCATTTT 59.305 40.909 0.00 0.00 0.00 1.82
2455 4883 3.054878 GTGTCCTCTTGCTTGCATTTTG 58.945 45.455 0.00 0.00 0.00 2.44
2456 4884 2.694628 TGTCCTCTTGCTTGCATTTTGT 59.305 40.909 0.00 0.00 0.00 2.83
2457 4885 3.243501 TGTCCTCTTGCTTGCATTTTGTC 60.244 43.478 0.00 0.00 0.00 3.18
2458 4886 3.005155 GTCCTCTTGCTTGCATTTTGTCT 59.995 43.478 0.00 0.00 0.00 3.41
2488 4916 0.961019 ATGGTGTTGTGTGTGGATGC 59.039 50.000 0.00 0.00 0.00 3.91
2599 5081 2.752358 CTCAGCCAGACCAAGCCA 59.248 61.111 0.00 0.00 0.00 4.75
2605 5087 0.811616 GCCAGACCAAGCCATCTACG 60.812 60.000 0.00 0.00 0.00 3.51
2619 5101 3.521560 CATCTACGTTCTGCTGGCTAAA 58.478 45.455 0.00 0.00 0.00 1.85
2635 5117 5.611374 TGGCTAAACTGGTAAGCATCTATC 58.389 41.667 9.23 0.00 38.01 2.08
2643 5125 7.151999 ACTGGTAAGCATCTATCTATTCTCG 57.848 40.000 0.00 0.00 0.00 4.04
2647 5136 4.448537 AGCATCTATCTATTCTCGCCAC 57.551 45.455 0.00 0.00 0.00 5.01
2652 5141 5.378292 TCTATCTATTCTCGCCACACATC 57.622 43.478 0.00 0.00 0.00 3.06
2653 5142 4.827284 TCTATCTATTCTCGCCACACATCA 59.173 41.667 0.00 0.00 0.00 3.07
2654 5143 3.443099 TCTATTCTCGCCACACATCAG 57.557 47.619 0.00 0.00 0.00 2.90
2665 5154 3.617288 GCCACACATCAGACATCACTGTA 60.617 47.826 0.00 0.00 38.79 2.74
2745 5246 4.620982 GCTTGTGTTAAAAATGTGAGGCT 58.379 39.130 0.00 0.00 0.00 4.58
2746 5247 4.445385 GCTTGTGTTAAAAATGTGAGGCTG 59.555 41.667 0.00 0.00 0.00 4.85
2912 5414 2.260844 AAACTTGAGCTGCACTGCTA 57.739 45.000 1.02 0.00 44.17 3.49
2913 5415 1.517242 AACTTGAGCTGCACTGCTAC 58.483 50.000 1.02 0.00 44.17 3.58
2914 5416 0.683973 ACTTGAGCTGCACTGCTACT 59.316 50.000 1.02 0.00 44.17 2.57
2915 5417 1.337635 ACTTGAGCTGCACTGCTACTC 60.338 52.381 13.82 13.82 44.17 2.59
2916 5418 0.036952 TTGAGCTGCACTGCTACTCC 60.037 55.000 16.53 0.00 44.17 3.85
2925 5427 2.801342 GCACTGCTACTCCTACATCTGC 60.801 54.545 0.00 0.00 0.00 4.26
2928 5430 3.320541 ACTGCTACTCCTACATCTGCATC 59.679 47.826 0.00 0.00 0.00 3.91
2977 5482 1.418264 GTTCCCTTGAGCCTATCCCTC 59.582 57.143 0.00 0.00 0.00 4.30
3023 5528 5.692204 CACCACTAGCAGATTTATCTTACCG 59.308 44.000 0.00 0.00 34.22 4.02
3024 5529 5.221461 ACCACTAGCAGATTTATCTTACCGG 60.221 44.000 0.00 0.00 34.22 5.28
3047 5552 2.086869 AGTGGATTTGCATTCGAGTGG 58.913 47.619 10.16 0.00 0.00 4.00
3049 5554 0.101219 GGATTTGCATTCGAGTGGGC 59.899 55.000 10.16 1.61 0.00 5.36
3060 5565 2.434884 AGTGGGCGATCTTGTGCG 60.435 61.111 0.00 0.00 0.00 5.34
3079 5587 3.111098 GCGAGCAAAGCCTTTTATGATG 58.889 45.455 0.00 0.00 0.00 3.07
3089 5597 8.814235 CAAAGCCTTTTATGATGATTGATTGAC 58.186 33.333 0.00 0.00 0.00 3.18
3214 5726 1.503818 CGGAAAACACCACCCGACTG 61.504 60.000 0.00 0.00 44.29 3.51
3215 5727 1.652563 GAAAACACCACCCGACTGC 59.347 57.895 0.00 0.00 0.00 4.40
3271 5783 2.597578 TTTCCTTGTCCCCTTTAGCC 57.402 50.000 0.00 0.00 0.00 3.93
3279 5791 0.691078 TCCCCTTTAGCCGCATCTCT 60.691 55.000 0.00 0.00 0.00 3.10
3372 5884 5.862323 ACAACGATGTAGTGCTAGTAAAGTG 59.138 40.000 0.00 0.00 38.24 3.16
3407 5919 3.183775 CGAGTCAGGTGGTTAACTTTTCG 59.816 47.826 5.42 1.47 0.00 3.46
3429 5948 3.370366 GTCTTGTCATCACTAGCTGCTTG 59.630 47.826 7.79 8.80 0.00 4.01
3434 5953 3.862267 GTCATCACTAGCTGCTTGTACTG 59.138 47.826 15.96 15.09 0.00 2.74
3451 6005 3.669251 ACTGCTAGACCTTGTCTGAAC 57.331 47.619 7.00 0.00 43.30 3.18
3456 6010 2.821991 AGACCTTGTCTGAACGAAGG 57.178 50.000 8.93 8.93 41.76 3.46
3473 6027 0.250727 AGGAATGGGAACGTGTGTGG 60.251 55.000 0.00 0.00 0.00 4.17
3474 6028 0.536460 GGAATGGGAACGTGTGTGGT 60.536 55.000 0.00 0.00 0.00 4.16
3475 6029 0.591170 GAATGGGAACGTGTGTGGTG 59.409 55.000 0.00 0.00 0.00 4.17
3476 6030 0.106918 AATGGGAACGTGTGTGGTGT 60.107 50.000 0.00 0.00 0.00 4.16
3477 6031 0.817634 ATGGGAACGTGTGTGGTGTG 60.818 55.000 0.00 0.00 0.00 3.82
3692 6248 5.803461 TCCACGACGATGTTTTTATAGAGTG 59.197 40.000 0.00 0.00 0.00 3.51
3693 6249 5.575606 CCACGACGATGTTTTTATAGAGTGT 59.424 40.000 0.00 0.00 0.00 3.55
3716 6272 1.530293 GCTGCTGAGTTTGTCTGTCTG 59.470 52.381 0.00 0.00 0.00 3.51
3740 6298 1.740380 CGTTCCTGCGTGATCCTCATT 60.740 52.381 0.00 0.00 0.00 2.57
3764 6327 4.913335 TTACTCCCGTACATCTGTCATC 57.087 45.455 0.00 0.00 0.00 2.92
3770 6333 2.166459 CCGTACATCTGTCATCCTGTGT 59.834 50.000 0.00 0.00 0.00 3.72
3772 6335 3.859961 CGTACATCTGTCATCCTGTGTTC 59.140 47.826 0.00 0.00 0.00 3.18
3885 6457 3.467226 GCATGCTGCTGCCCCATT 61.467 61.111 11.37 0.00 40.96 3.16
3889 6461 2.993264 GCTGCTGCCCCATTGTGT 60.993 61.111 3.85 0.00 0.00 3.72
3890 6462 2.576832 GCTGCTGCCCCATTGTGTT 61.577 57.895 3.85 0.00 0.00 3.32
3891 6463 1.290955 CTGCTGCCCCATTGTGTTG 59.709 57.895 0.00 0.00 0.00 3.33
3892 6464 1.457267 TGCTGCCCCATTGTGTTGT 60.457 52.632 0.00 0.00 0.00 3.32
3893 6465 0.178978 TGCTGCCCCATTGTGTTGTA 60.179 50.000 0.00 0.00 0.00 2.41
3960 6535 1.081175 GCCTTGCCGTCTTTTCAGC 60.081 57.895 0.00 0.00 0.00 4.26
4082 6662 1.875514 GATGCTGTTGTTGAGTGCTCA 59.124 47.619 0.00 0.00 37.91 4.26
4096 6676 1.139095 GCTCATTGCTTGCTCAGGC 59.861 57.895 0.00 0.00 38.95 4.85
4107 6687 1.246056 TGCTCAGGCATGTTTGAGGC 61.246 55.000 22.00 16.61 44.28 4.70
4112 6692 1.614903 CAGGCATGTTTGAGGCTTTCA 59.385 47.619 0.00 0.00 38.75 2.69
4184 6786 3.508762 TGGAGATCTAAAACGAACGAGC 58.491 45.455 0.00 0.00 0.00 5.03
4269 6871 0.698818 CAAGTTTAGGAGCAGGGGGT 59.301 55.000 0.00 0.00 0.00 4.95
4342 6947 1.001641 GGCTGTTGTCTGCAGGGAT 60.002 57.895 15.13 0.00 39.69 3.85
4363 6968 3.652057 TCCTTCACTGAATCCAATCCC 57.348 47.619 0.00 0.00 0.00 3.85
