Multiple sequence alignment - TraesCS3D01G370400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G370400 chr3D 100.000 3335 0 0 1 3335 484286357 484289691 0.000000e+00 6159.0
1 TraesCS3D01G370400 chr3A 93.179 2815 119 32 1 2784 627251464 627254236 0.000000e+00 4067.0
2 TraesCS3D01G370400 chr3B 92.699 2219 99 27 588 2784 647077780 647079957 0.000000e+00 3142.0
3 TraesCS3D01G370400 chr3B 83.748 523 34 13 1 486 647077195 647077703 6.560000e-122 448.0
4 TraesCS3D01G370400 chr3B 93.243 74 5 0 3260 3333 417371607 417371680 3.520000e-20 110.0
5 TraesCS3D01G370400 chr3B 93.056 72 5 0 3264 3335 745227169 745227240 4.550000e-19 106.0
6 TraesCS3D01G370400 chr5D 90.680 397 37 0 1168 1564 389377 388981 2.280000e-146 529.0
7 TraesCS3D01G370400 chr5D 81.750 400 69 4 1167 1564 210375786 210375389 6.900000e-87 331.0
8 TraesCS3D01G370400 chr5D 96.053 76 3 0 3260 3335 532806402 532806477 1.260000e-24 124.0
9 TraesCS3D01G370400 chr5D 93.333 75 5 0 3261 3335 521117622 521117696 9.780000e-21 111.0
10 TraesCS3D01G370400 chr5A 90.000 400 40 0 1165 1564 228156 228555 4.930000e-143 518.0
11 TraesCS3D01G370400 chr4A 85.250 400 59 0 1165 1564 576703438 576703039 2.390000e-111 412.0
12 TraesCS3D01G370400 chr4D 84.635 397 61 0 1165 1561 26668444 26668840 2.410000e-106 396.0
13 TraesCS3D01G370400 chr4B 84.635 397 61 0 1165 1561 39120606 39121002 2.410000e-106 396.0
14 TraesCS3D01G370400 chr4B 92.683 41 2 1 3277 3316 514510964 514511004 1.290000e-04 58.4
15 TraesCS3D01G370400 chr5B 81.707 410 70 5 1167 1573 223984941 223984534 1.480000e-88 337.0
16 TraesCS3D01G370400 chr6D 93.421 76 5 0 3260 3335 454229754 454229679 2.720000e-21 113.0
17 TraesCS3D01G370400 chr7A 92.208 77 5 1 3258 3333 713788181 713788257 1.270000e-19 108.0
18 TraesCS3D01G370400 chr2B 91.892 74 6 0 3260 3333 534705473 534705400 1.640000e-18 104.0
19 TraesCS3D01G370400 chr1A 87.654 81 8 2 2266 2345 468605910 468605831 3.540000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G370400 chr3D 484286357 484289691 3334 False 6159 6159 100.0000 1 3335 1 chr3D.!!$F1 3334
1 TraesCS3D01G370400 chr3A 627251464 627254236 2772 False 4067 4067 93.1790 1 2784 1 chr3A.!!$F1 2783
2 TraesCS3D01G370400 chr3B 647077195 647079957 2762 False 1795 3142 88.2235 1 2784 2 chr3B.!!$F3 2783

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
566 636 0.518636 CAACATCCGTTGCTGGTCAG 59.481 55.0 0.0 0.0 45.64 3.51 F
2237 2344 0.319555 CTCGTTTCACCCTGCGAAGA 60.320 55.0 0.0 0.0 32.84 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2253 2360 0.581529 ACATCTGCGACACAAACACG 59.418 50.0 0.0 0.0 0.0 4.49 R
3212 3322 0.032952 GTAGACACGCACACCCTGAA 59.967 55.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 3.186047 CGATGTTGTCCCGGTCGC 61.186 66.667 0.00 0.00 0.00 5.19
138 154 3.036084 AAGAACGCAGCGGACACG 61.036 61.111 21.15 0.00 44.63 4.49
148 164 4.849329 CGGACACGCGAGCTACCC 62.849 72.222 15.93 3.86 0.00 3.69
149 165 3.450115 GGACACGCGAGCTACCCT 61.450 66.667 15.93 0.00 0.00 4.34
150 166 2.117156 GGACACGCGAGCTACCCTA 61.117 63.158 15.93 0.00 0.00 3.53
151 167 1.063811 GACACGCGAGCTACCCTAC 59.936 63.158 15.93 0.00 0.00 3.18
152 168 2.333706 GACACGCGAGCTACCCTACC 62.334 65.000 15.93 0.00 0.00 3.18
153 169 3.207669 ACGCGAGCTACCCTACCG 61.208 66.667 15.93 0.00 0.00 4.02
154 170 2.898840 CGCGAGCTACCCTACCGA 60.899 66.667 0.00 0.00 0.00 4.69
155 171 2.894565 CGCGAGCTACCCTACCGAG 61.895 68.421 0.00 0.00 0.00 4.63
156 172 1.525535 GCGAGCTACCCTACCGAGA 60.526 63.158 0.00 0.00 0.00 4.04
157 173 1.508808 GCGAGCTACCCTACCGAGAG 61.509 65.000 0.00 0.00 0.00 3.20
158 174 1.508808 CGAGCTACCCTACCGAGAGC 61.509 65.000 0.00 0.00 0.00 4.09
162 178 0.885596 CTACCCTACCGAGAGCGAGG 60.886 65.000 0.00 0.00 40.82 4.63
296 312 3.827898 CGTCACTCCGAGCTCCCC 61.828 72.222 8.47 0.00 0.00 4.81
297 313 3.827898 GTCACTCCGAGCTCCCCG 61.828 72.222 8.47 0.00 0.00 5.73
300 316 4.698625 ACTCCGAGCTCCCCGGTT 62.699 66.667 8.47 0.00 46.53 4.44
342 373 3.432890 GGTATGCTTTCCTCTTCCTCCTG 60.433 52.174 0.00 0.00 0.00 3.86
361 392 3.432782 CTGCTTTCTGAATCGATTTGGC 58.567 45.455 12.81 10.58 0.00 4.52
366 397 0.657840 CTGAATCGATTTGGCCCGTC 59.342 55.000 12.81 0.00 0.00 4.79
368 399 2.374877 GAATCGATTTGGCCCGTCGC 62.375 60.000 12.81 0.00 35.48 5.19
453 493 2.604382 GCTGGCATGGGGGTTGTT 60.604 61.111 0.00 0.00 0.00 2.83
454 494 2.946346 GCTGGCATGGGGGTTGTTG 61.946 63.158 0.00 0.00 0.00 3.33
489 530 2.702788 TACGACGCGATCCTTGGCA 61.703 57.895 15.93 0.00 0.00 4.92
495 544 1.153086 GCGATCCTTGGCATGGTCT 60.153 57.895 17.94 7.92 0.00 3.85
515 564 2.353357 TCCATGGTGCTTGATCATCC 57.647 50.000 12.58 0.00 0.00 3.51
537 607 3.743396 CGATTGGTAGGATCTTTAGCTGC 59.257 47.826 0.00 0.00 0.00 5.25
552 622 1.798735 CTGCTAGCTTGCGCAACAT 59.201 52.632 21.02 13.12 39.10 2.71
566 636 0.518636 CAACATCCGTTGCTGGTCAG 59.481 55.000 0.00 0.00 45.64 3.51
600 675 3.636231 TTCCCTGGTGACCGCTGG 61.636 66.667 0.00 0.00 0.00 4.85
706 781 2.663279 ACACGTGATTTGCGAAAGAC 57.337 45.000 25.01 0.00 0.00 3.01
829 912 1.647545 CTGCGTGATGACCGGCAAAT 61.648 55.000 0.00 0.00 34.60 2.32
903 991 6.327934 AGCAAATATTCTTGTGATGCTCAAC 58.672 36.000 3.28 0.00 38.16 3.18
904 992 5.517770 GCAAATATTCTTGTGATGCTCAACC 59.482 40.000 0.00 0.00 0.00 3.77
905 993 6.623486 CAAATATTCTTGTGATGCTCAACCA 58.377 36.000 0.00 0.00 0.00 3.67
906 994 7.262772 CAAATATTCTTGTGATGCTCAACCAT 58.737 34.615 0.00 0.00 0.00 3.55
907 995 4.713824 ATTCTTGTGATGCTCAACCATG 57.286 40.909 0.00 0.00 0.00 3.66
908 996 1.814394 TCTTGTGATGCTCAACCATGC 59.186 47.619 0.00 0.00 0.00 4.06
909 997 0.889994 TTGTGATGCTCAACCATGCC 59.110 50.000 0.00 0.00 0.00 4.40
912 1000 1.380246 GATGCTCAACCATGCCCCA 60.380 57.895 0.00 0.00 0.00 4.96
913 1001 0.971959 GATGCTCAACCATGCCCCAA 60.972 55.000 0.00 0.00 0.00 4.12
914 1002 0.974010 ATGCTCAACCATGCCCCAAG 60.974 55.000 0.00 0.00 0.00 3.61
915 1003 3.010413 GCTCAACCATGCCCCAAGC 62.010 63.158 0.00 0.00 44.14 4.01
934 1022 4.531659 AGCGCCGTTGATCTTTTATTAC 57.468 40.909 2.29 0.00 0.00 1.89
1032 1120 1.252904 ATGTCCAGCCCATTGTGTGC 61.253 55.000 0.00 0.00 0.00 4.57
1106 1197 5.304101 TCCCAAATTCAGTTAGCATGTTGTT 59.696 36.000 0.00 0.00 0.00 2.83
1107 1198 5.990996 CCCAAATTCAGTTAGCATGTTGTTT 59.009 36.000 0.00 0.00 0.00 2.83
1108 1199 6.073657 CCCAAATTCAGTTAGCATGTTGTTTG 60.074 38.462 0.00 0.00 0.00 2.93
1109 1200 6.357198 CAAATTCAGTTAGCATGTTGTTTGC 58.643 36.000 0.00 0.00 40.45 3.68
1111 1202 3.221771 TCAGTTAGCATGTTGTTTGCCT 58.778 40.909 0.00 0.00 41.06 4.75
1113 1204 2.958355 AGTTAGCATGTTGTTTGCCTGT 59.042 40.909 0.00 0.00 41.06 4.00
1114 1205 3.384467 AGTTAGCATGTTGTTTGCCTGTT 59.616 39.130 0.00 0.00 41.06 3.16
1115 1206 2.228138 AGCATGTTGTTTGCCTGTTG 57.772 45.000 0.00 0.00 41.06 3.33
1116 1207 1.481772 AGCATGTTGTTTGCCTGTTGT 59.518 42.857 0.00 0.00 41.06 3.32
1151 1248 3.244318 CGAACTGATCATCCATCCATCCA 60.244 47.826 0.00 0.00 0.00 3.41
1158 1255 1.538512 CATCCATCCATCCATTCGTGC 59.461 52.381 0.00 0.00 0.00 5.34
1474 1571 0.905357 CCAACCGGGAGAAGATGACT 59.095 55.000 6.32 0.00 40.01 3.41
2005 2102 3.270877 GAAGGATCTGTACGGCAATGTT 58.729 45.455 0.00 0.00 0.00 2.71
2235 2342 1.959226 GCTCGTTTCACCCTGCGAA 60.959 57.895 0.00 0.00 32.84 4.70
2236 2343 1.901650 GCTCGTTTCACCCTGCGAAG 61.902 60.000 0.00 0.00 32.84 3.79
2237 2344 0.319555 CTCGTTTCACCCTGCGAAGA 60.320 55.000 0.00 0.00 32.84 2.87
2240 2347 1.149148 GTTTCACCCTGCGAAGAGAC 58.851 55.000 0.00 0.00 0.00 3.36
2253 2360 0.107654 AAGAGACTAATGGCGTGCCC 60.108 55.000 8.69 0.00 34.56 5.36
2254 2361 1.883084 GAGACTAATGGCGTGCCCG 60.883 63.158 8.69 0.00 35.87 6.13
2255 2362 2.125269 GACTAATGGCGTGCCCGT 60.125 61.111 8.69 0.21 35.87 5.28
2256 2363 2.435938 ACTAATGGCGTGCCCGTG 60.436 61.111 8.69 0.00 35.87 4.94
2348 2455 0.976641 TTCTGATCAGTCCGTGGCTT 59.023 50.000 21.92 0.00 0.00 4.35
2349 2456 0.247460 TCTGATCAGTCCGTGGCTTG 59.753 55.000 21.92 0.00 0.00 4.01
2393 2500 1.098050 GCTTGAGGTCCAAATCGCAT 58.902 50.000 0.00 0.00 33.76 4.73
2425 2532 1.228003 TCATGGTTTCCACGGCGTT 60.228 52.632 11.19 0.00 35.80 4.84
2510 2617 3.253921 TCGAACAATTCTGTAGGACGTCA 59.746 43.478 18.91 0.00 33.45 4.35
2570 2677 4.561105 GGACATTTATTTTGGTTTCGGCA 58.439 39.130 0.00 0.00 0.00 5.69
