Multiple sequence alignment - TraesCS3D01G369800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G369800 chr3D 100.000 2535 0 0 1 2535 482594965 482597499 0.000000e+00 4682.0
1 TraesCS3D01G369800 chr3D 97.959 49 1 0 2447 2495 6754849 6754801 4.490000e-13 86.1
2 TraesCS3D01G369800 chr3D 97.959 49 1 0 2447 2495 213395618 213395570 4.490000e-13 86.1
3 TraesCS3D01G369800 chr3B 86.900 1832 137 58 684 2448 644910055 644911850 0.000000e+00 1958.0
4 TraesCS3D01G369800 chr3B 92.692 260 18 1 1 259 644909661 644909920 8.560000e-100 374.0
5 TraesCS3D01G369800 chr3B 94.915 118 5 1 488 604 644909911 644910028 1.550000e-42 183.0
6 TraesCS3D01G369800 chr3B 100.000 49 0 0 2447 2495 483386190 483386142 9.660000e-15 91.6
7 TraesCS3D01G369800 chr3A 88.412 1096 71 32 767 1824 625532855 625533932 0.000000e+00 1269.0
8 TraesCS3D01G369800 chr3A 82.117 548 55 25 1910 2445 625534004 625534520 1.800000e-116 429.0
9 TraesCS3D01G369800 chr2A 94.262 244 12 2 252 493 362446138 362445895 3.080000e-99 372.0
10 TraesCS3D01G369800 chr2A 82.231 242 42 1 15 255 326826572 326826331 9.190000e-50 207.0
11 TraesCS3D01G369800 chr7A 93.878 245 14 1 254 497 631367419 631367663 3.980000e-98 368.0
12 TraesCS3D01G369800 chr7A 82.845 239 40 1 15 252 349056025 349056263 1.980000e-51 213.0
13 TraesCS3D01G369800 chr1B 93.827 243 14 1 254 495 520524972 520524730 5.150000e-97 364.0
14 TraesCS3D01G369800 chr7D 93.776 241 14 1 254 493 31062082 31061842 6.670000e-96 361.0
15 TraesCS3D01G369800 chr7D 90.299 268 19 6 254 519 34602919 34602657 6.710000e-91 344.0
16 TraesCS3D01G369800 chr6B 93.776 241 14 1 254 493 523343637 523343877 6.670000e-96 361.0
17 TraesCS3D01G369800 chr2B 93.061 245 15 2 254 497 101976714 101976957 8.620000e-95 357.0
18 TraesCS3D01G369800 chr2B 82.427 239 41 1 15 252 326407909 326408147 9.190000e-50 207.0
19 TraesCS3D01G369800 chr1D 93.061 245 15 2 254 497 27881649 27881892 8.620000e-95 357.0
20 TraesCS3D01G369800 chr2D 93.004 243 16 1 252 493 295166645 295166403 1.120000e-93 353.0
21 TraesCS3D01G369800 chr6A 83.058 242 40 1 15 255 282070714 282070473 4.250000e-53 219.0
22 TraesCS3D01G369800 chr6A 84.516 155 21 2 1371 1522 16984423 16984269 1.570000e-32 150.0
23 TraesCS3D01G369800 chrUn 82.231 242 42 1 15 255 116277285 116277044 9.190000e-50 207.0
24 TraesCS3D01G369800 chrUn 82.008 239 42 1 15 252 140475010 140475248 4.280000e-48 202.0
25 TraesCS3D01G369800 chrUn 81.405 242 44 1 15 255 132985021 132984780 1.990000e-46 196.0
26 TraesCS3D01G369800 chrUn 97.959 49 1 0 2447 2495 86516614 86516566 4.490000e-13 86.1
27 TraesCS3D01G369800 chrUn 97.959 49 1 0 2447 2495 206784132 206784084 4.490000e-13 86.1
28 TraesCS3D01G369800 chrUn 97.959 49 1 0 2447 2495 345389166 345389214 4.490000e-13 86.1
29 TraesCS3D01G369800 chr4A 82.819 227 38 1 30 255 306358606 306358380 4.280000e-48 202.0
30 TraesCS3D01G369800 chr6D 97.959 49 1 0 2447 2495 124503010 124502962 4.490000e-13 86.1
31 TraesCS3D01G369800 chr4D 97.959 49 1 0 2447 2495 123289189 123289141 4.490000e-13 86.1
32 TraesCS3D01G369800 chr4D 97.959 49 1 0 2447 2495 362115931 362115979 4.490000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G369800 chr3D 482594965 482597499 2534 False 4682.000000 4682 100.000000 1 2535 1 chr3D.!!$F1 2534
1 TraesCS3D01G369800 chr3B 644909661 644911850 2189 False 838.333333 1958 91.502333 1 2448 3 chr3B.!!$F1 2447
2 TraesCS3D01G369800 chr3A 625532855 625534520 1665 False 849.000000 1269 85.264500 767 2445 2 chr3A.!!$F1 1678

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
429 431 0.031585 CAGTCGGTCTCGTTGGTCAA 59.968 55.0 0.0 0.0 37.69 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1793 1847 0.031449 ACCGGAAAACCATTTGCACG 59.969 50.0 9.46 0.0 36.74 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 99 4.937015 GTGCATTGGTTAATGAAAAGGCAT 59.063 37.500 4.33 0.00 45.21 4.40
100 102 6.593382 TGCATTGGTTAATGAAAAGGCATAAC 59.407 34.615 4.33 0.00 45.21 1.89
139 141 6.748132 ACCTGAATTCAATTTTCGATGTTGT 58.252 32.000 9.88 0.00 0.00 3.32
148 150 8.964420 TCAATTTTCGATGTTGTTTTCTATCC 57.036 30.769 0.00 0.00 0.00 2.59
149 151 8.572185 TCAATTTTCGATGTTGTTTTCTATCCA 58.428 29.630 0.00 0.00 0.00 3.41