4364 6969 2.918934 TCCTTCACTGAATCCAATCCCA 59.081 45.455 0.00 0.00 0.00 4.37
4365 6970 3.054139 TCCTTCACTGAATCCAATCCCAG 60.054 47.826 0.00 0.00 0.00 4.45
4409 7027 3.782443 GGCAGGAACCCCGATCGT 61.782 66.667 15.09 0.00 37.58 3.73
4411 7029 2.104331 CAGGAACCCCGATCGTCG 59.896 66.667 15.09 5.73 40.07 5.12
4413 7031 3.834799 GGAACCCCGATCGTCGCT 61.835 66.667 15.09 0.00 38.82 4.93
4456 7074 5.413523 TGAAAAACCTAACCGAAATCTAGGC 59.586 40.000 0.00 0.00 36.44 3.93
4457 7075 4.563140 AAACCTAACCGAAATCTAGGCA 57.437 40.909 0.00 0.00 36.44 4.75
4458 7076 4.772886 AACCTAACCGAAATCTAGGCAT 57.227 40.909 0.00 0.00 36.44 4.40
4459 7077 4.073293 ACCTAACCGAAATCTAGGCATG 57.927 45.455 0.00 0.00 36.44 4.06
4460 7078 3.454812 ACCTAACCGAAATCTAGGCATGT 59.545 43.478 0.00 0.00 36.44 3.21
4461 7079 3.809832 CCTAACCGAAATCTAGGCATGTG 59.190 47.826 0.00 0.00 0.00 3.21
4462 7080 3.627395 AACCGAAATCTAGGCATGTGA 57.373 42.857 0.00 0.00 0.00 3.58
4463 7081 3.185246 ACCGAAATCTAGGCATGTGAG 57.815 47.619 0.00 0.00 0.00 3.51
4464 7082 1.869767 CCGAAATCTAGGCATGTGAGC 59.130 52.381 0.00 0.00 0.00 4.26
4465 7083 1.524355 CGAAATCTAGGCATGTGAGCG 59.476 52.381 0.00 0.00 34.64 5.03
4466 7084 1.262683 GAAATCTAGGCATGTGAGCGC 59.737 52.381 0.00 0.00 34.64 5.92
4483 7101 4.419921 CCCCGGCTACAACACCCC 62.420 72.222 0.00 0.00 0.00 4.95
4484 7102 4.419921 CCCGGCTACAACACCCCC 62.420 72.222 0.00 0.00 0.00 5.40
4485 7103 3.642503 CCGGCTACAACACCCCCA 61.643 66.667 0.00 0.00 0.00 4.96
4486 7104 2.359478 CGGCTACAACACCCCCAC 60.359 66.667 0.00 0.00 0.00 4.61
4487 7105 2.890766 CGGCTACAACACCCCCACT 61.891 63.158 0.00 0.00 0.00 4.00
4488 7106 1.002502 GGCTACAACACCCCCACTC 60.003 63.158 0.00 0.00 0.00 3.51
4489 7107 1.375523 GCTACAACACCCCCACTCG 60.376 63.158 0.00 0.00 0.00 4.18
4490 7108 1.375523 CTACAACACCCCCACTCGC 60.376 63.158 0.00 0.00 0.00 5.03
4491 7109 2.107041 CTACAACACCCCCACTCGCA 62.107 60.000 0.00 0.00 0.00 5.10
4492 7110 2.107041 TACAACACCCCCACTCGCAG 62.107 60.000 0.00 0.00 0.00 5.18
4493 7111 3.953775 AACACCCCCACTCGCAGG 61.954 66.667 0.00 0.00 0.00 4.85
4494 7112 4.954118 ACACCCCCACTCGCAGGA 62.954 66.667 0.00 0.00 0.00 3.86
4495 7113 3.636231 CACCCCCACTCGCAGGAA 61.636 66.667 0.00 0.00 0.00 3.36
4496 7114 3.322466 ACCCCCACTCGCAGGAAG 61.322 66.667 0.00 0.00 0.00 3.46
4497 7115 4.101448 CCCCCACTCGCAGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
4498 7116 3.003173 CCCCACTCGCAGGAAGGA 61.003 66.667 0.00 0.00 0.00 3.36
4499 7117 2.266055 CCCACTCGCAGGAAGGAC 59.734 66.667 0.00 0.00 0.00 3.85
4500 7118 2.266055 CCACTCGCAGGAAGGACC 59.734 66.667 0.00 0.00 39.35 4.46
4501 7119 2.583441 CCACTCGCAGGAAGGACCA 61.583 63.158 0.00 0.00 42.04 4.02
4502 7120 1.371183 CACTCGCAGGAAGGACCAA 59.629 57.895 0.00 0.00 42.04 3.67
4503 7121 0.671781 CACTCGCAGGAAGGACCAAG 60.672 60.000 0.00 0.00 42.04 3.61
4504 7122 1.743252 CTCGCAGGAAGGACCAAGC 60.743 63.158 0.00 0.00 42.04 4.01
4505 7123 2.747855 CGCAGGAAGGACCAAGCC 60.748 66.667 0.00 0.00 42.04 4.35
4506 7124 2.361737 GCAGGAAGGACCAAGCCC 60.362 66.667 0.00 0.00 42.04 5.19
4507 7125 3.170362 CAGGAAGGACCAAGCCCA 58.830 61.111 0.00 0.00 42.04 5.36
4508 7126 1.693640 CAGGAAGGACCAAGCCCAT 59.306 57.895 0.00 0.00 42.04 4.00
4509 7127 0.394899 CAGGAAGGACCAAGCCCATC 60.395 60.000 0.00 0.00 42.04 3.51
4510 7128 1.452108 GGAAGGACCAAGCCCATCG 60.452 63.158 0.00 0.00 38.79 3.84
4511 7129 1.602237 GAAGGACCAAGCCCATCGA 59.398 57.895 0.00 0.00 0.00 3.59
4512 7130 0.462759 GAAGGACCAAGCCCATCGAG 60.463 60.000 0.00 0.00 0.00 4.04
4513 7131 2.514824 GGACCAAGCCCATCGAGC 60.515 66.667 0.00 0.00 0.00 5.03
4514 7132 2.514824 GACCAAGCCCATCGAGCC 60.515 66.667 0.00 0.00 0.00 4.70
4515 7133 3.329542 GACCAAGCCCATCGAGCCA 62.330 63.158 0.00 0.00 0.00 4.75
4516 7134 2.825836 CCAAGCCCATCGAGCCAC 60.826 66.667 0.00 0.00 0.00 5.01
4517 7135 3.197790 CAAGCCCATCGAGCCACG 61.198 66.667 0.00 0.00 44.09 4.94
4525 7143 3.228017 TCGAGCCACGACCCAACA 61.228 61.111 0.00 0.00 46.45 3.33
4526 7144 2.738521 CGAGCCACGACCCAACAG 60.739 66.667 0.00 0.00 45.77 3.16
4527 7145 2.741092 GAGCCACGACCCAACAGA 59.259 61.111 0.00 0.00 0.00 3.41
4528 7146 1.374758 GAGCCACGACCCAACAGAG 60.375 63.158 0.00 0.00 0.00 3.35
4529 7147 3.050275 GCCACGACCCAACAGAGC 61.050 66.667 0.00 0.00 0.00 4.09
4530 7148 2.358737 CCACGACCCAACAGAGCC 60.359 66.667 0.00 0.00 0.00 4.70
4531 7149 2.358737 CACGACCCAACAGAGCCC 60.359 66.667 0.00 0.00 0.00 5.19
4532 7150 4.003788 ACGACCCAACAGAGCCCG 62.004 66.667 0.00 0.00 0.00 6.13
4534 7152 4.329545 GACCCAACAGAGCCCGCA 62.330 66.667 0.00 0.00 0.00 5.69
4535 7153 4.335647 ACCCAACAGAGCCCGCAG 62.336 66.667 0.00 0.00 0.00 5.18
4551 7169 3.702048 AGGCCGAACCAGCGCTTA 61.702 61.111 7.50 0.00 43.14 3.09
4552 7170 2.513897 GGCCGAACCAGCGCTTAT 60.514 61.111 7.50 0.00 38.86 1.73
4553 7171 2.709475 GCCGAACCAGCGCTTATG 59.291 61.111 7.50 1.11 0.00 1.90
4554 7172 2.106683 GCCGAACCAGCGCTTATGT 61.107 57.895 7.50 1.90 0.00 2.29
4555 7173 1.715585 CCGAACCAGCGCTTATGTG 59.284 57.895 7.50 0.00 0.00 3.21
4556 7174 1.705337 CCGAACCAGCGCTTATGTGG 61.705 60.000 7.50 9.57 37.38 4.17
4557 7175 1.429423 GAACCAGCGCTTATGTGGC 59.571 57.895 7.50 0.00 34.40 5.01
4558 7176 1.993369 GAACCAGCGCTTATGTGGCC 61.993 60.000 7.50 0.00 34.40 5.36
4559 7177 3.211963 CCAGCGCTTATGTGGCCC 61.212 66.667 7.50 0.00 0.00 5.80
4560 7178 3.576356 CAGCGCTTATGTGGCCCG 61.576 66.667 7.50 0.00 0.00 6.13