2665 2772 3.756933 TCTTGTACCTTTTGTAGCGGT 57.243 42.857 0.00 0.00 34.86 5.68
2691 2798 3.228453 TCTTGTCGAACTACCTGGTCTT 58.772 45.455 0.63 0.00 0.00 3.01
2766 2876 9.492973 ACATTTTGAATTATTGAGGGAAGTTTG 57.507 29.630 0.00 0.00 0.00 2.93
2767 2877 7.961325 TTTTGAATTATTGAGGGAAGTTTGC 57.039 32.000 0.00 0.00 0.00 3.68
2777 2887 4.023536 TGAGGGAAGTTTGCGTTTGTTATC 60.024 41.667 0.00 0.00 0.00 1.75
2778 2888 3.886505 AGGGAAGTTTGCGTTTGTTATCA 59.113 39.130 0.00 0.00 0.00 2.15
2784 2894 5.270853 AGTTTGCGTTTGTTATCAGTTGTC 58.729 37.500 0.00 0.00 0.00 3.18
2785 2895 5.065988 AGTTTGCGTTTGTTATCAGTTGTCT 59.934 36.000 0.00 0.00 0.00 3.41
2786 2896 5.493133 TTGCGTTTGTTATCAGTTGTCTT 57.507 34.783 0.00 0.00 0.00 3.01
2787 2897 5.493133 TGCGTTTGTTATCAGTTGTCTTT 57.507 34.783 0.00 0.00 0.00 2.52
2788 2898 5.885881 TGCGTTTGTTATCAGTTGTCTTTT 58.114 33.333 0.00 0.00 0.00 2.27
2789 2899 7.017498 TGCGTTTGTTATCAGTTGTCTTTTA 57.983 32.000 0.00 0.00 0.00 1.52
2790 2900 7.644490 TGCGTTTGTTATCAGTTGTCTTTTAT 58.356 30.769 0.00 0.00 0.00 1.40
2791 2901 8.775527 TGCGTTTGTTATCAGTTGTCTTTTATA 58.224 29.630 0.00 0.00 0.00 0.98
2792 2902 9.769093 GCGTTTGTTATCAGTTGTCTTTTATAT 57.231 29.630 0.00 0.00 0.00 0.86
2800 2910 8.873215 ATCAGTTGTCTTTTATATGGAGTACG 57.127 34.615 0.00 0.00 0.00 3.67
2801 2911 7.833786 TCAGTTGTCTTTTATATGGAGTACGT 58.166 34.615 0.00 0.00 0.00 3.57
2802 2912 8.959548 TCAGTTGTCTTTTATATGGAGTACGTA 58.040 33.333 0.00 0.00 0.00 3.57
2803 2913 9.745880 CAGTTGTCTTTTATATGGAGTACGTAT 57.254 33.333 0.00 0.00 35.49 3.06
2804 2914 9.745880 AGTTGTCTTTTATATGGAGTACGTATG 57.254 33.333 0.00 0.00 33.42 2.39
2805 2915 9.525409 GTTGTCTTTTATATGGAGTACGTATGT 57.475 33.333 0.00 0.00 33.42 2.29
2807 2917 9.524106 TGTCTTTTATATGGAGTACGTATGTTG 57.476 33.333 0.00 0.00 33.42 3.33
2808 2918 9.525409 GTCTTTTATATGGAGTACGTATGTTGT 57.475 33.333 0.00 0.00 33.42 3.32
2809 2919 9.524106 TCTTTTATATGGAGTACGTATGTTGTG 57.476 33.333 0.00 0.00 33.42 3.33
2810 2920 8.651391 TTTTATATGGAGTACGTATGTTGTGG 57.349 34.615 0.00 0.00 33.42 4.17
2811 2921 5.864418 ATATGGAGTACGTATGTTGTGGT 57.136 39.130 0.00 0.00 30.11 4.16
2812 2922 6.964807 ATATGGAGTACGTATGTTGTGGTA 57.035 37.500 0.00 0.00 30.11 3.25
2813 2923 5.664294 ATGGAGTACGTATGTTGTGGTAA 57.336 39.130 0.00 0.00 0.00 2.85
2814 2924 5.465532 TGGAGTACGTATGTTGTGGTAAA 57.534 39.130 0.00 0.00 0.00 2.01
2815 2925 5.851720 TGGAGTACGTATGTTGTGGTAAAA 58.148 37.500 0.00 0.00 0.00 1.52
2816 2926 6.286758 TGGAGTACGTATGTTGTGGTAAAAA 58.713 36.000 0.00 0.00 0.00 1.94
2840 2950 7.833285 AAACATAAAACATGGAGTAGTTGGT 57.167 32.000 0.00 0.00 0.00 3.67
2841 2951 7.833285 AACATAAAACATGGAGTAGTTGGTT 57.167 32.000 0.00 0.00 0.00 3.67
2842 2952 7.833285 ACATAAAACATGGAGTAGTTGGTTT 57.167 32.000 0.00 0.00 34.78 3.27
2843 2953 7.657336 ACATAAAACATGGAGTAGTTGGTTTG 58.343 34.615 0.00 0.00 32.79 2.93
2844 2954 7.286775 ACATAAAACATGGAGTAGTTGGTTTGT 59.713 33.333 0.00 0.00 32.79 2.83
2845 2955 6.538945 AAAACATGGAGTAGTTGGTTTGTT 57.461 33.333 0.00 0.00 29.52 2.83
2846 2956 7.648039 AAAACATGGAGTAGTTGGTTTGTTA 57.352 32.000 0.00 0.00 29.52 2.41
2847 2957 6.628919 AACATGGAGTAGTTGGTTTGTTAC 57.371 37.500 0.00 0.00 0.00 2.50
2848 2958 4.753107 ACATGGAGTAGTTGGTTTGTTACG 59.247 41.667 0.00 0.00 0.00 3.18
2849 2959 4.669206 TGGAGTAGTTGGTTTGTTACGA 57.331 40.909 0.00 0.00 0.00 3.43
2850 2960 5.217978 TGGAGTAGTTGGTTTGTTACGAT 57.782 39.130 0.00 0.00 0.00 3.73
2851 2961 5.613329 TGGAGTAGTTGGTTTGTTACGATT 58.387 37.500 0.00 0.00 0.00 3.34
2852 2962 5.697633 TGGAGTAGTTGGTTTGTTACGATTC 59.302 40.000 0.00 0.00 0.00 2.52
2853 2963 5.930569 GGAGTAGTTGGTTTGTTACGATTCT 59.069 40.000 0.00 0.00 0.00 2.40
2854 2964 7.092716 GGAGTAGTTGGTTTGTTACGATTCTA 58.907 38.462 0.00 0.00 0.00 2.10
2855 2965 7.275123 GGAGTAGTTGGTTTGTTACGATTCTAG 59.725 40.741 0.00 0.00 0.00 2.43
2856 2966 5.857822 AGTTGGTTTGTTACGATTCTAGC 57.142 39.130 0.00 0.00 0.00 3.42
2857 2967 5.302360 AGTTGGTTTGTTACGATTCTAGCA 58.698 37.500 0.00 0.00 0.00 3.49
2858 2968 5.761234 AGTTGGTTTGTTACGATTCTAGCAA 59.239 36.000 0.00 0.00 0.00 3.91
2859 2969 5.856126 TGGTTTGTTACGATTCTAGCAAG 57.144 39.130 0.00 0.00 0.00 4.01
2860 2970 4.153475 TGGTTTGTTACGATTCTAGCAAGC 59.847 41.667 0.00 0.00 0.00 4.01
2861 2971 4.436986 GGTTTGTTACGATTCTAGCAAGCC 60.437 45.833 0.00 0.00 33.33 4.35
2862 2972 3.887621 TGTTACGATTCTAGCAAGCCT 57.112 42.857 0.00 0.00 0.00 4.58
2863 2973 3.521560 TGTTACGATTCTAGCAAGCCTG 58.478 45.455 0.00 0.00 0.00 4.85
2864 2974 3.194755 TGTTACGATTCTAGCAAGCCTGA 59.805 43.478 0.00 0.00 0.00 3.86
2865 2975 2.301577 ACGATTCTAGCAAGCCTGAC 57.698 50.000 0.00 0.00 0.00 3.51
2866 2976 1.550524 ACGATTCTAGCAAGCCTGACA 59.449 47.619 0.00 0.00 0.00 3.58
2867 2977 2.028112 ACGATTCTAGCAAGCCTGACAA 60.028 45.455 0.00 0.00 0.00 3.18
2868 2978 3.201290 CGATTCTAGCAAGCCTGACAAT 58.799 45.455 0.00 0.00 0.00 2.71
2869 2979 3.002042 CGATTCTAGCAAGCCTGACAATG 59.998 47.826 0.00 0.00 0.00 2.82
2870 2980 2.408271 TCTAGCAAGCCTGACAATGG 57.592 50.000 0.00 0.00 0.00 3.16
2882 2992 5.179045 CCTGACAATGGCAATTACTCATC 57.821 43.478 0.00 0.00 0.00 2.92
2883 2993 4.885907 CCTGACAATGGCAATTACTCATCT 59.114 41.667 0.00 0.00 0.00 2.90
2884 2994 6.057533 CCTGACAATGGCAATTACTCATCTA 58.942 40.000 0.00 0.00 0.00 1.98
2885 2995 6.543465 CCTGACAATGGCAATTACTCATCTAA 59.457 38.462 0.00 0.00 0.00 2.10
2886 2996 7.067372 CCTGACAATGGCAATTACTCATCTAAA 59.933 37.037 0.00 0.00 0.00 1.85
2887 2997 7.988737 TGACAATGGCAATTACTCATCTAAAG 58.011 34.615 0.00 0.00 0.00 1.85
2888 2998 7.067372 TGACAATGGCAATTACTCATCTAAAGG 59.933 37.037 0.00 0.00 0.00 3.11
2889 2999 7.118723 ACAATGGCAATTACTCATCTAAAGGA 58.881 34.615 0.00 0.00 0.00 3.36
2890 3000 7.781693 ACAATGGCAATTACTCATCTAAAGGAT 59.218 33.333 0.00 0.00 34.51 3.24
2901 3011 4.636249 CATCTAAAGGATGCTGGAGTACC 58.364 47.826 0.00 0.00 44.21 3.34
2902 3012 3.995636 TCTAAAGGATGCTGGAGTACCT 58.004 45.455 0.00 0.00 37.04 3.08
2903 3013 3.706594 TCTAAAGGATGCTGGAGTACCTG 59.293 47.826 0.00 0.00 38.02 4.00
2904 3014 1.958288 AAGGATGCTGGAGTACCTGT 58.042 50.000 0.00 0.00 37.43 4.00
2905 3015 1.490574 AGGATGCTGGAGTACCTGTC 58.509 55.000 0.00 0.00 37.43 3.51
2906 3016 1.007721 AGGATGCTGGAGTACCTGTCT 59.992 52.381 0.00 0.00 37.43 3.41
2907 3017 1.410882 GGATGCTGGAGTACCTGTCTC 59.589 57.143 0.00 0.00 37.43 3.36
2912 3022 2.903404 GGAGTACCTGTCTCCTGGG 58.097 63.158 4.91 0.00 45.56 4.45
2913 3023 0.688087 GGAGTACCTGTCTCCTGGGG 60.688 65.000 4.91 0.00 45.56 4.96
2914 3024 1.306226 AGTACCTGTCTCCTGGGGC 60.306 63.158 0.00 0.00 34.13 5.80
2915 3025 1.306226 GTACCTGTCTCCTGGGGCT 60.306 63.158 0.00 0.00 34.13 5.19
2916 3026 0.032416 GTACCTGTCTCCTGGGGCTA 60.032 60.000 0.00 0.00 34.13 3.93
2917 3027 0.941963 TACCTGTCTCCTGGGGCTAT 59.058 55.000 0.00 0.00 34.13 2.97
2918 3028 0.941963 ACCTGTCTCCTGGGGCTATA 59.058 55.000 0.00 0.00 34.13 1.31
2919 3029 1.509961 ACCTGTCTCCTGGGGCTATAT 59.490 52.381 0.00 0.00 34.13 0.86
2920 3030 1.905215 CCTGTCTCCTGGGGCTATATG 59.095 57.143 0.00 0.00 0.00 1.78
2921 3031 1.277557 CTGTCTCCTGGGGCTATATGC 59.722 57.143 0.00 0.00 41.94 3.14
2922 3032 1.352083 GTCTCCTGGGGCTATATGCA 58.648 55.000 0.00 0.00 45.15 3.96
2923 3033 1.277557 GTCTCCTGGGGCTATATGCAG 59.722 57.143 0.00 0.00 45.15 4.41
2924 3034 0.035630 CTCCTGGGGCTATATGCAGC 60.036 60.000 0.00 0.00 45.15 5.25
2931 3041 2.157421 GCTATATGCAGCCTCGCAC 58.843 57.895 0.00 0.00 46.56 5.34
2932 3042 0.601046 GCTATATGCAGCCTCGCACA 60.601 55.000 0.00 0.00 46.56 4.57
2933 3043 1.143305 CTATATGCAGCCTCGCACAC 58.857 55.000 0.00 0.00 46.56 3.82
2934 3044 0.249868 TATATGCAGCCTCGCACACC 60.250 55.000 0.00 0.00 46.56 4.16
2935 3045 2.947938 ATATGCAGCCTCGCACACCC 62.948 60.000 0.00 0.00 46.56 4.61
2938 3048 4.335647 CAGCCTCGCACACCCCTT 62.336 66.667 0.00 0.00 0.00 3.95
2939 3049 4.335647 AGCCTCGCACACCCCTTG 62.336 66.667 0.00 0.00 0.00 3.61
2941 3051 4.641645 CCTCGCACACCCCTTGCA 62.642 66.667 0.00 0.00 40.20 4.08
2942 3052 2.360350 CTCGCACACCCCTTGCAT 60.360 61.111 0.00 0.00 40.20 3.96
2943 3053 1.973281 CTCGCACACCCCTTGCATT 60.973 57.895 0.00 0.00 40.20 3.56
2944 3054 2.203972 CTCGCACACCCCTTGCATTG 62.204 60.000 0.00 0.00 40.20 2.82