152 154 7.921786 TTTCGATGTTGTTTTCTATCCATCT 57.078 32.000 0.00 0.00 0.00 2.90
169 171 9.750783 CTATCCATCTCCCAATTTCATAAGAAT 57.249 33.333 0.00 0.00 32.89 2.40
200 202 9.562408 TGGTATTCACTACACAAATCAACTTTA 57.438 29.630 0.00 0.00 31.44 1.85
228 230 7.602517 AATATGATAGAGCCGCTTAATTCAC 57.397 36.000 0.00 0.00 0.00 3.18
233 235 2.162408 AGAGCCGCTTAATTCACAAAGC 59.838 45.455 0.00 1.28 43.71 3.51
255 257 8.411991 AAGCATATTCTCTAACCTAGGAGTAC 57.588 38.462 17.98 0.00 0.00 2.73
276 278 9.495572 GAGTACTCCCTCCATTTCAAAATATAG 57.504 37.037 12.13 0.00 0.00 1.31
277 279 9.004231 AGTACTCCCTCCATTTCAAAATATAGT 57.996 33.333 0.00 0.00 0.00 2.12
278 280 9.057089 GTACTCCCTCCATTTCAAAATATAGTG 57.943 37.037 0.00 0.00 0.00 2.74
279 281 6.547510 ACTCCCTCCATTTCAAAATATAGTGC 59.452 38.462 0.00 0.00 0.00 4.40
280 282 5.530915 TCCCTCCATTTCAAAATATAGTGCG 59.469 40.000 0.00 0.00 0.00 5.34
281 283 5.215160 CCTCCATTTCAAAATATAGTGCGC 58.785 41.667 0.00 0.00 0.00 6.09
282 284 5.181690 TCCATTTCAAAATATAGTGCGCC 57.818 39.130 4.18 0.00 0.00 6.53
283 285 4.037446 TCCATTTCAAAATATAGTGCGCCC 59.963 41.667 4.18 0.00 0.00 6.13
284 286 3.684103 TTTCAAAATATAGTGCGCCCG 57.316 42.857 4.18 0.00 0.00 6.13
285 287 0.941542 TCAAAATATAGTGCGCCCGC 59.058 50.000 4.18 5.60 42.35 6.13
286 288 0.384230 CAAAATATAGTGCGCCCGCG 60.384 55.000 4.18 4.36 45.51 6.46
301 303 2.975799 GCGCTTTCCGTGGTCCAA 60.976 61.111 0.00 0.00 39.71 3.53
302 304 2.943653 CGCTTTCCGTGGTCCAAC 59.056 61.111 0.00 0.00 0.00 3.77
303 305 1.597027 CGCTTTCCGTGGTCCAACT 60.597 57.895 0.00 0.00 0.00 3.16
304 306 1.164041 CGCTTTCCGTGGTCCAACTT 61.164 55.000 0.00 0.00 0.00 2.66
305 307 0.310854 GCTTTCCGTGGTCCAACTTG 59.689 55.000 0.00 0.00 0.00 3.16
306 308 1.961793 CTTTCCGTGGTCCAACTTGA 58.038 50.000 0.00 0.00 0.00 3.02
307 309 1.602377 CTTTCCGTGGTCCAACTTGAC 59.398 52.381 0.00 0.00 34.42 3.18
321 323 7.662897 GTCCAACTTGACCATAAATTTAACCA 58.337 34.615 1.21 0.00 0.00 3.67
322 324 8.145122 GTCCAACTTGACCATAAATTTAACCAA 58.855 33.333 1.21 3.98 0.00 3.67
323 325 8.145122 TCCAACTTGACCATAAATTTAACCAAC 58.855 33.333 1.21 0.00 0.00 3.77
324 326 7.115663 CCAACTTGACCATAAATTTAACCAACG 59.884 37.037 1.21 0.00 0.00 4.10
325 327 7.513371 ACTTGACCATAAATTTAACCAACGA 57.487 32.000 1.21 0.00 0.00 3.85
326 328 7.590279 ACTTGACCATAAATTTAACCAACGAG 58.410 34.615 1.21 5.54 0.00 4.18
327 329 7.446013 ACTTGACCATAAATTTAACCAACGAGA 59.554 33.333 1.21 0.00 0.00 4.04
328 330 7.136289 TGACCATAAATTTAACCAACGAGAC 57.864 36.000 1.21 0.00 0.00 3.36
329 331 6.149807 TGACCATAAATTTAACCAACGAGACC 59.850 38.462 1.21 0.00 0.00 3.85
330 332 5.122711 ACCATAAATTTAACCAACGAGACCG 59.877 40.000 1.21 0.00 42.50 4.79
331 333 5.352016 CCATAAATTTAACCAACGAGACCGA 59.648 40.000 1.21 0.00 39.50 4.69
332 334 4.737353 AAATTTAACCAACGAGACCGAC 57.263 40.909 0.00 0.00 39.50 4.79
333 335 3.672767 ATTTAACCAACGAGACCGACT 57.327 42.857 0.00 0.00 39.50 4.18
334 336 2.427232 TTAACCAACGAGACCGACTG 57.573 50.000 0.00 0.00 39.50 3.51
335 337 0.038892 TAACCAACGAGACCGACTGC 60.039 55.000 0.00 0.00 39.50 4.40
336 338 2.805353 CCAACGAGACCGACTGCG 60.805 66.667 0.00 0.00 39.50 5.18
346 348 4.735132 CGACTGCGGCGGGAGAAA 62.735 66.667 19.55 0.00 35.29 2.52
347 349 2.358247 GACTGCGGCGGGAGAAAA 60.358 61.111 19.55 0.00 35.29 2.29
348 350 1.964373 GACTGCGGCGGGAGAAAAA 60.964 57.895 19.55 0.00 35.29 1.94
398 400 9.621629 TGAATATGAATTCACCGGTATAACTTT 57.378 29.630 11.07 0.00 45.17 2.66
401 403 5.945155 TGAATTCACCGGTATAACTTTTGC 58.055 37.500 6.87 0.00 0.00 3.68
402 404 5.708230 TGAATTCACCGGTATAACTTTTGCT 59.292 36.000 6.87 0.00 0.00 3.91
403 405 5.813080 ATTCACCGGTATAACTTTTGCTC 57.187 39.130 6.87 0.00 0.00 4.26
404 406 3.602483 TCACCGGTATAACTTTTGCTCC 58.398 45.455 6.87 0.00 0.00 4.70
405 407 2.681344 CACCGGTATAACTTTTGCTCCC 59.319 50.000 6.87 0.00 0.00 4.30
406 408 1.937899 CCGGTATAACTTTTGCTCCCG 59.062 52.381 0.00 0.00 0.00 5.14
407 409 1.329599 CGGTATAACTTTTGCTCCCGC 59.670 52.381 0.00 0.00 0.00 6.13
408 410 1.674441 GGTATAACTTTTGCTCCCGCC 59.326 52.381 0.00 0.00 34.43 6.13
409 411 1.329599 GTATAACTTTTGCTCCCGCCG 59.670 52.381 0.00 0.00 34.43 6.46
410 412 1.654023 ATAACTTTTGCTCCCGCCGC 61.654 55.000 0.00 0.00 34.43 6.53
411 413 4.887932 TATAACTTTTGCTCCCGCCGCA 62.888 50.000 0.00 0.00 35.22 5.69