4561 7179 4.856801 AGCGCTTATGTGGCCCGG 62.857 66.667 2.64 0.00 0.00 5.73
4562 7180 4.849310 GCGCTTATGTGGCCCGGA 62.849 66.667 0.73 0.00 0.00 5.14
4563 7181 2.588877 CGCTTATGTGGCCCGGAG 60.589 66.667 0.73 0.00 0.00 4.63
4564 7182 2.590092 GCTTATGTGGCCCGGAGT 59.410 61.111 0.73 0.00 0.00 3.85
4565 7183 1.819632 GCTTATGTGGCCCGGAGTG 60.820 63.158 0.73 0.00 0.00 3.51
4566 7184 1.153168 CTTATGTGGCCCGGAGTGG 60.153 63.158 0.73 0.00 37.55 4.00
4583 7201 2.046604 GGTGACGGCCCAACCTAC 60.047 66.667 8.56 0.00 35.61 3.18
4584 7202 2.046604 GTGACGGCCCAACCTACC 60.047 66.667 0.00 0.00 35.61 3.18
4585 7203 2.203877 TGACGGCCCAACCTACCT 60.204 61.111 0.00 0.00 35.61 3.08
4586 7204 2.288025 TGACGGCCCAACCTACCTC 61.288 63.158 0.00 0.00 35.61 3.85
4587 7205 1.988406 GACGGCCCAACCTACCTCT 60.988 63.158 0.00 0.00 35.61 3.69
4588 7206 0.685458 GACGGCCCAACCTACCTCTA 60.685 60.000 0.00 0.00 35.61 2.43
4589 7207 0.974525 ACGGCCCAACCTACCTCTAC 60.975 60.000 0.00 0.00 35.61 2.59
4590 7208 0.686769 CGGCCCAACCTACCTCTACT 60.687 60.000 0.00 0.00 35.61 2.57
4591 7209 1.581223 GGCCCAACCTACCTCTACTT 58.419 55.000 0.00 0.00 34.51 2.24
4592 7210 2.755686 GGCCCAACCTACCTCTACTTA 58.244 52.381 0.00 0.00 34.51 2.24
4593 7211 3.109928 GGCCCAACCTACCTCTACTTAA 58.890 50.000 0.00 0.00 34.51 1.85
4594 7212 3.134262 GGCCCAACCTACCTCTACTTAAG 59.866 52.174 0.00 0.00 34.51 1.85
4595 7213 3.431905 GCCCAACCTACCTCTACTTAAGC 60.432 52.174 1.29 0.00 0.00 3.09
4596 7214 3.181478 CCCAACCTACCTCTACTTAAGCG 60.181 52.174 1.29 0.00 0.00 4.68
4597 7215 3.446516 CCAACCTACCTCTACTTAAGCGT 59.553 47.826 1.29 0.00 0.00 5.07
4598 7216 4.421948 CAACCTACCTCTACTTAAGCGTG 58.578 47.826 1.29 0.00 0.00 5.34
4599 7217 3.022406 ACCTACCTCTACTTAAGCGTGG 58.978 50.000 1.29 7.10 0.00 4.94
4600 7218 2.223758 CCTACCTCTACTTAAGCGTGGC 60.224 54.545 1.29 0.00 0.00 5.01
4601 7219 1.263356 ACCTCTACTTAAGCGTGGCA 58.737 50.000 1.29 0.00 0.00 4.92
4602 7220 1.067071 ACCTCTACTTAAGCGTGGCAC 60.067 52.381 7.79 7.79 0.00 5.01
4603 7221 1.204941 CCTCTACTTAAGCGTGGCACT 59.795 52.381 16.72 0.00 0.00 4.40
4604 7222 2.353803 CCTCTACTTAAGCGTGGCACTT 60.354 50.000 16.72 6.71 0.00 3.16
4605 7223 2.924290 CTCTACTTAAGCGTGGCACTTC 59.076 50.000 16.72 7.34 0.00 3.01
4606 7224 2.297880 TCTACTTAAGCGTGGCACTTCA 59.702 45.455 16.72 0.00 0.00 3.02
4607 7225 1.961793 ACTTAAGCGTGGCACTTCAA 58.038 45.000 16.72 3.61 0.00 2.69
4608 7226 1.602377 ACTTAAGCGTGGCACTTCAAC 59.398 47.619 16.72 0.00 0.00 3.18
4609 7227 0.948678 TTAAGCGTGGCACTTCAACC 59.051 50.000 16.72 0.00 0.00 3.77
4610 7228 0.887387 TAAGCGTGGCACTTCAACCC 60.887 55.000 16.72 0.00 0.00 4.11
4611 7229 2.594592 GCGTGGCACTTCAACCCT 60.595 61.111 16.72 0.00 0.00 4.34
4612 7230 1.302192 GCGTGGCACTTCAACCCTA 60.302 57.895 16.72 0.00 0.00 3.53
4613 7231 1.298859 GCGTGGCACTTCAACCCTAG 61.299 60.000 16.72 0.00 0.00 3.02
4614 7232 0.320374 CGTGGCACTTCAACCCTAGA 59.680 55.000 16.72 0.00 0.00 2.43
4615 7233 1.673033 CGTGGCACTTCAACCCTAGAG 60.673 57.143 16.72 0.00 0.00 2.43
4616 7234 1.623811 GTGGCACTTCAACCCTAGAGA 59.376 52.381 11.13 0.00 0.00 3.10
4617 7235 1.623811 TGGCACTTCAACCCTAGAGAC 59.376 52.381 0.00 0.00 0.00 3.36
4618 7236 1.903183 GGCACTTCAACCCTAGAGACT 59.097 52.381 0.00 0.00 0.00 3.24
4619 7237 3.097614 GGCACTTCAACCCTAGAGACTA 58.902 50.000 0.00 0.00 0.00 2.59
4620 7238 3.707102 GGCACTTCAACCCTAGAGACTAT 59.293 47.826 0.00 0.00 0.00 2.12
4621 7239 4.202172 GGCACTTCAACCCTAGAGACTATC 60.202 50.000 0.00 0.00 0.00 2.08
4622 7240 4.202172 GCACTTCAACCCTAGAGACTATCC 60.202 50.000 0.00 0.00 0.00 2.59
4623 7241 4.956700 CACTTCAACCCTAGAGACTATCCA 59.043 45.833 0.00 0.00 0.00 3.41
4624 7242 5.068460 CACTTCAACCCTAGAGACTATCCAG 59.932 48.000 0.00 0.00 0.00 3.86
4625 7243 5.044030 ACTTCAACCCTAGAGACTATCCAGA 60.044 44.000 0.00 0.00 0.00 3.86
4626 7244 5.055265 TCAACCCTAGAGACTATCCAGAG 57.945 47.826 0.00 0.00 0.00 3.35
4627 7245 4.141135 TCAACCCTAGAGACTATCCAGAGG 60.141 50.000 0.00 0.00 0.00 3.69
4628 7246 3.682455 ACCCTAGAGACTATCCAGAGGA 58.318 50.000 0.00 0.00 35.55 3.71
4629 7247 4.256231 ACCCTAGAGACTATCCAGAGGAT 58.744 47.826 3.74 3.74 45.40 3.24
4630 7248 4.291249 ACCCTAGAGACTATCCAGAGGATC 59.709 50.000 1.05 0.00 42.11 3.36
4631 7249 4.290985 CCCTAGAGACTATCCAGAGGATCA 59.709 50.000 1.05 0.00 42.11 2.92
4632 7250 5.253330 CCTAGAGACTATCCAGAGGATCAC 58.747 50.000 1.05 0.00 42.11 3.06
4633 7251 3.750371 AGAGACTATCCAGAGGATCACG 58.250 50.000 1.05 0.00 42.11 4.35
4634 7252 2.817258 GAGACTATCCAGAGGATCACGG 59.183 54.545 1.05 0.00 42.11 4.94
4635 7253 1.271102 GACTATCCAGAGGATCACGGC 59.729 57.143 1.05 0.00 42.11 5.68
4636 7254 0.242286 CTATCCAGAGGATCACGGCG 59.758 60.000 4.80 4.80 42.11 6.46
4637 7255 1.179174 TATCCAGAGGATCACGGCGG 61.179 60.000 13.24 0.00 42.11 6.13
4638 7256 4.899239 CCAGAGGATCACGGCGGC 62.899 72.222 13.24 0.00 37.82 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 3.220658 CATGCGCATGGCCCATCA 61.221 61.111 37.09 0.04 42.61 3.07
59 60 1.626654 CGTGTTGGGTCGAGACATGC 61.627 60.000 5.55 0.00 0.00 4.06
66 67 0.516877 CTACGTACGTGTTGGGTCGA 59.483 55.000 30.25 6.36 0.00 4.20
82 83 0.042621 GCGACGGAGCGTAGTACTAC 60.043 60.000 21.06 21.06 41.37 2.73
83 84 1.154205 GGCGACGGAGCGTAGTACTA 61.154 60.000 0.00 0.00 41.37 1.82
84 85 2.467826 GGCGACGGAGCGTAGTACT 61.468 63.158 0.00 0.00 41.37 2.73
85 86 2.023882 GGCGACGGAGCGTAGTAC 59.976 66.667 0.00 0.00 41.37 2.73
86 87 3.204827 GGGCGACGGAGCGTAGTA 61.205 66.667 0.00 0.00 41.37 1.82
