Multiple sequence alignment - TraesCS3D01G377400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G377400 chr3D 100.000 3962 0 0 1 3962 494655870 494651909 0.000000e+00 7317.0
1 TraesCS3D01G377400 chr3D 91.523 1392 78 10 1371 2729 128432365 128430981 0.000000e+00 1881.0
2 TraesCS3D01G377400 chr3D 90.196 153 8 5 3040 3189 533955654 533955506 4.040000e-45 193.0
3 TraesCS3D01G377400 chr3D 93.023 43 3 0 3563 3605 93614856 93614898 3.310000e-06 63.9
4 TraesCS3D01G377400 chr3B 92.175 1393 69 21 1369 2725 82839987 82841375 0.000000e+00 1932.0
5 TraesCS3D01G377400 chr3B 92.367 1297 81 10 86 1369 654069561 654068270 0.000000e+00 1831.0
6 TraesCS3D01G377400 chr3B 89.849 1389 103 24 1372 2726 386976218 386977602 0.000000e+00 1749.0
7 TraesCS3D01G377400 chr3B 79.590 877 174 5 495 1369 654343026 654342153 1.210000e-174 623.0
8 TraesCS3D01G377400 chr3B 76.109 879 180 24 502 1369 654062923 654062064 2.190000e-117 433.0
9 TraesCS3D01G377400 chr3B 92.517 294 15 6 2742 3031 654068274 654067984 7.920000e-112 414.0
10 TraesCS3D01G377400 chr3B 74.070 887 205 17 495 1369 654083317 654082444 1.360000e-89 340.0
11 TraesCS3D01G377400 chr3B 82.470 251 22 10 3193 3437 654067869 654067635 2.410000e-47 200.0
12 TraesCS3D01G377400 chr3B 82.353 221 16 14 3737 3954 685399622 685399422 1.890000e-38 171.0
13 TraesCS3D01G377400 chr3B 81.938 227 16 16 3739 3962 96831387 96831183 6.810000e-38 169.0
14 TraesCS3D01G377400 chr3B 90.598 117 10 1 3844 3959 642211536 642211652 1.910000e-33 154.0
15 TraesCS3D01G377400 chr1D 92.252 1381 67 14 1371 2717 28624692 28626066 0.000000e+00 1921.0
16 TraesCS3D01G377400 chr1D 91.194 1340 83 10 1372 2685 34586736 34588066 0.000000e+00 1788.0
17 TraesCS3D01G377400 chr1D 90.741 54 4 1 3516 3568 465126600 465126547 1.980000e-08 71.3
18 TraesCS3D01G377400 chr1D 90.566 53 3 1 3516 3568 284242741 284242691 7.100000e-08 69.4
19 TraesCS3D01G377400 chr1D 87.931 58 5 2 3513 3568 483064534 483064477 2.560000e-07 67.6
20 TraesCS3D01G377400 chr4B 91.905 1396 75 14 1365 2726 156528438 156529829 0.000000e+00 1917.0
21 TraesCS3D01G377400 chr6A 91.264 1385 78 13 1369 2720 14131018 14132392 0.000000e+00 1847.0
22 TraesCS3D01G377400 chr6A 87.135 171 17 4 3019 3187 440537552 440537719 5.230000e-44 189.0
23 TraesCS3D01G377400 chr6A 82.524 206 32 3 2523 2728 608364075 608363874 1.130000e-40 178.0
24 TraesCS3D01G377400 chr6A 87.037 162 13 6 3026 3186 145188769 145188615 4.070000e-40 176.0
25 TraesCS3D01G377400 chrUn 91.166 1381 89 14 1370 2723 70551883 70550509 0.000000e+00 1844.0
26 TraesCS3D01G377400 chr5D 90.889 1383 89 13 1369 2723 398651420 398650047 0.000000e+00 1821.0
27 TraesCS3D01G377400 chr5D 92.218 1195 74 8 1369 2549 408345894 408347083 0.000000e+00 1674.0
28 TraesCS3D01G377400 chr5D 91.667 144 9 2 3040 3182 429353575 429353716 3.120000e-46 196.0
29 TraesCS3D01G377400 chr5D 92.857 42 3 0 3527 3568 544792966 544792925 1.190000e-05 62.1
30 TraesCS3D01G377400 chr2A 90.949 1370 90 15 1369 2713 17108876 17107516 0.000000e+00 1812.0
31 TraesCS3D01G377400 chr2A 91.946 149 8 3 3040 3186 718134092 718134238 5.190000e-49 206.0
32 TraesCS3D01G377400 chr2A 90.517 116 11 0 3844 3959 735970480 735970365 1.910000e-33 154.0
33 TraesCS3D01G377400 chr2A 88.889 45 5 0 3563 3607 715471688 715471732 5.530000e-04 56.5
34 TraesCS3D01G377400 chr1A 89.993 1389 104 15 1372 2727 584305989 584304603 0.000000e+00 1762.0
35 TraesCS3D01G377400 chr1A 89.286 56 4 1 3513 3568 396109106 396109053 7.100000e-08 69.4
36 TraesCS3D01G377400 chr1A 93.023 43 2 1 3563 3605 53670580 53670621 1.190000e-05 62.1
37 TraesCS3D01G377400 chr7D 93.656 1135 66 6 1365 2496 220505215 220506346 0.000000e+00 1692.0
38 TraesCS3D01G377400 chr7D 86.864 236 16 6 2496 2720 220506651 220506882 2.360000e-62 250.0
39 TraesCS3D01G377400 chr7D 92.308 52 3 1 3517 3568 194482102 194482052 5.490000e-09 73.1
40 TraesCS3D01G377400 chr6D 89.595 1086 69 23 1648 2720 114166884 114167938 0.000000e+00 1339.0
41 TraesCS3D01G377400 chr6D 89.222 167 12 4 3026 3190 85090418 85090580 1.870000e-48 204.0
42 TraesCS3D01G377400 chr6D 89.130 46 3 2 3569 3612 28399414 28399459 5.530000e-04 56.5
43 TraesCS3D01G377400 chr3A 94.203 828 45 2 544 1369 634185520 634184694 0.000000e+00 1260.0
44 TraesCS3D01G377400 chr3A 95.000 420 20 1 60 478 634185941 634185522 0.000000e+00 658.0
45 TraesCS3D01G377400 chr3A 94.718 284 12 2 2742 3022 634184698 634184415 4.700000e-119 438.0
46 TraesCS3D01G377400 chr3A 94.231 208 11 1 3183 3389 634184420 634184213 2.300000e-82 316.0
47 TraesCS3D01G377400 chr3A 97.222 72 2 0 1 72 634189572 634189501 5.380000e-24 122.0
48 TraesCS3D01G377400 chr3A 97.143 35 1 0 3572 3606 714380440 714380406 4.280000e-05 60.2
49 TraesCS3D01G377400 chr3A 89.130 46 3 2 3569 3613 88852943 88852899 5.530000e-04 56.5
50 TraesCS3D01G377400 chr3A 86.538 52 5 2 3563 3614 425145475 425145524 5.530000e-04 56.5
51 TraesCS3D01G377400 chr3A 84.906 53 8 0 3569 3621 741447966 741447914 2.000000e-03 54.7
52 TraesCS3D01G377400 chr3A 84.906 53 8 0 3569 3621 741537280 741537228 2.000000e-03 54.7
53 TraesCS3D01G377400 chr4A 91.391 151 11 2 3034 3183 619148300 619148449 5.190000e-49 206.0
54 TraesCS3D01G377400 chr4A 90.541 148 11 2 3040 3186 678341582 678341437 4.040000e-45 193.0
55 TraesCS3D01G377400 chr1B 89.286 168 13 4 3020 3183 566027903 566027737 5.190000e-49 206.0
56 TraesCS3D01G377400 chr1B 74.249 233 42 7 1127 1350 653842231 653842454 9.130000e-12 82.4
57 TraesCS3D01G377400 chr5A 82.949 217 13 15 3739 3953 43543641 43543447 1.460000e-39 174.0
58 TraesCS3D01G377400 chr5A 81.614 223 19 13 3738 3959 239402923 239403124 8.810000e-37 165.0
59 TraesCS3D01G377400 chr5B 92.793 111 8 0 3844 3954 404194254 404194364 1.140000e-35 161.0
60 TraesCS3D01G377400 chr7A 91.453 117 6 2 3843 3959 100549402 100549514 1.470000e-34 158.0
61 TraesCS3D01G377400 chr7A 90.517 116 11 0 3844 3959 553044914 553045029 1.910000e-33 154.0
62 TraesCS3D01G377400 chr6B 90.566 53 5 0 3516 3568 39369566 39369618 1.980000e-08 71.3
63 TraesCS3D01G377400 chr6B 92.157 51 2 1 3518 3568 179340682 179340730 1.980000e-08 71.3
64 TraesCS3D01G377400 chr2B 92.157 51 2 2 3516 3566 716549839 716549887 1.980000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G377400 chr3D 494651909 494655870 3961 True 7317.0 7317 100.0000 1 3962 1 chr3D.!!$R2 3961
1 TraesCS3D01G377400 chr3D 128430981 128432365 1384 True 1881.0 1881 91.5230 1371 2729 1 chr3D.!!$R1 1358
2 TraesCS3D01G377400 chr3B 82839987 82841375 1388 False 1932.0 1932 92.1750 1369 2725 1 chr3B.!!$F1 1356
3 TraesCS3D01G377400 chr3B 386976218 386977602 1384 False 1749.0 1749 89.8490 1372 2726 1 chr3B.!!$F2 1354
4 TraesCS3D01G377400 chr3B 654067635 654069561 1926 True 815.0 1831 89.1180 86 3437 3 chr3B.!!$R6 3351
5 TraesCS3D01G377400 chr3B 654342153 654343026 873 True 623.0 623 79.5900 495 1369 1 chr3B.!!$R4 874
6 TraesCS3D01G377400 chr3B 654062064 654062923 859 True 433.0 433 76.1090 502 1369 1 chr3B.!!$R2 867
7 TraesCS3D01G377400 chr3B 654082444 654083317 873 True 340.0 340 74.0700 495 1369 1 chr3B.!!$R3 874
8 TraesCS3D01G377400 chr1D 28624692 28626066 1374 False 1921.0 1921 92.2520 1371 2717 1 chr1D.!!$F1 1346
9 TraesCS3D01G377400 chr1D 34586736 34588066 1330 False 1788.0 1788 91.1940 1372 2685 1 chr1D.!!$F2 1313
10 TraesCS3D01G377400 chr4B 156528438 156529829 1391 False 1917.0 1917 91.9050 1365 2726 1 chr4B.!!$F1 1361
11 TraesCS3D01G377400 chr6A 14131018 14132392 1374 False 1847.0 1847 91.2640 1369 2720 1 chr6A.!!$F1 1351
12 TraesCS3D01G377400 chrUn 70550509 70551883 1374 True 1844.0 1844 91.1660 1370 2723 1 chrUn.!!$R1 1353
13 TraesCS3D01G377400 chr5D 398650047 398651420 1373 True 1821.0 1821 90.8890 1369 2723 1 chr5D.!!$R1 1354
14 TraesCS3D01G377400 chr5D 408345894 408347083 1189 False 1674.0 1674 92.2180 1369 2549 1 chr5D.!!$F1 1180