412 414 4.107051 CTTTTGCTCCCGCCGCAG 62.107 66.667 0.00 0.00 38.80 5.18
413 415 4.947147 TTTTGCTCCCGCCGCAGT 62.947 61.111 0.00 0.00 38.80 4.40
425 427 2.805353 CGCAGTCGGTCTCGTTGG 60.805 66.667 0.00 0.00 37.69 3.77
426 428 2.338984 GCAGTCGGTCTCGTTGGT 59.661 61.111 0.00 0.00 37.69 3.67
427 429 1.733399 GCAGTCGGTCTCGTTGGTC 60.733 63.158 0.00 0.00 37.69 4.02
428 430 1.658114 CAGTCGGTCTCGTTGGTCA 59.342 57.895 0.00 0.00 37.69 4.02
429 431 0.031585 CAGTCGGTCTCGTTGGTCAA 59.968 55.000 0.00 0.00 37.69 3.18
430 432 0.748450 AGTCGGTCTCGTTGGTCAAA 59.252 50.000 0.00 0.00 37.69 2.69
431 433 1.343465 AGTCGGTCTCGTTGGTCAAAT 59.657 47.619 0.00 0.00 37.69 2.32
432 434 2.140717 GTCGGTCTCGTTGGTCAAATT 58.859 47.619 0.00 0.00 37.69 1.82
433 435 2.546789 GTCGGTCTCGTTGGTCAAATTT 59.453 45.455 0.00 0.00 37.69 1.82
434 436 3.742369 GTCGGTCTCGTTGGTCAAATTTA 59.258 43.478 0.00 0.00 37.69 1.40
435 437 4.390909 GTCGGTCTCGTTGGTCAAATTTAT 59.609 41.667 0.00 0.00 37.69 1.40
436 438 4.390603 TCGGTCTCGTTGGTCAAATTTATG 59.609 41.667 0.00 0.00 37.69 1.90
437 439 4.436852 CGGTCTCGTTGGTCAAATTTATGG 60.437 45.833 0.00 0.00 0.00 2.74
438 440 4.457949 GGTCTCGTTGGTCAAATTTATGGT 59.542 41.667 0.00 0.00 0.00 3.55
439 441 5.391629 GGTCTCGTTGGTCAAATTTATGGTC 60.392 44.000 0.00 0.00 0.00 4.02
440 442 5.180492 GTCTCGTTGGTCAAATTTATGGTCA 59.820 40.000 0.00 0.00 0.00 4.02
441 443 5.765677 TCTCGTTGGTCAAATTTATGGTCAA 59.234 36.000 0.00 0.00 0.00 3.18
442 444 6.263392 TCTCGTTGGTCAAATTTATGGTCAAA 59.737 34.615 0.00 0.00 0.00 2.69
443 445 6.442952 TCGTTGGTCAAATTTATGGTCAAAG 58.557 36.000 0.00 0.00 0.00 2.77
444 446 6.039941 TCGTTGGTCAAATTTATGGTCAAAGT 59.960 34.615 0.00 0.00 0.00 2.66
445 447 6.699642 CGTTGGTCAAATTTATGGTCAAAGTT 59.300 34.615 0.00 0.00 0.00 2.66
446 448 7.306515 CGTTGGTCAAATTTATGGTCAAAGTTG 60.307 37.037 0.00 3.17 42.09 3.16
447 449 7.353414 TGGTCAAATTTATGGTCAAAGTTGA 57.647 32.000 7.21 7.21 45.16 3.18
450 452 7.170828 GGTCAAATTTATGGTCAAAGTTGAACC 59.829 37.037 13.08 11.95 46.60 3.62
451 453 7.786030 TCAAATTTATGGTCAAAGTTGAACCA 58.214 30.769 11.02 11.02 44.69 3.67
452 454 7.708752 TCAAATTTATGGTCAAAGTTGAACCAC 59.291 33.333 10.88 0.00 44.69 4.16
453 455 4.822036 TTATGGTCAAAGTTGAACCACG 57.178 40.909 10.88 0.00 44.20 4.94
454 456 1.384525 TGGTCAAAGTTGAACCACGG 58.615 50.000 6.62 0.00 44.20 4.94
455 457 0.666374 GGTCAAAGTTGAACCACGGG 59.334 55.000 0.00 0.00 38.96 5.28
456 458 1.670791 GTCAAAGTTGAACCACGGGA 58.329 50.000 0.00 0.00 39.21 5.14
457 459 2.018515 GTCAAAGTTGAACCACGGGAA 58.981 47.619 0.00 0.00 39.21 3.97
458 460 2.621526 GTCAAAGTTGAACCACGGGAAT 59.378 45.455 0.00 0.00 39.21 3.01
459 461 3.816523 GTCAAAGTTGAACCACGGGAATA 59.183 43.478 0.00 0.00 39.21 1.75
460 462 4.069304 TCAAAGTTGAACCACGGGAATAG 58.931 43.478 0.00 0.00 33.55 1.73
461 463 4.069304 CAAAGTTGAACCACGGGAATAGA 58.931 43.478 0.00 0.00 0.00 1.98
462 464 4.569719 AAGTTGAACCACGGGAATAGAT 57.430 40.909 0.00 0.00 0.00 1.98
463 465 3.873910 AGTTGAACCACGGGAATAGATG 58.126 45.455 0.00 0.00 0.00 2.90
464 466 3.517901 AGTTGAACCACGGGAATAGATGA 59.482 43.478 0.00 0.00 0.00 2.92
465 467 4.019681 AGTTGAACCACGGGAATAGATGAA 60.020 41.667 0.00 0.00 0.00 2.57
466 468 4.137116 TGAACCACGGGAATAGATGAAG 57.863 45.455 0.00 0.00 0.00 3.02
467 469 2.622064 ACCACGGGAATAGATGAAGC 57.378 50.000 0.00 0.00 0.00 3.86
468 470 1.202533 ACCACGGGAATAGATGAAGCG 60.203 52.381 0.00 0.00 0.00 4.68
469 471 0.861837 CACGGGAATAGATGAAGCGC 59.138 55.000 0.00 0.00 0.00 5.92
470 472 0.753262 ACGGGAATAGATGAAGCGCT 59.247 50.000 2.64 2.64 0.00 5.92
471 473 1.961394 ACGGGAATAGATGAAGCGCTA 59.039 47.619 12.05 0.00 0.00 4.26
472 474 2.563179 ACGGGAATAGATGAAGCGCTAT 59.437 45.455 12.05 0.00 0.00 2.97
473 475 3.762288 ACGGGAATAGATGAAGCGCTATA 59.238 43.478 12.05 2.38 0.00 1.31
474 476 4.402793 ACGGGAATAGATGAAGCGCTATAT 59.597 41.667 12.05 8.40 0.00 0.86
475 477 5.105310 ACGGGAATAGATGAAGCGCTATATT 60.105 40.000 12.05 10.59 0.00 1.28
476 478 5.812642 CGGGAATAGATGAAGCGCTATATTT 59.187 40.000 12.05 6.21 0.00 1.40
477 479 6.313905 CGGGAATAGATGAAGCGCTATATTTT 59.686 38.462 12.05 0.00 0.00 1.82
478 480 7.467623 GGGAATAGATGAAGCGCTATATTTTG 58.532 38.462 12.05 0.00 0.00 2.44