88 89 3.900892 ATGGGCGACGGAGCGTAG 61.901 66.667 0.00 0.00 41.37 3.51
89 90 4.201679 CATGGGCGACGGAGCGTA 62.202 66.667 0.00 0.00 41.37 4.42
109 113 2.027625 GAGAGCGGTGTTGAACGGG 61.028 63.158 0.00 0.00 0.00 5.28
167 171 1.364626 CCTCACACGATTCTGGCTGC 61.365 60.000 0.00 0.00 0.00 5.25
202 229 4.305554 GCTAGCTAGCGACGAACC 57.694 61.111 28.89 2.48 39.82 3.62
254 285 8.598202 TCTAGTTAATCAATACACTACACCCA 57.402 34.615 0.00 0.00 0.00 4.51
256 287 7.652507 GGCTCTAGTTAATCAATACACTACACC 59.347 40.741 0.00 0.00 0.00 4.16
259 290 6.362820 GCGGCTCTAGTTAATCAATACACTAC 59.637 42.308 0.00 0.00 0.00 2.73
260 291 6.444633 GCGGCTCTAGTTAATCAATACACTA 58.555 40.000 0.00 0.00 0.00 2.74
261 292 5.290386 GCGGCTCTAGTTAATCAATACACT 58.710 41.667 0.00 0.00 0.00 3.55
262 293 4.148348 CGCGGCTCTAGTTAATCAATACAC 59.852 45.833 0.00 0.00 0.00 2.90
263 294 4.295870 CGCGGCTCTAGTTAATCAATACA 58.704 43.478 0.00 0.00 0.00 2.29
264 295 3.121445 GCGCGGCTCTAGTTAATCAATAC 59.879 47.826 8.83 0.00 0.00 1.89
265 296 3.005472 AGCGCGGCTCTAGTTAATCAATA 59.995 43.478 8.83 0.00 30.62 1.90
266 297 2.135933 GCGCGGCTCTAGTTAATCAAT 58.864 47.619 8.83 0.00 0.00 2.57
267 298 1.136305 AGCGCGGCTCTAGTTAATCAA 59.864 47.619 8.83 0.00 30.62 2.57
268 299 0.744874 AGCGCGGCTCTAGTTAATCA 59.255 50.000 8.83 0.00 30.62 2.57
269 300 1.132588 CAGCGCGGCTCTAGTTAATC 58.867 55.000 8.83 0.00 36.40 1.75
272 303 1.310216 TGTCAGCGCGGCTCTAGTTA 61.310 55.000 8.83 0.00 36.40 2.24
290 321 6.971184 GGAATAAACATTGCTTGATCTCACTG 59.029 38.462 0.00 0.00 0.00 3.66
300 331 6.660949 AGTGAAGCTAGGAATAAACATTGCTT 59.339 34.615 0.00 0.00 42.59 3.91
349 396 1.339727 GCTAACAACCCACCCACCTAG 60.340 57.143 0.00 0.00 0.00 3.02
353 400 4.090723 GGCTAACAACCCACCCAC 57.909 61.111 0.00 0.00 0.00 4.61
361 412 0.040425 CTTGCACACGGGCTAACAAC 60.040 55.000 0.00 0.00 34.04 3.32
362 413 0.179043 TCTTGCACACGGGCTAACAA 60.179 50.000 0.00 0.00 34.04 2.83
363 414 0.179043 TTCTTGCACACGGGCTAACA 60.179 50.000 0.00 0.00 34.04 2.41
370 421 2.350772 GGATCTTGTTTCTTGCACACGG 60.351 50.000 0.00 0.00 0.00 4.94
375 426 2.886523 CCAGTGGATCTTGTTTCTTGCA 59.113 45.455 1.68 0.00 0.00 4.08
376 427 2.887152 ACCAGTGGATCTTGTTTCTTGC 59.113 45.455 18.40 0.00 0.00 4.01
377 428 4.154918 GCTACCAGTGGATCTTGTTTCTTG 59.845 45.833 18.40 0.00 0.00 3.02
416 467 8.038944 GCATAGCATCCATTAATTCCAAATGAT 58.961 33.333 1.70 0.00 36.61 2.45
417 468 7.015389 TGCATAGCATCCATTAATTCCAAATGA 59.985 33.333 1.70 0.00 33.39 2.57
440 491 4.321974 CGCTACTCCCATACTTATCATGCA 60.322 45.833 0.00 0.00 0.00 3.96
441 492 4.177026 CGCTACTCCCATACTTATCATGC 58.823 47.826 0.00 0.00 0.00 4.06
489 2596 1.464608 CAATACGGCATTAGGGCATCG 59.535 52.381 0.00 0.00 43.60 3.84
490 2597 2.484264 GTCAATACGGCATTAGGGCATC 59.516 50.000 0.00 0.00 43.60 3.91
491 2598 2.504367 GTCAATACGGCATTAGGGCAT 58.496 47.619 0.00 0.00 43.60 4.40
492 2599 1.476110 GGTCAATACGGCATTAGGGCA 60.476 52.381 0.00 0.00 43.60 5.36
493 2600 1.235724 GGTCAATACGGCATTAGGGC 58.764 55.000 0.00 0.00 39.06 5.19
494 2601 2.631160 TGGTCAATACGGCATTAGGG 57.369 50.000 0.00 0.00 0.00 3.53
495 2602 3.502211 GGATTGGTCAATACGGCATTAGG 59.498 47.826 0.00 0.00 0.00 2.69
496 2603 4.133820 TGGATTGGTCAATACGGCATTAG 58.866 43.478 1.95 0.00 34.33 1.73
497 2604 4.157849 TGGATTGGTCAATACGGCATTA 57.842 40.909 1.95 0.00 34.33 1.90
498 2605 3.011566 TGGATTGGTCAATACGGCATT 57.988 42.857 1.95 0.00 34.33 3.56
518 2625 0.255033 GGTTAGCTCCAAACCGGGAT 59.745 55.000 6.32 0.00 37.26 3.85
587 2698 0.827507 TTCAAGGTTTCAGCCAGGGC 60.828 55.000 0.97 0.97 42.33 5.19
598 2709 1.534729 GACGGATGGCTTTCAAGGTT 58.465 50.000 0.00 0.00 0.00 3.50
602 2713 2.038269 GCGGACGGATGGCTTTCAA 61.038 57.895 0.00 0.00 0.00 2.69
617 2728 2.695759 TATGCGTTTGCCCAAGCGG 61.696 57.895 16.73 2.09 43.62 5.52
619 2730 1.514014 CGTATGCGTTTGCCCAAGC 60.514 57.895 0.00 0.00 41.78 4.01
621 2732 2.563942 GCGTATGCGTTTGCCCAA 59.436 55.556 4.81 0.00 41.78 4.12
706 2820 5.008712 AGCAGTAGAGTGCCTAAACAAAAAC 59.991 40.000 5.72 0.00 45.20 2.43
708 2822 4.515191 CAGCAGTAGAGTGCCTAAACAAAA 59.485 41.667 5.72 0.00 45.20 2.44
710 2824 3.323691 TCAGCAGTAGAGTGCCTAAACAA 59.676 43.478 5.72 0.00 45.20 2.83
713 2827 3.578716 AGTTCAGCAGTAGAGTGCCTAAA 59.421 43.478 5.72 0.00 45.20 1.85
717 2831 3.594603 TTAGTTCAGCAGTAGAGTGCC 57.405 47.619 5.72 0.00 45.20 5.01
722 2836 7.411486 AGAGCTTAATTAGTTCAGCAGTAGA 57.589 36.000 6.88 0.00 37.10 2.59
723 2837 9.757227 AATAGAGCTTAATTAGTTCAGCAGTAG 57.243 33.333 6.88 0.00 37.10 2.57
725 2839 9.103861 GAAATAGAGCTTAATTAGTTCAGCAGT 57.896 33.333 6.88 0.00 37.10 4.40
726 2840 9.323985 AGAAATAGAGCTTAATTAGTTCAGCAG 57.676 33.333 6.88 0.00 37.10 4.24
727 2841 9.672673 AAGAAATAGAGCTTAATTAGTTCAGCA 57.327 29.630 6.88 0.00 37.10 4.41
730 2844 9.871238 ACGAAGAAATAGAGCTTAATTAGTTCA 57.129 29.630 0.00 0.00 36.63 3.18
755 2869 2.371432 CGCACACACACACACAATAAC 58.629 47.619 0.00 0.00 0.00 1.89
756 2870 1.268285 GCGCACACACACACACAATAA 60.268 47.619 0.30 0.00 0.00 1.40
758 2872 1.063972 GCGCACACACACACACAAT 59.936 52.632 0.30 0.00 0.00 2.71
761 2875 2.277247 GTGCGCACACACACACAC 60.277 61.111 34.52 3.30 46.61 3.82
778 2892 1.947013 CTCCACTTGCACTGCACAG 59.053 57.895 2.26 7.35 38.71 3.66
779 2893 2.188829 GCTCCACTTGCACTGCACA 61.189 57.895 2.26 0.00 38.71 4.57
780 2894 2.641559 GCTCCACTTGCACTGCAC 59.358 61.111 2.26 0.00 38.71 4.57
781 2895 2.974148 CGCTCCACTTGCACTGCA 60.974 61.111 0.00 0.00 36.47 4.41