15 TraesCS3D01G377400 chr2A 17107516 17108876 1360 True 1812.0 1812 90.9490 1369 2713 1 chr2A.!!$R1 1344
16 TraesCS3D01G377400 chr1A 584304603 584305989 1386 True 1762.0 1762 89.9930 1372 2727 1 chr1A.!!$R2 1355
17 TraesCS3D01G377400 chr7D 220505215 220506882 1667 False 971.0 1692 90.2600 1365 2720 2 chr7D.!!$F1 1355
18 TraesCS3D01G377400 chr6D 114166884 114167938 1054 False 1339.0 1339 89.5950 1648 2720 1 chr6D.!!$F3 1072
19 TraesCS3D01G377400 chr3A 634184213 634189572 5359 True 558.8 1260 95.0748 1 3389 5 chr3A.!!$R5 3388

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
860 4453 0.381801 CTTGCAGTGAAGCCAAACGT 59.618 50.0 0.0 0.0 0.0 3.99 F
2741 6731 0.031616 GAGAGGTCAGATGGGGAGGT 60.032 60.0 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2798 6788 1.071299 TTGAGCTGCTCGGCTTGAA 59.929 52.632 23.35 9.21 43.2 2.69 R
3847 7843 0.106708 GATCCAATCGGCCAGCAGTA 59.893 55.000 2.24 0.00 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 4.481112 CAAGATGTTGCGGCGGCC 62.481 66.667 14.25 9.54 38.85 6.13
72 73 2.723746 GGCCAAGTATGCATGCCG 59.276 61.111 16.68 1.90 31.55 5.69
73 74 2.120909 GGCCAAGTATGCATGCCGT 61.121 57.895 16.68 6.58 31.55 5.68
327 3920 3.552068 GGTTACAAAGCGGCAGTTTGAAT 60.552 43.478 18.11 3.33 38.13 2.57
375 3968 3.700539 TCCTACCGGTATCGTGAAAATCA 59.299 43.478 16.25 0.00 33.95 2.57
392 3985 1.738099 CAGGCGGCCGTATCATAGC 60.738 63.158 28.70 6.74 0.00 2.97
480 4073 6.762187 CACATAGCCCATATCAGATTCAGATC 59.238 42.308 0.00 0.00 0.00 2.75
482 4075 3.197333 AGCCCATATCAGATTCAGATCCG 59.803 47.826 0.00 0.00 32.44 4.18
487 4080 6.295859 CCCATATCAGATTCAGATCCGGTTAA 60.296 42.308 0.00 0.00 32.44 2.01
491 4084 9.799106 ATATCAGATTCAGATCCGGTTAAATTT 57.201 29.630 0.00 0.00 32.44 1.82
492 4085 7.553881 TCAGATTCAGATCCGGTTAAATTTC 57.446 36.000 0.00 0.00 32.44 2.17
493 4086 6.542370 TCAGATTCAGATCCGGTTAAATTTCC 59.458 38.462 0.00 0.00 32.44 3.13
731 4324 1.214062 CTCAGAGTGCACCGACTCC 59.786 63.158 14.63 0.00 43.04 3.85
806 4399 7.562454 AGGTGAAGTTCGATTTTAGTTTTGA 57.438 32.000 0.00 0.00 0.00 2.69
860 4453 0.381801 CTTGCAGTGAAGCCAAACGT 59.618 50.000 0.00 0.00 0.00 3.99
1035 4628 6.676990 TCAGGAATACATGAGCATATCAGT 57.323 37.500 0.00 0.00 42.53 3.41
1044 4637 4.184649 TGAGCATATCAGTGACCTCCTA 57.815 45.455 0.00 0.00 32.77 2.94
1158 4753 2.354343 GCAGAGCTCTTTGGCCCT 59.646 61.111 15.27 0.00 0.00 5.19
1160 4755 0.746204 GCAGAGCTCTTTGGCCCTAC 60.746 60.000 15.27 0.00 0.00 3.18
1178 4773 2.550487 CGAAGGACGGCAAAATGGA 58.450 52.632 0.00 0.00 38.46 3.41
1250 4845 4.874396 GCCTAGCTTTATTTACACCGACTT 59.126 41.667 0.00 0.00 0.00 3.01
1279 4874 4.100529 CGAAATGGAGATGAACACAATGC 58.899 43.478 0.00 0.00 0.00 3.56
1281 4876 5.471556 AAATGGAGATGAACACAATGCAA 57.528 34.783 0.00 0.00 0.00 4.08
1440 5038 6.961576 TGCATACGGCCACTTTATTAATTAC 58.038 36.000 2.24 0.00 43.89 1.89
1442 5040 7.283580 TGCATACGGCCACTTTATTAATTACTT 59.716 33.333 2.24 0.00 43.89 2.24
1484 5083 5.409826 GTCATACAACAGCAAGACTAAAGCT 59.590 40.000 0.00 0.00 39.63 3.74
1545 5144 0.466124 GAAGGGGCGCTGATAGTCTT 59.534 55.000 7.64 0.84 0.00 3.01
1789 5390 0.906756 CCAGACAGCTTCCTCCTCCA 60.907 60.000 0.00 0.00 0.00 3.86
2008 5609 1.291877 CGTCGCCCAAACAGAGGAAG 61.292 60.000 0.00 0.00 0.00 3.46
2216 5819 4.077184 TAGCCAGCACGAACCGGG 62.077 66.667 6.32 0.00 0.00 5.73
2229 5832 0.033796 AACCGGGGTAGATCGAGTCA 60.034 55.000 6.32 0.00 0.00 3.41
2249 5852 3.771160 GACGACGCCTCCCATGGT 61.771 66.667 11.73 0.00 0.00 3.55
2670 6659 1.423794 AAAGGGAGCCGAGGGTTTGA 61.424 55.000 0.00 0.00 0.00 2.69
2729 6719 2.041405 CAGGGGAGGGGAGAGGTC 60.041 72.222 0.00 0.00 0.00 3.85
2730 6720 2.540910 AGGGGAGGGGAGAGGTCA 60.541 66.667 0.00 0.00 0.00 4.02
2731 6721 2.041405 GGGGAGGGGAGAGGTCAG 60.041 72.222 0.00 0.00 0.00 3.51
2732 6722 2.637640 GGGGAGGGGAGAGGTCAGA 61.638 68.421 0.00 0.00 0.00 3.27
2733 6723 1.629297 GGGAGGGGAGAGGTCAGAT 59.371 63.158 0.00 0.00 0.00 2.90
2734 6724 0.762461 GGGAGGGGAGAGGTCAGATG 60.762 65.000 0.00 0.00 0.00 2.90
2735 6725 0.762461 GGAGGGGAGAGGTCAGATGG 60.762 65.000 0.00 0.00 0.00 3.51
2736 6726 0.762461 GAGGGGAGAGGTCAGATGGG 60.762 65.000 0.00 0.00 0.00 4.00
2737 6727 1.768077 GGGGAGAGGTCAGATGGGG 60.768 68.421 0.00 0.00 0.00 4.96
2738 6728 1.314867 GGGAGAGGTCAGATGGGGA 59.685 63.158 0.00 0.00 0.00 4.81
2739 6729 0.762461 GGGAGAGGTCAGATGGGGAG 60.762 65.000 0.00 0.00 0.00 4.30
2740 6730 0.762461 GGAGAGGTCAGATGGGGAGG 60.762 65.000 0.00 0.00 0.00 4.30
2741 6731 0.031616 GAGAGGTCAGATGGGGAGGT 60.032 60.000 0.00 0.00 0.00 3.85
2742 6732 1.218196 GAGAGGTCAGATGGGGAGGTA 59.782 57.143 0.00 0.00 0.00 3.08
2743 6733 1.869648 AGAGGTCAGATGGGGAGGTAT 59.130 52.381 0.00 0.00 0.00 2.73
2744 6734 1.974236 GAGGTCAGATGGGGAGGTATG 59.026 57.143 0.00 0.00 0.00 2.39
2745 6735 1.295292 AGGTCAGATGGGGAGGTATGT 59.705 52.381 0.00 0.00 0.00 2.29
2798 6788 7.038659 GTGAGCTCTGTGACAACTATTCTTAT 58.961 38.462 16.19 0.00 0.00 1.73
2817 6807 1.230635 TTCAAGCCGAGCAGCTCAAC 61.231 55.000 22.49 12.92 44.11 3.18
2916 6907 6.183360 ACGGATTGGACGACATAACTATAACA 60.183 38.462 0.00 0.00 34.93 2.41
2970 6961 7.646314 CCAAGCTTGTTTCCTAATATCATCAG 58.354 38.462 24.35 0.00 0.00 2.90
2994 6987 3.558006 CACACACGGTTAGTTGTTGATCA 59.442 43.478 0.00 0.00 0.00 2.92
3028 7021 8.747538 TTTCAAAGATAGTATTCTAAAGGGGC 57.252 34.615 0.00 0.00 0.00 5.80
3029 7022 6.838382 TCAAAGATAGTATTCTAAAGGGGCC 58.162 40.000 0.00 0.00 0.00 5.80
3030 7023 6.619852 TCAAAGATAGTATTCTAAAGGGGCCT 59.380 38.462 0.84 0.00 0.00 5.19
3031 7024 6.441088 AAGATAGTATTCTAAAGGGGCCTG 57.559 41.667 0.84 0.00 0.00 4.85
3032 7025 5.477913 AGATAGTATTCTAAAGGGGCCTGT 58.522 41.667 0.84 0.00 0.00 4.00
3035 7028 4.892198 AGTATTCTAAAGGGGCCTGTCTA 58.108 43.478 0.84 0.00 0.00 2.59
3036 7029 4.902448 AGTATTCTAAAGGGGCCTGTCTAG 59.098 45.833 0.84 0.00 0.00 2.43
3052 7045 6.516739 CTGTCTAGGACACATCTAAACTGA 57.483 41.667 0.00 0.00 37.67 3.41
3053 7046 7.106439 CTGTCTAGGACACATCTAAACTGAT 57.894 40.000 0.00 0.00 37.67 2.90
3054 7047 6.867550 TGTCTAGGACACATCTAAACTGATG 58.132 40.000 0.00 0.00 46.61 3.07
3064 7057 6.808008 CATCTAAACTGATGTCCACTTTGT 57.192 37.500 0.00 0.00 39.05 2.83
3065 7058 7.206981 CATCTAAACTGATGTCCACTTTGTT 57.793 36.000 0.00 0.00 39.05 2.83
3066 7059 7.651808 CATCTAAACTGATGTCCACTTTGTTT 58.348 34.615 0.00 0.00 39.05 2.83
3067 7060 7.026631 TCTAAACTGATGTCCACTTTGTTTG 57.973 36.000 0.00 0.00 0.00 2.93
3068 7061 5.659440 AAACTGATGTCCACTTTGTTTGT 57.341 34.783 0.00 0.00 0.00 2.83
3069 7062 4.637483 ACTGATGTCCACTTTGTTTGTG 57.363 40.909 0.00 0.00 35.39 3.33
3129 7122 8.901793 TCTTGTTGCTGCATTATATATTTGTGA 58.098 29.630 1.84 0.00 0.00 3.58
3130 7123 9.177304 CTTGTTGCTGCATTATATATTTGTGAG 57.823 33.333 1.84 0.00 0.00 3.51
3132 7125 8.562052 TGTTGCTGCATTATATATTTGTGAGAG 58.438 33.333 1.84 0.00 0.00 3.20
3133 7126 8.562892 GTTGCTGCATTATATATTTGTGAGAGT 58.437 33.333 1.84 0.00 0.00 3.24
3134 7127 8.681486 TGCTGCATTATATATTTGTGAGAGTT 57.319 30.769 0.00 0.00 0.00 3.01
3135 7128 9.123902 TGCTGCATTATATATTTGTGAGAGTTT 57.876 29.630 0.00 0.00 0.00 2.66
3148 7141 6.801539 TGTGAGAGTTTAAATGTGACATCC 57.198 37.500 0.00 0.00 0.00 3.51
3149 7142 6.533730 TGTGAGAGTTTAAATGTGACATCCT 58.466 36.000 0.00 0.00 0.00 3.24
3150 7143 7.676004 TGTGAGAGTTTAAATGTGACATCCTA 58.324 34.615 0.00 0.00 0.00 2.94
3152 7145 8.999431 GTGAGAGTTTAAATGTGACATCCTAAA 58.001 33.333 0.00 3.84 0.00 1.85
3153 7146 9.567776 TGAGAGTTTAAATGTGACATCCTAAAA 57.432 29.630 11.90 3.60 0.00 1.52
3278 7272 8.723942 ATAGAGACATTTTAGTTGGATGTGTC 57.276 34.615 5.11 5.11 41.64 3.67
3346 7340 8.370493 TCATCTTTTACACTGTCTTTTCTCAG 57.630 34.615 0.00 0.00 37.65 3.35
3384 7378 8.078060 TGAACCATCTTTCTTTTCTTTCCTTT 57.922 30.769 0.00 0.00 0.00 3.11
3396 7392 0.676782 TTTCCTTTAGGCGGCAGCTC 60.677 55.000 13.08 0.00 44.37 4.09
3397 7393 2.514824 CCTTTAGGCGGCAGCTCC 60.515 66.667 13.08 0.00 44.37 4.70
3398 7394 2.268920 CTTTAGGCGGCAGCTCCA 59.731 61.111 13.08 0.00 44.37 3.86
3426 7422 4.008933 GTCTGTGGCGCTGGAGGT 62.009 66.667 7.64 0.00 0.00 3.85