479 481 7.334421 GGGAATAGATGAAGCGCTATATTTTGA 59.666 37.037 12.05 0.00 0.00 2.69
480 482 8.721478 GGAATAGATGAAGCGCTATATTTTGAA 58.279 33.333 12.05 0.00 0.00 2.69
484 486 8.158169 AGATGAAGCGCTATATTTTGAAATGA 57.842 30.769 12.05 0.00 0.00 2.57
485 487 8.623903 AGATGAAGCGCTATATTTTGAAATGAA 58.376 29.630 12.05 0.00 0.00 2.57
486 488 8.792831 ATGAAGCGCTATATTTTGAAATGAAG 57.207 30.769 12.05 0.00 0.00 3.02
487 489 7.195646 TGAAGCGCTATATTTTGAAATGAAGG 58.804 34.615 12.05 0.00 0.00 3.46
488 490 6.076981 AGCGCTATATTTTGAAATGAAGGG 57.923 37.500 8.99 6.08 32.55 3.95
489 491 5.827797 AGCGCTATATTTTGAAATGAAGGGA 59.172 36.000 8.99 0.00 31.80 4.20
490 492 6.016777 AGCGCTATATTTTGAAATGAAGGGAG 60.017 38.462 8.99 0.00 31.80 4.30
491 493 6.238759 GCGCTATATTTTGAAATGAAGGGAGT 60.239 38.462 0.00 0.00 31.80 3.85
492 494 7.041372 GCGCTATATTTTGAAATGAAGGGAGTA 60.041 37.037 0.00 0.00 31.80 2.59
493 495 8.499162 CGCTATATTTTGAAATGAAGGGAGTAG 58.501 37.037 0.00 0.00 31.80 2.57
494 496 9.343539 GCTATATTTTGAAATGAAGGGAGTAGT 57.656 33.333 0.00 0.00 0.00 2.73
540 542 2.355444 TGATGGCTATGCAATCAACACG 59.645 45.455 7.11 0.00 44.81 4.49
604 607 8.650490 ACAAAAACAATCCATGAACTAAAGGAT 58.350 29.630 0.00 0.00 42.46 3.24
607 610 9.710900 AAAACAATCCATGAACTAAAGGATTTC 57.289 29.630 0.00 0.00 45.91 2.17
608 611 8.655935 AACAATCCATGAACTAAAGGATTTCT 57.344 30.769 0.00 0.00 45.91 2.52
610 613 7.890127 ACAATCCATGAACTAAAGGATTTCTGA 59.110 33.333 0.00 0.00 45.91 3.27
612 615 7.687941 TCCATGAACTAAAGGATTTCTGAAC 57.312 36.000 0.00 0.00 40.09 3.18
615 618 9.177608 CCATGAACTAAAGGATTTCTGAACATA 57.822 33.333 0.00 0.00 40.09 2.29
618 621 9.010029 TGAACTAAAGGATTTCTGAACATAACC 57.990 33.333 0.00 0.00 40.09 2.85
619 622 7.939784 ACTAAAGGATTTCTGAACATAACCC 57.060 36.000 0.00 0.00 40.09 4.11
620 623 7.699878 ACTAAAGGATTTCTGAACATAACCCT 58.300 34.615 0.00 0.00 40.09 4.34
621 624 8.170730 ACTAAAGGATTTCTGAACATAACCCTT 58.829 33.333 0.00 0.00 40.09 3.95
622 625 6.840780 AAGGATTTCTGAACATAACCCTTG 57.159 37.500 0.00 0.00 31.07 3.61
623 626 5.892348 AGGATTTCTGAACATAACCCTTGT 58.108 37.500 0.00 0.00 0.00 3.16
625 628 7.466804 AGGATTTCTGAACATAACCCTTGTAA 58.533 34.615 0.00 0.00 0.00 2.41
626 629 7.611855 AGGATTTCTGAACATAACCCTTGTAAG 59.388 37.037 0.00 0.00 0.00 2.34
627 630 7.393515 GGATTTCTGAACATAACCCTTGTAAGT 59.606 37.037 0.00 0.00 0.00 2.24
628 631 9.444600 GATTTCTGAACATAACCCTTGTAAGTA 57.555 33.333 0.00 0.00 0.00 2.24
629 632 8.611654 TTTCTGAACATAACCCTTGTAAGTAC 57.388 34.615 0.00 0.00 0.00 2.73
630 633 7.549147 TCTGAACATAACCCTTGTAAGTACT 57.451 36.000 0.00 0.00 0.00 2.73
631 634 7.609056 TCTGAACATAACCCTTGTAAGTACTC 58.391 38.462 0.00 0.00 0.00 2.59
632 635 7.453752 TCTGAACATAACCCTTGTAAGTACTCT 59.546 37.037 0.00 0.00 0.00 3.24
633 636 7.609056 TGAACATAACCCTTGTAAGTACTCTC 58.391 38.462 0.00 0.00 0.00 3.20
634 637 7.453752 TGAACATAACCCTTGTAAGTACTCTCT 59.546 37.037 0.00 0.00 0.00 3.10
635 638 7.407393 ACATAACCCTTGTAAGTACTCTCTC 57.593 40.000 0.00 0.00 0.00 3.20
636 639 6.380560 ACATAACCCTTGTAAGTACTCTCTCC 59.619 42.308 0.00 0.00 0.00 3.71
637 640 4.399483 ACCCTTGTAAGTACTCTCTCCA 57.601 45.455 0.00 0.00 0.00 3.86
638 641 4.949121 ACCCTTGTAAGTACTCTCTCCAT 58.051 43.478 0.00 0.00 0.00 3.41
639 642 6.088541 ACCCTTGTAAGTACTCTCTCCATA 57.911 41.667 0.00 0.00 0.00 2.74
640 643 6.500336 ACCCTTGTAAGTACTCTCTCCATAA 58.500 40.000 0.00 0.00 0.00 1.90
641 644 6.958192 ACCCTTGTAAGTACTCTCTCCATAAA 59.042 38.462 0.00 0.00 0.00 1.40
642 645 7.124448 ACCCTTGTAAGTACTCTCTCCATAAAG 59.876 40.741 0.00 0.00 0.00 1.85
643 646 7.342284 CCCTTGTAAGTACTCTCTCCATAAAGA 59.658 40.741 0.00 0.00 0.00 2.52
644 647 8.750298 CCTTGTAAGTACTCTCTCCATAAAGAA 58.250 37.037 0.00 0.00 0.00 2.52
654 657 8.811994 ACTCTCTCCATAAAGAAATATAGGAGC 58.188 37.037 0.00 0.00 40.66 4.70
655 658 8.727100 TCTCTCCATAAAGAAATATAGGAGCA 57.273 34.615 0.00 0.00 40.66 4.26
656 659 9.331466 TCTCTCCATAAAGAAATATAGGAGCAT 57.669 33.333 0.00 0.00 40.66 3.79
657 660 9.956640 CTCTCCATAAAGAAATATAGGAGCATT 57.043 33.333 0.00 0.00 40.66 3.56
667 670 9.061435 AGAAATATAGGAGCATTTAGAAAGTGC 57.939 33.333 0.00 0.00 39.10 4.40
668 671 8.752005 AAATATAGGAGCATTTAGAAAGTGCA 57.248 30.769 9.38 0.00 41.19 4.57
669 672 8.930846 AATATAGGAGCATTTAGAAAGTGCAT 57.069 30.769 9.38 0.00 41.19 3.96