2945 3055 2.563798 CGCACACCCCTTGCATTGT 61.564 57.895 0.00 0.00 40.20 2.71
2946 3056 1.290009 GCACACCCCTTGCATTGTC 59.710 57.895 0.00 0.00 39.93 3.18
2947 3057 1.966762 CACACCCCTTGCATTGTCC 59.033 57.895 0.00 0.00 0.00 4.02
2948 3058 1.603455 ACACCCCTTGCATTGTCCG 60.603 57.895 0.00 0.00 0.00 4.79
2949 3059 1.303236 CACCCCTTGCATTGTCCGA 60.303 57.895 0.00 0.00 0.00 4.55
2950 3060 0.680921 CACCCCTTGCATTGTCCGAT 60.681 55.000 0.00 0.00 0.00 4.18
2951 3061 0.394352 ACCCCTTGCATTGTCCGATC 60.394 55.000 0.00 0.00 0.00 3.69
2952 3062 1.439353 CCCCTTGCATTGTCCGATCG 61.439 60.000 8.51 8.51 0.00 3.69
2953 3063 0.461870 CCCTTGCATTGTCCGATCGA 60.462 55.000 18.66 0.00 0.00 3.59
2954 3064 0.933097 CCTTGCATTGTCCGATCGAG 59.067 55.000 18.66 6.99 0.00 4.04
2955 3065 1.645034 CTTGCATTGTCCGATCGAGT 58.355 50.000 18.66 0.00 0.00 4.18
2956 3066 1.590238 CTTGCATTGTCCGATCGAGTC 59.410 52.381 18.66 6.93 0.00 3.36
2964 3074 2.577112 CGATCGAGTCGTTGCGCT 60.577 61.111 10.26 0.00 45.19 5.92
2965 3075 2.560151 CGATCGAGTCGTTGCGCTC 61.560 63.158 10.26 0.35 45.19 5.03
2966 3076 2.202623 ATCGAGTCGTTGCGCTCC 60.203 61.111 13.12 0.00 30.64 4.70
2967 3077 3.701604 ATCGAGTCGTTGCGCTCCC 62.702 63.158 13.12 0.00 30.64 4.30
2968 3078 4.421479 CGAGTCGTTGCGCTCCCT 62.421 66.667 9.73 0.00 30.64 4.20
2969 3079 2.048127 GAGTCGTTGCGCTCCCTT 60.048 61.111 9.73 0.00 0.00 3.95
2970 3080 2.048127 AGTCGTTGCGCTCCCTTC 60.048 61.111 9.73 0.00 0.00 3.46
2971 3081 2.048127 GTCGTTGCGCTCCCTTCT 60.048 61.111 9.73 0.00 0.00 2.85
2972 3082 2.095252 GTCGTTGCGCTCCCTTCTC 61.095 63.158 9.73 0.00 0.00 2.87
2973 3083 2.815647 CGTTGCGCTCCCTTCTCC 60.816 66.667 9.73 0.00 0.00 3.71
2974 3084 2.665603 GTTGCGCTCCCTTCTCCT 59.334 61.111 9.73 0.00 0.00 3.69
2975 3085 1.003233 GTTGCGCTCCCTTCTCCTT 60.003 57.895 9.73 0.00 0.00 3.36
2976 3086 1.003355 TTGCGCTCCCTTCTCCTTG 60.003 57.895 9.73 0.00 0.00 3.61
2977 3087 1.768684 TTGCGCTCCCTTCTCCTTGT 61.769 55.000 9.73 0.00 0.00 3.16
2978 3088 0.902984 TGCGCTCCCTTCTCCTTGTA 60.903 55.000 9.73 0.00 0.00 2.41
2979 3089 0.466124 GCGCTCCCTTCTCCTTGTAT 59.534 55.000 0.00 0.00 0.00 2.29
2980 3090 1.539280 GCGCTCCCTTCTCCTTGTATC 60.539 57.143 0.00 0.00 0.00 2.24
2981 3091 1.069358 CGCTCCCTTCTCCTTGTATCC 59.931 57.143 0.00 0.00 0.00 2.59
2982 3092 1.069358 GCTCCCTTCTCCTTGTATCCG 59.931 57.143 0.00 0.00 0.00 4.18
2983 3093 1.069358 CTCCCTTCTCCTTGTATCCGC 59.931 57.143 0.00 0.00 0.00 5.54
2984 3094 1.123928 CCCTTCTCCTTGTATCCGCT 58.876 55.000 0.00 0.00 0.00 5.52
2985 3095 1.486726 CCCTTCTCCTTGTATCCGCTT 59.513 52.381 0.00 0.00 0.00 4.68
2986 3096 2.483889 CCCTTCTCCTTGTATCCGCTTC 60.484 54.545 0.00 0.00 0.00 3.86
2987 3097 2.168521 CCTTCTCCTTGTATCCGCTTCA 59.831 50.000 0.00 0.00 0.00 3.02
2988 3098 3.452474 CTTCTCCTTGTATCCGCTTCAG 58.548 50.000 0.00 0.00 0.00 3.02
2989 3099 2.735151 TCTCCTTGTATCCGCTTCAGA 58.265 47.619 0.00 0.00 0.00 3.27
2990 3100 2.690497 TCTCCTTGTATCCGCTTCAGAG 59.310 50.000 0.00 0.00 0.00 3.35
2991 3101 1.757118 TCCTTGTATCCGCTTCAGAGG 59.243 52.381 0.00 0.00 36.25 3.69
2992 3102 1.482593 CCTTGTATCCGCTTCAGAGGT 59.517 52.381 0.00 0.00 36.33 3.85
2993 3103 2.093447 CCTTGTATCCGCTTCAGAGGTT 60.093 50.000 0.00 0.00 36.33 3.50
2994 3104 2.961526 TGTATCCGCTTCAGAGGTTC 57.038 50.000 0.00 0.00 36.33 3.62
2995 3105 2.176045 TGTATCCGCTTCAGAGGTTCA 58.824 47.619 0.00 0.00 36.33 3.18
2996 3106 2.766263 TGTATCCGCTTCAGAGGTTCAT 59.234 45.455 0.00 0.00 36.33 2.57
2997 3107 2.322355 ATCCGCTTCAGAGGTTCATG 57.678 50.000 0.00 0.00 36.33 3.07
2998 3108 1.266178 TCCGCTTCAGAGGTTCATGA 58.734 50.000 0.00 0.00 36.33 3.07
2999 3109 1.066858 TCCGCTTCAGAGGTTCATGAC 60.067 52.381 0.00 0.00 36.33 3.06
3000 3110 1.066573 CCGCTTCAGAGGTTCATGACT 60.067 52.381 0.00 0.00 0.00 3.41
3001 3111 2.613977 CCGCTTCAGAGGTTCATGACTT 60.614 50.000 0.00 0.00 0.00 3.01
3002 3112 2.414481 CGCTTCAGAGGTTCATGACTTG 59.586 50.000 0.00 0.00 0.00 3.16
3003 3113 3.406764 GCTTCAGAGGTTCATGACTTGT 58.593 45.455 0.00 0.00 0.00 3.16
3004 3114 3.188048 GCTTCAGAGGTTCATGACTTGTG 59.812 47.826 0.00 0.00 30.88 3.33
3005 3115 3.407424 TCAGAGGTTCATGACTTGTGG 57.593 47.619 0.00 0.00 30.65 4.17
3006 3116 2.038952 TCAGAGGTTCATGACTTGTGGG 59.961 50.000 0.00 0.00 30.65 4.61
3007 3117 2.038952 CAGAGGTTCATGACTTGTGGGA 59.961 50.000 0.00 0.00 0.00 4.37
3008 3118 2.039084 AGAGGTTCATGACTTGTGGGAC 59.961 50.000 0.00 0.00 0.00 4.46
3009 3119 1.156736 GGTTCATGACTTGTGGGACG 58.843 55.000 0.00 0.00 0.00 4.79
3010 3120 1.542547 GGTTCATGACTTGTGGGACGT 60.543 52.381 0.00 0.00 0.00 4.34
3011 3121 1.531149 GTTCATGACTTGTGGGACGTG 59.469 52.381 0.00 0.00 0.00 4.49
3012 3122 0.034756 TCATGACTTGTGGGACGTGG 59.965 55.000 0.00 0.00 0.00 4.94
3013 3123 1.302511 ATGACTTGTGGGACGTGGC 60.303 57.895 0.00 0.00 0.00 5.01
3014 3124 2.668550 GACTTGTGGGACGTGGCC 60.669 66.667 0.00 0.00 0.00 5.36
3015 3125 4.619227 ACTTGTGGGACGTGGCCG 62.619 66.667 0.00 0.00 40.83 6.13
3061 3171 4.514569 CGTGGCCGTTGCGTATGC 62.515 66.667 0.00 0.00 43.20 3.14
3076 3186 3.762293 TGCGCTTTCTGCATTGGT 58.238 50.000 9.73 0.00 43.06 3.67
3077 3187 1.286570 TGCGCTTTCTGCATTGGTG 59.713 52.632 9.73 0.00 43.06 4.17
3078 3188 1.444895 GCGCTTTCTGCATTGGTGG 60.445 57.895 0.00 0.00 43.06 4.61
3079 3189 1.213537 CGCTTTCTGCATTGGTGGG 59.786 57.895 0.00 0.00 43.06 4.61
3080 3190 1.593265 GCTTTCTGCATTGGTGGGG 59.407 57.895 0.00 0.00 42.31 4.96
3081 3191 1.187567 GCTTTCTGCATTGGTGGGGT 61.188 55.000 0.00 0.00 42.31 4.95
3082 3192 0.604578 CTTTCTGCATTGGTGGGGTG 59.395 55.000 0.00 0.00 0.00 4.61
3083 3193 0.831288 TTTCTGCATTGGTGGGGTGG 60.831 55.000 0.00 0.00 0.00 4.61
3084 3194 3.384532 CTGCATTGGTGGGGTGGC 61.385 66.667 0.00 0.00 0.00 5.01
3087 3197 2.600173 CATTGGTGGGGTGGCGTT 60.600 61.111 0.00 0.00 0.00 4.84
3088 3198 2.600173 ATTGGTGGGGTGGCGTTG 60.600 61.111 0.00 0.00 0.00 4.10
3089 3199 4.904590 TTGGTGGGGTGGCGTTGG 62.905 66.667 0.00 0.00 0.00 3.77
3098 3208 3.862142 TGGCGTTGGGCATTTTCA 58.138 50.000 0.00 0.00 44.78 2.69
3099 3209 1.365633 TGGCGTTGGGCATTTTCAC 59.634 52.632 0.00 0.00 44.78 3.18
3100 3210 1.112315 TGGCGTTGGGCATTTTCACT 61.112 50.000 0.00 0.00 44.78 3.41
3101 3211 0.033366 GGCGTTGGGCATTTTCACTT 59.967 50.000 0.00 0.00 46.16 3.16
3102 3212 1.139163 GCGTTGGGCATTTTCACTTG 58.861 50.000 0.00 0.00 42.87 3.16
3103 3213 1.537990 GCGTTGGGCATTTTCACTTGT 60.538 47.619 0.00 0.00 42.87 3.16
3104 3214 2.820330 CGTTGGGCATTTTCACTTGTT 58.180 42.857 0.00 0.00 0.00 2.83
3105 3215 2.539274 CGTTGGGCATTTTCACTTGTTG 59.461 45.455 0.00 0.00 0.00 3.33
3106 3216 3.736433 CGTTGGGCATTTTCACTTGTTGA 60.736 43.478 0.00 0.00 0.00 3.18
3107 3217 4.187694 GTTGGGCATTTTCACTTGTTGAA 58.812 39.130 0.00 0.00 42.83 2.69
3108 3218 3.791245 TGGGCATTTTCACTTGTTGAAC 58.209 40.909 0.00 0.00 44.28 3.18
3109 3219 2.794350 GGGCATTTTCACTTGTTGAACG 59.206 45.455 0.00 0.00 44.28 3.95
3110 3220 2.218530 GGCATTTTCACTTGTTGAACGC 59.781 45.455 0.00 0.00 44.28 4.84
3111 3221 2.218530 GCATTTTCACTTGTTGAACGCC 59.781 45.455 0.00 0.00 44.28 5.68
3112 3222 2.181426 TTTTCACTTGTTGAACGCCG 57.819 45.000 0.00 0.00 44.28 6.46
3113 3223 0.248296 TTTCACTTGTTGAACGCCGC 60.248 50.000 0.00 0.00 44.28 6.53
3114 3224 1.369839 TTCACTTGTTGAACGCCGCA 61.370 50.000 0.00 0.00 39.45 5.69
3115 3225 1.163420 TCACTTGTTGAACGCCGCAT 61.163 50.000 0.00 0.00 0.00 4.73
3116 3226 0.998226 CACTTGTTGAACGCCGCATG 60.998 55.000 0.00 0.00 0.00 4.06
3117 3227 1.163420 ACTTGTTGAACGCCGCATGA 61.163 50.000 0.00 0.00 0.00 3.07
3118 3228 0.168788 CTTGTTGAACGCCGCATGAT 59.831 50.000 0.00 0.00 0.00 2.45
3119 3229 0.167908 TTGTTGAACGCCGCATGATC 59.832 50.000 0.00 0.00 0.00 2.92
3120 3230 0.952984 TGTTGAACGCCGCATGATCA 60.953 50.000 0.00 0.00 0.00 2.92
3121 3231 0.521242 GTTGAACGCCGCATGATCAC 60.521 55.000 0.00 0.00 0.00 3.06
3122 3232 1.643868 TTGAACGCCGCATGATCACC 61.644 55.000 0.00 0.00 0.00 4.02
3123 3233 2.823829 GAACGCCGCATGATCACCC 61.824 63.158 0.00 0.00 0.00 4.61
3124 3234 3.329542 AACGCCGCATGATCACCCT 62.330 57.895 0.00 0.00 0.00 4.34
3125 3235 2.969238 CGCCGCATGATCACCCTC 60.969 66.667 0.00 0.00 0.00 4.30
3126 3236 2.592861 GCCGCATGATCACCCTCC 60.593 66.667 0.00 0.00 0.00 4.30
3127 3237 3.112205 GCCGCATGATCACCCTCCT 62.112 63.158 0.00 0.00 0.00 3.69