782 2896 4.395583 GCGCTCCACTTGCACTGC 62.396 66.667 0.00 0.00 0.00 4.40
783 2897 4.081030 CGCGCTCCACTTGCACTG 62.081 66.667 5.56 0.00 0.00 3.66
872 2999 1.511305 CACGGCCGGAGCGATATAT 59.489 57.895 31.76 0.00 41.24 0.86
913 3048 1.834263 AGGAGTGGAGTGATGGTAAGC 59.166 52.381 0.00 0.00 0.00 3.09
914 3049 2.419297 GCAGGAGTGGAGTGATGGTAAG 60.419 54.545 0.00 0.00 0.00 2.34
915 3050 1.555075 GCAGGAGTGGAGTGATGGTAA 59.445 52.381 0.00 0.00 0.00 2.85
916 3051 1.195115 GCAGGAGTGGAGTGATGGTA 58.805 55.000 0.00 0.00 0.00 3.25
917 3052 0.837691 TGCAGGAGTGGAGTGATGGT 60.838 55.000 0.00 0.00 0.00 3.55
918 3053 0.392193 GTGCAGGAGTGGAGTGATGG 60.392 60.000 0.00 0.00 0.00 3.51
919 3054 0.322648 TGTGCAGGAGTGGAGTGATG 59.677 55.000 0.00 0.00 0.00 3.07
920 3055 0.612229 CTGTGCAGGAGTGGAGTGAT 59.388 55.000 0.00 0.00 0.00 3.06
1191 3355 3.470888 ATCACCCGCTTCCTCCCG 61.471 66.667 0.00 0.00 0.00 5.14
1399 3566 5.792741 ACACTCAGAGAGAAGAAATGGAAG 58.207 41.667 3.79 0.00 33.32 3.46
1401 3568 5.279708 GGAACACTCAGAGAGAAGAAATGGA 60.280 44.000 3.79 0.00 33.32 3.41
1402 3569 4.934602 GGAACACTCAGAGAGAAGAAATGG 59.065 45.833 3.79 0.00 33.32 3.16
1403 3570 5.792741 AGGAACACTCAGAGAGAAGAAATG 58.207 41.667 3.79 0.00 33.32 2.32
1404 3571 6.036577 GAGGAACACTCAGAGAGAAGAAAT 57.963 41.667 3.79 0.00 45.85 2.17
1405 3572 5.461032 GAGGAACACTCAGAGAGAAGAAA 57.539 43.478 3.79 0.00 45.85 2.52
1421 3588 2.833631 TCGTCCCAGAAAAGAGGAAC 57.166 50.000 0.00 0.00 0.00 3.62
1434 3609 4.091365 GCAAAATGCAAGTATTTTCGTCCC 59.909 41.667 5.99 0.00 44.26 4.46
1462 3646 3.792053 GAGCAGTGGCCGGGATACG 62.792 68.421 2.18 0.00 42.56 3.06
1482 3666 3.818787 CCGTTGGCTGCCTGATGC 61.819 66.667 21.03 4.53 41.77 3.91
1484 3668 1.377725 CTTCCGTTGGCTGCCTGAT 60.378 57.895 21.03 0.00 0.00 2.90
1485 3669 2.032528 CTTCCGTTGGCTGCCTGA 59.967 61.111 21.03 8.35 0.00 3.86
1486 3670 1.898574 AACTTCCGTTGGCTGCCTG 60.899 57.895 21.03 9.57 30.67 4.85
1487 3671 1.898574 CAACTTCCGTTGGCTGCCT 60.899 57.895 21.03 0.00 45.28 4.75
1488 3672 2.644992 CAACTTCCGTTGGCTGCC 59.355 61.111 12.87 12.87 45.28 4.85
1504 3688 3.619419 AGTTACATGGCATGCATGTACA 58.381 40.909 27.73 24.33 42.91 2.90
1534 3718 1.691215 GCTCGAAGTAGTGCTGCTGC 61.691 60.000 8.89 8.89 40.20 5.25
1535 3719 0.108898 AGCTCGAAGTAGTGCTGCTG 60.109 55.000 0.00 0.00 39.20 4.41
1536 3720 1.403679 CTAGCTCGAAGTAGTGCTGCT 59.596 52.381 0.00 0.44 40.60 4.24
1546 3730 3.452474 AGCACAATTAGCTAGCTCGAAG 58.548 45.455 23.26 12.73 41.32 3.79
1586 3770 2.488153 ACAAGCTCCTTAAAATGGCGAC 59.512 45.455 0.00 0.00 0.00 5.19
1659 3843 4.500499 ACTCCTGGAATGAATCTCTTGG 57.500 45.455 0.00 0.00 0.00 3.61
1661 3845 6.441924 TGAACTACTCCTGGAATGAATCTCTT 59.558 38.462 0.00 0.00 0.00 2.85
1662 3846 5.960811 TGAACTACTCCTGGAATGAATCTCT 59.039 40.000 0.00 0.00 0.00 3.10
1664 3848 5.485353 TGTGAACTACTCCTGGAATGAATCT 59.515 40.000 0.00 0.00 0.00 2.40
1665 3849 5.734720 TGTGAACTACTCCTGGAATGAATC 58.265 41.667 0.00 0.00 0.00 2.52
1667 3851 5.560722 TTGTGAACTACTCCTGGAATGAA 57.439 39.130 0.00 0.00 0.00 2.57
1668 3852 5.560722 TTTGTGAACTACTCCTGGAATGA 57.439 39.130 0.00 0.00 0.00 2.57
1669 3853 6.263168 ACTTTTTGTGAACTACTCCTGGAATG 59.737 38.462 0.00 0.00 0.00 2.67
1674 3868 6.852664 ACAAACTTTTTGTGAACTACTCCTG 58.147 36.000 3.51 0.00 0.00 3.86
1688 3882 7.680442 ATTGCTGGTAAAACACAAACTTTTT 57.320 28.000 0.00 0.00 0.00 1.94
1708 3908 4.630069 ACTCCGAAGTACATGTTGTATTGC 59.370 41.667 2.30 0.00 35.05 3.56
1714 3914 5.862924 AATGAACTCCGAAGTACATGTTG 57.137 39.130 2.30 0.00 33.48 3.33
1781 4029 6.197364 AGGTCTGATTTCTACGAACTACTG 57.803 41.667 0.00 0.00 0.00 2.74
1882 4147 1.398390 CCGAAGTTTGTATGAGCTGCC 59.602 52.381 0.00 0.00 0.00 4.85
1900 4165 1.403814 TGGACATCTTCTCTAGGCCG 58.596 55.000 0.00 0.00 0.00 6.13
1912 4180 2.098117 GGCAACACTATGCTTGGACATC 59.902 50.000 0.00 0.00 45.68 3.06
1917 4247 1.137404 GCGGCAACACTATGCTTGG 59.863 57.895 0.00 0.00 45.68 3.61
1988 4318 1.546029 CTCTCCCTCGTCATGTGAACA 59.454 52.381 0.00 0.00 0.00 3.18
1999 4329 0.814457 CTGAAGGTGTCTCTCCCTCG 59.186 60.000 0.00 0.00 0.00 4.63
2106 4494 2.100749 GGGCGGTGATTCCCTTTTTATG 59.899 50.000 0.00 0.00 39.46 1.90
2108 4496 1.075698 TGGGCGGTGATTCCCTTTTTA 59.924 47.619 0.00 0.00 43.04 1.52
2157 4554 1.466186 AGAGGGACCTTTGGGCCTT 60.466 57.895 8.56 0.00 35.63 4.35
2168 4565 1.686325 TTATGCGGGCTGAGAGGGAC 61.686 60.000 0.00 0.00 0.00 4.46
2170 4567 0.533755 CTTTATGCGGGCTGAGAGGG 60.534 60.000 0.00 0.00 0.00 4.30
2171 4568 0.465705 TCTTTATGCGGGCTGAGAGG 59.534 55.000 0.00 0.00 0.00 3.69
2349 4760 3.011513 GTACTCGTGTACTGTGCCG 57.988 57.895 18.11 0.00 44.08 5.69
2367 4778 1.068748 ACGTACGGTACACTGAAGCAG 60.069 52.381 21.06 0.00 37.52 4.24
2417 4845 1.351017 ACACACGAAACCCATCTCCAT 59.649 47.619 0.00 0.00 0.00 3.41
2421 4849 1.002087 GAGGACACACGAAACCCATCT 59.998 52.381 0.00 0.00 0.00 2.90
2422 4850 1.002087 AGAGGACACACGAAACCCATC 59.998 52.381 0.00 0.00 0.00 3.51
2427 4855 1.583054 AGCAAGAGGACACACGAAAC 58.417 50.000 0.00 0.00 0.00 2.78
2428 4856 1.939934 CAAGCAAGAGGACACACGAAA 59.060 47.619 0.00 0.00 0.00 3.46
2430 4858 0.880278 GCAAGCAAGAGGACACACGA 60.880 55.000 0.00 0.00 0.00 4.35
2431 4859 1.159713 TGCAAGCAAGAGGACACACG 61.160 55.000 0.00 0.00 0.00 4.49
2432 4860 1.242076 ATGCAAGCAAGAGGACACAC 58.758 50.000 0.00 0.00 0.00 3.82
2433 4861 1.985473 AATGCAAGCAAGAGGACACA 58.015 45.000 0.00 0.00 0.00 3.72