672 675 8.930846 ATAGGAGCATTTAGAAAGTGCATAAT 57.069 30.769 9.38 0.00 41.19 1.28
673 676 7.035840 AGGAGCATTTAGAAAGTGCATAATG 57.964 36.000 9.38 0.00 41.19 1.90
674 677 6.830324 AGGAGCATTTAGAAAGTGCATAATGA 59.170 34.615 9.38 0.00 41.19 2.57
675 678 6.914757 GGAGCATTTAGAAAGTGCATAATGAC 59.085 38.462 9.38 0.00 41.19 3.06
676 679 7.395190 AGCATTTAGAAAGTGCATAATGACA 57.605 32.000 9.38 0.00 41.19 3.58
677 680 7.253422 AGCATTTAGAAAGTGCATAATGACAC 58.747 34.615 9.38 0.00 41.19 3.67
679 682 8.397906 GCATTTAGAAAGTGCATAATGACACTA 58.602 33.333 6.10 0.00 46.17 2.74
712 715 4.390603 TGTTTCCTTCGAATTGATACGGTG 59.609 41.667 0.00 0.00 0.00 4.94
714 717 3.517602 TCCTTCGAATTGATACGGTGTG 58.482 45.455 0.00 0.00 0.00 3.82
736 739 2.978489 GCGCACAGTAATAGTACGATCC 59.022 50.000 0.30 0.00 35.20 3.36
737 740 3.304525 GCGCACAGTAATAGTACGATCCT 60.305 47.826 0.30 0.00 35.20 3.24
739 742 4.675565 CGCACAGTAATAGTACGATCCTTG 59.324 45.833 0.00 0.00 35.20 3.61
740 743 4.982916 GCACAGTAATAGTACGATCCTTGG 59.017 45.833 0.00 0.00 35.20 3.61
741 744 5.529791 CACAGTAATAGTACGATCCTTGGG 58.470 45.833 0.00 0.00 35.20 4.12
852 856 2.908015 GGATAAGACCGGCCAGCA 59.092 61.111 0.00 0.00 0.00 4.41
854 858 1.220749 GATAAGACCGGCCAGCACA 59.779 57.895 0.00 0.00 0.00 4.57
912 918 2.913578 ACGCCGTACCTGTCACCA 60.914 61.111 0.00 0.00 0.00 4.17
927 933 2.091665 GTCACCATCCATTCCCATTCCT 60.092 50.000 0.00 0.00 0.00 3.36
928 934 3.138283 GTCACCATCCATTCCCATTCCTA 59.862 47.826 0.00 0.00 0.00 2.94
929 935 3.989558 TCACCATCCATTCCCATTCCTAT 59.010 43.478 0.00 0.00 0.00 2.57
932 938 3.309410 CCATCCATTCCCATTCCTATCCC 60.309 52.174 0.00 0.00 0.00 3.85
933 939 3.087956 TCCATTCCCATTCCTATCCCA 57.912 47.619 0.00 0.00 0.00 4.37
977 1005 1.619977 CGAGAGGGGAAGAGGAGGAAA 60.620 57.143 0.00 0.00 0.00 3.13
1360 1391 1.885049 CAGATGGGGAGGAGAGGAAA 58.115 55.000 0.00 0.00 0.00 3.13
1390 1421 1.153745 CGTCAAGAAGAGCGGAGGG 60.154 63.158 0.00 0.00 0.00 4.30
1544 1575 2.408022 CTCGCTAAGGGACCGACG 59.592 66.667 0.00 0.00 0.00 5.12
1546 1577 1.651240 CTCGCTAAGGGACCGACGAA 61.651 60.000 0.00 0.00 0.00 3.85
1549 1580 1.514553 CTAAGGGACCGACGAACCC 59.485 63.158 17.47 17.47 43.55 4.11
1561 1594 3.192922 GAACCCCGTCATTCCGCG 61.193 66.667 0.00 0.00 0.00 6.46
1596 1630 8.303156 TCGATCTTGGCATAAATGAAAGAAAAA 58.697 29.630 10.64 1.13 36.37 1.94
1597 1631 9.090692 CGATCTTGGCATAAATGAAAGAAAAAT 57.909 29.630 10.64 0.00 36.37 1.82
1640 1678 2.525055 CTAGTTGTCTTGCGAGCTCTC 58.475 52.381 12.85 4.04 0.00 3.20
1656 1694 2.806382 GCTCTCCTGCTCTCAATTAGCC 60.806 54.545 0.00 0.00 39.30 3.93
1664 1702 4.588899 TGCTCTCAATTAGCCTTGCTTAA 58.411 39.130 0.00 0.00 40.44 1.85
1665 1703 5.195940 TGCTCTCAATTAGCCTTGCTTAAT 58.804 37.500 0.00 0.00 40.44 1.40
1669 1707 7.325660 TCTCAATTAGCCTTGCTTAATCTTG 57.674 36.000 0.00 0.00 40.44 3.02
1670 1708 6.886459 TCTCAATTAGCCTTGCTTAATCTTGT 59.114 34.615 0.00 0.00 40.44 3.16
1672 1710 7.315142 TCAATTAGCCTTGCTTAATCTTGTTG 58.685 34.615 0.00 0.00 40.44 3.33
1674 1712 4.510038 AGCCTTGCTTAATCTTGTTGTG 57.490 40.909 0.00 0.00 33.89 3.33
1675 1713 3.891366 AGCCTTGCTTAATCTTGTTGTGT 59.109 39.130 0.00 0.00 33.89 3.72
1676 1714 4.022849 AGCCTTGCTTAATCTTGTTGTGTC 60.023 41.667 0.00 0.00 33.89 3.67
1677 1715 4.466828 CCTTGCTTAATCTTGTTGTGTCG 58.533 43.478 0.00 0.00 0.00 4.35
1678 1716 4.024048 CCTTGCTTAATCTTGTTGTGTCGT 60.024 41.667 0.00 0.00 0.00 4.34
1679 1717 4.725556 TGCTTAATCTTGTTGTGTCGTC 57.274 40.909 0.00 0.00 0.00 4.20
1682 1720 4.383649 GCTTAATCTTGTTGTGTCGTCGTA 59.616 41.667 0.00 0.00 0.00 3.43
1686 1732 3.772932 TCTTGTTGTGTCGTCGTAGTTT 58.227 40.909 0.00 0.00 0.00 2.66
1687 1733 3.548668 TCTTGTTGTGTCGTCGTAGTTTG 59.451 43.478 0.00 0.00 0.00 2.93
1693 1739 4.175516 TGTGTCGTCGTAGTTTGAGTTTT 58.824 39.130 0.00 0.00 0.00 2.43
1698 1744 3.362693 CGTCGTAGTTTGAGTTTTCAGCC 60.363 47.826 0.00 0.00 34.15 4.85
1699 1745 3.558418 GTCGTAGTTTGAGTTTTCAGCCA 59.442 43.478 0.00 0.00 34.15 4.75
1708 1754 3.748048 TGAGTTTTCAGCCAAAGATCGAG 59.252 43.478 0.00 0.00 0.00 4.04
1709 1755 2.485814 AGTTTTCAGCCAAAGATCGAGC 59.514 45.455 0.00 0.00 0.00 5.03
1730 1779 1.358725 GAGGTCAATTGCGCTGCGTA 61.359 55.000 24.04 17.28 0.00 4.42