3128 3238 1.528824 CCGCATGATCACCCTCCTT 59.471 57.895 0.00 0.00 0.00 3.36
3129 3239 0.107017 CCGCATGATCACCCTCCTTT 60.107 55.000 0.00 0.00 0.00 3.11
3130 3240 1.683011 CCGCATGATCACCCTCCTTTT 60.683 52.381 0.00 0.00 0.00 2.27
3131 3241 2.094675 CGCATGATCACCCTCCTTTTT 58.905 47.619 0.00 0.00 0.00 1.94
3132 3242 2.159338 CGCATGATCACCCTCCTTTTTG 60.159 50.000 0.00 0.00 0.00 2.44
3133 3243 2.827921 GCATGATCACCCTCCTTTTTGT 59.172 45.455 0.00 0.00 0.00 2.83
3134 3244 3.119352 GCATGATCACCCTCCTTTTTGTC 60.119 47.826 0.00 0.00 0.00 3.18
3135 3245 4.338879 CATGATCACCCTCCTTTTTGTCT 58.661 43.478 0.00 0.00 0.00 3.41
3136 3246 5.500234 CATGATCACCCTCCTTTTTGTCTA 58.500 41.667 0.00 0.00 0.00 2.59
3137 3247 4.906618 TGATCACCCTCCTTTTTGTCTAC 58.093 43.478 0.00 0.00 0.00 2.59
3138 3248 4.597507 TGATCACCCTCCTTTTTGTCTACT 59.402 41.667 0.00 0.00 0.00 2.57
3139 3249 5.073144 TGATCACCCTCCTTTTTGTCTACTT 59.927 40.000 0.00 0.00 0.00 2.24
3140 3250 4.969484 TCACCCTCCTTTTTGTCTACTTC 58.031 43.478 0.00 0.00 0.00 3.01
3141 3251 4.658901 TCACCCTCCTTTTTGTCTACTTCT 59.341 41.667 0.00 0.00 0.00 2.85
3142 3252 4.998033 CACCCTCCTTTTTGTCTACTTCTC 59.002 45.833 0.00 0.00 0.00 2.87
3143 3253 4.908481 ACCCTCCTTTTTGTCTACTTCTCT 59.092 41.667 0.00 0.00 0.00 3.10
3144 3254 5.221742 ACCCTCCTTTTTGTCTACTTCTCTG 60.222 44.000 0.00 0.00 0.00 3.35
3145 3255 5.221742 CCCTCCTTTTTGTCTACTTCTCTGT 60.222 44.000 0.00 0.00 0.00 3.41
3146 3256 6.292150 CCTCCTTTTTGTCTACTTCTCTGTT 58.708 40.000 0.00 0.00 0.00 3.16
3147 3257 6.203723 CCTCCTTTTTGTCTACTTCTCTGTTG 59.796 42.308 0.00 0.00 0.00 3.33
3148 3258 6.055588 TCCTTTTTGTCTACTTCTCTGTTGG 58.944 40.000 0.00 0.00 0.00 3.77
3149 3259 5.239525 CCTTTTTGTCTACTTCTCTGTTGGG 59.760 44.000 0.00 0.00 0.00 4.12
3150 3260 5.367945 TTTTGTCTACTTCTCTGTTGGGT 57.632 39.130 0.00 0.00 0.00 4.51
3151 3261 4.602340 TTGTCTACTTCTCTGTTGGGTC 57.398 45.455 0.00 0.00 0.00 4.46
3152 3262 2.897969 TGTCTACTTCTCTGTTGGGTCC 59.102 50.000 0.00 0.00 0.00 4.46
3153 3263 2.234168 GTCTACTTCTCTGTTGGGTCCC 59.766 54.545 0.00 0.00 0.00 4.46
3154 3264 1.204941 CTACTTCTCTGTTGGGTCCCG 59.795 57.143 2.65 0.00 0.00 5.14
3155 3265 0.471211 ACTTCTCTGTTGGGTCCCGA 60.471 55.000 2.65 0.00 0.00 5.14
3156 3266 0.037232 CTTCTCTGTTGGGTCCCGAC 60.037 60.000 20.48 20.48 38.36 4.79
3157 3267 0.471211 TTCTCTGTTGGGTCCCGACT 60.471 55.000 26.15 0.00 38.66 4.18
3158 3268 1.185618 TCTCTGTTGGGTCCCGACTG 61.186 60.000 26.15 24.80 38.66 3.51
3159 3269 2.172483 CTCTGTTGGGTCCCGACTGG 62.172 65.000 27.04 19.83 38.66 4.00
3160 3270 2.446994 TGTTGGGTCCCGACTGGT 60.447 61.111 26.15 0.00 38.66 4.00
3161 3271 2.346365 GTTGGGTCCCGACTGGTC 59.654 66.667 20.07 0.00 35.15 4.02
3162 3272 2.203182 TTGGGTCCCGACTGGTCT 59.797 61.111 2.65 0.00 34.77 3.85
3163 3273 0.901580 GTTGGGTCCCGACTGGTCTA 60.902 60.000 20.07 0.00 35.15 2.59
3164 3274 0.901580 TTGGGTCCCGACTGGTCTAC 60.902 60.000 2.65 0.00 34.77 2.59
3165 3275 1.000107 GGGTCCCGACTGGTCTACT 60.000 63.158 0.00 0.00 34.77 2.57
3166 3276 1.036481 GGGTCCCGACTGGTCTACTC 61.036 65.000 0.00 0.00 34.77 2.59
3167 3277 1.375098 GGTCCCGACTGGTCTACTCG 61.375 65.000 0.00 0.00 34.77 4.18
3168 3278 1.077930 TCCCGACTGGTCTACTCGG 60.078 63.158 0.00 0.00 45.49 4.63
3169 3279 2.772691 CCCGACTGGTCTACTCGGC 61.773 68.421 0.00 0.00 44.71 5.54
3170 3280 2.044555 CCGACTGGTCTACTCGGCA 61.045 63.158 0.00 0.00 40.52 5.69
3171 3281 1.429825 CGACTGGTCTACTCGGCAG 59.570 63.158 0.00 0.00 0.00 4.85
3172 3282 1.306642 CGACTGGTCTACTCGGCAGT 61.307 60.000 0.00 0.00 36.55 4.40
3173 3283 0.889306 GACTGGTCTACTCGGCAGTT 59.111 55.000 0.00 0.00 33.62 3.16
3174 3284 0.889306 ACTGGTCTACTCGGCAGTTC 59.111 55.000 0.00 0.00 33.62 3.01
3175 3285 0.179161 CTGGTCTACTCGGCAGTTCG 60.179 60.000 0.00 0.00 33.62 3.95
3176 3286 1.139095 GGTCTACTCGGCAGTTCGG 59.861 63.158 0.00 0.00 33.62 4.30
3177 3287 1.593296 GGTCTACTCGGCAGTTCGGT 61.593 60.000 0.00 0.00 33.62 4.69
3178 3288 0.179169 GTCTACTCGGCAGTTCGGTC 60.179 60.000 0.00 0.00 33.62 4.79
3179 3289 0.322277 TCTACTCGGCAGTTCGGTCT 60.322 55.000 0.00 0.00 33.62 3.85
3180 3290 0.099082 CTACTCGGCAGTTCGGTCTC 59.901 60.000 0.00 0.00 33.62 3.36
3181 3291 1.642037 TACTCGGCAGTTCGGTCTCG 61.642 60.000 0.00 0.00 33.62 4.04
3182 3292 2.979197 CTCGGCAGTTCGGTCTCGT 61.979 63.158 0.00 0.00 37.69 4.18
3183 3293 2.504244 CGGCAGTTCGGTCTCGTC 60.504 66.667 0.00 0.00 37.69 4.20
3184 3294 2.504244 GGCAGTTCGGTCTCGTCG 60.504 66.667 0.00 0.00 37.69 5.12
3185 3295 3.173240 GCAGTTCGGTCTCGTCGC 61.173 66.667 0.00 0.00 37.69 5.19
3186 3296 2.870161 CAGTTCGGTCTCGTCGCG 60.870 66.667 0.00 0.00 37.69 5.87
3187 3297 3.046087 AGTTCGGTCTCGTCGCGA 61.046 61.111 3.71 3.71 37.69 5.87
3188 3298 2.868787 GTTCGGTCTCGTCGCGAC 60.869 66.667 28.96 28.96 37.69 5.19
3189 3299 3.348205 TTCGGTCTCGTCGCGACA 61.348 61.111 35.71 22.35 37.69 4.35
3190 3300 3.304764 TTCGGTCTCGTCGCGACAG 62.305 63.158 35.71 29.02 37.69 3.51
3202 3312 4.147449 CGACAGCGCATCCCCTGA 62.147 66.667 11.47 0.00 33.40 3.86
3203 3313 2.507944 GACAGCGCATCCCCTGAT 59.492 61.111 11.47 0.00 33.40 2.90
3204 3314 1.748403 GACAGCGCATCCCCTGATA 59.252 57.895 11.47 0.00 33.40 2.15
3205 3315 0.320247 GACAGCGCATCCCCTGATAG 60.320 60.000 11.47 0.00 33.40 2.08
3206 3316 1.004080 CAGCGCATCCCCTGATAGG 60.004 63.158 11.47 0.00 34.30 2.57
3207 3317 2.359230 GCGCATCCCCTGATAGGC 60.359 66.667 0.30 0.00 32.73 3.93
3208 3318 2.047844 CGCATCCCCTGATAGGCG 60.048 66.667 0.00 0.00 37.16 5.52
3209 3319 2.872388 CGCATCCCCTGATAGGCGT 61.872 63.158 0.00 0.00 38.13 5.68
3210 3320 1.302033 GCATCCCCTGATAGGCGTG 60.302 63.158 0.00 0.00 32.73 5.34
3211 3321 2.044806 GCATCCCCTGATAGGCGTGT 62.045 60.000 0.00 0.00 32.73 4.49
3212 3322 0.469917 CATCCCCTGATAGGCGTGTT 59.530 55.000 0.00 0.00 32.73 3.32
3213 3323 1.134098 CATCCCCTGATAGGCGTGTTT 60.134 52.381 0.00 0.00 32.73 2.83
3214 3324 0.539986 TCCCCTGATAGGCGTGTTTC 59.460 55.000 0.00 0.00 32.73 2.78
3215 3325 0.251916 CCCCTGATAGGCGTGTTTCA 59.748 55.000 0.00 0.00 32.73 2.69
3216 3326 1.656652 CCCTGATAGGCGTGTTTCAG 58.343 55.000 8.17 8.17 36.26 3.02
3217 3327 1.656652 CCTGATAGGCGTGTTTCAGG 58.343 55.000 15.78 15.78 46.66 3.86
3218 3328 1.656652 CTGATAGGCGTGTTTCAGGG 58.343 55.000 7.54 0.00 33.54 4.45
3219 3329 0.981183 TGATAGGCGTGTTTCAGGGT 59.019 50.000 0.00 0.00 0.00 4.34
3220 3330 1.338674 TGATAGGCGTGTTTCAGGGTG 60.339 52.381 0.00 0.00 0.00 4.61
3221 3331 0.690762 ATAGGCGTGTTTCAGGGTGT 59.309 50.000 0.00 0.00 0.00 4.16
3222 3332 0.250124 TAGGCGTGTTTCAGGGTGTG 60.250 55.000 0.00 0.00 0.00 3.82
3223 3333 2.331451 GCGTGTTTCAGGGTGTGC 59.669 61.111 0.00 0.00 0.00 4.57
3224 3334 2.631428 CGTGTTTCAGGGTGTGCG 59.369 61.111 0.00 0.00 0.00 5.34
3225 3335 2.177580 CGTGTTTCAGGGTGTGCGT 61.178 57.895 0.00 0.00 0.00 5.24
3226 3336 1.355210 GTGTTTCAGGGTGTGCGTG 59.645 57.895 0.00 0.00 0.00 5.34
3227 3337 1.078072 TGTTTCAGGGTGTGCGTGT 60.078 52.632 0.00 0.00 0.00 4.49
3228 3338 1.092921 TGTTTCAGGGTGTGCGTGTC 61.093 55.000 0.00 0.00 0.00 3.67
3229 3339 0.814010 GTTTCAGGGTGTGCGTGTCT 60.814 55.000 0.00 0.00 0.00 3.41
3230 3340 0.753867 TTTCAGGGTGTGCGTGTCTA 59.246 50.000 0.00 0.00 0.00 2.59
3231 3341 0.032952 TTCAGGGTGTGCGTGTCTAC 59.967 55.000 0.00 0.00 0.00 2.59
3232 3342 1.374252 CAGGGTGTGCGTGTCTACC 60.374 63.158 0.00 0.00 0.00 3.18
3233 3343 2.047560 GGGTGTGCGTGTCTACCC 60.048 66.667 0.00 0.00 45.32 3.69
3234 3344 2.431942 GGTGTGCGTGTCTACCCG 60.432 66.667 0.00 0.00 0.00 5.28
3235 3345 2.431942 GTGTGCGTGTCTACCCGG 60.432 66.667 0.00 0.00 0.00 5.73
3236 3346 4.367023 TGTGCGTGTCTACCCGGC 62.367 66.667 0.00 0.00 0.00 6.13
3237 3347 4.065281 GTGCGTGTCTACCCGGCT 62.065 66.667 0.00 0.00 0.00 5.52
3238 3348 2.361483 TGCGTGTCTACCCGGCTA 60.361 61.111 0.00 0.00 0.00 3.93
3239 3349 2.103736 GCGTGTCTACCCGGCTAC 59.896 66.667 0.00 0.00 0.00 3.58
3240 3350 2.413142 GCGTGTCTACCCGGCTACT 61.413 63.158 0.00 0.00 0.00 2.57
3241 3351 1.432251 CGTGTCTACCCGGCTACTG 59.568 63.158 0.00 0.00 0.00 2.74
3242 3352 1.028330 CGTGTCTACCCGGCTACTGA 61.028 60.000 0.00 0.00 0.00 3.41
3243 3353 1.180029 GTGTCTACCCGGCTACTGAA 58.820 55.000 0.00 0.00 0.00 3.02
3244 3354 1.135170 GTGTCTACCCGGCTACTGAAC 60.135 57.143 0.00 0.00 0.00 3.18