2434 4862 3.054878 CAAAATGCAAGCAAGAGGACAC 58.945 45.455 0.00 0.00 0.00 3.67
2435 4863 2.694628 ACAAAATGCAAGCAAGAGGACA 59.305 40.909 0.00 0.00 0.00 4.02
2437 4865 3.225104 AGACAAAATGCAAGCAAGAGGA 58.775 40.909 0.00 0.00 0.00 3.71
2438 4866 3.655276 AGACAAAATGCAAGCAAGAGG 57.345 42.857 0.00 0.00 0.00 3.69
2439 4867 4.456911 TCCTAGACAAAATGCAAGCAAGAG 59.543 41.667 0.00 0.00 0.00 2.85
2440 4868 4.397420 TCCTAGACAAAATGCAAGCAAGA 58.603 39.130 0.00 0.00 0.00 3.02
2441 4869 4.380233 CCTCCTAGACAAAATGCAAGCAAG 60.380 45.833 0.00 0.00 0.00 4.01
2442 4870 3.507233 CCTCCTAGACAAAATGCAAGCAA 59.493 43.478 0.00 0.00 0.00 3.91
2443 4871 3.084039 CCTCCTAGACAAAATGCAAGCA 58.916 45.455 0.00 0.00 0.00 3.91
2444 4872 2.424956 CCCTCCTAGACAAAATGCAAGC 59.575 50.000 0.00 0.00 0.00 4.01
2445 4873 2.424956 GCCCTCCTAGACAAAATGCAAG 59.575 50.000 0.00 0.00 0.00 4.01
2446 4874 2.041620 AGCCCTCCTAGACAAAATGCAA 59.958 45.455 0.00 0.00 0.00 4.08
2448 4876 2.293170 GAGCCCTCCTAGACAAAATGC 58.707 52.381 0.00 0.00 0.00 3.56
2449 4877 3.634397 TGAGCCCTCCTAGACAAAATG 57.366 47.619 0.00 0.00 0.00 2.32
2450 4878 3.117738 CCATGAGCCCTCCTAGACAAAAT 60.118 47.826 0.00 0.00 0.00 1.82
2451 4879 2.239654 CCATGAGCCCTCCTAGACAAAA 59.760 50.000 0.00 0.00 0.00 2.44
2452 4880 1.839994 CCATGAGCCCTCCTAGACAAA 59.160 52.381 0.00 0.00 0.00 2.83
2453 4881 1.273838 ACCATGAGCCCTCCTAGACAA 60.274 52.381 0.00 0.00 0.00 3.18
2454 4882 0.339859 ACCATGAGCCCTCCTAGACA 59.660 55.000 0.00 0.00 0.00 3.41
2455 4883 0.755686 CACCATGAGCCCTCCTAGAC 59.244 60.000 0.00 0.00 0.00 2.59
2456 4884 0.339859 ACACCATGAGCCCTCCTAGA 59.660 55.000 0.00 0.00 0.00 2.43
2457 4885 1.134280 CAACACCATGAGCCCTCCTAG 60.134 57.143 0.00 0.00 0.00 3.02
2458 4886 0.911769 CAACACCATGAGCCCTCCTA 59.088 55.000 0.00 0.00 0.00 2.94
2488 4916 0.978146 CCTCCACCTCCACCTACCAG 60.978 65.000 0.00 0.00 0.00 4.00
2599 5081 3.195825 AGTTTAGCCAGCAGAACGTAGAT 59.804 43.478 0.00 0.00 0.00 1.98
2605 5087 1.897560 ACCAGTTTAGCCAGCAGAAC 58.102 50.000 0.00 0.00 0.00 3.01
2619 5101 6.349777 GCGAGAATAGATAGATGCTTACCAGT 60.350 42.308 0.00 0.00 0.00 4.00
2635 5117 3.119291 GTCTGATGTGTGGCGAGAATAG 58.881 50.000 0.00 0.00 0.00 1.73
2643 5125 1.736126 CAGTGATGTCTGATGTGTGGC 59.264 52.381 0.00 0.00 37.61 5.01
2647 5136 5.658468 ACAGATACAGTGATGTCTGATGTG 58.342 41.667 21.92 6.49 40.30 3.21
2654 5143 6.458232 AAGGTAGACAGATACAGTGATGTC 57.542 41.667 0.00 5.84 41.86 3.06
2722 5215 3.425193 GCCTCACATTTTTAACACAAGCG 59.575 43.478 0.00 0.00 0.00 4.68
2745 5246 5.816682 TCTATCTACTCACAGTTGACCTCA 58.183 41.667 0.00 0.00 33.15 3.86
2746 5247 6.761099 TTCTATCTACTCACAGTTGACCTC 57.239 41.667 0.00 0.00 33.15 3.85
2911 5413 6.650427 AAATACGATGCAGATGTAGGAGTA 57.350 37.500 0.00 0.00 0.00 2.59
2912 5414 5.537300 AAATACGATGCAGATGTAGGAGT 57.463 39.130 0.00 0.00 0.00 3.85
2913 5415 6.447162 TGTAAATACGATGCAGATGTAGGAG 58.553 40.000 0.00 0.00 0.00 3.69
2914 5416 6.399639 TGTAAATACGATGCAGATGTAGGA 57.600 37.500 0.00 0.00 0.00 2.94
2915 5417 7.062722 CAGATGTAAATACGATGCAGATGTAGG 59.937 40.741 0.00 0.00 0.00 3.18
2916 5418 7.596621 ACAGATGTAAATACGATGCAGATGTAG 59.403 37.037 0.00 0.00 0.00 2.74
2925 5427 7.322938 CCAGTACGTACAGATGTAAATACGATG 59.677 40.741 26.55 10.33 42.27 3.84
2928 5430 6.489675 ACCAGTACGTACAGATGTAAATACG 58.510 40.000 26.55 5.49 44.56 3.06
2977 5482 3.004002 GGTTTACCGTGTTCTTTTCCTGG 59.996 47.826 0.00 0.00 0.00 4.45
3005 5510 4.948341 TGCCGGTAAGATAAATCTGCTA 57.052 40.909 1.90 0.00 37.19 3.49
3047 5552 1.911293 TTTGCTCGCACAAGATCGCC 61.911 55.000 0.00 0.00 0.00 5.54
3049 5554 0.519999 GCTTTGCTCGCACAAGATCG 60.520 55.000 13.91 0.00 0.00 3.69
3060 5565 6.567050 TCAATCATCATAAAAGGCTTTGCTC 58.433 36.000 14.19 0.00 0.00 4.26
3079 5587 0.931005 GACCCGCTCGTCAATCAATC 59.069 55.000 0.00 0.00 32.74 2.67
3214 5726 2.831366 CGGCACATGGATCTGCAGC 61.831 63.158 9.47 0.00 34.90 5.25
3215 5727 1.434622 GACGGCACATGGATCTGCAG 61.435 60.000 7.63 7.63 34.90 4.41
3271 5783 4.864806 TGCTTTACTTAGTTGAGAGATGCG 59.135 41.667 0.00 0.00 0.00 4.73
3279 5791 3.251487 GGCCGTTTGCTTTACTTAGTTGA 59.749 43.478 0.00 0.00 40.92 3.18
3315 5827 3.673338 TGTCGACATGAATGAACGAAGAC 59.327 43.478 15.76 7.75 39.72 3.01
3344 5856 4.235360 ACTAGCACTACATCGTTGTTGTC 58.765 43.478 10.18 6.63 39.34 3.18
3346 5858 6.365247 ACTTTACTAGCACTACATCGTTGTTG 59.635 38.462 4.14 5.50 37.28 3.33
3372 5884 2.069273 CTGACTCGGTTTCCACATGAC 58.931 52.381 0.00 0.00 0.00 3.06
3407 5919 3.244033 AGCAGCTAGTGATGACAAGAC 57.756 47.619 0.00 0.00 0.00 3.01
3429 5948 4.487019 GTTCAGACAAGGTCTAGCAGTAC 58.513 47.826 0.00 0.00 41.37 2.73
3434 5953 3.246619 CTTCGTTCAGACAAGGTCTAGC 58.753 50.000 0.00 0.00 41.37 3.42
3451 6005 0.796312 CACACGTTCCCATTCCTTCG 59.204 55.000 0.00 0.00 0.00 3.79
3456 6010 0.591170 CACCACACACGTTCCCATTC 59.409 55.000 0.00 0.00 0.00 2.67
3473 6027 1.806568 CAACCACACCACACCACAC 59.193 57.895 0.00 0.00 0.00 3.82
3474 6028 2.049185 GCAACCACACCACACCACA 61.049 57.895 0.00 0.00 0.00 4.17
3475 6029 2.003658 CTGCAACCACACCACACCAC 62.004 60.000 0.00 0.00 0.00 4.16
3476 6030 1.752310 CTGCAACCACACCACACCA 60.752 57.895 0.00 0.00 0.00 4.17
3477 6031 3.119193 CTGCAACCACACCACACC 58.881 61.111 0.00 0.00 0.00 4.16
3692 6248 2.098117 ACAGACAAACTCAGCAGCAAAC 59.902 45.455 0.00 0.00 0.00 2.93
3693 6249 2.355756 GACAGACAAACTCAGCAGCAAA 59.644 45.455 0.00 0.00 0.00 3.68
3716 6272 1.359459 GGATCACGCAGGAACGAACC 61.359 60.000 0.00 0.00 36.70 3.62