3427 7423 3.241530 TCTGTGGCGCTGGAGGTT 61.242 61.111 7.64 0.00 0.00 3.50
3428 7424 3.052082 CTGTGGCGCTGGAGGTTG 61.052 66.667 7.64 0.00 0.00 3.77
3429 7425 3.832237 CTGTGGCGCTGGAGGTTGT 62.832 63.158 7.64 0.00 0.00 3.32
3430 7426 2.594592 GTGGCGCTGGAGGTTGTT 60.595 61.111 7.64 0.00 0.00 2.83
3431 7427 2.594303 TGGCGCTGGAGGTTGTTG 60.594 61.111 7.64 0.00 0.00 3.33
3432 7428 3.365265 GGCGCTGGAGGTTGTTGG 61.365 66.667 7.64 0.00 0.00 3.77
3433 7429 2.281484 GCGCTGGAGGTTGTTGGA 60.281 61.111 0.00 0.00 0.00 3.53
3434 7430 2.617274 GCGCTGGAGGTTGTTGGAC 61.617 63.158 0.00 0.00 0.00 4.02
3435 7431 1.071471 CGCTGGAGGTTGTTGGACT 59.929 57.895 0.00 0.00 0.00 3.85
3436 7432 1.230635 CGCTGGAGGTTGTTGGACTG 61.231 60.000 0.00 0.00 0.00 3.51
3437 7433 0.890996 GCTGGAGGTTGTTGGACTGG 60.891 60.000 0.00 0.00 0.00 4.00
3438 7434 0.764890 CTGGAGGTTGTTGGACTGGA 59.235 55.000 0.00 0.00 0.00 3.86
3439 7435 0.764890 TGGAGGTTGTTGGACTGGAG 59.235 55.000 0.00 0.00 0.00 3.86
3440 7436 0.036875 GGAGGTTGTTGGACTGGAGG 59.963 60.000 0.00 0.00 0.00 4.30
3441 7437 0.606673 GAGGTTGTTGGACTGGAGGC 60.607 60.000 0.00 0.00 0.00 4.70
3442 7438 1.062488 AGGTTGTTGGACTGGAGGCT 61.062 55.000 0.00 0.00 0.00 4.58
3443 7439 0.690762 GGTTGTTGGACTGGAGGCTA 59.309 55.000 0.00 0.00 0.00 3.93
3444 7440 1.339151 GGTTGTTGGACTGGAGGCTAG 60.339 57.143 0.00 0.00 0.00 3.42
3445 7441 0.324943 TTGTTGGACTGGAGGCTAGC 59.675 55.000 6.04 6.04 0.00 3.42
3446 7442 0.545309 TGTTGGACTGGAGGCTAGCT 60.545 55.000 15.72 0.00 0.00 3.32
3447 7443 0.615850 GTTGGACTGGAGGCTAGCTT 59.384 55.000 15.72 6.94 0.00 3.74
3448 7444 1.831736 GTTGGACTGGAGGCTAGCTTA 59.168 52.381 15.72 0.00 0.00 3.09
3449 7445 2.236395 GTTGGACTGGAGGCTAGCTTAA 59.764 50.000 15.72 0.00 0.00 1.85
3450 7446 2.546899 TGGACTGGAGGCTAGCTTAAA 58.453 47.619 15.72 0.00 0.00 1.52
3451 7447 2.501723 TGGACTGGAGGCTAGCTTAAAG 59.498 50.000 15.72 10.43 0.00 1.85
3452 7448 2.766828 GGACTGGAGGCTAGCTTAAAGA 59.233 50.000 15.72 0.00 0.00 2.52
3453 7449 3.389656 GGACTGGAGGCTAGCTTAAAGAT 59.610 47.826 15.72 0.00 0.00 2.40
3454 7450 4.141597 GGACTGGAGGCTAGCTTAAAGATT 60.142 45.833 15.72 0.00 0.00 2.40
3455 7451 5.070580 GGACTGGAGGCTAGCTTAAAGATTA 59.929 44.000 15.72 0.00 0.00 1.75
3456 7452 6.239743 GGACTGGAGGCTAGCTTAAAGATTAT 60.240 42.308 15.72 0.00 0.00 1.28
3457 7453 7.142995 ACTGGAGGCTAGCTTAAAGATTATT 57.857 36.000 15.72 0.00 0.00 1.40
3458 7454 8.263854 ACTGGAGGCTAGCTTAAAGATTATTA 57.736 34.615 15.72 0.00 0.00 0.98
3459 7455 8.371699 ACTGGAGGCTAGCTTAAAGATTATTAG 58.628 37.037 15.72 0.26 0.00 1.73
3460 7456 8.263854 TGGAGGCTAGCTTAAAGATTATTAGT 57.736 34.615 15.72 0.00 0.00 2.24
3461 7457 8.150945 TGGAGGCTAGCTTAAAGATTATTAGTG 58.849 37.037 15.72 0.00 0.00 2.74
3462 7458 8.368668 GGAGGCTAGCTTAAAGATTATTAGTGA 58.631 37.037 15.72 0.00 0.00 3.41
3463 7459 9.936759 GAGGCTAGCTTAAAGATTATTAGTGAT 57.063 33.333 15.72 0.00 0.00 3.06
3464 7460 9.717942 AGGCTAGCTTAAAGATTATTAGTGATG 57.282 33.333 15.72 0.00 0.00 3.07
3465 7461 8.940952 GGCTAGCTTAAAGATTATTAGTGATGG 58.059 37.037 15.72 0.00 0.00 3.51
3466 7462 9.495572 GCTAGCTTAAAGATTATTAGTGATGGT 57.504 33.333 7.70 0.00 0.00 3.55
3469 7465 9.905713 AGCTTAAAGATTATTAGTGATGGTTCA 57.094 29.630 0.00 0.00 0.00 3.18
3478 7474 9.959721 ATTATTAGTGATGGTTCAAACTAGTGT 57.040 29.630 0.00 0.00 32.48 3.55
3479 7475 9.787435 TTATTAGTGATGGTTCAAACTAGTGTT 57.213 29.630 0.00 0.00 38.16 3.32
3480 7476 8.691661 ATTAGTGATGGTTCAAACTAGTGTTT 57.308 30.769 0.00 0.00 46.20 2.83
3493 7489 6.681729 AACTAGTGTTTGTCCCTATTCAGA 57.318 37.500 0.00 0.00 31.37 3.27
3494 7490 6.287589 ACTAGTGTTTGTCCCTATTCAGAG 57.712 41.667 0.00 0.00 0.00 3.35
3495 7491 3.944087 AGTGTTTGTCCCTATTCAGAGC 58.056 45.455 0.00 0.00 0.00 4.09
3496 7492 3.327757 AGTGTTTGTCCCTATTCAGAGCA 59.672 43.478 0.00 0.00 0.00 4.26
3497 7493 4.018960 AGTGTTTGTCCCTATTCAGAGCAT 60.019 41.667 0.00 0.00 0.00 3.79
3498 7494 4.095483 GTGTTTGTCCCTATTCAGAGCATG 59.905 45.833 0.00 0.00 0.00 4.06
3499 7495 4.263462 TGTTTGTCCCTATTCAGAGCATGT 60.263 41.667 0.00 0.00 0.00 3.21
3500 7496 5.045942 TGTTTGTCCCTATTCAGAGCATGTA 60.046 40.000 0.00 0.00 0.00 2.29
3501 7497 4.944619 TGTCCCTATTCAGAGCATGTAG 57.055 45.455 0.00 0.00 0.00 2.74
3502 7498 4.290093 TGTCCCTATTCAGAGCATGTAGT 58.710 43.478 0.00 0.00 0.00 2.73
3503 7499 4.342378 TGTCCCTATTCAGAGCATGTAGTC 59.658 45.833 0.00 0.00 0.00 2.59
3504 7500 4.342378 GTCCCTATTCAGAGCATGTAGTCA 59.658 45.833 0.00 0.00 0.00 3.41
3505 7501 4.962362 TCCCTATTCAGAGCATGTAGTCAA 59.038 41.667 0.00 0.00 0.00 3.18
3506 7502 5.604231 TCCCTATTCAGAGCATGTAGTCAAT 59.396 40.000 0.00 0.00 0.00 2.57
3507 7503 6.100279 TCCCTATTCAGAGCATGTAGTCAATT 59.900 38.462 0.00 0.00 0.00 2.32
3508 7504 6.769822 CCCTATTCAGAGCATGTAGTCAATTT 59.230 38.462 0.00 0.00 0.00 1.82
3509 7505 7.284034 CCCTATTCAGAGCATGTAGTCAATTTT 59.716 37.037 0.00 0.00 0.00 1.82
3510 7506 8.127327 CCTATTCAGAGCATGTAGTCAATTTTG 58.873 37.037 0.00 0.00 0.00 2.44
3511 7507 6.882610 TTCAGAGCATGTAGTCAATTTTGT 57.117 33.333 0.00 0.00 0.00 2.83
3512 7508 6.245115 TCAGAGCATGTAGTCAATTTTGTG 57.755 37.500 0.00 0.00 0.00 3.33
3513 7509 5.764686 TCAGAGCATGTAGTCAATTTTGTGT 59.235 36.000 0.00 0.00 0.00 3.72
3514 7510 6.934083 TCAGAGCATGTAGTCAATTTTGTGTA 59.066 34.615 0.00 0.00 0.00 2.90
3515 7511 7.443879 TCAGAGCATGTAGTCAATTTTGTGTAA 59.556 33.333 0.00 0.00 0.00 2.41
3516 7512 8.239314 CAGAGCATGTAGTCAATTTTGTGTAAT 58.761 33.333 0.00 0.00 0.00 1.89
3517 7513 8.796475 AGAGCATGTAGTCAATTTTGTGTAATT 58.204 29.630 0.00 0.00 0.00 1.40
3518 7514 9.410556 GAGCATGTAGTCAATTTTGTGTAATTT 57.589 29.630 0.00 0.00 0.00 1.82
3519 7515 9.762933 AGCATGTAGTCAATTTTGTGTAATTTT 57.237 25.926 0.00 0.00 0.00 1.82
3526 7522 9.405587 AGTCAATTTTGTGTAATTTTATCACGG 57.594 29.630 0.00 0.00 35.20 4.94
3527 7523 9.187455 GTCAATTTTGTGTAATTTTATCACGGT 57.813 29.630 0.00 0.00 35.20 4.83
3528 7524 9.751542 TCAATTTTGTGTAATTTTATCACGGTT 57.248 25.926 0.00 0.00 35.20 4.44
3532 7528 6.994868 TGTGTAATTTTATCACGGTTTTGC 57.005 33.333 0.00 0.00 35.20 3.68
3533 7529 6.740110 TGTGTAATTTTATCACGGTTTTGCT 58.260 32.000 0.00 0.00 35.20 3.91
3534 7530 7.872881 TGTGTAATTTTATCACGGTTTTGCTA 58.127 30.769 0.00 0.00 35.20 3.49
3535 7531 8.350722 TGTGTAATTTTATCACGGTTTTGCTAA 58.649 29.630 0.00 0.00 35.20 3.09
3536 7532 9.182933 GTGTAATTTTATCACGGTTTTGCTAAA 57.817 29.630 0.00 0.00 0.00 1.85
3537 7533 9.400638 TGTAATTTTATCACGGTTTTGCTAAAG 57.599 29.630 0.00 0.00 0.00 1.85
3538 7534 6.944557 ATTTTATCACGGTTTTGCTAAAGC 57.055 33.333 11.98 11.98 42.50 3.51
3575 7571 8.201554 TGCTCTAGTTATTGCACAAATTAGAG 57.798 34.615 22.77 22.77 0.00 2.43
3576 7572 7.128976 GCTCTAGTTATTGCACAAATTAGAGC 58.871 38.462 29.22 29.22 43.56 4.09
3577 7573 7.201644 GCTCTAGTTATTGCACAAATTAGAGCA 60.202 37.037 33.05 11.37 46.90 4.26
3578 7574 7.974675 TCTAGTTATTGCACAAATTAGAGCAC 58.025 34.615 7.84 0.00 34.87 4.40
3579 7575 6.573664 AGTTATTGCACAAATTAGAGCACA 57.426 33.333 0.00 0.00 34.87 4.57
3580 7576 7.161773 AGTTATTGCACAAATTAGAGCACAT 57.838 32.000 0.00 0.00 34.87 3.21
3581 7577 7.253422 AGTTATTGCACAAATTAGAGCACATC 58.747 34.615 0.00 0.00 34.87 3.06
3582 7578 5.909621 ATTGCACAAATTAGAGCACATCT 57.090 34.783 0.00 0.00 42.47 2.90
3583 7579 8.397906 GTTATTGCACAAATTAGAGCACATCTA 58.602 33.333 0.00 0.00 39.64 1.98
3584 7580 6.426980 TTGCACAAATTAGAGCACATCTAG 57.573 37.500 0.00 0.00 41.57 2.43
3585 7581 5.733676 TGCACAAATTAGAGCACATCTAGA 58.266 37.500 0.00 0.00 41.57 2.43
3586 7582 6.351711 TGCACAAATTAGAGCACATCTAGAT 58.648 36.000 0.00 0.00 41.57 1.98
3587 7583 6.259387 TGCACAAATTAGAGCACATCTAGATG 59.741 38.462 27.63 27.63 41.57 2.90
3602 7598 7.275888 CATCTAGATGTGCCCTAGATAGATC 57.724 44.000 22.42 0.00 46.55 2.75
3603 7599 5.761205 TCTAGATGTGCCCTAGATAGATCC 58.239 45.833 0.00 0.00 38.08 3.36
3604 7600 4.410481 AGATGTGCCCTAGATAGATCCA 57.590 45.455 0.00 0.00 0.00 3.41
3605 7601 4.957830 AGATGTGCCCTAGATAGATCCAT 58.042 43.478 0.00 0.00 0.00 3.41