1732 1781 0.589729 GGTCAATTGCGCTGCGTATG 60.590 55.000 24.04 15.07 0.00 2.39
1736 1785 0.521291 AATTGCGCTGCGTATGTGTT 59.479 45.000 24.04 8.99 0.00 3.32
1740 1789 1.626654 GCGCTGCGTATGTGTTCAGT 61.627 55.000 24.04 0.00 0.00 3.41
1741 1790 0.790207 CGCTGCGTATGTGTTCAGTT 59.210 50.000 14.93 0.00 0.00 3.16
1753 1802 5.749596 TGTGTTCAGTTGTCTGTAAATGG 57.250 39.130 0.00 0.00 41.91 3.16
1780 1832 8.691797 TGTAGTGTGTAATAAGATGCAGTGATA 58.308 33.333 0.00 0.00 0.00 2.15
1786 1838 8.285394 GTGTAATAAGATGCAGTGATACAATGG 58.715 37.037 0.00 0.00 29.66 3.16
1793 1847 4.136796 TGCAGTGATACAATGGCTATTCC 58.863 43.478 0.00 0.00 29.66 3.01
1824 1878 0.664224 TTTCCGGTTTTCGTTGCCTC 59.336 50.000 0.00 0.00 37.11 4.70
1841 1895 1.376543 CTCATCTTTGGCGCTGTGAT 58.623 50.000 7.64 3.62 0.00 3.06
1842 1896 1.741706 CTCATCTTTGGCGCTGTGATT 59.258 47.619 7.64 0.00 0.00 2.57
1844 1898 2.557924 TCATCTTTGGCGCTGTGATTTT 59.442 40.909 7.64 0.00 0.00 1.82
1845 1899 2.420628 TCTTTGGCGCTGTGATTTTG 57.579 45.000 7.64 0.00 0.00 2.44
1848 1902 3.316588 TCTTTGGCGCTGTGATTTTGTTA 59.683 39.130 7.64 0.00 0.00 2.41
1852 1906 3.067461 TGGCGCTGTGATTTTGTTAAACT 59.933 39.130 7.64 0.00 0.00 2.66
1880 1934 7.391275 TGAAAGATAGAGCATGAAACACAATGA 59.609 33.333 0.00 0.00 0.00 2.57
1886 1940 5.358725 AGAGCATGAAACACAATGATGCATA 59.641 36.000 0.00 0.00 34.44 3.14
1889 1943 7.143340 AGCATGAAACACAATGATGCATATAC 58.857 34.615 0.00 0.00 34.44 1.47
1902 1956 9.780186 AATGATGCATATACATATCTGATGGAG 57.220 33.333 0.00 0.00 0.00 3.86
1903 1957 8.543293 TGATGCATATACATATCTGATGGAGA 57.457 34.615 0.00 0.00 34.25 3.71
1913 1998 6.099413 ACATATCTGATGGAGAAAAGCAGAGA 59.901 38.462 0.00 0.00 38.79 3.10
1918 2003 5.563592 TGATGGAGAAAAGCAGAGATTCAA 58.436 37.500 0.00 0.00 0.00 2.69
1920 2005 4.978099 TGGAGAAAAGCAGAGATTCAACT 58.022 39.130 0.00 0.00 0.00 3.16
1934 2019 4.946157 AGATTCAACTTCGCAATCCAGAAT 59.054 37.500 0.00 0.00 0.00 2.40
1950 2035 4.935885 CAGAATGACTAAACTGGACTGC 57.064 45.455 0.00 0.00 39.69 4.40
1963 2048 7.856145 AAACTGGACTGCTATTTGAGATAAG 57.144 36.000 0.00 0.00 0.00 1.73
2003 2099 5.317733 GCTCTCGGCATCTGTTATACTAT 57.682 43.478 0.00 0.00 41.35 2.12
2004 2100 5.098893 GCTCTCGGCATCTGTTATACTATG 58.901 45.833 0.00 0.00 41.35 2.23
2006 2102 6.650427 TCTCGGCATCTGTTATACTATGTT 57.350 37.500 0.00 0.00 0.00 2.71
2007 2103 6.678878 TCTCGGCATCTGTTATACTATGTTC 58.321 40.000 0.00 0.00 0.00 3.18
2009 2105 6.447162 TCGGCATCTGTTATACTATGTTCAG 58.553 40.000 0.00 0.00 0.00 3.02
2032 2129 7.996644 TCAGACTTTTTATGGAGTAAAACCTGT 59.003 33.333 0.00 0.00 40.88 4.00
2045 2142 6.655930 AGTAAAACCTGTACACTTGGAAGAA 58.344 36.000 6.63 0.00 0.00 2.52
2055 2152 3.071167 ACACTTGGAAGAAGAGTGGGTAC 59.929 47.826 7.53 0.00 43.81 3.34
2077 2178 3.487042 CCAAGCTGCTGAATCAATCTTCG 60.487 47.826 1.35 0.00 0.00 3.79
2117 2218 5.355071 CCTGCTATGTACTTTTGCATTGAGA 59.645 40.000 8.70 0.00 33.02 3.27
2146 2247 1.067821 CCCTCGGTCAGAGCTGTTATC 59.932 57.143 0.00 0.00 45.54 1.75
2151 2254 2.952978 CGGTCAGAGCTGTTATCTACCT 59.047 50.000 0.00 0.00 0.00 3.08
2152 2255 3.381908 CGGTCAGAGCTGTTATCTACCTT 59.618 47.826 0.00 0.00 0.00 3.50
2155 2260 3.961408 TCAGAGCTGTTATCTACCTTCCC 59.039 47.826 0.00 0.00 0.00 3.97
2157 2262 4.038642 CAGAGCTGTTATCTACCTTCCCTC 59.961 50.000 0.00 0.00 0.00 4.30
2166 2271 0.702902 TACCTTCCCTCGGTCAGTCT 59.297 55.000 0.00 0.00 35.98 3.24
2218 2323 0.109597 CAGCGCCACAGAAACATTCC 60.110 55.000 2.29 0.00 0.00 3.01
2236 2341 0.240945 CCGTCTGTGGACCAAAATGC 59.759 55.000 0.00 0.00 39.15 3.56
2239 2344 0.961019 TCTGTGGACCAAAATGCTGC 59.039 50.000 0.00 0.00 0.00 5.25
2241 2346 0.675083 TGTGGACCAAAATGCTGCTG 59.325 50.000 0.00 0.00 0.00 4.41
2260 2365 1.559682 TGGAAGCTACAAGATGGACCC 59.440 52.381 0.00 0.00 0.00 4.46
2303 2416 7.500992 ACATCATAAAACATCTATCGTGAGGT 58.499 34.615 0.00 0.00 31.96 3.85
2304 2417 7.653713 ACATCATAAAACATCTATCGTGAGGTC 59.346 37.037 0.00 0.00 30.23 3.85
2311 2424 5.626142 ACATCTATCGTGAGGTCACTAGAT 58.374 41.667 12.74 12.74 41.25 1.98
2327 2440 7.230510 GGTCACTAGATCATCTCTTCTGTGTAT 59.769 40.741 0.00 0.00 35.28 2.29
2345 2458 7.865385 TCTGTGTATTTGCAACACTAATTTTCC 59.135 33.333 18.33 0.00 45.95 3.13
2359 2473 8.806146 ACACTAATTTTCCAAGTGAAGCAATAT 58.194 29.630 11.38 0.00 42.59 1.28