3754 6315 6.128172 GGTTAAAGAACACAGGATGACAGATG 60.128 42.308 0.00 0.00 36.03 2.90
3764 6327 1.796459 CGACGGGTTAAAGAACACAGG 59.204 52.381 0.00 0.00 39.09 4.00
3770 6333 3.141002 CTCGATCGACGGGTTAAAGAA 57.859 47.619 15.15 0.00 42.82 2.52
3838 6406 2.724721 AGCGACACACGAACGACG 60.725 61.111 0.14 0.00 45.77 5.12
3885 6457 9.386010 AGACTTTACATTTTACAGTACAACACA 57.614 29.630 0.00 0.00 0.00 3.72
3893 6465 9.614792 ACTCTTTCAGACTTTACATTTTACAGT 57.385 29.630 0.00 0.00 0.00 3.55
3960 6535 6.774354 AGTTGGTACTACAAATTACACACG 57.226 37.500 0.00 0.00 31.21 4.49
3991 6569 3.257393 CAGTCTCGCAGCAGTAAAGATT 58.743 45.455 0.00 0.00 0.00 2.40
4057 6637 2.225019 CACTCAACAACAGCATCAGTCC 59.775 50.000 0.00 0.00 0.00 3.85
4096 6676 3.678072 CAGCAATGAAAGCCTCAAACATG 59.322 43.478 0.00 0.00 37.67 3.21
4099 6679 2.064014 GCAGCAATGAAAGCCTCAAAC 58.936 47.619 0.00 0.00 37.67 2.93
4154 6756 7.737972 TCGTTTTAGATCTCCAATTTTCACA 57.262 32.000 0.00 0.00 0.00 3.58
4184 6786 2.040213 GATGTCACCGCGATGCCAAG 62.040 60.000 8.23 0.00 0.00 3.61
4272 6874 2.480759 GCCAAGACAATGATGCATCACC 60.481 50.000 30.92 19.02 40.03 4.02
4276 6878 3.220110 CCTAGCCAAGACAATGATGCAT 58.780 45.455 0.00 0.00 0.00 3.96
4342 6947 3.333381 TGGGATTGGATTCAGTGAAGGAA 59.667 43.478 11.91 4.32 0.00 3.36
4355 6960 1.224315 CGACCATGCTGGGATTGGA 59.776 57.895 7.06 0.00 43.37 3.53
4356 6961 1.077501 ACGACCATGCTGGGATTGG 60.078 57.895 7.06 0.00 43.37 3.16
4358 6963 1.153369 CGACGACCATGCTGGGATT 60.153 57.895 7.06 0.00 43.37 3.01
4359 6964 2.501128 CGACGACCATGCTGGGAT 59.499 61.111 7.06 0.00 43.37 3.85
4360 6965 3.770040 CCGACGACCATGCTGGGA 61.770 66.667 0.00 0.00 43.37 4.37
4363 6968 3.190849 CAGCCGACGACCATGCTG 61.191 66.667 8.32 8.32 44.43 4.41
4364 6969 4.457496 CCAGCCGACGACCATGCT 62.457 66.667 0.00 0.00 33.52 3.79
4396 7014 3.366739 AAGCGACGATCGGGGTTCC 62.367 63.158 20.98 2.42 40.84 3.62
4411 7029 3.929948 CGATCCGCGCCTTCAAGC 61.930 66.667 0.00 0.00 0.00 4.01
4470 7088 1.002502 GAGTGGGGGTGTTGTAGCC 60.003 63.158 0.00 0.00 46.47 3.93
4471 7089 1.375523 CGAGTGGGGGTGTTGTAGC 60.376 63.158 0.00 0.00 0.00 3.58
4472 7090 1.375523 GCGAGTGGGGGTGTTGTAG 60.376 63.158 0.00 0.00 0.00 2.74
4473 7091 2.107041 CTGCGAGTGGGGGTGTTGTA 62.107 60.000 0.00 0.00 0.00 2.41
4474 7092 3.476031 CTGCGAGTGGGGGTGTTGT 62.476 63.158 0.00 0.00 0.00 3.32
4475 7093 2.669569 CTGCGAGTGGGGGTGTTG 60.670 66.667 0.00 0.00 0.00 3.33
4476 7094 3.953775 CCTGCGAGTGGGGGTGTT 61.954 66.667 0.00 0.00 0.00 3.32
4477 7095 4.954118 TCCTGCGAGTGGGGGTGT 62.954 66.667 0.00 0.00 0.00 4.16
4478 7096 3.612247 CTTCCTGCGAGTGGGGGTG 62.612 68.421 0.00 0.00 0.00 4.61
4479 7097 3.322466 CTTCCTGCGAGTGGGGGT 61.322 66.667 0.00 0.00 0.00 4.95
4480 7098 4.101448 CCTTCCTGCGAGTGGGGG 62.101 72.222 0.00 0.00 0.00 5.40
4481 7099 3.003173 TCCTTCCTGCGAGTGGGG 61.003 66.667 0.00 0.00 0.00 4.96
4482 7100 2.266055 GTCCTTCCTGCGAGTGGG 59.734 66.667 0.00 0.00 0.00 4.61
4483 7101 2.111999 TTGGTCCTTCCTGCGAGTGG 62.112 60.000 0.00 0.00 37.07 4.00
4484 7102 0.671781 CTTGGTCCTTCCTGCGAGTG 60.672 60.000 0.00 0.00 37.07 3.51
4485 7103 1.674057 CTTGGTCCTTCCTGCGAGT 59.326 57.895 0.00 0.00 37.07 4.18
4486 7104 1.743252 GCTTGGTCCTTCCTGCGAG 60.743 63.158 0.00 0.00 37.07 5.03
4487 7105 2.347490 GCTTGGTCCTTCCTGCGA 59.653 61.111 0.00 0.00 37.07 5.10
4488 7106 2.747855 GGCTTGGTCCTTCCTGCG 60.748 66.667 0.00 0.00 37.29 5.18
4489 7107 2.361737 GGGCTTGGTCCTTCCTGC 60.362 66.667 0.00 0.00 37.07 4.85
4490 7108 0.394899 GATGGGCTTGGTCCTTCCTG 60.395 60.000 0.00 0.00 37.07 3.86
4491 7109 1.915078 CGATGGGCTTGGTCCTTCCT 61.915 60.000 0.00 0.00 37.07 3.36
4492 7110 1.452108 CGATGGGCTTGGTCCTTCC 60.452 63.158 0.00 0.00 29.16 3.46
4493 7111 0.462759 CTCGATGGGCTTGGTCCTTC 60.463 60.000 0.00 0.00 0.00 3.46
4494 7112 1.604378 CTCGATGGGCTTGGTCCTT 59.396 57.895 0.00 0.00 0.00 3.36
4495 7113 3.036429 GCTCGATGGGCTTGGTCCT 62.036 63.158 0.00 0.00 0.00 3.85
4496 7114 2.514824 GCTCGATGGGCTTGGTCC 60.515 66.667 0.00 0.00 0.00 4.46
4497 7115 2.514824 GGCTCGATGGGCTTGGTC 60.515 66.667 0.00 0.00 0.00 4.02
4498 7116 3.329889 TGGCTCGATGGGCTTGGT 61.330 61.111 0.00 0.00 0.00 3.67
4499 7117 2.825836 GTGGCTCGATGGGCTTGG 60.826 66.667 0.00 0.00 0.00 3.61
4500 7118 3.197790 CGTGGCTCGATGGGCTTG 61.198 66.667 2.21 0.00 42.86 4.01
4501 7119 3.390521 TCGTGGCTCGATGGGCTT 61.391 61.111 7.67 0.00 44.01 4.35
4508 7126 3.220999 CTGTTGGGTCGTGGCTCGA 62.221 63.158 7.67 7.67 46.83 4.04
4509 7127 2.738521 CTGTTGGGTCGTGGCTCG 60.739 66.667 1.94 1.94 41.41 5.03
4510 7128 1.374758 CTCTGTTGGGTCGTGGCTC 60.375 63.158 0.00 0.00 0.00 4.70
4511 7129 2.743718 CTCTGTTGGGTCGTGGCT 59.256 61.111 0.00 0.00 0.00 4.75
4512 7130 3.050275 GCTCTGTTGGGTCGTGGC 61.050 66.667 0.00 0.00 0.00 5.01
4513 7131 2.358737 GGCTCTGTTGGGTCGTGG 60.359 66.667 0.00 0.00 0.00 4.94
4514 7132 2.358737 GGGCTCTGTTGGGTCGTG 60.359 66.667 0.00 0.00 0.00 4.35
4515 7133 4.003788 CGGGCTCTGTTGGGTCGT 62.004 66.667 0.00 0.00 0.00 4.34
4517 7135 4.329545 TGCGGGCTCTGTTGGGTC 62.330 66.667 0.00 0.00 0.00 4.46
4518 7136 4.335647 CTGCGGGCTCTGTTGGGT 62.336 66.667 0.00 0.00 0.00 4.51
4533 7151 3.950794 TAAGCGCTGGTTCGGCCTG 62.951 63.158 12.58 0.00 38.35 4.85
4534 7152 3.031417 ATAAGCGCTGGTTCGGCCT 62.031 57.895 12.58 0.00 38.35 5.19
4535 7153 2.513897 ATAAGCGCTGGTTCGGCC 60.514 61.111 12.58 0.00 37.90 6.13
4536 7154 2.106683 ACATAAGCGCTGGTTCGGC 61.107 57.895 12.58 0.00 0.00 5.54