3606 7602 5.348833 AGATGTGCCCTAGATAGATCCATT 58.651 41.667 0.00 0.00 0.00 3.16
3607 7603 5.789575 AGATGTGCCCTAGATAGATCCATTT 59.210 40.000 0.00 0.00 0.00 2.32
3608 7604 5.912149 TGTGCCCTAGATAGATCCATTTT 57.088 39.130 0.00 0.00 0.00 1.82
3609 7605 7.459125 AGATGTGCCCTAGATAGATCCATTTTA 59.541 37.037 0.00 0.00 0.00 1.52
3610 7606 7.574021 TGTGCCCTAGATAGATCCATTTTAT 57.426 36.000 0.00 0.00 0.00 1.40
3611 7607 7.988937 TGTGCCCTAGATAGATCCATTTTATT 58.011 34.615 0.00 0.00 0.00 1.40
3612 7608 9.111519 TGTGCCCTAGATAGATCCATTTTATTA 57.888 33.333 0.00 0.00 0.00 0.98
3615 7611 9.566432 GCCCTAGATAGATCCATTTTATTATGG 57.434 37.037 0.00 0.00 45.34 2.74
3631 7627 8.932434 TTTATTATGGTTATATCAGCTTGCCA 57.068 30.769 0.00 0.00 0.00 4.92
3632 7628 8.932434 TTATTATGGTTATATCAGCTTGCCAA 57.068 30.769 0.00 0.00 0.00 4.52
3633 7629 9.532494 TTATTATGGTTATATCAGCTTGCCAAT 57.468 29.630 0.00 0.00 0.00 3.16
3634 7630 5.972107 ATGGTTATATCAGCTTGCCAATC 57.028 39.130 0.00 0.00 0.00 2.67
3635 7631 3.814842 TGGTTATATCAGCTTGCCAATCG 59.185 43.478 0.00 0.00 0.00 3.34
3636 7632 3.189287 GGTTATATCAGCTTGCCAATCGG 59.811 47.826 0.00 0.00 0.00 4.18
3637 7633 2.936919 ATATCAGCTTGCCAATCGGA 57.063 45.000 0.00 0.00 0.00 4.55
3638 7634 2.936919 TATCAGCTTGCCAATCGGAT 57.063 45.000 0.00 0.00 0.00 4.18
3639 7635 1.315690 ATCAGCTTGCCAATCGGATG 58.684 50.000 0.00 0.00 0.00 3.51
3640 7636 0.749091 TCAGCTTGCCAATCGGATGG 60.749 55.000 3.33 3.33 43.70 3.51
3641 7637 0.749091 CAGCTTGCCAATCGGATGGA 60.749 55.000 11.03 0.00 43.54 3.41
3642 7638 0.749454 AGCTTGCCAATCGGATGGAC 60.749 55.000 11.03 3.94 43.54 4.02
3643 7639 0.749454 GCTTGCCAATCGGATGGACT 60.749 55.000 11.03 0.00 43.54 3.85
3644 7640 1.755179 CTTGCCAATCGGATGGACTT 58.245 50.000 11.03 0.00 43.54 3.01
3645 7641 2.094675 CTTGCCAATCGGATGGACTTT 58.905 47.619 11.03 0.00 43.54 2.66
3646 7642 1.750193 TGCCAATCGGATGGACTTTC 58.250 50.000 11.03 0.00 43.54 2.62
3647 7643 1.004161 TGCCAATCGGATGGACTTTCA 59.996 47.619 11.03 0.00 43.54 2.69
3648 7644 2.301346 GCCAATCGGATGGACTTTCAT 58.699 47.619 11.03 0.00 43.54 2.57
3649 7645 2.033801 GCCAATCGGATGGACTTTCATG 59.966 50.000 11.03 0.00 43.54 3.07
3650 7646 3.282021 CCAATCGGATGGACTTTCATGT 58.718 45.455 1.58 0.00 43.54 3.21
3651 7647 3.696051 CCAATCGGATGGACTTTCATGTT 59.304 43.478 1.58 0.00 43.54 2.71
3652 7648 4.201950 CCAATCGGATGGACTTTCATGTTC 60.202 45.833 1.58 0.00 43.54 3.18
3653 7649 2.985896 TCGGATGGACTTTCATGTTCC 58.014 47.619 0.00 0.00 0.00 3.62
3654 7650 2.304470 TCGGATGGACTTTCATGTTCCA 59.696 45.455 9.50 9.50 34.72 3.53
3655 7651 2.420022 CGGATGGACTTTCATGTTCCAC 59.580 50.000 9.34 5.48 32.85 4.02
3656 7652 3.690460 GGATGGACTTTCATGTTCCACT 58.310 45.455 9.34 2.23 32.85 4.00
3657 7653 3.441572 GGATGGACTTTCATGTTCCACTG 59.558 47.826 9.34 0.00 32.85 3.66
3658 7654 3.855255 TGGACTTTCATGTTCCACTGA 57.145 42.857 0.00 0.00 0.00 3.41
3659 7655 3.476552 TGGACTTTCATGTTCCACTGAC 58.523 45.455 0.00 0.00 0.00 3.51
3660 7656 3.136443 TGGACTTTCATGTTCCACTGACT 59.864 43.478 0.00 0.00 0.00 3.41
3661 7657 4.137543 GGACTTTCATGTTCCACTGACTT 58.862 43.478 0.00 0.00 0.00 3.01
3662 7658 4.023707 GGACTTTCATGTTCCACTGACTTG 60.024 45.833 0.00 0.00 0.00 3.16
3663 7659 4.780815 ACTTTCATGTTCCACTGACTTGA 58.219 39.130 0.00 0.00 31.71 3.02
3664 7660 4.576463 ACTTTCATGTTCCACTGACTTGAC 59.424 41.667 0.00 0.00 32.86 3.18
3665 7661 3.836365 TCATGTTCCACTGACTTGACA 57.164 42.857 0.00 0.00 0.00 3.58
3666 7662 4.149511 TCATGTTCCACTGACTTGACAA 57.850 40.909 0.00 0.00 0.00 3.18
3667 7663 4.129380 TCATGTTCCACTGACTTGACAAG 58.871 43.478 13.77 13.77 0.00 3.16
3668 7664 3.627395 TGTTCCACTGACTTGACAAGT 57.373 42.857 20.70 20.70 46.38 3.16
3669 7665 3.950397 TGTTCCACTGACTTGACAAGTT 58.050 40.909 21.42 3.75 43.03 2.66
3670 7666 4.331968 TGTTCCACTGACTTGACAAGTTT 58.668 39.130 21.42 7.19 43.03 2.66
3671 7667 5.492895 TGTTCCACTGACTTGACAAGTTTA 58.507 37.500 21.42 12.87 43.03 2.01
3672 7668 6.119536 TGTTCCACTGACTTGACAAGTTTAT 58.880 36.000 21.42 7.67 43.03 1.40
3673 7669 6.038161 TGTTCCACTGACTTGACAAGTTTATG 59.962 38.462 21.42 17.51 43.03 1.90
3674 7670 5.924356 TCCACTGACTTGACAAGTTTATGA 58.076 37.500 21.42 11.95 43.03 2.15
3675 7671 6.533730 TCCACTGACTTGACAAGTTTATGAT 58.466 36.000 21.42 0.00 43.03 2.45
3676 7672 7.676004 TCCACTGACTTGACAAGTTTATGATA 58.324 34.615 21.42 9.03 43.03 2.15
3677 7673 8.321353 TCCACTGACTTGACAAGTTTATGATAT 58.679 33.333 21.42 0.00 43.03 1.63
3678 7674 8.950210 CCACTGACTTGACAAGTTTATGATATT 58.050 33.333 21.42 0.00 43.03 1.28
3681 7677 9.778993 CTGACTTGACAAGTTTATGATATTTGG 57.221 33.333 21.42 0.00 43.03 3.28
3682 7678 9.295825 TGACTTGACAAGTTTATGATATTTGGT 57.704 29.630 21.42 0.00 43.03 3.67
3691 7687 9.730420 AAGTTTATGATATTTGGTTATTCACGC 57.270 29.630 0.00 0.00 0.00 5.34
3692 7688 8.898761 AGTTTATGATATTTGGTTATTCACGCA 58.101 29.630 0.00 0.00 0.00 5.24
3693 7689 9.509855 GTTTATGATATTTGGTTATTCACGCAA 57.490 29.630 0.00 0.00 0.00 4.85
3695 7691 6.993786 TGATATTTGGTTATTCACGCAAGA 57.006 33.333 0.00 0.00 43.62 3.02
3696 7692 7.384439 TGATATTTGGTTATTCACGCAAGAA 57.616 32.000 0.00 0.00 43.62 2.52
3697 7693 7.247728 TGATATTTGGTTATTCACGCAAGAAC 58.752 34.615 0.00 0.00 43.62 3.01
3698 7694 3.529634 TTGGTTATTCACGCAAGAACG 57.470 42.857 0.62 0.00 37.11 3.95
3699 7695 2.756829 TGGTTATTCACGCAAGAACGA 58.243 42.857 0.00 0.00 37.11 3.85
3700 7696 3.132160 TGGTTATTCACGCAAGAACGAA 58.868 40.909 0.00 0.00 37.11 3.85
3701 7697 3.560481 TGGTTATTCACGCAAGAACGAAA 59.440 39.130 0.00 0.00 37.11 3.46
3702 7698 4.214545 TGGTTATTCACGCAAGAACGAAAT 59.785 37.500 0.00 0.00 37.11 2.17
3703 7699 4.786575 GGTTATTCACGCAAGAACGAAATC 59.213 41.667 0.00 0.00 37.11 2.17
3704 7700 5.379003 GTTATTCACGCAAGAACGAAATCA 58.621 37.500 0.00 0.00 43.62 2.57
3705 7701 3.519908 TTCACGCAAGAACGAAATCAG 57.480 42.857 0.00 0.00 43.62 2.90
3706 7702 2.749776 TCACGCAAGAACGAAATCAGA 58.250 42.857 0.00 0.00 43.62 3.27
3707 7703 3.325870 TCACGCAAGAACGAAATCAGAT 58.674 40.909 0.00 0.00 43.62 2.90
3708 7704 3.745975 TCACGCAAGAACGAAATCAGATT 59.254 39.130 0.00 0.00 43.62 2.40
3709 7705 4.926832 TCACGCAAGAACGAAATCAGATTA 59.073 37.500 0.00 0.00 43.62 1.75
3710 7706 5.062183 TCACGCAAGAACGAAATCAGATTAG 59.938 40.000 0.00 0.00 43.62 1.73
3711 7707 4.929808 ACGCAAGAACGAAATCAGATTAGT 59.070 37.500 0.00 0.00 43.62 2.24
3712 7708 6.034577 CACGCAAGAACGAAATCAGATTAGTA 59.965 38.462 0.00 0.00 43.62 1.82
3713 7709 6.757010 ACGCAAGAACGAAATCAGATTAGTAT 59.243 34.615 0.00 0.00 43.62 2.12
3714 7710 7.277981 ACGCAAGAACGAAATCAGATTAGTATT 59.722 33.333 0.00 0.00 43.62 1.89
3715 7711 8.116753 CGCAAGAACGAAATCAGATTAGTATTT 58.883 33.333 0.00 0.00 43.02 1.40
3716 7712 9.774742 GCAAGAACGAAATCAGATTAGTATTTT 57.225 29.630 0.00 0.00 0.00 1.82
3734 7730 8.888579 AGTATTTTAGAATGTCCTACCGAATG 57.111 34.615 0.00 0.00 0.00 2.67
3735 7731 8.483758 AGTATTTTAGAATGTCCTACCGAATGT 58.516 33.333 0.00 0.00 0.00 2.71
3736 7732 9.106070 GTATTTTAGAATGTCCTACCGAATGTT 57.894 33.333 0.00 0.00 0.00 2.71
3737 7733 6.978343 TTTAGAATGTCCTACCGAATGTTG 57.022 37.500 0.00 0.00 0.00 3.33
3738 7734 3.873910 AGAATGTCCTACCGAATGTTGG 58.126 45.455 0.00 0.00 40.76 3.77
3739 7735 2.038387 ATGTCCTACCGAATGTTGGC 57.962 50.000 0.00 0.00 39.43 4.52
3740 7736 0.981183 TGTCCTACCGAATGTTGGCT 59.019 50.000 0.00 0.00 39.43 4.75
3741 7737 2.181125 TGTCCTACCGAATGTTGGCTA 58.819 47.619 0.00 0.00 39.43 3.93
3742 7738 2.568062 TGTCCTACCGAATGTTGGCTAA 59.432 45.455 0.00 0.00 39.43 3.09
3743 7739 3.199071 TGTCCTACCGAATGTTGGCTAAT 59.801 43.478 0.00 0.00 39.43 1.73
3744 7740 4.196971 GTCCTACCGAATGTTGGCTAATT 58.803 43.478 0.00 0.00 39.43 1.40
3745 7741 4.638865 GTCCTACCGAATGTTGGCTAATTT 59.361 41.667 0.00 0.00 39.43 1.82
3746 7742 5.124936 GTCCTACCGAATGTTGGCTAATTTT 59.875 40.000 0.00 0.00 39.43 1.82
3747 7743 5.712917 TCCTACCGAATGTTGGCTAATTTTT 59.287 36.000 0.00 0.00 39.43 1.94
3828 7824 9.839817 TTAATAATACCCAGTCGATTGAATTCA 57.160 29.630 9.83 3.38 0.00 2.57