3245 3355 0.459078 GTCTACCCGGCTACTGAACC 59.541 60.000 0.00 0.00 0.00 3.62
3246 3356 0.685458 TCTACCCGGCTACTGAACCC 60.685 60.000 0.00 0.00 0.00 4.11
3247 3357 1.683418 CTACCCGGCTACTGAACCCC 61.683 65.000 0.00 0.00 0.00 4.95
3248 3358 4.157120 CCCGGCTACTGAACCCCG 62.157 72.222 0.00 0.00 40.39 5.73
3249 3359 4.832608 CCGGCTACTGAACCCCGC 62.833 72.222 0.00 0.00 39.42 6.13
3250 3360 4.832608 CGGCTACTGAACCCCGCC 62.833 72.222 0.00 0.00 37.40 6.13
3251 3361 3.400054 GGCTACTGAACCCCGCCT 61.400 66.667 0.00 0.00 37.76 5.52
3252 3362 2.062177 GGCTACTGAACCCCGCCTA 61.062 63.158 0.00 0.00 37.76 3.93
3253 3363 1.408453 GGCTACTGAACCCCGCCTAT 61.408 60.000 0.00 0.00 37.76 2.57
3254 3364 0.468648 GCTACTGAACCCCGCCTATT 59.531 55.000 0.00 0.00 0.00 1.73
3255 3365 1.134189 GCTACTGAACCCCGCCTATTT 60.134 52.381 0.00 0.00 0.00 1.40
3256 3366 2.561569 CTACTGAACCCCGCCTATTTG 58.438 52.381 0.00 0.00 0.00 2.32
3257 3367 0.988832 ACTGAACCCCGCCTATTTGA 59.011 50.000 0.00 0.00 0.00 2.69
3258 3368 1.564348 ACTGAACCCCGCCTATTTGAT 59.436 47.619 0.00 0.00 0.00 2.57
3259 3369 2.775384 ACTGAACCCCGCCTATTTGATA 59.225 45.455 0.00 0.00 0.00 2.15
3260 3370 3.181454 ACTGAACCCCGCCTATTTGATAG 60.181 47.826 0.00 0.00 0.00 2.08
3275 3385 6.679327 ATTTGATAGGGAAACGTTTAGAGC 57.321 37.500 14.65 0.82 0.00 4.09
3276 3386 4.133013 TGATAGGGAAACGTTTAGAGCC 57.867 45.455 14.65 10.65 0.00 4.70
3277 3387 2.660189 TAGGGAAACGTTTAGAGCCG 57.340 50.000 14.65 0.00 0.00 5.52
3278 3388 0.036671 AGGGAAACGTTTAGAGCCGG 60.037 55.000 14.65 0.00 0.00 6.13
3279 3389 0.321034 GGGAAACGTTTAGAGCCGGT 60.321 55.000 14.65 0.00 0.00 5.28
3280 3390 1.073964 GGAAACGTTTAGAGCCGGTC 58.926 55.000 14.65 0.00 0.00 4.79
3281 3391 1.606224 GGAAACGTTTAGAGCCGGTCA 60.606 52.381 14.65 0.00 0.00 4.02
3282 3392 2.137523 GAAACGTTTAGAGCCGGTCAA 58.862 47.619 14.65 0.00 0.00 3.18
3283 3393 1.505425 AACGTTTAGAGCCGGTCAAC 58.495 50.000 1.90 0.78 0.00 3.18
3284 3394 0.320160 ACGTTTAGAGCCGGTCAACC 60.320 55.000 1.90 0.00 0.00 3.77
3295 3405 3.284449 GTCAACCGGCCAAGCGTT 61.284 61.111 0.00 0.00 0.00 4.84
3296 3406 2.975799 TCAACCGGCCAAGCGTTC 60.976 61.111 0.00 0.00 0.00 3.95
3297 3407 4.383602 CAACCGGCCAAGCGTTCG 62.384 66.667 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 154 1.508808 CTCTCGGTAGGGTAGCTCGC 61.509 65.000 0.00 0.00 0.00 5.03
148 164 2.054140 GACTGCCTCGCTCTCGGTAG 62.054 65.000 0.00 0.00 38.74 3.18
149 165 2.045242 ACTGCCTCGCTCTCGGTA 60.045 61.111 0.00 0.00 36.13 4.02
150 166 3.444805 GACTGCCTCGCTCTCGGT 61.445 66.667 0.00 0.00 36.13 4.69
151 167 4.200283 GGACTGCCTCGCTCTCGG 62.200 72.222 0.00 0.00 36.13 4.63
152 168 2.880719 CTTGGACTGCCTCGCTCTCG 62.881 65.000 0.00 0.00 34.31 4.04
153 169 1.153667 CTTGGACTGCCTCGCTCTC 60.154 63.158 0.00 0.00 34.31 3.20
154 170 2.977178 CTTGGACTGCCTCGCTCT 59.023 61.111 0.00 0.00 34.31 4.09
155 171 2.817396 GCTTGGACTGCCTCGCTC 60.817 66.667 0.00 0.00 34.31 5.03
156 172 4.749310 CGCTTGGACTGCCTCGCT 62.749 66.667 0.00 0.00 34.31 4.93
158 174 3.997064 CTCCGCTTGGACTGCCTCG 62.997 68.421 0.00 0.00 36.65 4.63
162 178 3.123620 CTGCTCCGCTTGGACTGC 61.124 66.667 0.00 0.00 36.65 4.40
273 289 4.103103 CTCGGAGTGACGCGAGCA 62.103 66.667 15.93 7.89 34.56 4.26
342 373 2.480244 GGGCCAAATCGATTCAGAAAGC 60.480 50.000 11.83 8.06 0.00 3.51
361 392 3.559657 GATCCATCGGAGCGACGGG 62.560 68.421 0.00 0.00 39.80 5.28
451 491 1.324383 CCAACTACCAACCACCCAAC 58.676 55.000 0.00 0.00 0.00 3.77
452 492 0.927767 ACCAACTACCAACCACCCAA 59.072 50.000 0.00 0.00 0.00 4.12
453 493 1.420891 GTACCAACTACCAACCACCCA 59.579 52.381 0.00 0.00 0.00 4.51
454 494 1.608801 CGTACCAACTACCAACCACCC 60.609 57.143 0.00 0.00 0.00 4.61
495 544 2.658285 GGATGATCAAGCACCATGGAA 58.342 47.619 21.47 0.00 0.00 3.53
505 554 4.607293 TCCTACCAATCGGATGATCAAG 57.393 45.455 0.00 0.00 32.24 3.02
515 564 3.743396 GCAGCTAAAGATCCTACCAATCG 59.257 47.826 0.00 0.00 0.00 3.34
548 618 0.606401 CCTGACCAGCAACGGATGTT 60.606 55.000 0.00 0.00 39.43 2.71
552 622 2.741092 GACCTGACCAGCAACGGA 59.259 61.111 0.00 0.00 0.00 4.69
566 636 2.543238 GGGAACTCGTGTATCATCGACC 60.543 54.545 0.00 0.00 32.65 4.79
639 714 0.108138 GATTCACTGGTCACCCCGAG 60.108 60.000 0.00 0.00 35.15 4.63
706 781 9.152595 CACACATATATCAAGAGATTGATCCAG 57.847 37.037 6.74 0.53 41.50 3.86
829 912 3.252400 ACGCGTGATAACAAACGGATAA 58.748 40.909 12.93 0.00 40.12 1.75
908 996 3.508840 GATCAACGGCGCTTGGGG 61.509 66.667 6.90 0.00 0.00 4.96
909 997 1.586154 AAAGATCAACGGCGCTTGGG 61.586 55.000 6.90 0.00 0.00 4.12
912 1000 4.201881 GGTAATAAAAGATCAACGGCGCTT 60.202 41.667 6.90 0.00 0.00 4.68
913 1001 3.311596 GGTAATAAAAGATCAACGGCGCT 59.688 43.478 6.90 0.00 0.00 5.92
914 1002 3.614588 GGTAATAAAAGATCAACGGCGC 58.385 45.455 6.90 0.00 0.00 6.53
915 1003 3.552699 TCGGTAATAAAAGATCAACGGCG 59.447 43.478 4.80 4.80 0.00 6.46
916 1004 5.611844 CGATCGGTAATAAAAGATCAACGGC 60.612 44.000 7.38 0.00 39.39 5.68
917 1005 5.688621 TCGATCGGTAATAAAAGATCAACGG 59.311 40.000 16.41 0.00 39.39 4.44
918 1006 6.742999 TCGATCGGTAATAAAAGATCAACG 57.257 37.500 16.41 0.00 39.39 4.10
919 1007 9.931210 AATTTCGATCGGTAATAAAAGATCAAC 57.069 29.630 16.41 0.00 39.39 3.18
934 1022 5.790495 GTCTGTTTCTTCAAATTTCGATCGG 59.210 40.000 16.41 0.00 0.00 4.18
1032 1120 1.429021 CATTCCGGTGCCATTGTCG 59.571 57.895 0.00 0.00 0.00 4.35
1106 1197 3.549827 CGCTGAAATGTAACAACAGGCAA 60.550 43.478 0.00 0.00 0.00 4.52
1107 1198 2.031245 CGCTGAAATGTAACAACAGGCA 60.031 45.455 0.00 0.00 0.00 4.75
1108 1199 2.584791 CGCTGAAATGTAACAACAGGC 58.415 47.619 0.00 0.00 0.00 4.85
1109 1200 2.584791 GCGCTGAAATGTAACAACAGG 58.415 47.619 0.00 0.00 0.00 4.00
1111 1202 1.867865 TCGCGCTGAAATGTAACAACA 59.132 42.857 5.56 0.00 0.00 3.33
1113 1204 2.546368 AGTTCGCGCTGAAATGTAACAA 59.454 40.909 14.52 0.00 38.60 2.83
1114 1205 2.096466 CAGTTCGCGCTGAAATGTAACA 60.096 45.455 23.96 0.00 45.24 2.41
1115 1206 2.495939 CAGTTCGCGCTGAAATGTAAC 58.504 47.619 23.96 10.89 45.24 2.50
1116 1207 2.873170 CAGTTCGCGCTGAAATGTAA 57.127 45.000 23.96 1.16 45.24 2.41
1151 1248 1.959085 CCTGCAGTTTGGCACGAAT 59.041 52.632 13.81 0.00 39.25 3.34
1158 1255 4.974721 ACCCCGCCTGCAGTTTGG 62.975 66.667 13.81 10.85 0.00 3.28
1252 1349 2.514824 GCGTCCTTCTGGCCCATC 60.515 66.667 0.00 0.00 0.00 3.51
1474 1571 3.763897 TGAAGGTCTCGAACATGATCTGA 59.236 43.478 0.00 0.00 0.00 3.27
2005 2102 2.829384 GGAACCCCCACTGAGCACA 61.829 63.158 0.00 0.00 34.14 4.57
2203 2306 2.285827 ACGAGCAGTAACAGAGCATC 57.714 50.000 0.00 0.00 0.00 3.91
2235 2342 1.522569 GGGCACGCCATTAGTCTCT 59.477 57.895 10.83 0.00 37.98 3.10
2236 2343 1.883084 CGGGCACGCCATTAGTCTC 60.883 63.158 10.83 0.00 37.98 3.36
2237 2344 2.186903 CGGGCACGCCATTAGTCT 59.813 61.111 10.83 0.00 37.98 3.24
2240 2347 1.582610 AAACACGGGCACGCCATTAG 61.583 55.000 9.12 0.64 46.04 1.73
2253 2360 0.581529 ACATCTGCGACACAAACACG 59.418 50.000 0.00 0.00 0.00 4.49
2254 2361 1.334059 CCACATCTGCGACACAAACAC 60.334 52.381 0.00 0.00 0.00 3.32
2255 2362 0.943673 CCACATCTGCGACACAAACA 59.056 50.000 0.00 0.00 0.00 2.83
2256 2363 1.225855 TCCACATCTGCGACACAAAC 58.774 50.000 0.00 0.00 0.00 2.93
2348 2455 1.064003 ATGACAGGTACAGGTTGGCA 58.936 50.000 0.00 0.00 33.73 4.92
2349 2456 2.084546 GAATGACAGGTACAGGTTGGC 58.915 52.381 0.00 0.00 0.00 4.52
2393 2500 5.105797 GGAAACCATGACACATTCAAGCATA 60.106 40.000 0.00 0.00 37.92 3.14
2510 2617 1.843851 TGAACCCACTGAAACTGACCT 59.156 47.619 0.00 0.00 0.00 3.85
2570 2677 0.169672 GCACACGCATGAGCTGAATT 59.830 50.000 0.00 0.00 39.16 2.17
2634 2741 4.447138 AAGGTACAAGAATCAACACCCA 57.553 40.909 0.00 0.00 0.00 4.51
2665 2772 3.493699 CCAGGTAGTTCGACAAGAAACCA 60.494 47.826 5.02 0.00 40.53 3.67
2691 2798 5.916661 AGCTTCCTTCTACATACGAGAAA 57.083 39.130 0.00 0.00 32.64 2.52
2757 2867 4.226761 CTGATAACAAACGCAAACTTCCC 58.773 43.478 0.00 0.00 0.00 3.97
2766 2876 9.769093 ATATAAAAGACAACTGATAACAAACGC 57.231 29.630 0.00 0.00 0.00 4.84
2777 2887 9.745880 ATACGTACTCCATATAAAAGACAACTG 57.254 33.333 0.00 0.00 0.00 3.16
2778 2888 9.745880 CATACGTACTCCATATAAAAGACAACT 57.254 33.333 0.00 0.00 0.00 3.16
2784 2894 8.761497 CCACAACATACGTACTCCATATAAAAG 58.239 37.037 0.00 0.00 0.00 2.27
2785 2895 8.259411 ACCACAACATACGTACTCCATATAAAA 58.741 33.333 0.00 0.00 0.00 1.52