4537 7155 1.705337 CCACATAAGCGCTGGTTCGG 61.705 60.000 12.58 5.77 0.00 4.30
4538 7156 1.715585 CCACATAAGCGCTGGTTCG 59.284 57.895 12.58 0.11 0.00 3.95
4539 7157 1.429423 GCCACATAAGCGCTGGTTC 59.571 57.895 12.58 0.67 0.00 3.62
4540 7158 2.046285 GGCCACATAAGCGCTGGTT 61.046 57.895 12.58 0.00 0.00 3.67
4541 7159 2.438434 GGCCACATAAGCGCTGGT 60.438 61.111 12.58 7.33 0.00 4.00
4542 7160 3.211963 GGGCCACATAAGCGCTGG 61.212 66.667 12.58 9.94 39.86 4.85
4543 7161 3.576356 CGGGCCACATAAGCGCTG 61.576 66.667 12.58 0.89 40.75 5.18
4544 7162 4.856801 CCGGGCCACATAAGCGCT 62.857 66.667 2.64 2.64 40.75 5.92
4545 7163 4.849310 TCCGGGCCACATAAGCGC 62.849 66.667 4.39 0.00 39.62 5.92
4546 7164 2.588877 CTCCGGGCCACATAAGCG 60.589 66.667 4.39 0.00 0.00 4.68
4547 7165 1.819632 CACTCCGGGCCACATAAGC 60.820 63.158 4.39 0.00 0.00 3.09
4548 7166 1.153168 CCACTCCGGGCCACATAAG 60.153 63.158 4.39 0.00 0.00 1.73
4549 7167 2.994699 CCACTCCGGGCCACATAA 59.005 61.111 4.39 0.00 0.00 1.90
4566 7184 2.046604 GTAGGTTGGGCCGTCACC 60.047 66.667 10.65 10.65 43.70 4.02
4567 7185 2.046604 GGTAGGTTGGGCCGTCAC 60.047 66.667 0.00 0.00 43.70 3.67
4568 7186 2.203877 AGGTAGGTTGGGCCGTCA 60.204 61.111 0.00 0.00 43.70 4.35
4569 7187 0.685458 TAGAGGTAGGTTGGGCCGTC 60.685 60.000 0.00 0.00 43.70 4.79
4570 7188 0.974525 GTAGAGGTAGGTTGGGCCGT 60.975 60.000 0.00 0.00 43.70 5.68
4571 7189 0.686769 AGTAGAGGTAGGTTGGGCCG 60.687 60.000 0.00 0.00 43.70 6.13
4572 7190 1.581223 AAGTAGAGGTAGGTTGGGCC 58.419 55.000 0.00 0.00 37.58 5.80
4573 7191 3.431905 GCTTAAGTAGAGGTAGGTTGGGC 60.432 52.174 4.02 0.00 0.00 5.36
4574 7192 3.181478 CGCTTAAGTAGAGGTAGGTTGGG 60.181 52.174 4.02 0.00 0.00 4.12
4575 7193 3.446516 ACGCTTAAGTAGAGGTAGGTTGG 59.553 47.826 4.02 0.00 0.00 3.77
4576 7194 4.421948 CACGCTTAAGTAGAGGTAGGTTG 58.578 47.826 4.02 0.00 0.00 3.77
4577 7195 3.446516 CCACGCTTAAGTAGAGGTAGGTT 59.553 47.826 4.02 0.00 0.00 3.50
4578 7196 3.022406 CCACGCTTAAGTAGAGGTAGGT 58.978 50.000 4.02 0.00 0.00 3.08
4579 7197 2.223758 GCCACGCTTAAGTAGAGGTAGG 60.224 54.545 4.02 0.00 0.00 3.18
4580 7198 2.426024 TGCCACGCTTAAGTAGAGGTAG 59.574 50.000 4.02 0.00 0.00 3.18
4581 7199 2.165030 GTGCCACGCTTAAGTAGAGGTA 59.835 50.000 4.02 4.12 0.00 3.08
4582 7200 1.067071 GTGCCACGCTTAAGTAGAGGT 60.067 52.381 4.02 0.00 0.00 3.85
4583 7201 1.204941 AGTGCCACGCTTAAGTAGAGG 59.795 52.381 4.02 8.04 0.00 3.69
4584 7202 2.656560 AGTGCCACGCTTAAGTAGAG 57.343 50.000 4.02 0.00 0.00 2.43
4585 7203 2.297880 TGAAGTGCCACGCTTAAGTAGA 59.702 45.455 4.02 0.00 34.12 2.59
4586 7204 2.683968 TGAAGTGCCACGCTTAAGTAG 58.316 47.619 4.02 1.54 34.12 2.57
4587 7205 2.803956 GTTGAAGTGCCACGCTTAAGTA 59.196 45.455 4.02 0.00 34.12 2.24
4588 7206 1.602377 GTTGAAGTGCCACGCTTAAGT 59.398 47.619 4.02 0.00 34.12 2.24
4589 7207 1.069227 GGTTGAAGTGCCACGCTTAAG 60.069 52.381 0.00 0.00 34.12 1.85
4590 7208 0.948678 GGTTGAAGTGCCACGCTTAA 59.051 50.000 0.00 0.00 34.12 1.85
4591 7209 0.887387 GGGTTGAAGTGCCACGCTTA 60.887 55.000 0.00 0.00 34.12 3.09
4592 7210 2.193536 GGGTTGAAGTGCCACGCTT 61.194 57.895 0.00 0.00 36.87 4.68
4593 7211 1.764571 TAGGGTTGAAGTGCCACGCT 61.765 55.000 0.00 0.00 0.00 5.07
4594 7212 1.298859 CTAGGGTTGAAGTGCCACGC 61.299 60.000 0.00 0.00 0.00 5.34
4595 7213 0.320374 TCTAGGGTTGAAGTGCCACG 59.680 55.000 0.00 0.00 0.00 4.94
4596 7214 1.623811 TCTCTAGGGTTGAAGTGCCAC 59.376 52.381 0.00 0.00 0.00 5.01
4597 7215 1.623811 GTCTCTAGGGTTGAAGTGCCA 59.376 52.381 0.00 0.00 0.00 4.92
4598 7216 1.903183 AGTCTCTAGGGTTGAAGTGCC 59.097 52.381 0.00 0.00 0.00 5.01
4599 7217 4.202172 GGATAGTCTCTAGGGTTGAAGTGC 60.202 50.000 0.00 0.00 0.00 4.40
4600 7218 4.956700 TGGATAGTCTCTAGGGTTGAAGTG 59.043 45.833 0.00 0.00 0.00 3.16
4601 7219 5.044030 TCTGGATAGTCTCTAGGGTTGAAGT 60.044 44.000 0.00 0.00 33.45 3.01
4602 7220 5.450453 TCTGGATAGTCTCTAGGGTTGAAG 58.550 45.833 0.00 0.00 33.45 3.02
4603 7221 5.450453 CTCTGGATAGTCTCTAGGGTTGAA 58.550 45.833 0.00 0.00 33.45 2.69
4604 7222 4.141135 CCTCTGGATAGTCTCTAGGGTTGA 60.141 50.000 0.00 0.00 31.08 3.18
4605 7223 4.141135 TCCTCTGGATAGTCTCTAGGGTTG 60.141 50.000 0.00 0.00 31.08 3.77
4606 7224 4.055820 TCCTCTGGATAGTCTCTAGGGTT 58.944 47.826 0.00 0.00 31.08 4.11
4607 7225 3.682455 TCCTCTGGATAGTCTCTAGGGT 58.318 50.000 0.00 0.00 31.08 4.34
4608 7226 4.290985 TGATCCTCTGGATAGTCTCTAGGG 59.709 50.000 0.00 0.00 43.27 3.53
4609 7227 5.253330 GTGATCCTCTGGATAGTCTCTAGG 58.747 50.000 0.00 0.00 43.27 3.02
4610 7228 4.935205 CGTGATCCTCTGGATAGTCTCTAG 59.065 50.000 0.00 0.00 43.27 2.43
4611 7229 4.263112 CCGTGATCCTCTGGATAGTCTCTA 60.263 50.000 0.00 0.00 43.27 2.43
4612 7230 3.497763 CCGTGATCCTCTGGATAGTCTCT 60.498 52.174 0.00 0.00 43.27 3.10
4613 7231 2.817258 CCGTGATCCTCTGGATAGTCTC 59.183 54.545 0.00 0.00 43.27 3.36
4614 7232 2.870175 CCGTGATCCTCTGGATAGTCT 58.130 52.381 0.00 0.00 43.27 3.24
4615 7233 1.271102 GCCGTGATCCTCTGGATAGTC 59.729 57.143 0.00 0.00 43.27 2.59
4616 7234 1.333177 GCCGTGATCCTCTGGATAGT 58.667 55.000 0.00 0.00 43.27 2.12
4617 7235 0.242286 CGCCGTGATCCTCTGGATAG 59.758 60.000 0.00 0.00 43.27 2.08
4618 7236 1.179174 CCGCCGTGATCCTCTGGATA 61.179 60.000 0.00 0.00 43.27 2.59
4619 7237 2.502492 CCGCCGTGATCCTCTGGAT 61.502 63.158 0.00 0.00 46.28 3.41
4620 7238 3.147595 CCGCCGTGATCCTCTGGA 61.148 66.667 0.00 0.00 35.55 3.86
4621 7239 4.899239 GCCGCCGTGATCCTCTGG 62.899 72.222 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.