3829 7825 7.969536 ATAATACCCAGTCGATTGAATTCAG 57.030 36.000 9.83 0.00 0.00 3.02
3830 7826 3.703001 ACCCAGTCGATTGAATTCAGT 57.297 42.857 9.83 5.59 0.00 3.41
3831 7827 3.600388 ACCCAGTCGATTGAATTCAGTC 58.400 45.455 18.36 18.36 0.00 3.51
3832 7828 3.007940 ACCCAGTCGATTGAATTCAGTCA 59.992 43.478 25.18 13.06 32.87 3.41
3833 7829 4.194640 CCCAGTCGATTGAATTCAGTCAT 58.805 43.478 25.18 10.66 32.87 3.06
3834 7830 4.272018 CCCAGTCGATTGAATTCAGTCATC 59.728 45.833 25.18 16.82 32.87 2.92
3835 7831 4.272018 CCAGTCGATTGAATTCAGTCATCC 59.728 45.833 25.18 14.46 32.87 3.51
3836 7832 5.114780 CAGTCGATTGAATTCAGTCATCCT 58.885 41.667 25.18 16.05 32.87 3.24
3837 7833 6.276091 CAGTCGATTGAATTCAGTCATCCTA 58.724 40.000 25.18 7.63 32.87 2.94
3838 7834 6.199908 CAGTCGATTGAATTCAGTCATCCTAC 59.800 42.308 25.18 16.24 32.87 3.18
3839 7835 5.174035 GTCGATTGAATTCAGTCATCCTACG 59.826 44.000 25.18 13.46 32.87 3.51
3840 7836 4.445718 CGATTGAATTCAGTCATCCTACGG 59.554 45.833 25.18 7.53 32.87 4.02
3841 7837 3.819564 TGAATTCAGTCATCCTACGGG 57.180 47.619 3.38 0.00 0.00 5.28
3842 7838 3.104512 TGAATTCAGTCATCCTACGGGT 58.895 45.455 3.38 0.00 0.00 5.28
3843 7839 3.118775 TGAATTCAGTCATCCTACGGGTG 60.119 47.826 3.38 0.00 0.00 4.61
3844 7840 1.191535 TTCAGTCATCCTACGGGTGG 58.808 55.000 0.00 0.00 0.00 4.61
3845 7841 1.144057 CAGTCATCCTACGGGTGGC 59.856 63.158 0.00 0.00 0.00 5.01
3846 7842 2.064581 AGTCATCCTACGGGTGGCC 61.065 63.158 0.00 0.00 0.00 5.36
3847 7843 2.064581 GTCATCCTACGGGTGGCCT 61.065 63.158 3.32 0.00 0.00 5.19
3848 7844 0.757935 GTCATCCTACGGGTGGCCTA 60.758 60.000 3.32 0.00 0.00 3.93
3849 7845 0.757935 TCATCCTACGGGTGGCCTAC 60.758 60.000 3.32 0.00 0.00 3.18
3850 7846 0.759436 CATCCTACGGGTGGCCTACT 60.759 60.000 3.32 0.00 0.00 2.57
3851 7847 0.759436 ATCCTACGGGTGGCCTACTG 60.759 60.000 3.32 4.20 0.00 2.74
3852 7848 2.499685 CTACGGGTGGCCTACTGC 59.500 66.667 3.32 0.00 40.16 4.40
3853 7849 2.038329 TACGGGTGGCCTACTGCT 59.962 61.111 3.32 0.00 40.92 4.24
3854 7850 2.298158 CTACGGGTGGCCTACTGCTG 62.298 65.000 3.32 0.00 40.92 4.41
3855 7851 4.473520 CGGGTGGCCTACTGCTGG 62.474 72.222 3.32 0.00 40.92 4.85
3861 7857 2.190578 GCCTACTGCTGGCCGATT 59.809 61.111 0.00 0.00 44.32 3.34
3862 7858 2.182842 GCCTACTGCTGGCCGATTG 61.183 63.158 0.00 0.00 44.32 2.67
3863 7859 1.524621 CCTACTGCTGGCCGATTGG 60.525 63.158 0.00 0.00 38.77 3.16
3864 7860 1.522092 CTACTGCTGGCCGATTGGA 59.478 57.895 1.98 0.00 37.49 3.53
3865 7861 0.107456 CTACTGCTGGCCGATTGGAT 59.893 55.000 1.98 0.00 37.49 3.41
3866 7862 0.106708 TACTGCTGGCCGATTGGATC 59.893 55.000 1.98 0.00 37.49 3.36
3867 7863 1.895707 CTGCTGGCCGATTGGATCC 60.896 63.158 4.20 4.20 37.49 3.36
3868 7864 2.192979 GCTGGCCGATTGGATCCA 59.807 61.111 11.44 11.44 37.49 3.41
3869 7865 1.895707 GCTGGCCGATTGGATCCAG 60.896 63.158 15.53 17.48 44.28 3.86
3870 7866 1.895707 CTGGCCGATTGGATCCAGC 60.896 63.158 15.53 14.60 38.28 4.85
3871 7867 2.595754 GGCCGATTGGATCCAGCC 60.596 66.667 22.86 22.86 37.85 4.85
3872 7868 2.974698 GCCGATTGGATCCAGCCG 60.975 66.667 23.12 23.12 37.49 5.52
3873 7869 2.505982 CCGATTGGATCCAGCCGT 59.494 61.111 25.90 12.10 37.49 5.68
3874 7870 1.595382 CCGATTGGATCCAGCCGTC 60.595 63.158 25.90 17.38 37.49 4.79
3875 7871 1.595382 CGATTGGATCCAGCCGTCC 60.595 63.158 22.27 7.88 35.02 4.79
3876 7872 1.832912 GATTGGATCCAGCCGTCCT 59.167 57.895 15.53 0.00 35.49 3.85
3877 7873 1.048601 GATTGGATCCAGCCGTCCTA 58.951 55.000 15.53 0.00 35.49 2.94
3878 7874 0.759346 ATTGGATCCAGCCGTCCTAC 59.241 55.000 15.53 0.00 35.49 3.18
3879 7875 0.325296 TTGGATCCAGCCGTCCTACT 60.325 55.000 15.53 0.00 35.49 2.57
3880 7876 1.043116 TGGATCCAGCCGTCCTACTG 61.043 60.000 11.44 0.00 35.49 2.74
3883 7879 2.579201 CCAGCCGTCCTACTGGTG 59.421 66.667 0.79 0.00 46.95 4.17
3884 7880 2.579201 CAGCCGTCCTACTGGTGG 59.421 66.667 0.00 0.00 34.57 4.61
3886 7882 4.468689 GCCGTCCTACTGGTGGCC 62.469 72.222 0.00 0.00 44.39 5.36
3887 7883 4.143333 CCGTCCTACTGGTGGCCG 62.143 72.222 0.00 0.00 34.23 6.13
3888 7884 3.066190 CGTCCTACTGGTGGCCGA 61.066 66.667 0.00 0.00 34.23 5.54
3889 7885 2.423898 CGTCCTACTGGTGGCCGAT 61.424 63.158 0.00 0.00 34.23 4.18
3890 7886 1.905512 GTCCTACTGGTGGCCGATT 59.094 57.895 0.00 0.00 34.23 3.34
3891 7887 0.462047 GTCCTACTGGTGGCCGATTG 60.462 60.000 0.00 0.00 34.23 2.67
3892 7888 1.153168 CCTACTGGTGGCCGATTGG 60.153 63.158 0.00 0.00 38.77 3.16
3923 7919 4.467084 GACTGCCGGCCGATTGGA 62.467 66.667 30.73 10.78 37.49 3.53
3924 7920 3.757248 GACTGCCGGCCGATTGGAT 62.757 63.158 30.73 6.50 37.49 3.41
3925 7921 2.974698 CTGCCGGCCGATTGGATC 60.975 66.667 30.73 6.72 37.49 3.36
3926 7922 4.562425 TGCCGGCCGATTGGATCC 62.562 66.667 30.73 4.20 37.49 3.36
3927 7923 4.562425 GCCGGCCGATTGGATCCA 62.562 66.667 30.73 11.44 37.49 3.41
3928 7924 2.281070 CCGGCCGATTGGATCCAG 60.281 66.667 30.73 4.30 37.49 3.86
3929 7925 2.505982 CGGCCGATTGGATCCAGT 59.494 61.111 24.07 12.79 37.49 4.00
3930 7926 1.595382 CGGCCGATTGGATCCAGTC 60.595 63.158 24.07 23.82 37.49 3.51
3934 7930 4.464262 GATTGGATCCAGTCGGCC 57.536 61.111 20.21 0.00 0.00 6.13
3935 7931 1.227973 GATTGGATCCAGTCGGCCC 60.228 63.158 20.21 0.00 0.00 5.80
3936 7932 1.983119 GATTGGATCCAGTCGGCCCA 61.983 60.000 20.21 1.03 34.26 5.36
3937 7933 2.270874 ATTGGATCCAGTCGGCCCAC 62.271 60.000 15.53 0.00 35.35 4.61
3938 7934 3.083997 GGATCCAGTCGGCCCACT 61.084 66.667 6.95 0.00 0.00 4.00
3939 7935 2.187946 GATCCAGTCGGCCCACTG 59.812 66.667 22.43 22.43 43.13 3.66
3940 7936 4.101448 ATCCAGTCGGCCCACTGC 62.101 66.667 23.78 0.00 42.29 4.40
3950 7946 3.136123 CCCACTGCTGGCCGATTG 61.136 66.667 0.00 0.00 36.00 2.67
3951 7947 3.136123 CCACTGCTGGCCGATTGG 61.136 66.667 0.00 0.00 38.77 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 1.372582 ACTGACGGCATGCATACTTG 58.627 50.000 21.36 7.13 0.00 3.16
72 73 4.208460 TCGATCAACGAGTTTTCAACTGAC 59.792 41.667 0.00 0.00 46.45 3.51
73 74 4.364860 TCGATCAACGAGTTTTCAACTGA 58.635 39.130 0.00 0.00 46.45 3.41
122 3706 3.782244 GCAGGCTCGACGCAACAG 61.782 66.667 8.71 0.00 41.67 3.16
327 3920 5.410132 CAGATGCAATTTCCAAAGCAATTGA 59.590 36.000 10.34 0.00 41.18 2.57
375 3968 2.657237 GCTATGATACGGCCGCCT 59.343 61.111 28.58 13.41 0.00 5.52
392 3985 4.933330 TCGAGAGATTGAATTCGTAAGGG 58.067 43.478 0.04 0.00 34.83 3.95
480 4073 2.232696 CTGTTGGGGGAAATTTAACCGG 59.767 50.000 0.00 0.00 0.00 5.28
482 4075 2.027561 GGCTGTTGGGGGAAATTTAACC 60.028 50.000 0.00 0.00 0.00 2.85
487 4080 1.278537 CATGGCTGTTGGGGGAAATT 58.721 50.000 0.00 0.00 0.00 1.82
491 4084 1.508667 ATGACATGGCTGTTGGGGGA 61.509 55.000 0.00 0.00 35.14 4.81
492 4085 0.615544 AATGACATGGCTGTTGGGGG 60.616 55.000 0.00 0.00 35.14 5.40
493 4086 1.066716 CAAATGACATGGCTGTTGGGG 60.067 52.381 0.00 0.00 35.14 4.96
731 4324 6.750148 ACTAGGCGTAAAAAGAGAGATATGG 58.250 40.000 0.00 0.00 0.00 2.74
806 4399 1.884579 CTTGCTTCTCATGCTGGTTGT 59.115 47.619 0.00 0.00 0.00 3.32
860 4453 1.376466 GTGCTTGGGCTGGAGAAGA 59.624 57.895 0.00 0.00 39.59 2.87
1035 4628 1.431633 TCCTTGGACAGTAGGAGGTCA 59.568 52.381 0.00 0.00 35.66 4.02
1044 4637 2.529744 GGTGCCCTCCTTGGACAGT 61.530 63.158 0.00 0.00 38.35 3.55
1158 4753 1.002201 TCCATTTTGCCGTCCTTCGTA 59.998 47.619 0.00 0.00 37.94 3.43
1160 4755 0.878416 TTCCATTTTGCCGTCCTTCG 59.122 50.000 0.00 0.00 39.52 3.79
1178 4773 9.334947 CCATATCTTTGATCTGTATGACACTTT 57.665 33.333 0.00 0.00 0.00 2.66
1229 4824 7.254017 GCAGTAAGTCGGTGTAAATAAAGCTAG 60.254 40.741 0.00 0.00 0.00 3.42
1250 4845 2.115427 TCATCTCCATTTCGGGCAGTA 58.885 47.619 0.00 0.00 34.36 2.74
1279 4874 4.141959 TGTTTCTTGGGCTTTTCCTTCTTG 60.142 41.667 0.00 0.00 34.39 3.02
1281 4876 3.642141 TGTTTCTTGGGCTTTTCCTTCT 58.358 40.909 0.00 0.00 34.39 2.85
1451 5049 6.989759 TCTTGCTGTTGTATGACTTTGTAAGA 59.010 34.615 0.00 0.00 0.00 2.10
1484 5083 3.645884 GACAGTTGTTGCTTAGACGGTA 58.354 45.455 0.00 0.00 0.00 4.02
1545 5144 4.523083 GATGTCTGTTTGGTATTAGGCCA 58.477 43.478 5.01 0.00 0.00 5.36
1789 5390 3.893763 CGGAGATGGACTCGCGCT 61.894 66.667 5.56 0.00 45.76 5.92