2364 2478 7.630242 TTTTCCAAGTGAAGCAATATAGGAG 57.370 36.000 0.00 0.00 33.63 3.69
2366 2480 6.560003 TCCAAGTGAAGCAATATAGGAGAA 57.440 37.500 0.00 0.00 0.00 2.87
2368 2482 6.156949 TCCAAGTGAAGCAATATAGGAGAAGT 59.843 38.462 0.00 0.00 0.00 3.01
2408 2523 8.695456 CCCAATGCTAAATATTTTACTCAGGTT 58.305 33.333 5.91 0.00 0.00 3.50
2418 2533 6.992063 ATTTTACTCAGGTTCAGTGCTATG 57.008 37.500 0.00 0.00 0.00 2.23
2438 2553 7.828717 TGCTATGTGTCAAAGATAAATCCAGAA 59.171 33.333 0.00 0.00 0.00 3.02
2448 2563 5.087323 AGATAAATCCAGAATCTAGGGCGA 58.913 41.667 0.00 0.00 0.00 5.54
2449 2564 3.760580 AAATCCAGAATCTAGGGCGAG 57.239 47.619 0.00 0.00 0.00 5.03
2450 2565 2.685106 ATCCAGAATCTAGGGCGAGA 57.315 50.000 0.00 0.00 0.00 4.04
2451 2566 2.454336 TCCAGAATCTAGGGCGAGAA 57.546 50.000 0.00 0.00 0.00 2.87
2452 2567 2.964209 TCCAGAATCTAGGGCGAGAAT 58.036 47.619 0.00 0.00 0.00 2.40
2453 2568 3.309296 TCCAGAATCTAGGGCGAGAATT 58.691 45.455 0.00 0.00 0.00 2.17
2454 2569 3.070159 TCCAGAATCTAGGGCGAGAATTG 59.930 47.826 0.00 0.00 0.00 2.32
2473 2588 2.274920 GCATTTCTGCTTCAGCTTCC 57.725 50.000 0.00 0.00 45.32 3.46
2474 2589 1.135170 GCATTTCTGCTTCAGCTTCCC 60.135 52.381 0.00 0.00 45.32 3.97
2475 2590 1.475682 CATTTCTGCTTCAGCTTCCCC 59.524 52.381 0.00 0.00 42.66 4.81
2476 2591 0.606401 TTTCTGCTTCAGCTTCCCCG 60.606 55.000 0.00 0.00 42.66 5.73
2477 2592 2.437359 CTGCTTCAGCTTCCCCGG 60.437 66.667 0.00 0.00 42.66 5.73
2478 2593 3.249189 TGCTTCAGCTTCCCCGGT 61.249 61.111 0.00 0.00 42.66 5.28
2479 2594 2.034221 GCTTCAGCTTCCCCGGTT 59.966 61.111 0.00 0.00 38.21 4.44
2480 2595 1.603739 GCTTCAGCTTCCCCGGTTT 60.604 57.895 0.00 0.00 38.21 3.27
2481 2596 0.322187 GCTTCAGCTTCCCCGGTTTA 60.322 55.000 0.00 0.00 38.21 2.01
2482 2597 1.739067 CTTCAGCTTCCCCGGTTTAG 58.261 55.000 0.00 0.00 0.00 1.85
2483 2598 1.003233 CTTCAGCTTCCCCGGTTTAGT 59.997 52.381 0.00 0.00 0.00 2.24
2484 2599 1.061546 TCAGCTTCCCCGGTTTAGTT 58.938 50.000 0.00 0.00 0.00 2.24
2485 2600 1.165270 CAGCTTCCCCGGTTTAGTTG 58.835 55.000 0.00 0.00 0.00 3.16
2486 2601 0.037734 AGCTTCCCCGGTTTAGTTGG 59.962 55.000 0.00 0.00 0.00 3.77
2487 2602 0.251033 GCTTCCCCGGTTTAGTTGGT 60.251 55.000 0.00 0.00 0.00 3.67
2488 2603 1.820483 GCTTCCCCGGTTTAGTTGGTT 60.820 52.381 0.00 0.00 0.00 3.67
2489 2604 2.589720 CTTCCCCGGTTTAGTTGGTTT 58.410 47.619 0.00 0.00 0.00 3.27
2490 2605 1.984066 TCCCCGGTTTAGTTGGTTTG 58.016 50.000 0.00 0.00 0.00 2.93
2491 2606 0.963225 CCCCGGTTTAGTTGGTTTGG 59.037 55.000 0.00 0.00 0.00 3.28
2492 2607 1.479021 CCCCGGTTTAGTTGGTTTGGA 60.479 52.381 0.00 0.00 0.00 3.53
2493 2608 1.883926 CCCGGTTTAGTTGGTTTGGAG 59.116 52.381 0.00 0.00 0.00 3.86
2494 2609 1.883926 CCGGTTTAGTTGGTTTGGAGG 59.116 52.381 0.00 0.00 0.00 4.30
2495 2610 1.268625 CGGTTTAGTTGGTTTGGAGGC 59.731 52.381 0.00 0.00 0.00 4.70
2496 2611 1.268625 GGTTTAGTTGGTTTGGAGGCG 59.731 52.381 0.00 0.00 0.00 5.52
2497 2612 1.268625 GTTTAGTTGGTTTGGAGGCGG 59.731 52.381 0.00 0.00 0.00 6.13
2498 2613 0.475044 TTAGTTGGTTTGGAGGCGGT 59.525 50.000 0.00 0.00 0.00 5.68
2499 2614 0.475044 TAGTTGGTTTGGAGGCGGTT 59.525 50.000 0.00 0.00 0.00 4.44
2500 2615 0.475044 AGTTGGTTTGGAGGCGGTTA 59.525 50.000 0.00 0.00 0.00 2.85
2501 2616 1.133730 AGTTGGTTTGGAGGCGGTTAA 60.134 47.619 0.00 0.00 0.00 2.01
2502 2617 1.890489 GTTGGTTTGGAGGCGGTTAAT 59.110 47.619 0.00 0.00 0.00 1.40
2503 2618 1.828979 TGGTTTGGAGGCGGTTAATC 58.171 50.000 0.00 0.00 0.00 1.75
2504 2619 1.353022 TGGTTTGGAGGCGGTTAATCT 59.647 47.619 0.00 0.00 0.00 2.40
2505 2620 1.743394 GGTTTGGAGGCGGTTAATCTG 59.257 52.381 0.00 0.00 0.00 2.90
2506 2621 1.743394 GTTTGGAGGCGGTTAATCTGG 59.257 52.381 0.00 0.00 0.00 3.86
2507 2622 0.393808 TTGGAGGCGGTTAATCTGGC 60.394 55.000 3.31 3.31 46.66 4.85
2512 2627 2.841442 GGCGGTTAATCTGGCTATCT 57.159 50.000 4.06 0.00 43.52 1.98
2513 2628 3.127425 GGCGGTTAATCTGGCTATCTT 57.873 47.619 4.06 0.00 43.52 2.40
2514 2629 3.477530 GGCGGTTAATCTGGCTATCTTT 58.522 45.455 4.06 0.00 43.52 2.52
2515 2630 3.883489 GGCGGTTAATCTGGCTATCTTTT 59.117 43.478 4.06 0.00 43.52 2.27
2516 2631 5.061179 GGCGGTTAATCTGGCTATCTTTTA 58.939 41.667 4.06 0.00 43.52 1.52
2517 2632 5.049612 GGCGGTTAATCTGGCTATCTTTTAC 60.050 44.000 4.06 0.00 43.52 2.01
2518 2633 5.758784 GCGGTTAATCTGGCTATCTTTTACT 59.241 40.000 0.00 0.00 0.00 2.24