2786 2896 7.784037 ACCACAACATACGTACTCCATATAAA 58.216 34.615 0.00 0.00 0.00 1.40
2787 2897 7.350744 ACCACAACATACGTACTCCATATAA 57.649 36.000 0.00 0.00 0.00 0.98
2788 2898 6.964807 ACCACAACATACGTACTCCATATA 57.035 37.500 0.00 0.00 0.00 0.86
2789 2899 5.864418 ACCACAACATACGTACTCCATAT 57.136 39.130 0.00 0.00 0.00 1.78
2790 2900 6.772360 TTACCACAACATACGTACTCCATA 57.228 37.500 0.00 0.00 0.00 2.74
2791 2901 5.664294 TTACCACAACATACGTACTCCAT 57.336 39.130 0.00 0.00 0.00 3.41
2792 2902 5.465532 TTTACCACAACATACGTACTCCA 57.534 39.130 0.00 0.00 0.00 3.86
2793 2903 6.783892 TTTTTACCACAACATACGTACTCC 57.216 37.500 0.00 0.00 0.00 3.85
2814 2924 8.700973 ACCAACTACTCCATGTTTTATGTTTTT 58.299 29.630 0.00 0.00 0.00 1.94
2815 2925 8.245195 ACCAACTACTCCATGTTTTATGTTTT 57.755 30.769 0.00 0.00 0.00 2.43
2816 2926 7.833285 ACCAACTACTCCATGTTTTATGTTT 57.167 32.000 0.00 0.00 0.00 2.83
2817 2927 7.833285 AACCAACTACTCCATGTTTTATGTT 57.167 32.000 0.00 0.00 0.00 2.71
2818 2928 7.286775 ACAAACCAACTACTCCATGTTTTATGT 59.713 33.333 0.00 0.00 0.00 2.29
2819 2929 7.657336 ACAAACCAACTACTCCATGTTTTATG 58.343 34.615 0.00 0.00 0.00 1.90
2820 2930 7.833285 ACAAACCAACTACTCCATGTTTTAT 57.167 32.000 0.00 0.00 0.00 1.40
2821 2931 7.648039 AACAAACCAACTACTCCATGTTTTA 57.352 32.000 0.00 0.00 0.00 1.52
2822 2932 6.538945 AACAAACCAACTACTCCATGTTTT 57.461 33.333 0.00 0.00 0.00 2.43
2823 2933 6.238538 CGTAACAAACCAACTACTCCATGTTT 60.239 38.462 0.00 0.00 32.56 2.83
2824 2934 5.237779 CGTAACAAACCAACTACTCCATGTT 59.762 40.000 0.00 0.00 34.48 2.71
2825 2935 4.753107 CGTAACAAACCAACTACTCCATGT 59.247 41.667 0.00 0.00 0.00 3.21
2826 2936 4.992319 TCGTAACAAACCAACTACTCCATG 59.008 41.667 0.00 0.00 0.00 3.66
2827 2937 5.217978 TCGTAACAAACCAACTACTCCAT 57.782 39.130 0.00 0.00 0.00 3.41
2828 2938 4.669206 TCGTAACAAACCAACTACTCCA 57.331 40.909 0.00 0.00 0.00 3.86
2829 2939 5.930569 AGAATCGTAACAAACCAACTACTCC 59.069 40.000 0.00 0.00 0.00 3.85
2830 2940 7.201418 GCTAGAATCGTAACAAACCAACTACTC 60.201 40.741 0.00 0.00 0.00 2.59
2831 2941 6.589139 GCTAGAATCGTAACAAACCAACTACT 59.411 38.462 0.00 0.00 0.00 2.57
2832 2942 6.366877 TGCTAGAATCGTAACAAACCAACTAC 59.633 38.462 0.00 0.00 0.00 2.73
2833 2943 6.457355 TGCTAGAATCGTAACAAACCAACTA 58.543 36.000 0.00 0.00 0.00 2.24
2834 2944 5.302360 TGCTAGAATCGTAACAAACCAACT 58.698 37.500 0.00 0.00 0.00 3.16
2835 2945 5.600908 TGCTAGAATCGTAACAAACCAAC 57.399 39.130 0.00 0.00 0.00 3.77
2836 2946 5.334569 GCTTGCTAGAATCGTAACAAACCAA 60.335 40.000 0.00 0.00 0.00 3.67
2837 2947 4.153475 GCTTGCTAGAATCGTAACAAACCA 59.847 41.667 0.00 0.00 0.00 3.67
2838 2948 4.436986 GGCTTGCTAGAATCGTAACAAACC 60.437 45.833 0.00 0.00 0.00 3.27
2839 2949 4.392138 AGGCTTGCTAGAATCGTAACAAAC 59.608 41.667 0.00 0.00 0.00 2.93
2840 2950 4.391830 CAGGCTTGCTAGAATCGTAACAAA 59.608 41.667 0.00 0.00 0.00 2.83
2841 2951 3.932710 CAGGCTTGCTAGAATCGTAACAA 59.067 43.478 0.00 0.00 0.00 2.83
2842 2952 3.194755 TCAGGCTTGCTAGAATCGTAACA 59.805 43.478 0.00 0.00 0.00 2.41
2843 2953 3.552294 GTCAGGCTTGCTAGAATCGTAAC 59.448 47.826 0.00 0.00 0.00 2.50
2844 2954 3.194755 TGTCAGGCTTGCTAGAATCGTAA 59.805 43.478 0.00 0.00 0.00 3.18
2845 2955 2.758423 TGTCAGGCTTGCTAGAATCGTA 59.242 45.455 0.00 0.00 0.00 3.43
2846 2956 1.550524 TGTCAGGCTTGCTAGAATCGT 59.449 47.619 0.00 0.00 0.00 3.73
2847 2957 2.299993 TGTCAGGCTTGCTAGAATCG 57.700 50.000 0.00 0.00 0.00 3.34
2848 2958 3.314635 CCATTGTCAGGCTTGCTAGAATC 59.685 47.826 0.00 0.00 0.00 2.52
2849 2959 3.285484 CCATTGTCAGGCTTGCTAGAAT 58.715 45.455 0.00 0.00 0.00 2.40
2850 2960 2.715046 CCATTGTCAGGCTTGCTAGAA 58.285 47.619 0.00 0.00 0.00 2.10
2851 2961 2.408271 CCATTGTCAGGCTTGCTAGA 57.592 50.000 0.00 0.00 0.00 2.43
2860 2970 4.885907 AGATGAGTAATTGCCATTGTCAGG 59.114 41.667 0.00 0.00 0.00 3.86
2861 2971 7.558161 TTAGATGAGTAATTGCCATTGTCAG 57.442 36.000 0.00 0.00 0.00 3.51
2862 2972 7.067372 CCTTTAGATGAGTAATTGCCATTGTCA 59.933 37.037 0.00 0.00 0.00 3.58
2863 2973 7.283127 TCCTTTAGATGAGTAATTGCCATTGTC 59.717 37.037 0.00 0.00 0.00 3.18
2864 2974 7.118723 TCCTTTAGATGAGTAATTGCCATTGT 58.881 34.615 0.00 0.00 0.00 2.71
2865 2975 7.572523 TCCTTTAGATGAGTAATTGCCATTG 57.427 36.000 0.00 0.00 0.00 2.82
2876 2986 9.946754 AGGTACTCCAGCATCCTTTAGATGAGT 62.947 44.444 6.85 3.97 44.75 3.41
2877 2987 7.649554 AGGTACTCCAGCATCCTTTAGATGAG 61.650 46.154 6.85 0.00 44.75 2.90
2878 2988 5.874080 AGGTACTCCAGCATCCTTTAGATGA 60.874 44.000 6.85 0.00 44.75 2.92
2879 2989 4.346418 AGGTACTCCAGCATCCTTTAGATG 59.654 45.833 0.00 0.00 44.76 2.90
2880 2990 4.346418 CAGGTACTCCAGCATCCTTTAGAT 59.654 45.833 0.00 0.00 34.60 1.98
2881 2991 3.706594 CAGGTACTCCAGCATCCTTTAGA 59.293 47.826 0.00 0.00 34.60 2.10
2882 2992 3.452627 ACAGGTACTCCAGCATCCTTTAG 59.547 47.826 0.00 0.00 34.60 1.85
2883 2993 3.450904 ACAGGTACTCCAGCATCCTTTA 58.549 45.455 0.00 0.00 34.60 1.85
2884 2994 2.237392 GACAGGTACTCCAGCATCCTTT 59.763 50.000 0.00 0.00 34.60 3.11
2885 2995 1.834263 GACAGGTACTCCAGCATCCTT 59.166 52.381 0.00 0.00 34.60 3.36
2886 2996 1.007721 AGACAGGTACTCCAGCATCCT 59.992 52.381 0.00 0.00 34.60 3.24
2887 2997 1.410882 GAGACAGGTACTCCAGCATCC 59.589 57.143 0.00 0.00 34.60 3.51
2888 2998 2.880963 GAGACAGGTACTCCAGCATC 57.119 55.000 0.00 0.00 34.60 3.91
2895 3005 1.331399 GCCCCAGGAGACAGGTACTC 61.331 65.000 0.00 0.00 34.60 2.59
2896 3006 1.306226 GCCCCAGGAGACAGGTACT 60.306 63.158 0.00 0.00 43.88 2.73
2897 3007 0.032416 TAGCCCCAGGAGACAGGTAC 60.032 60.000 0.00 0.00 34.61 3.34
2898 3008 0.941963 ATAGCCCCAGGAGACAGGTA 59.058 55.000 0.00 0.00 34.61 3.08
2899 3009 0.941963 TATAGCCCCAGGAGACAGGT 59.058 55.000 0.00 0.00 34.61 4.00
2900 3010 1.905215 CATATAGCCCCAGGAGACAGG 59.095 57.143 0.00 0.00 36.60 4.00
2901 3011 1.277557 GCATATAGCCCCAGGAGACAG 59.722 57.143 0.00 0.00 37.23 3.51
2902 3012 1.352083 GCATATAGCCCCAGGAGACA 58.648 55.000 0.00 0.00 37.23 3.41
2903 3013 1.277557 CTGCATATAGCCCCAGGAGAC 59.722 57.143 0.00 0.00 44.83 3.36
2904 3014 1.649321 CTGCATATAGCCCCAGGAGA 58.351 55.000 0.00 0.00 44.83 3.71
2905 3015 0.035630 GCTGCATATAGCCCCAGGAG 60.036 60.000 0.00 0.00 44.83 3.69
2906 3016 2.069776 GCTGCATATAGCCCCAGGA 58.930 57.895 0.00 0.00 44.83 3.86
2907 3017 4.730487 GCTGCATATAGCCCCAGG 57.270 61.111 0.00 0.00 44.83 4.45
2913 3023 4.681421 TGCGAGGCTGCATATAGC 57.319 55.556 0.50 1.84 40.62 2.97
2921 3031 4.335647 AAGGGGTGTGCGAGGCTG 62.336 66.667 0.00 0.00 0.00 4.85
2922 3032 4.335647 CAAGGGGTGTGCGAGGCT 62.336 66.667 0.00 0.00 0.00 4.58
2924 3034 3.925630 ATGCAAGGGGTGTGCGAGG 62.926 63.158 0.00 0.00 45.27 4.63
2925 3035 1.973281 AATGCAAGGGGTGTGCGAG 60.973 57.895 0.00 0.00 45.27 5.03
2926 3036 2.115052 AATGCAAGGGGTGTGCGA 59.885 55.556 0.00 0.00 45.27 5.10
2927 3037 2.259204 CAATGCAAGGGGTGTGCG 59.741 61.111 0.00 0.00 45.27 5.34
2928 3038 1.290009 GACAATGCAAGGGGTGTGC 59.710 57.895 0.00 0.00 42.55 4.57
2929 3039 1.865788 CGGACAATGCAAGGGGTGTG 61.866 60.000 0.00 0.00 0.00 3.82
2930 3040 1.603455 CGGACAATGCAAGGGGTGT 60.603 57.895 0.00 0.00 0.00 4.16
2931 3041 0.680921 ATCGGACAATGCAAGGGGTG 60.681 55.000 0.00 0.00 0.00 4.61
2932 3042 0.394352 GATCGGACAATGCAAGGGGT 60.394 55.000 0.00 0.00 0.00 4.95
2933 3043 1.439353 CGATCGGACAATGCAAGGGG 61.439 60.000 7.38 0.00 0.00 4.79
2934 3044 0.461870 TCGATCGGACAATGCAAGGG 60.462 55.000 16.41 0.00 0.00 3.95
2935 3045 0.933097 CTCGATCGGACAATGCAAGG 59.067 55.000 16.41 0.00 0.00 3.61
2936 3046 1.590238 GACTCGATCGGACAATGCAAG 59.410 52.381 16.41 4.16 0.00 4.01
2937 3047 1.640428 GACTCGATCGGACAATGCAA 58.360 50.000 16.41 0.00 0.00 4.08
2938 3048 3.345737 GACTCGATCGGACAATGCA 57.654 52.632 16.41 0.00 0.00 3.96
2948 3058 2.224885 GGAGCGCAACGACTCGATC 61.225 63.158 11.47 0.00 39.99 3.69
2949 3059 2.202623 GGAGCGCAACGACTCGAT 60.203 61.111 11.47 0.00 33.41 3.59
2950 3060 4.415332 GGGAGCGCAACGACTCGA 62.415 66.667 11.47 0.00 33.41 4.04
2951 3061 3.916392 AAGGGAGCGCAACGACTCG 62.916 63.158 11.47 0.00 33.41 4.18
2952 3062 2.048127 AAGGGAGCGCAACGACTC 60.048 61.111 11.47 0.00 32.46 3.36
2953 3063 2.048127 GAAGGGAGCGCAACGACT 60.048 61.111 11.47 2.45 0.00 4.18
2954 3064 2.048127 AGAAGGGAGCGCAACGAC 60.048 61.111 11.47 0.00 0.00 4.34