1948 5549 3.302347 CTTCCTGAAGGCGTCGGCT 62.302 63.158 16.63 16.63 41.24 5.52
2054 5657 2.743718 CTGGAGGCTTCGGTGTGT 59.256 61.111 0.00 0.00 0.00 3.72
2216 5819 2.540931 GTCGTCTCTGACTCGATCTACC 59.459 54.545 0.00 0.00 35.95 3.18
2229 5832 2.043852 ATGGGAGGCGTCGTCTCT 60.044 61.111 24.87 3.99 34.33 3.10
2249 5852 3.857038 GATGGCCGCCCGGAGTTA 61.857 66.667 11.48 0.00 37.50 2.24
2646 6620 4.162690 CTCGGCTCCCTTTCCCGG 62.163 72.222 0.00 0.00 42.18 5.73
2652 6635 1.846124 TCAAACCCTCGGCTCCCTT 60.846 57.895 0.00 0.00 0.00 3.95
2729 6719 3.041211 TCTTCACATACCTCCCCATCTG 58.959 50.000 0.00 0.00 0.00 2.90
2730 6720 3.051803 TCTCTTCACATACCTCCCCATCT 60.052 47.826 0.00 0.00 0.00 2.90
2731 6721 3.309296 TCTCTTCACATACCTCCCCATC 58.691 50.000 0.00 0.00 0.00 3.51
2732 6722 3.312890 CTCTCTTCACATACCTCCCCAT 58.687 50.000 0.00 0.00 0.00 4.00
2733 6723 2.626950 CCTCTCTTCACATACCTCCCCA 60.627 54.545 0.00 0.00 0.00 4.96
2734 6724 2.043227 CCTCTCTTCACATACCTCCCC 58.957 57.143 0.00 0.00 0.00 4.81
2735 6725 2.753247 ACCTCTCTTCACATACCTCCC 58.247 52.381 0.00 0.00 0.00 4.30
2736 6726 3.515901 ACAACCTCTCTTCACATACCTCC 59.484 47.826 0.00 0.00 0.00 4.30
2737 6727 4.021016 ACACAACCTCTCTTCACATACCTC 60.021 45.833 0.00 0.00 0.00 3.85
2738 6728 3.904339 ACACAACCTCTCTTCACATACCT 59.096 43.478 0.00 0.00 0.00 3.08
2739 6729 3.997021 CACACAACCTCTCTTCACATACC 59.003 47.826 0.00 0.00 0.00 2.73
2740 6730 4.883083 TCACACAACCTCTCTTCACATAC 58.117 43.478 0.00 0.00 0.00 2.39
2741 6731 5.163353 TGTTCACACAACCTCTCTTCACATA 60.163 40.000 0.00 0.00 0.00 2.29
2742 6732 4.130118 GTTCACACAACCTCTCTTCACAT 58.870 43.478 0.00 0.00 0.00 3.21
2743 6733 3.055458 TGTTCACACAACCTCTCTTCACA 60.055 43.478 0.00 0.00 0.00 3.58
2744 6734 3.531538 TGTTCACACAACCTCTCTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
2745 6735 3.904800 TGTTCACACAACCTCTCTTCA 57.095 42.857 0.00 0.00 0.00 3.02
2798 6788 1.071299 TTGAGCTGCTCGGCTTGAA 59.929 52.632 23.35 9.21 43.20 2.69
2817 6807 2.597455 ACCCCTTTCAATCCACAACAG 58.403 47.619 0.00 0.00 0.00 3.16
2970 6961 2.931325 TCAACAACTAACCGTGTGTGTC 59.069 45.455 0.00 0.00 0.00 3.67
3022 7015 0.910088 GTGTCCTAGACAGGCCCCTT 60.910 60.000 0.00 0.00 43.57 3.95
3025 7018 0.466124 GATGTGTCCTAGACAGGCCC 59.534 60.000 0.00 0.00 43.57 5.80
3026 7019 1.490574 AGATGTGTCCTAGACAGGCC 58.509 55.000 0.00 0.00 43.57 5.19
3028 7021 5.419155 TCAGTTTAGATGTGTCCTAGACAGG 59.581 44.000 0.00 0.00 43.57 4.00
3029 7022 6.516739 TCAGTTTAGATGTGTCCTAGACAG 57.483 41.667 0.00 0.00 43.57 3.51
3030 7023 6.867550 CATCAGTTTAGATGTGTCCTAGACA 58.132 40.000 0.00 0.00 40.35 3.41
3041 7034 6.808008 ACAAAGTGGACATCAGTTTAGATG 57.192 37.500 2.62 2.62 44.63 2.90
3042 7035 7.285401 ACAAACAAAGTGGACATCAGTTTAGAT 59.715 33.333 0.00 0.00 44.63 1.98
3043 7036 6.601613 ACAAACAAAGTGGACATCAGTTTAGA 59.398 34.615 0.00 0.00 44.63 2.10
3044 7037 6.692681 CACAAACAAAGTGGACATCAGTTTAG 59.307 38.462 0.00 0.00 44.63 1.85
3045 7038 6.559810 CACAAACAAAGTGGACATCAGTTTA 58.440 36.000 0.00 0.00 44.63 2.01
3046 7039 5.410067 CACAAACAAAGTGGACATCAGTTT 58.590 37.500 0.00 0.00 46.66 2.66
3047 7040 4.997565 CACAAACAAAGTGGACATCAGTT 58.002 39.130 0.00 0.00 40.52 3.16
3048 7041 4.637483 CACAAACAAAGTGGACATCAGT 57.363 40.909 0.00 0.00 33.43 3.41
3103 7096 8.901793 TCACAAATATATAATGCAGCAACAAGA 58.098 29.630 0.00 0.00 0.00 3.02
3104 7097 9.177304 CTCACAAATATATAATGCAGCAACAAG 57.823 33.333 0.00 0.00 0.00 3.16
3107 7100 8.562892 ACTCTCACAAATATATAATGCAGCAAC 58.437 33.333 0.00 0.00 0.00 4.17
3108 7101 8.681486 ACTCTCACAAATATATAATGCAGCAA 57.319 30.769 0.00 0.00 0.00 3.91
3109 7102 8.681486 AACTCTCACAAATATATAATGCAGCA 57.319 30.769 0.00 0.00 0.00 4.41
3122 7115 8.299570 GGATGTCACATTTAAACTCTCACAAAT 58.700 33.333 0.00 0.00 0.00 2.32
3124 7117 6.998074 AGGATGTCACATTTAAACTCTCACAA 59.002 34.615 0.00 0.00 0.00 3.33
3125 7118 6.533730 AGGATGTCACATTTAAACTCTCACA 58.466 36.000 0.00 0.00 0.00 3.58
3127 7120 9.567776 TTTTAGGATGTCACATTTAAACTCTCA 57.432 29.630 0.00 0.00 0.00 3.27
3184 7177 9.817809 CTGCAACCTATAAACATAGACTTTAGA 57.182 33.333 0.00 0.00 0.00 2.10
3185 7178 9.601217 ACTGCAACCTATAAACATAGACTTTAG 57.399 33.333 0.00 0.00 0.00 1.85
3186 7179 9.595823 GACTGCAACCTATAAACATAGACTTTA 57.404 33.333 0.00 0.00 0.00 1.85
3187 7180 8.322091 AGACTGCAACCTATAAACATAGACTTT 58.678 33.333 0.00 0.00 0.00 2.66
3188 7181 7.766278 CAGACTGCAACCTATAAACATAGACTT 59.234 37.037 0.00 0.00 0.00 3.01
3189 7182 7.268586 CAGACTGCAACCTATAAACATAGACT 58.731 38.462 0.00 0.00 0.00 3.24
3190 7183 6.480320 CCAGACTGCAACCTATAAACATAGAC 59.520 42.308 0.00 0.00 0.00 2.59
3278 7272 3.426695 GGAATCAAGGAAAGATGCACACG 60.427 47.826 0.00 0.00 0.00 4.49
3346 7340 6.963049 AAGATGGTTCATGTCGTAACTTAC 57.037 37.500 0.00 0.00 0.00 2.34
3384 7378 2.043349 TACTGGAGCTGCCGCCTA 60.043 61.111 1.53 0.00 40.66 3.93
3411 7407 3.052082 CAACCTCCAGCGCCACAG 61.052 66.667 2.29 0.00 0.00 3.66
3415 7411 3.365265 CCAACAACCTCCAGCGCC 61.365 66.667 2.29 0.00 0.00 6.53
3426 7422 0.324943 GCTAGCCTCCAGTCCAACAA 59.675 55.000 2.29 0.00 0.00 2.83
3427 7423 0.545309 AGCTAGCCTCCAGTCCAACA 60.545 55.000 12.13 0.00 0.00 3.33
3428 7424 0.615850 AAGCTAGCCTCCAGTCCAAC 59.384 55.000 12.13 0.00 0.00 3.77
3429 7425 2.247699 TAAGCTAGCCTCCAGTCCAA 57.752 50.000 12.13 0.00 0.00 3.53
3430 7426 2.247699 TTAAGCTAGCCTCCAGTCCA 57.752 50.000 12.13 0.00 0.00 4.02
3431 7427 2.766828 TCTTTAAGCTAGCCTCCAGTCC 59.233 50.000 12.13 0.00 0.00 3.85
3432 7428 4.681074 ATCTTTAAGCTAGCCTCCAGTC 57.319 45.455 12.13 0.00 0.00 3.51
3433 7429 6.755542 ATAATCTTTAAGCTAGCCTCCAGT 57.244 37.500 12.13 0.00 0.00 4.00
3434 7430 8.371699 ACTAATAATCTTTAAGCTAGCCTCCAG 58.628 37.037 12.13 3.10 0.00 3.86
3435 7431 8.150945 CACTAATAATCTTTAAGCTAGCCTCCA 58.849 37.037 12.13 0.00 0.00 3.86
3436 7432 8.368668 TCACTAATAATCTTTAAGCTAGCCTCC 58.631 37.037 12.13 0.00 0.00 4.30
3437 7433 9.936759 ATCACTAATAATCTTTAAGCTAGCCTC 57.063 33.333 12.13 0.00 0.00 4.70
3438 7434 9.717942 CATCACTAATAATCTTTAAGCTAGCCT 57.282 33.333 12.13 0.00 0.00 4.58
3439 7435 8.940952 CCATCACTAATAATCTTTAAGCTAGCC 58.059 37.037 12.13 0.00 0.00 3.93
3440 7436 9.495572 ACCATCACTAATAATCTTTAAGCTAGC 57.504 33.333 6.62 6.62 0.00 3.42
3443 7439 9.905713 TGAACCATCACTAATAATCTTTAAGCT 57.094 29.630 0.00 0.00 0.00 3.74
3452 7448 9.959721 ACACTAGTTTGAACCATCACTAATAAT 57.040 29.630 0.00 0.00 34.61 1.28
3453 7449 9.787435 AACACTAGTTTGAACCATCACTAATAA 57.213 29.630 0.00 0.00 34.61 1.40
3454 7450 9.787435 AAACACTAGTTTGAACCATCACTAATA 57.213 29.630 0.00 0.00 45.79 0.98
3455 7451 8.691661 AAACACTAGTTTGAACCATCACTAAT 57.308 30.769 0.00 0.00 45.79 1.73
3470 7466 6.681729 TCTGAATAGGGACAAACACTAGTT 57.318 37.500 0.00 0.00 37.96 2.24
3471 7467 5.337652 GCTCTGAATAGGGACAAACACTAGT 60.338 44.000 0.00 0.00 37.96 2.57
3472 7468 5.112686 GCTCTGAATAGGGACAAACACTAG 58.887 45.833 0.00 0.00 37.96 2.57
3473 7469 4.530553 TGCTCTGAATAGGGACAAACACTA 59.469 41.667 0.00 0.00 38.98 2.74
3474 7470 3.327757 TGCTCTGAATAGGGACAAACACT 59.672 43.478 0.00 0.00 35.78 3.55
3475 7471 3.674997 TGCTCTGAATAGGGACAAACAC 58.325 45.455 0.00 0.00 0.00 3.32
3476 7472 4.263462 ACATGCTCTGAATAGGGACAAACA 60.263 41.667 0.00 0.00 0.00 2.83
3477 7473 4.265073 ACATGCTCTGAATAGGGACAAAC 58.735 43.478 0.00 0.00 0.00 2.93
3478 7474 4.574674 ACATGCTCTGAATAGGGACAAA 57.425 40.909 0.00 0.00 0.00 2.83
3479 7475 4.716784 ACTACATGCTCTGAATAGGGACAA 59.283 41.667 0.00 0.00 0.00 3.18
3480 7476 4.290093 ACTACATGCTCTGAATAGGGACA 58.710 43.478 0.00 0.00 0.00 4.02
3481 7477 4.342378 TGACTACATGCTCTGAATAGGGAC 59.658 45.833 0.00 0.00 0.00 4.46
3482 7478 4.546674 TGACTACATGCTCTGAATAGGGA 58.453 43.478 0.00 0.00 0.00 4.20
3483 7479 4.944619 TGACTACATGCTCTGAATAGGG 57.055 45.455 0.00 0.00 0.00 3.53
3484 7480 7.798596 AAATTGACTACATGCTCTGAATAGG 57.201 36.000 0.00 0.00 0.00 2.57
3485 7481 8.671921 ACAAAATTGACTACATGCTCTGAATAG 58.328 33.333 0.00 0.00 0.00 1.73
3486 7482 8.453320 CACAAAATTGACTACATGCTCTGAATA 58.547 33.333 0.00 0.00 0.00 1.75
3487 7483 7.040201 ACACAAAATTGACTACATGCTCTGAAT 60.040 33.333 0.00 0.00 0.00 2.57
3488 7484 6.262944 ACACAAAATTGACTACATGCTCTGAA 59.737 34.615 0.00 0.00 0.00 3.02
3489 7485 5.764686 ACACAAAATTGACTACATGCTCTGA 59.235 36.000 0.00 0.00 0.00 3.27
3490 7486 6.005583 ACACAAAATTGACTACATGCTCTG 57.994 37.500 0.00 0.00 0.00 3.35
3491 7487 7.744087 TTACACAAAATTGACTACATGCTCT 57.256 32.000 0.00 0.00 0.00 4.09
3492 7488 8.970691 AATTACACAAAATTGACTACATGCTC 57.029 30.769 0.00 0.00 0.00 4.26
3493 7489 9.762933 AAAATTACACAAAATTGACTACATGCT 57.237 25.926 0.00 0.00 0.00 3.79
3500 7496 9.405587 CCGTGATAAAATTACACAAAATTGACT 57.594 29.630 0.00 0.00 34.69 3.41
3501 7497 9.187455 ACCGTGATAAAATTACACAAAATTGAC 57.813 29.630 0.00 0.00 34.69 3.18
3502 7498 9.751542 AACCGTGATAAAATTACACAAAATTGA 57.248 25.926 0.00 0.00 34.69 2.57
3506 7502 8.328864 GCAAAACCGTGATAAAATTACACAAAA 58.671 29.630 0.00 0.00 34.69 2.44
3507 7503 7.707035 AGCAAAACCGTGATAAAATTACACAAA 59.293 29.630 0.00 0.00 34.69 2.83
3508 7504 7.203910 AGCAAAACCGTGATAAAATTACACAA 58.796 30.769 0.00 0.00 34.69 3.33
3509 7505 6.740110 AGCAAAACCGTGATAAAATTACACA 58.260 32.000 0.00 0.00 34.69 3.72
3510 7506 8.730970 TTAGCAAAACCGTGATAAAATTACAC 57.269 30.769 0.00 0.00 0.00 2.90
3511 7507 9.400638 CTTTAGCAAAACCGTGATAAAATTACA 57.599 29.630 0.00 0.00 38.50 2.41
3512 7508 8.370321 GCTTTAGCAAAACCGTGATAAAATTAC 58.630 33.333 0.00 0.00 38.50 1.89
3513 7509 8.455598 GCTTTAGCAAAACCGTGATAAAATTA 57.544 30.769 0.00 0.00 38.50 1.40
3514 7510 7.346208 GCTTTAGCAAAACCGTGATAAAATT 57.654 32.000 0.00 0.00 38.50 1.82
3515 7511 6.944557 GCTTTAGCAAAACCGTGATAAAAT 57.055 33.333 0.00 0.00 38.50 1.82
3550 7546 7.201644 GCTCTAATTTGTGCAATAACTAGAGCA 60.202 37.037 28.99 5.29 46.90 4.26
3551 7547 7.128976 GCTCTAATTTGTGCAATAACTAGAGC 58.871 38.462 24.42 24.42 43.56 4.09
3552 7548 8.119226 GTGCTCTAATTTGTGCAATAACTAGAG 58.881 37.037 16.17 16.97 38.02 2.43
3553 7549 7.606073 TGTGCTCTAATTTGTGCAATAACTAGA 59.394 33.333 16.17 0.00 38.02 2.43
3554 7550 7.751732 TGTGCTCTAATTTGTGCAATAACTAG 58.248 34.615 16.17 0.00 38.02 2.57
3555 7551 7.680442 TGTGCTCTAATTTGTGCAATAACTA 57.320 32.000 16.17 0.34 38.02 2.24
3556 7552 6.573664 TGTGCTCTAATTTGTGCAATAACT 57.426 33.333 16.17 0.00 38.02 2.24
3557 7553 7.253422 AGATGTGCTCTAATTTGTGCAATAAC 58.747 34.615 16.17 8.94 38.02 1.89
3558 7554 7.395190 AGATGTGCTCTAATTTGTGCAATAA 57.605 32.000 16.17 7.62 38.02 1.40
3559 7555 7.986889 TCTAGATGTGCTCTAATTTGTGCAATA 59.013 33.333 16.17 10.19 38.02 1.90
3560 7556 5.909621 AGATGTGCTCTAATTTGTGCAAT 57.090 34.783 16.17 12.27 38.02 3.56
3561 7557 6.172630 TCTAGATGTGCTCTAATTTGTGCAA 58.827 36.000 16.17 8.88 38.02 4.08
3562 7558 5.733676 TCTAGATGTGCTCTAATTTGTGCA 58.266 37.500 11.65 11.65 36.02 4.57
3563 7559 6.656945 CATCTAGATGTGCTCTAATTTGTGC 58.343 40.000 22.42 6.94 36.02 4.57
3580 7576 5.254032 TGGATCTATCTAGGGCACATCTAGA 59.746 44.000 0.00 0.00 44.78 2.43
3581 7577 5.514169 TGGATCTATCTAGGGCACATCTAG 58.486 45.833 0.00 0.00 36.46 2.43
3582 7578 5.536497 TGGATCTATCTAGGGCACATCTA 57.464 43.478 0.00 0.00 0.00 1.98
3583 7579 4.410481 TGGATCTATCTAGGGCACATCT 57.590 45.455 0.00 0.00 0.00 2.90
3584 7580 5.690464 AATGGATCTATCTAGGGCACATC 57.310 43.478 0.00 0.00 0.00 3.06
3585 7581 6.460103 AAAATGGATCTATCTAGGGCACAT 57.540 37.500 0.00 0.00 0.00 3.21
3586 7582 5.912149 AAAATGGATCTATCTAGGGCACA 57.088 39.130 0.00 0.00 0.00 4.57
3605 7601 9.360901 TGGCAAGCTGATATAACCATAATAAAA 57.639 29.630 0.00 0.00 0.00 1.52
3606 7602 8.932434 TGGCAAGCTGATATAACCATAATAAA 57.068 30.769 0.00 0.00 0.00 1.40
3607 7603 8.932434 TTGGCAAGCTGATATAACCATAATAA 57.068 30.769 0.00 0.00 0.00 1.40
3608 7604 9.177608 GATTGGCAAGCTGATATAACCATAATA 57.822 33.333 8.48 0.00 0.00 0.98
3609 7605 7.148188 CGATTGGCAAGCTGATATAACCATAAT 60.148 37.037 14.16 0.00 0.00 1.28
3610 7606 6.149308 CGATTGGCAAGCTGATATAACCATAA 59.851 38.462 14.16 0.00 0.00 1.90
3611 7607 5.643348 CGATTGGCAAGCTGATATAACCATA 59.357 40.000 14.16 0.00 0.00 2.74
3612 7608 4.456911 CGATTGGCAAGCTGATATAACCAT 59.543 41.667 14.16 0.00 0.00 3.55
3613 7609 3.814842 CGATTGGCAAGCTGATATAACCA 59.185 43.478 14.16 0.00 0.00 3.67
3614 7610 3.189287 CCGATTGGCAAGCTGATATAACC 59.811 47.826 14.16 0.00 0.00 2.85
3615 7611 4.065088 TCCGATTGGCAAGCTGATATAAC 58.935 43.478 14.16 0.00 34.14 1.89
3616 7612 4.350368 TCCGATTGGCAAGCTGATATAA 57.650 40.909 14.16 0.00 34.14 0.98
3617 7613 4.256110 CATCCGATTGGCAAGCTGATATA 58.744 43.478 19.52 0.00 34.14 0.86
3618 7614 2.936919 TCCGATTGGCAAGCTGATAT 57.063 45.000 14.16 0.00 34.14 1.63
3619 7615 2.497138 CATCCGATTGGCAAGCTGATA 58.503 47.619 19.52 0.89 34.14 2.15
3620 7616 1.315690 CATCCGATTGGCAAGCTGAT 58.684 50.000 15.29 15.29 34.14 2.90
3621 7617 0.749091 CCATCCGATTGGCAAGCTGA 60.749 55.000 14.16 12.98 34.14 4.26
3622 7618 0.749091 TCCATCCGATTGGCAAGCTG 60.749 55.000 14.16 7.28 36.66 4.24
3623 7619 0.749454 GTCCATCCGATTGGCAAGCT 60.749 55.000 14.16 0.00 36.66 3.74
3624 7620 0.749454 AGTCCATCCGATTGGCAAGC 60.749 55.000 5.19 5.19 36.66 4.01
3625 7621 1.755179 AAGTCCATCCGATTGGCAAG 58.245 50.000 5.96 0.00 36.66 4.01
3626 7622 2.091541 GAAAGTCCATCCGATTGGCAA 58.908 47.619 0.68 0.68 36.66 4.52
3627 7623 1.004161 TGAAAGTCCATCCGATTGGCA 59.996 47.619 0.00 0.00 36.66 4.92
3628 7624 1.750193 TGAAAGTCCATCCGATTGGC 58.250 50.000 0.00 0.00 36.66 4.52
3629 7625 3.282021 ACATGAAAGTCCATCCGATTGG 58.718 45.455 0.00 0.00 38.18 3.16
3630 7626 4.201950 GGAACATGAAAGTCCATCCGATTG 60.202 45.833 0.00 0.00 0.00 2.67
3631 7627 3.947834 GGAACATGAAAGTCCATCCGATT 59.052 43.478 0.00 0.00 0.00 3.34
3632 7628 3.054434 TGGAACATGAAAGTCCATCCGAT 60.054 43.478 0.00 0.00 0.00 4.18
3633 7629 2.304470 TGGAACATGAAAGTCCATCCGA 59.696 45.455 0.00 0.00 0.00 4.55
3634 7630 2.420022 GTGGAACATGAAAGTCCATCCG 59.580 50.000 0.00 0.00 44.52 4.18
3635 7631 3.441572 CAGTGGAACATGAAAGTCCATCC 59.558 47.826 0.00 0.00 44.52 3.51
3636 7632 4.154918 GTCAGTGGAACATGAAAGTCCATC 59.845 45.833 0.00 2.68 44.52 3.51
3637 7633 4.074970 GTCAGTGGAACATGAAAGTCCAT 58.925 43.478 0.00 0.00 44.52 3.41
3638 7634 3.136443 AGTCAGTGGAACATGAAAGTCCA 59.864 43.478 0.00 3.88 44.52 4.02
3639 7635 3.744660 AGTCAGTGGAACATGAAAGTCC 58.255 45.455 0.00 1.01 44.52 3.85
3640 7636 4.816385 TCAAGTCAGTGGAACATGAAAGTC 59.184 41.667 0.00 0.00 44.52 3.01
3641 7637 4.576463 GTCAAGTCAGTGGAACATGAAAGT 59.424 41.667 0.00 0.00 44.52 2.66
3642 7638 4.576053 TGTCAAGTCAGTGGAACATGAAAG 59.424 41.667 0.00 0.00 44.52 2.62
3643 7639 4.522114 TGTCAAGTCAGTGGAACATGAAA 58.478 39.130 0.00 0.00 44.52 2.69
3644 7640 4.149511 TGTCAAGTCAGTGGAACATGAA 57.850 40.909 0.00 0.00 44.52 2.57
3645 7641 3.836365 TGTCAAGTCAGTGGAACATGA 57.164 42.857 0.00 0.00 44.52 3.07
3646 7642 3.879295 ACTTGTCAAGTCAGTGGAACATG 59.121 43.478 12.62 0.00 37.87 3.21
3647 7643 4.156455 ACTTGTCAAGTCAGTGGAACAT 57.844 40.909 12.62 0.00 37.87 2.71
3648 7644 3.627395 ACTTGTCAAGTCAGTGGAACA 57.373 42.857 12.62 0.00 36.58 3.18
3649 7645 4.965119 AAACTTGTCAAGTCAGTGGAAC 57.035 40.909 18.42 0.00 41.91 3.62
3650 7646 6.353323 TCATAAACTTGTCAAGTCAGTGGAA 58.647 36.000 18.42 0.00 41.91 3.53
3651 7647 5.924356 TCATAAACTTGTCAAGTCAGTGGA 58.076 37.500 18.42 10.02 41.91 4.02
3652 7648 6.808008 ATCATAAACTTGTCAAGTCAGTGG 57.192 37.500 18.42 8.05 41.91 4.00
3655 7651 9.778993 CCAAATATCATAAACTTGTCAAGTCAG 57.221 33.333 18.42 8.99 41.91 3.51
3656 7652 9.295825 ACCAAATATCATAAACTTGTCAAGTCA 57.704 29.630 18.42 10.11 41.91 3.41
3665 7661 9.730420 GCGTGAATAACCAAATATCATAAACTT 57.270 29.630 0.00 0.00 0.00 2.66
3666 7662 8.898761 TGCGTGAATAACCAAATATCATAAACT 58.101 29.630 0.00 0.00 0.00 2.66
3667 7663 9.509855 TTGCGTGAATAACCAAATATCATAAAC 57.490 29.630 0.00 0.00 0.00 2.01
3668 7664 9.729023 CTTGCGTGAATAACCAAATATCATAAA 57.271 29.630 0.00 0.00 0.00 1.40
3669 7665 9.114952 TCTTGCGTGAATAACCAAATATCATAA 57.885 29.630 0.00 0.00 0.00 1.90
3670 7666 8.669946 TCTTGCGTGAATAACCAAATATCATA 57.330 30.769 0.00 0.00 0.00 2.15