2955 3065 2.261671 GAGAAGGGAGCGCAACGA 59.738 61.111 11.47 0.00 0.00 3.85
2956 3066 2.788191 AAGGAGAAGGGAGCGCAACG 62.788 60.000 11.47 0.00 0.00 4.10
2957 3067 1.003233 AAGGAGAAGGGAGCGCAAC 60.003 57.895 11.47 2.54 0.00 4.17
2958 3068 1.003355 CAAGGAGAAGGGAGCGCAA 60.003 57.895 11.47 0.00 0.00 4.85
2959 3069 0.902984 TACAAGGAGAAGGGAGCGCA 60.903 55.000 11.47 0.00 0.00 6.09
2960 3070 0.466124 ATACAAGGAGAAGGGAGCGC 59.534 55.000 0.00 0.00 0.00 5.92
2961 3071 1.069358 GGATACAAGGAGAAGGGAGCG 59.931 57.143 0.00 0.00 0.00 5.03
2962 3072 1.069358 CGGATACAAGGAGAAGGGAGC 59.931 57.143 0.00 0.00 0.00 4.70
2963 3073 1.069358 GCGGATACAAGGAGAAGGGAG 59.931 57.143 0.00 0.00 0.00 4.30
2964 3074 1.120530 GCGGATACAAGGAGAAGGGA 58.879 55.000 0.00 0.00 0.00 4.20
2965 3075 1.123928 AGCGGATACAAGGAGAAGGG 58.876 55.000 0.00 0.00 0.00 3.95
2966 3076 2.168521 TGAAGCGGATACAAGGAGAAGG 59.831 50.000 0.00 0.00 0.00 3.46
2967 3077 3.131223 TCTGAAGCGGATACAAGGAGAAG 59.869 47.826 0.00 0.00 0.00 2.85
2968 3078 3.096852 TCTGAAGCGGATACAAGGAGAA 58.903 45.455 0.00 0.00 0.00 2.87
2969 3079 2.690497 CTCTGAAGCGGATACAAGGAGA 59.310 50.000 0.00 0.00 0.00 3.71
2970 3080 2.223923 CCTCTGAAGCGGATACAAGGAG 60.224 54.545 0.00 0.00 0.00 3.69
2971 3081 1.757118 CCTCTGAAGCGGATACAAGGA 59.243 52.381 0.00 0.00 0.00 3.36
2972 3082 1.482593 ACCTCTGAAGCGGATACAAGG 59.517 52.381 0.00 0.00 0.00 3.61
2973 3083 2.969628 ACCTCTGAAGCGGATACAAG 57.030 50.000 0.00 0.00 0.00 3.16
2974 3084 2.565391 TGAACCTCTGAAGCGGATACAA 59.435 45.455 0.00 0.00 0.00 2.41
2975 3085 2.176045 TGAACCTCTGAAGCGGATACA 58.824 47.619 0.00 0.00 0.00 2.29
2976 3086 2.961526 TGAACCTCTGAAGCGGATAC 57.038 50.000 0.00 0.00 0.00 2.24
2977 3087 3.031013 TCATGAACCTCTGAAGCGGATA 58.969 45.455 0.00 0.00 0.00 2.59
2978 3088 1.833630 TCATGAACCTCTGAAGCGGAT 59.166 47.619 0.00 0.00 0.00 4.18
2979 3089 1.066858 GTCATGAACCTCTGAAGCGGA 60.067 52.381 0.00 0.00 0.00 5.54
2980 3090 1.066573 AGTCATGAACCTCTGAAGCGG 60.067 52.381 0.00 0.00 0.00 5.52
2981 3091 2.376808 AGTCATGAACCTCTGAAGCG 57.623 50.000 0.00 0.00 0.00 4.68
2982 3092 3.188048 CACAAGTCATGAACCTCTGAAGC 59.812 47.826 0.00 0.00 0.00 3.86
2983 3093 3.750130 CCACAAGTCATGAACCTCTGAAG 59.250 47.826 0.00 0.00 0.00 3.02
2984 3094 3.496692 CCCACAAGTCATGAACCTCTGAA 60.497 47.826 0.00 0.00 0.00 3.02
2985 3095 2.038952 CCCACAAGTCATGAACCTCTGA 59.961 50.000 0.00 0.00 0.00 3.27
2986 3096 2.038952 TCCCACAAGTCATGAACCTCTG 59.961 50.000 0.00 0.00 0.00 3.35
2987 3097 2.039084 GTCCCACAAGTCATGAACCTCT 59.961 50.000 0.00 0.00 0.00 3.69
2988 3098 2.427506 GTCCCACAAGTCATGAACCTC 58.572 52.381 0.00 0.00 0.00 3.85
2989 3099 1.270839 CGTCCCACAAGTCATGAACCT 60.271 52.381 0.00 0.00 0.00 3.50
2990 3100 1.156736 CGTCCCACAAGTCATGAACC 58.843 55.000 0.00 0.00 0.00 3.62
2991 3101 1.531149 CACGTCCCACAAGTCATGAAC 59.469 52.381 0.00 0.00 0.00 3.18
2992 3102 1.542328 CCACGTCCCACAAGTCATGAA 60.542 52.381 0.00 0.00 0.00 2.57
2993 3103 0.034756 CCACGTCCCACAAGTCATGA 59.965 55.000 0.00 0.00 0.00 3.07
2994 3104 1.577328 GCCACGTCCCACAAGTCATG 61.577 60.000 0.00 0.00 0.00 3.07
2995 3105 1.302511 GCCACGTCCCACAAGTCAT 60.303 57.895 0.00 0.00 0.00 3.06
2996 3106 2.110213 GCCACGTCCCACAAGTCA 59.890 61.111 0.00 0.00 0.00 3.41
2997 3107 2.668550 GGCCACGTCCCACAAGTC 60.669 66.667 0.00 0.00 0.00 3.01
2998 3108 4.619227 CGGCCACGTCCCACAAGT 62.619 66.667 2.24 0.00 34.81 3.16
3025 3135 1.717429 CGTAAAAGACGTTGCACGAGC 60.717 52.381 14.18 0.00 46.05 5.03
3026 3136 2.192463 CGTAAAAGACGTTGCACGAG 57.808 50.000 14.18 0.00 46.05 4.18
3044 3154 4.514569 GCATACGCAACGGCCACG 62.515 66.667 2.24 2.83 41.75 4.94
3045 3155 4.514569 CGCATACGCAACGGCCAC 62.515 66.667 2.24 0.00 38.40 5.01
3062 3172 1.187567 ACCCCACCAATGCAGAAAGC 61.188 55.000 0.00 0.00 45.96 3.51
3063 3173 0.604578 CACCCCACCAATGCAGAAAG 59.395 55.000 0.00 0.00 0.00 2.62
3064 3174 0.831288 CCACCCCACCAATGCAGAAA 60.831 55.000 0.00 0.00 0.00 2.52
3065 3175 1.228831 CCACCCCACCAATGCAGAA 60.229 57.895 0.00 0.00 0.00 3.02
3066 3176 2.440147 CCACCCCACCAATGCAGA 59.560 61.111 0.00 0.00 0.00 4.26
3067 3177 3.384532 GCCACCCCACCAATGCAG 61.385 66.667 0.00 0.00 0.00 4.41
3070 3180 2.600173 AACGCCACCCCACCAATG 60.600 61.111 0.00 0.00 0.00 2.82
3071 3181 2.600173 CAACGCCACCCCACCAAT 60.600 61.111 0.00 0.00 0.00 3.16
3072 3182 4.904590 CCAACGCCACCCCACCAA 62.905 66.667 0.00 0.00 0.00 3.67
3078 3188 2.779951 GAAAATGCCCAACGCCACCC 62.780 60.000 0.00 0.00 36.24 4.61
3079 3189 1.374125 GAAAATGCCCAACGCCACC 60.374 57.895 0.00 0.00 36.24 4.61
3080 3190 0.943835 GTGAAAATGCCCAACGCCAC 60.944 55.000 0.00 0.00 36.24 5.01
3081 3191 1.112315 AGTGAAAATGCCCAACGCCA 61.112 50.000 0.00 0.00 36.24 5.69
3082 3192 0.033366 AAGTGAAAATGCCCAACGCC 59.967 50.000 0.00 0.00 36.24 5.68
3083 3193 1.139163 CAAGTGAAAATGCCCAACGC 58.861 50.000 0.00 0.00 38.31 4.84
3084 3194 2.507339 ACAAGTGAAAATGCCCAACG 57.493 45.000 0.00 0.00 0.00 4.10
3085 3195 3.791245 TCAACAAGTGAAAATGCCCAAC 58.209 40.909 0.00 0.00 31.51 3.77
3086 3196 4.478206 TTCAACAAGTGAAAATGCCCAA 57.522 36.364 0.00 0.00 43.43 4.12
3095 3205 1.353804 GCGGCGTTCAACAAGTGAA 59.646 52.632 9.37 0.00 44.20 3.18
3096 3206 1.163420 ATGCGGCGTTCAACAAGTGA 61.163 50.000 9.37 0.00 0.00 3.41
3097 3207 0.998226 CATGCGGCGTTCAACAAGTG 60.998 55.000 9.37 0.00 0.00 3.16
3098 3208 1.163420 TCATGCGGCGTTCAACAAGT 61.163 50.000 9.37 0.00 0.00 3.16
3099 3209 0.168788 ATCATGCGGCGTTCAACAAG 59.831 50.000 9.37 0.00 0.00 3.16
3100 3210 0.167908 GATCATGCGGCGTTCAACAA 59.832 50.000 9.37 0.00 0.00 2.83
3101 3211 0.952984 TGATCATGCGGCGTTCAACA 60.953 50.000 9.37 0.00 0.00 3.33
3102 3212 0.521242 GTGATCATGCGGCGTTCAAC 60.521 55.000 9.37 0.00 0.00 3.18
3103 3213 1.643868 GGTGATCATGCGGCGTTCAA 61.644 55.000 9.37 0.00 0.00 2.69
3104 3214 2.106074 GGTGATCATGCGGCGTTCA 61.106 57.895 9.37 0.00 0.00 3.18
3105 3215 2.709475 GGTGATCATGCGGCGTTC 59.291 61.111 9.37 0.00 0.00 3.95
3106 3216 2.824041 GGGTGATCATGCGGCGTT 60.824 61.111 9.37 0.00 0.00 4.84
3107 3217 3.740128 GAGGGTGATCATGCGGCGT 62.740 63.158 9.37 0.00 0.00 5.68
3108 3218 2.969238 GAGGGTGATCATGCGGCG 60.969 66.667 0.51 0.51 0.00 6.46
3109 3219 2.592861 GGAGGGTGATCATGCGGC 60.593 66.667 0.00 0.00 0.00 6.53
3110 3220 0.107017 AAAGGAGGGTGATCATGCGG 60.107 55.000 0.00 0.00 0.00 5.69
3111 3221 1.755179 AAAAGGAGGGTGATCATGCG 58.245 50.000 0.00 0.00 0.00 4.73
3112 3222 2.827921 ACAAAAAGGAGGGTGATCATGC 59.172 45.455 0.00 0.00 0.00 4.06
3113 3223 4.338879 AGACAAAAAGGAGGGTGATCATG 58.661 43.478 0.00 0.00 0.00 3.07
3114 3224 4.664688 AGACAAAAAGGAGGGTGATCAT 57.335 40.909 0.00 0.00 0.00 2.45
3115 3225 4.597507 AGTAGACAAAAAGGAGGGTGATCA 59.402 41.667 0.00 0.00 0.00 2.92
3116 3226 5.167303 AGTAGACAAAAAGGAGGGTGATC 57.833 43.478 0.00 0.00 0.00 2.92
3117 3227 5.310857 AGAAGTAGACAAAAAGGAGGGTGAT 59.689 40.000 0.00 0.00 0.00 3.06
3118 3228 4.658901 AGAAGTAGACAAAAAGGAGGGTGA 59.341 41.667 0.00 0.00 0.00 4.02
3119 3229 4.974399 AGAAGTAGACAAAAAGGAGGGTG 58.026 43.478 0.00 0.00 0.00 4.61
3120 3230 4.908481 AGAGAAGTAGACAAAAAGGAGGGT 59.092 41.667 0.00 0.00 0.00 4.34
3121 3231 5.221742 ACAGAGAAGTAGACAAAAAGGAGGG 60.222 44.000 0.00 0.00 0.00 4.30
3122 3232 5.859495 ACAGAGAAGTAGACAAAAAGGAGG 58.141 41.667 0.00 0.00 0.00 4.30
3123 3233 6.203723 CCAACAGAGAAGTAGACAAAAAGGAG 59.796 42.308 0.00 0.00 0.00 3.69
3124 3234 6.055588 CCAACAGAGAAGTAGACAAAAAGGA 58.944 40.000 0.00 0.00 0.00 3.36
3125 3235 5.239525 CCCAACAGAGAAGTAGACAAAAAGG 59.760 44.000 0.00 0.00 0.00 3.11
3126 3236 5.823045 ACCCAACAGAGAAGTAGACAAAAAG 59.177 40.000 0.00 0.00 0.00 2.27
3127 3237 5.751586 ACCCAACAGAGAAGTAGACAAAAA 58.248 37.500 0.00 0.00 0.00 1.94
3128 3238 5.365619 GACCCAACAGAGAAGTAGACAAAA 58.634 41.667 0.00 0.00 0.00 2.44
3129 3239 4.202326 GGACCCAACAGAGAAGTAGACAAA 60.202 45.833 0.00 0.00 0.00 2.83
3130 3240 3.323979 GGACCCAACAGAGAAGTAGACAA 59.676 47.826 0.00 0.00 0.00 3.18
3131 3241 2.897969 GGACCCAACAGAGAAGTAGACA 59.102 50.000 0.00 0.00 0.00 3.41
3132 3242 2.234168 GGGACCCAACAGAGAAGTAGAC 59.766 54.545 5.33 0.00 0.00 2.59
3133 3243 2.537143 GGGACCCAACAGAGAAGTAGA 58.463 52.381 5.33 0.00 0.00 2.59
3134 3244 1.204941 CGGGACCCAACAGAGAAGTAG 59.795 57.143 12.15 0.00 0.00 2.57
3135 3245 1.203087 TCGGGACCCAACAGAGAAGTA 60.203 52.381 12.15 0.00 0.00 2.24
3136 3246 0.471211 TCGGGACCCAACAGAGAAGT 60.471 55.000 12.15 0.00 0.00 3.01
3137 3247 0.037232 GTCGGGACCCAACAGAGAAG 60.037 60.000 12.15 0.00 0.00 2.85
3138 3248 0.471211 AGTCGGGACCCAACAGAGAA 60.471 55.000 12.15 0.00 0.00 2.87
3139 3249 1.155390 AGTCGGGACCCAACAGAGA 59.845 57.895 12.15 0.00 0.00 3.10
3140 3250 1.293498 CAGTCGGGACCCAACAGAG 59.707 63.158 12.15 0.00 0.00 3.35
3141 3251 2.214216 CCAGTCGGGACCCAACAGA 61.214 63.158 12.15 0.00 40.01 3.41
3142 3252 2.347490 CCAGTCGGGACCCAACAG 59.653 66.667 12.15 0.00 40.01 3.16
3143 3253 2.446994 ACCAGTCGGGACCCAACA 60.447 61.111 12.15 0.00 41.15 3.33
3144 3254 0.901580 TAGACCAGTCGGGACCCAAC 60.902 60.000 12.15 1.19 41.15 3.77
3145 3255 0.901580 GTAGACCAGTCGGGACCCAA 60.902 60.000 12.15 0.00 41.15 4.12
3146 3256 1.304713 GTAGACCAGTCGGGACCCA 60.305 63.158 12.15 0.00 41.15 4.51
3147 3257 1.000107 AGTAGACCAGTCGGGACCC 60.000 63.158 0.00 0.00 41.15 4.46
3148 3258 1.375098 CGAGTAGACCAGTCGGGACC 61.375 65.000 0.00 0.00 44.77 4.46
3149 3259 2.096596 CGAGTAGACCAGTCGGGAC 58.903 63.158 0.00 0.00 44.77 4.46
3150 3260 4.631773 CGAGTAGACCAGTCGGGA 57.368 61.111 0.00 0.00 44.77 5.14
3154 3264 0.889306 AACTGCCGAGTAGACCAGTC 59.111 55.000 0.00 0.00 37.55 3.51
3155 3265 0.889306 GAACTGCCGAGTAGACCAGT 59.111 55.000 0.00 0.00 40.02 4.00
3156 3266 0.179161 CGAACTGCCGAGTAGACCAG 60.179 60.000 0.00 0.00 0.00 4.00
3157 3267 1.592400 CCGAACTGCCGAGTAGACCA 61.592 60.000 0.00 0.00 0.00 4.02
3158 3268 1.139095 CCGAACTGCCGAGTAGACC 59.861 63.158 0.00 0.00 0.00 3.85
3159 3269 0.179169 GACCGAACTGCCGAGTAGAC 60.179 60.000 0.00 0.00 0.00 2.59
3160 3270 0.322277 AGACCGAACTGCCGAGTAGA 60.322 55.000 0.00 0.00 0.00 2.59
3161 3271 0.099082 GAGACCGAACTGCCGAGTAG 59.901 60.000 0.00 0.00 0.00 2.57
3162 3272 1.642037 CGAGACCGAACTGCCGAGTA 61.642 60.000 0.00 0.00 38.22 2.59
3163 3273 2.963371 GAGACCGAACTGCCGAGT 59.037 61.111 0.00 0.00 0.00 4.18
3164 3274 2.202492 CGAGACCGAACTGCCGAG 60.202 66.667 0.00 0.00 38.22 4.63
3165 3275 2.974489 GACGAGACCGAACTGCCGA 61.974 63.158 0.00 0.00 39.50 5.54
3166 3276 2.504244 GACGAGACCGAACTGCCG 60.504 66.667 0.00 0.00 39.50 5.69
3167 3277 2.504244 CGACGAGACCGAACTGCC 60.504 66.667 0.00 0.00 39.50 4.85
3168 3278 3.173240 GCGACGAGACCGAACTGC 61.173 66.667 0.00 0.00 39.50 4.40
3169 3279 2.870161 CGCGACGAGACCGAACTG 60.870 66.667 0.00 0.00 39.50 3.16
3170 3280 3.046087 TCGCGACGAGACCGAACT 61.046 61.111 3.71 0.00 39.50 3.01
3171 3281 2.868787 GTCGCGACGAGACCGAAC 60.869 66.667 25.19 0.00 36.23 3.95
3172 3282 3.304764 CTGTCGCGACGAGACCGAA 62.305 63.158 31.88 12.73 36.23 4.30
3173 3283 3.785499 CTGTCGCGACGAGACCGA 61.785 66.667 31.88 13.47 36.23 4.69
3185 3295 2.087462 TATCAGGGGATGCGCTGTCG 62.087 60.000 26.59 6.03 34.89 4.35
3186 3296 0.320247 CTATCAGGGGATGCGCTGTC 60.320 60.000 26.59 6.91 34.89 3.51
3187 3297 1.750930 CTATCAGGGGATGCGCTGT 59.249 57.895 26.59 17.68 34.89 4.40
3188 3298 1.004080 CCTATCAGGGGATGCGCTG 60.004 63.158 23.00 23.00 34.89 5.18
3189 3299 2.888447 GCCTATCAGGGGATGCGCT 61.888 63.158 9.73 0.00 35.37 5.92
3190 3300 2.359230 GCCTATCAGGGGATGCGC 60.359 66.667 0.00 0.00 35.37 6.09
3197 3307 1.656652 CTGAAACACGCCTATCAGGG 58.343 55.000 0.00 0.00 36.50 4.45
3199 3309 1.066143 ACCCTGAAACACGCCTATCAG 60.066 52.381 0.00 0.00 39.16 2.90
3200 3310 0.981183 ACCCTGAAACACGCCTATCA 59.019 50.000 0.00 0.00 0.00 2.15
3201 3311 1.338769 ACACCCTGAAACACGCCTATC 60.339 52.381 0.00 0.00 0.00 2.08
3202 3312 0.690762 ACACCCTGAAACACGCCTAT 59.309 50.000 0.00 0.00 0.00 2.57
3203 3313 0.250124 CACACCCTGAAACACGCCTA 60.250 55.000 0.00 0.00 0.00 3.93
3204 3314 1.525995 CACACCCTGAAACACGCCT 60.526 57.895 0.00 0.00 0.00 5.52
3205 3315 3.030652 CACACCCTGAAACACGCC 58.969 61.111 0.00 0.00 0.00 5.68
3206 3316 2.331451 GCACACCCTGAAACACGC 59.669 61.111 0.00 0.00 0.00 5.34
3207 3317 2.177580 ACGCACACCCTGAAACACG 61.178 57.895 0.00 0.00 0.00 4.49
3208 3318 1.355210 CACGCACACCCTGAAACAC 59.645 57.895 0.00 0.00 0.00 3.32
3209 3319 1.078072 ACACGCACACCCTGAAACA 60.078 52.632 0.00 0.00 0.00 2.83
3210 3320 0.814010 AGACACGCACACCCTGAAAC 60.814 55.000 0.00 0.00 0.00 2.78
3211 3321 0.753867 TAGACACGCACACCCTGAAA 59.246 50.000 0.00 0.00 0.00 2.69
3212 3322 0.032952 GTAGACACGCACACCCTGAA 59.967 55.000 0.00 0.00 0.00 3.02
3213 3323 1.663739 GTAGACACGCACACCCTGA 59.336 57.895 0.00 0.00 0.00 3.86
3214 3324 1.374252 GGTAGACACGCACACCCTG 60.374 63.158 0.00 0.00 0.00 4.45
3215 3325 2.580601 GGGTAGACACGCACACCCT 61.581 63.158 1.29 0.00 46.08 4.34
3216 3326 2.047560 GGGTAGACACGCACACCC 60.048 66.667 0.00 0.00 43.72 4.61
3217 3327 2.431942 CGGGTAGACACGCACACC 60.432 66.667 0.00 0.00 35.32 4.16
3218 3328 2.431942 CCGGGTAGACACGCACAC 60.432 66.667 0.00 0.00 42.34 3.82
3219 3329 4.367023 GCCGGGTAGACACGCACA 62.367 66.667 2.18 0.00 42.34 4.57
3220 3330 2.703798 TAGCCGGGTAGACACGCAC 61.704 63.158 9.87 0.00 42.34 5.34
3221 3331 2.361483 TAGCCGGGTAGACACGCA 60.361 61.111 9.87 0.00 42.34 5.24
3222 3332 2.103736 GTAGCCGGGTAGACACGC 59.896 66.667 15.00 0.00 42.34 5.34
3223 3333 1.028330 TCAGTAGCCGGGTAGACACG 61.028 60.000 15.00 0.00 43.52 4.49
3224 3334 1.135170 GTTCAGTAGCCGGGTAGACAC 60.135 57.143 15.00 4.68 0.00 3.67
3225 3335 1.180029 GTTCAGTAGCCGGGTAGACA 58.820 55.000 15.00 0.00 0.00 3.41
3226 3336 0.459078 GGTTCAGTAGCCGGGTAGAC 59.541 60.000 15.00 5.96 0.00 2.59
3227 3337 0.685458 GGGTTCAGTAGCCGGGTAGA 60.685 60.000 15.00 6.03 34.09 2.59
3228 3338 1.683418 GGGGTTCAGTAGCCGGGTAG 61.683 65.000 15.00 3.32 45.75 3.18
3229 3339 1.686800 GGGGTTCAGTAGCCGGGTA 60.687 63.158 9.87 9.87 45.75 3.69
3230 3340 3.007323 GGGGTTCAGTAGCCGGGT 61.007 66.667 12.58 12.58 45.75 5.28
3231 3341 4.157120 CGGGGTTCAGTAGCCGGG 62.157 72.222 2.18 0.00 45.75 5.73
3232 3342 4.832608 GCGGGGTTCAGTAGCCGG 62.833 72.222 0.00 0.00 45.75 6.13
3233 3343 4.832608 GGCGGGGTTCAGTAGCCG 62.833 72.222 0.00 0.00 45.75 5.52
3235 3345 0.468648 AATAGGCGGGGTTCAGTAGC 59.531 55.000 0.00 0.00 0.00 3.58
3236 3346 2.169769 TCAAATAGGCGGGGTTCAGTAG 59.830 50.000 0.00 0.00 0.00 2.57
3237 3347 2.189676 TCAAATAGGCGGGGTTCAGTA 58.810 47.619 0.00 0.00 0.00 2.74
3238 3348 0.988832 TCAAATAGGCGGGGTTCAGT 59.011 50.000 0.00 0.00 0.00 3.41
3239 3349 2.348411 ATCAAATAGGCGGGGTTCAG 57.652 50.000 0.00 0.00 0.00 3.02
3240 3350 2.105821 CCTATCAAATAGGCGGGGTTCA 59.894 50.000 0.22 0.00 45.36 3.18
3241 3351 2.779506 CCTATCAAATAGGCGGGGTTC 58.220 52.381 0.22 0.00 45.36 3.62
3242 3352 2.951229 CCTATCAAATAGGCGGGGTT 57.049 50.000 0.22 0.00 45.36 4.11
3250 3360 7.041984 GGCTCTAAACGTTTCCCTATCAAATAG 60.042 40.741 18.42 4.78 0.00 1.73
3251 3361 6.764560 GGCTCTAAACGTTTCCCTATCAAATA 59.235 38.462 18.42 0.00 0.00 1.40
3252 3362 5.589050 GGCTCTAAACGTTTCCCTATCAAAT 59.411 40.000 18.42 0.00 0.00 2.32
3253 3363 4.939439 GGCTCTAAACGTTTCCCTATCAAA 59.061 41.667 18.42 0.00 0.00 2.69
3254 3364 4.510571 GGCTCTAAACGTTTCCCTATCAA 58.489 43.478 18.42 0.00 0.00 2.57
3255 3365 3.429822 CGGCTCTAAACGTTTCCCTATCA 60.430 47.826 18.42 0.00 0.00 2.15
3256 3366 3.121544 CGGCTCTAAACGTTTCCCTATC 58.878 50.000 18.42 3.35 0.00 2.08
3257 3367 2.159000 CCGGCTCTAAACGTTTCCCTAT 60.159 50.000 18.42 0.00 0.00 2.57
3258 3368 1.205417 CCGGCTCTAAACGTTTCCCTA 59.795 52.381 18.42 0.00 0.00 3.53
3259 3369 0.036671 CCGGCTCTAAACGTTTCCCT 60.037 55.000 18.42 0.00 0.00 4.20
3260 3370 0.321034 ACCGGCTCTAAACGTTTCCC 60.321 55.000 18.42 12.46 0.00 3.97
3261 3371 1.073964 GACCGGCTCTAAACGTTTCC 58.926 55.000 18.42 11.49 0.00 3.13
3262 3372 1.787012 TGACCGGCTCTAAACGTTTC 58.213 50.000 18.42 2.59 0.00 2.78
3263 3373 1.869132 GTTGACCGGCTCTAAACGTTT 59.131 47.619 18.90 18.90 0.00 3.60
3264 3374 1.505425 GTTGACCGGCTCTAAACGTT 58.495 50.000 0.00 0.00 0.00 3.99
3265 3375 0.320160 GGTTGACCGGCTCTAAACGT 60.320 55.000 0.00 0.00 0.00 3.99
3266 3376 2.452767 GGTTGACCGGCTCTAAACG 58.547 57.895 0.00 0.00 0.00 3.60
3278 3388 3.249973 GAACGCTTGGCCGGTTGAC 62.250 63.158 1.90 0.00 0.00 3.18
3279 3389 2.975799 GAACGCTTGGCCGGTTGA 60.976 61.111 1.90 0.00 0.00 3.18
3280 3390 4.383602 CGAACGCTTGGCCGGTTG 62.384 66.667 1.90 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.