3671 7667 7.566760 TCTTGCGTGAATAACCAAATATCAT 57.433 32.000 0.00 0.00 0.00 2.45
3672 7668 6.993786 TCTTGCGTGAATAACCAAATATCA 57.006 33.333 0.00 0.00 0.00 2.15
3673 7669 6.410914 CGTTCTTGCGTGAATAACCAAATATC 59.589 38.462 0.00 0.00 0.00 1.63
3674 7670 6.092944 TCGTTCTTGCGTGAATAACCAAATAT 59.907 34.615 0.00 0.00 0.00 1.28
3675 7671 5.408909 TCGTTCTTGCGTGAATAACCAAATA 59.591 36.000 0.00 0.00 0.00 1.40
3676 7672 4.214545 TCGTTCTTGCGTGAATAACCAAAT 59.785 37.500 0.00 0.00 0.00 2.32
3677 7673 3.560481 TCGTTCTTGCGTGAATAACCAAA 59.440 39.130 0.00 0.00 0.00 3.28
3678 7674 3.132160 TCGTTCTTGCGTGAATAACCAA 58.868 40.909 0.00 0.00 0.00 3.67
3679 7675 2.756829 TCGTTCTTGCGTGAATAACCA 58.243 42.857 0.00 0.00 0.00 3.67
3680 7676 3.799137 TTCGTTCTTGCGTGAATAACC 57.201 42.857 0.00 0.00 0.00 2.85
3681 7677 5.379003 TGATTTCGTTCTTGCGTGAATAAC 58.621 37.500 0.00 0.00 0.00 1.89
3682 7678 5.407084 TCTGATTTCGTTCTTGCGTGAATAA 59.593 36.000 0.00 0.00 0.00 1.40
3683 7679 4.926832 TCTGATTTCGTTCTTGCGTGAATA 59.073 37.500 0.00 0.00 0.00 1.75
3684 7680 3.745975 TCTGATTTCGTTCTTGCGTGAAT 59.254 39.130 0.00 0.00 0.00 2.57
3685 7681 3.127589 TCTGATTTCGTTCTTGCGTGAA 58.872 40.909 0.00 0.00 0.00 3.18
3686 7682 2.749776 TCTGATTTCGTTCTTGCGTGA 58.250 42.857 0.00 0.00 0.00 4.35
3687 7683 3.729526 ATCTGATTTCGTTCTTGCGTG 57.270 42.857 0.00 0.00 0.00 5.34
3688 7684 4.929808 ACTAATCTGATTTCGTTCTTGCGT 59.070 37.500 8.38 0.00 0.00 5.24
3689 7685 5.456192 ACTAATCTGATTTCGTTCTTGCG 57.544 39.130 8.38 0.00 0.00 4.85
3690 7686 9.774742 AAAATACTAATCTGATTTCGTTCTTGC 57.225 29.630 8.38 0.00 0.00 4.01
3708 7704 9.976511 CATTCGGTAGGACATTCTAAAATACTA 57.023 33.333 0.00 0.00 0.00 1.82
3709 7705 8.483758 ACATTCGGTAGGACATTCTAAAATACT 58.516 33.333 0.00 0.00 0.00 2.12
3710 7706 8.658499 ACATTCGGTAGGACATTCTAAAATAC 57.342 34.615 0.00 0.00 0.00 1.89
3711 7707 9.104965 CAACATTCGGTAGGACATTCTAAAATA 57.895 33.333 0.00 0.00 0.00 1.40
3712 7708 7.067008 CCAACATTCGGTAGGACATTCTAAAAT 59.933 37.037 0.00 0.00 0.00 1.82
3713 7709 6.373216 CCAACATTCGGTAGGACATTCTAAAA 59.627 38.462 0.00 0.00 0.00 1.52
3714 7710 5.878116 CCAACATTCGGTAGGACATTCTAAA 59.122 40.000 0.00 0.00 0.00 1.85
3715 7711 5.424757 CCAACATTCGGTAGGACATTCTAA 58.575 41.667 0.00 0.00 0.00 2.10
3716 7712 4.682320 GCCAACATTCGGTAGGACATTCTA 60.682 45.833 0.00 0.00 0.00 2.10
3717 7713 3.873910 CCAACATTCGGTAGGACATTCT 58.126 45.455 0.00 0.00 0.00 2.40
3718 7714 2.354821 GCCAACATTCGGTAGGACATTC 59.645 50.000 0.00 0.00 0.00 2.67
3719 7715 2.026262 AGCCAACATTCGGTAGGACATT 60.026 45.455 0.00 0.00 0.00 2.71
3720 7716 1.559682 AGCCAACATTCGGTAGGACAT 59.440 47.619 0.00 0.00 0.00 3.06
3721 7717 0.981183 AGCCAACATTCGGTAGGACA 59.019 50.000 0.00 0.00 0.00 4.02
3722 7718 2.973694 TAGCCAACATTCGGTAGGAC 57.026 50.000 0.00 0.00 0.00 3.85
3723 7719 4.497291 AATTAGCCAACATTCGGTAGGA 57.503 40.909 0.00 0.00 0.00 2.94
3724 7720 5.576447 AAAATTAGCCAACATTCGGTAGG 57.424 39.130 0.00 0.00 0.00 3.18
3802 7798 9.839817 TGAATTCAATCGACTGGGTATTATTAA 57.160 29.630 5.45 0.00 0.00 1.40
3803 7799 9.489084 CTGAATTCAATCGACTGGGTATTATTA 57.511 33.333 9.88 0.00 0.00 0.98
3804 7800 7.993183 ACTGAATTCAATCGACTGGGTATTATT 59.007 33.333 9.88 0.00 0.00 1.40
3805 7801 7.509546 ACTGAATTCAATCGACTGGGTATTAT 58.490 34.615 9.88 0.00 0.00 1.28
3806 7802 6.884832 ACTGAATTCAATCGACTGGGTATTA 58.115 36.000 9.88 0.00 0.00 0.98
3807 7803 5.745227 ACTGAATTCAATCGACTGGGTATT 58.255 37.500 9.88 0.00 0.00 1.89
3808 7804 5.104941 TGACTGAATTCAATCGACTGGGTAT 60.105 40.000 11.92 0.00 0.00 2.73
3809 7805 4.221924 TGACTGAATTCAATCGACTGGGTA 59.778 41.667 11.92 0.00 0.00 3.69
3810 7806 3.007940 TGACTGAATTCAATCGACTGGGT 59.992 43.478 11.92 2.01 0.00 4.51
3811 7807 3.599343 TGACTGAATTCAATCGACTGGG 58.401 45.455 11.92 0.00 0.00 4.45
3812 7808 4.272018 GGATGACTGAATTCAATCGACTGG 59.728 45.833 11.92 0.00 0.00 4.00
3813 7809 5.114780 AGGATGACTGAATTCAATCGACTG 58.885 41.667 11.92 0.18 0.00 3.51
3814 7810 5.350504 AGGATGACTGAATTCAATCGACT 57.649 39.130 11.92 7.10 0.00 4.18
3815 7811 5.174035 CGTAGGATGACTGAATTCAATCGAC 59.826 44.000 11.92 10.67 0.00 4.20
3816 7812 5.281727 CGTAGGATGACTGAATTCAATCGA 58.718 41.667 11.92 2.56 0.00 3.59
3817 7813 5.567234 CGTAGGATGACTGAATTCAATCG 57.433 43.478 11.92 2.29 0.00 3.34
3834 7830 3.090219 GCAGTAGGCCACCCGTAGG 62.090 68.421 5.01 0.00 42.85 3.18
3835 7831 2.058595 AGCAGTAGGCCACCCGTAG 61.059 63.158 5.01 0.00 46.50 3.51
3836 7832 2.038329 AGCAGTAGGCCACCCGTA 59.962 61.111 5.01 0.00 46.50 4.02
3837 7833 3.706373 CAGCAGTAGGCCACCCGT 61.706 66.667 5.01 0.00 46.50 5.28
3838 7834 4.473520 CCAGCAGTAGGCCACCCG 62.474 72.222 5.01 0.00 46.50 5.28
3839 7835 4.803908 GCCAGCAGTAGGCCACCC 62.804 72.222 5.01 0.00 46.50 4.61
3845 7841 1.524621 CCAATCGGCCAGCAGTAGG 60.525 63.158 2.24 0.00 0.00 3.18
3846 7842 0.107456 ATCCAATCGGCCAGCAGTAG 59.893 55.000 2.24 0.00 0.00 2.57
3847 7843 0.106708 GATCCAATCGGCCAGCAGTA 59.893 55.000 2.24 0.00 0.00 2.74
3848 7844 1.153086 GATCCAATCGGCCAGCAGT 60.153 57.895 2.24 0.00 0.00 4.40
3849 7845 1.895707 GGATCCAATCGGCCAGCAG 60.896 63.158 6.95 0.00 0.00 4.24
3850 7846 2.192979 GGATCCAATCGGCCAGCA 59.807 61.111 6.95 0.00 0.00 4.41
3851 7847 1.895707 CTGGATCCAATCGGCCAGC 60.896 63.158 17.00 0.00 41.17 4.85
3852 7848 4.469883 CTGGATCCAATCGGCCAG 57.530 61.111 17.00 0.00 41.62 4.85
3853 7849 2.192979 GCTGGATCCAATCGGCCA 59.807 61.111 17.00 0.00 0.00 5.36
3854 7850 2.595754 GGCTGGATCCAATCGGCC 60.596 66.667 22.86 22.86 39.98 6.13
3855 7851 2.974698 CGGCTGGATCCAATCGGC 60.975 66.667 17.00 15.24 0.00 5.54
3856 7852 1.595382 GACGGCTGGATCCAATCGG 60.595 63.158 28.58 22.17 0.00 4.18
3857 7853 1.595382 GGACGGCTGGATCCAATCG 60.595 63.158 25.61 25.61 34.87 3.34
3858 7854 1.048601 TAGGACGGCTGGATCCAATC 58.951 55.000 17.00 10.38 37.47 2.67
3859 7855 0.759346 GTAGGACGGCTGGATCCAAT 59.241 55.000 17.00 1.24 37.47 3.16
3860 7856 0.325296 AGTAGGACGGCTGGATCCAA 60.325 55.000 17.00 0.00 37.47 3.53
3861 7857 1.043116 CAGTAGGACGGCTGGATCCA 61.043 60.000 15.27 15.27 37.47 3.41
3862 7858 1.742768 CAGTAGGACGGCTGGATCC 59.257 63.158 4.20 4.20 34.98 3.36
3867 7863 2.579201 CCACCAGTAGGACGGCTG 59.421 66.667 0.00 0.00 38.69 4.85
3868 7864 3.391382 GCCACCAGTAGGACGGCT 61.391 66.667 10.90 0.00 46.67 5.52
3872 7868 0.462047 CAATCGGCCACCAGTAGGAC 60.462 60.000 2.24 0.00 38.69 3.85
3873 7869 1.622607 CCAATCGGCCACCAGTAGGA 61.623 60.000 2.24 0.00 38.69 2.94
3874 7870 1.153168 CCAATCGGCCACCAGTAGG 60.153 63.158 2.24 0.00 42.21 3.18
3875 7871 4.540153 CCAATCGGCCACCAGTAG 57.460 61.111 2.24 0.00 0.00 2.57
3906 7902 3.757248 ATCCAATCGGCCGGCAGTC 62.757 63.158 30.85 10.33 0.00 3.51
3907 7903 3.757248 GATCCAATCGGCCGGCAGT 62.757 63.158 30.85 12.37 0.00 4.40
3908 7904 2.974698 GATCCAATCGGCCGGCAG 60.975 66.667 30.85 26.21 0.00 4.85
3909 7905 4.562425 GGATCCAATCGGCCGGCA 62.562 66.667 30.85 9.36 0.00 5.69
3910 7906 4.562425 TGGATCCAATCGGCCGGC 62.562 66.667 27.83 21.18 0.00 6.13
3911 7907 2.281070 CTGGATCCAATCGGCCGG 60.281 66.667 27.83 9.38 0.00 6.13
3912 7908 1.595382 GACTGGATCCAATCGGCCG 60.595 63.158 22.12 22.12 0.00 6.13
3913 7909 1.595382 CGACTGGATCCAATCGGCC 60.595 63.158 32.52 6.34 41.20 6.13
3914 7910 4.033894 CGACTGGATCCAATCGGC 57.966 61.111 32.52 15.78 41.20 5.54
3916 7912 1.595382 GGCCGACTGGATCCAATCG 60.595 63.158 33.02 33.02 43.95 3.34
3917 7913 1.227973 GGGCCGACTGGATCCAATC 60.228 63.158 17.00 15.09 37.49 2.67
3918 7914 2.000701 TGGGCCGACTGGATCCAAT 61.001 57.895 17.00 5.36 37.23 3.16
3919 7915 2.609299 TGGGCCGACTGGATCCAA 60.609 61.111 17.00 0.00 37.23 3.53
3920 7916 3.399181 GTGGGCCGACTGGATCCA 61.399 66.667 15.27 15.27 37.64 3.41
3921 7917 3.083997 AGTGGGCCGACTGGATCC 61.084 66.667 20.84 4.20 37.49 3.36
3922 7918 2.187946 CAGTGGGCCGACTGGATC 59.812 66.667 33.66 2.03 39.85 3.36
3923 7919 4.101448 GCAGTGGGCCGACTGGAT 62.101 66.667 38.70 10.62 43.17 3.41
3933 7929 3.136123 CAATCGGCCAGCAGTGGG 61.136 66.667 2.24 0.00 45.17 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.