2519 2634 6.073711 GCGGTTAATCTGGCTATCTTTTACTC 60.074 42.308 0.00 0.00 0.00 2.59
2520 2635 6.424207 CGGTTAATCTGGCTATCTTTTACTCC 59.576 42.308 0.00 0.00 0.00 3.85
2521 2636 6.711194 GGTTAATCTGGCTATCTTTTACTCCC 59.289 42.308 0.00 0.00 0.00 4.30
2522 2637 7.420330 GGTTAATCTGGCTATCTTTTACTCCCT 60.420 40.741 0.00 0.00 0.00 4.20
2523 2638 5.816955 ATCTGGCTATCTTTTACTCCCTC 57.183 43.478 0.00 0.00 0.00 4.30
2524 2639 3.637229 TCTGGCTATCTTTTACTCCCTCG 59.363 47.826 0.00 0.00 0.00 4.63
2525 2640 2.698797 TGGCTATCTTTTACTCCCTCGG 59.301 50.000 0.00 0.00 0.00 4.63
2526 2641 2.699321 GGCTATCTTTTACTCCCTCGGT 59.301 50.000 0.00 0.00 0.00 4.69
2527 2642 3.243805 GGCTATCTTTTACTCCCTCGGTC 60.244 52.174 0.00 0.00 0.00 4.79
2528 2643 3.243805 GCTATCTTTTACTCCCTCGGTCC 60.244 52.174 0.00 0.00 0.00 4.46
2529 2644 1.565067 TCTTTTACTCCCTCGGTCCC 58.435 55.000 0.00 0.00 0.00 4.46
2530 2645 1.203212 TCTTTTACTCCCTCGGTCCCA 60.203 52.381 0.00 0.00 0.00 4.37
2531 2646 1.838077 CTTTTACTCCCTCGGTCCCAT 59.162 52.381 0.00 0.00 0.00 4.00
2532 2647 2.852714 TTTACTCCCTCGGTCCCATA 57.147 50.000 0.00 0.00 0.00 2.74
2533 2648 2.852714 TTACTCCCTCGGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
2534 2649 3.339713 TTACTCCCTCGGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 7.276658 CACTAGATGAGTTGTGGAATTACACTC 59.723 40.741 21.32 13.93 38.09 3.51
9 10 7.334421 GCTTTCACTAGATGAGTTGTGGAATTA 59.666 37.037 0.00 0.00 38.99 1.40
50 51 9.987272 CACCTAGTACTTTCATGATATTGATGA 57.013 33.333 0.00 0.00 0.00 2.92
65 66 6.717289 TCATTAACCAATGCACCTAGTACTT 58.283 36.000 0.00 0.00 41.21 2.24
131 133 5.237344 GGGAGATGGATAGAAAACAACATCG 59.763 44.000 0.00 0.00 39.59 3.84
139 141 9.934784 TTATGAAATTGGGAGATGGATAGAAAA 57.065 29.630 0.00 0.00 0.00 2.29
228 230 7.731054 ACTCCTAGGTTAGAGAATATGCTTTG 58.269 38.462 9.08 0.00 0.00 2.77
233 235 8.570068 GGAGTACTCCTAGGTTAGAGAATATG 57.430 42.308 31.12 0.00 46.16 1.78
255 257 6.293626 CGCACTATATTTTGAAATGGAGGGAG 60.294 42.308 0.00 0.00 0.00 4.30
259 261 5.215160 GGCGCACTATATTTTGAAATGGAG 58.785 41.667 10.83 0.06 0.00 3.86
260 262 4.037446 GGGCGCACTATATTTTGAAATGGA 59.963 41.667 10.83 0.00 0.00 3.41
261 263 4.298332 GGGCGCACTATATTTTGAAATGG 58.702 43.478 10.83 0.00 0.00 3.16
262 264 3.974401 CGGGCGCACTATATTTTGAAATG 59.026 43.478 8.62 0.00 0.00 2.32
263 265 3.550030 GCGGGCGCACTATATTTTGAAAT 60.550 43.478 8.62 0.00 41.49 2.17
264 266 2.223386 GCGGGCGCACTATATTTTGAAA 60.223 45.455 8.62 0.00 41.49 2.69
265 267 1.332375 GCGGGCGCACTATATTTTGAA 59.668 47.619 8.62 0.00 41.49 2.69
266 268 0.941542 GCGGGCGCACTATATTTTGA 59.058 50.000 8.62 0.00 41.49 2.69
267 269 0.384230 CGCGGGCGCACTATATTTTG 60.384 55.000 8.62 0.00 42.06 2.44
268 270 1.938861 CGCGGGCGCACTATATTTT 59.061 52.632 8.62 0.00 42.06 1.82
269 271 3.637714 CGCGGGCGCACTATATTT 58.362 55.556 8.62 0.00 42.06 1.40
284 286 2.975799 TTGGACCACGGAAAGCGC 60.976 61.111 0.00 0.00 0.00 5.92
285 287 1.164041 AAGTTGGACCACGGAAAGCG 61.164 55.000 0.00 0.00 0.00 4.68
286 288 0.310854 CAAGTTGGACCACGGAAAGC 59.689 55.000 0.00 0.00 0.00 3.51
287 289 1.602377 GTCAAGTTGGACCACGGAAAG 59.398 52.381 2.34 0.00 0.00 2.62
288 290 1.670791 GTCAAGTTGGACCACGGAAA 58.329 50.000 2.34 0.00 0.00 3.13
289 291 3.390003 GTCAAGTTGGACCACGGAA 57.610 52.632 2.34 0.00 0.00 4.30
296 298 7.662897 TGGTTAAATTTATGGTCAAGTTGGAC 58.337 34.615 2.34 0.23 37.06 4.02
297 299 7.841282 TGGTTAAATTTATGGTCAAGTTGGA 57.159 32.000 2.34 0.00 0.00 3.53
298 300 7.115663 CGTTGGTTAAATTTATGGTCAAGTTGG 59.884 37.037 2.34 0.00 0.00 3.77
299 301 7.863375 TCGTTGGTTAAATTTATGGTCAAGTTG 59.137 33.333 0.00 0.00 0.00 3.16
300 302 7.942990 TCGTTGGTTAAATTTATGGTCAAGTT 58.057 30.769 0.00 0.00 0.00 2.66
301 303 7.446013 TCTCGTTGGTTAAATTTATGGTCAAGT 59.554 33.333 0.00 0.00 0.00 3.16
302 304 7.749126 GTCTCGTTGGTTAAATTTATGGTCAAG 59.251 37.037 0.00 0.00 0.00 3.02
303 305 7.308710 GGTCTCGTTGGTTAAATTTATGGTCAA 60.309 37.037 0.00 0.00 0.00 3.18
304 306 6.149807 GGTCTCGTTGGTTAAATTTATGGTCA 59.850 38.462 0.00 0.00 0.00 4.02
305 307 6.549061 GGTCTCGTTGGTTAAATTTATGGTC 58.451 40.000 0.00 0.00 0.00 4.02
306 308 5.122711 CGGTCTCGTTGGTTAAATTTATGGT 59.877 40.000 0.00 0.00 0.00 3.55
307 309 5.352016 TCGGTCTCGTTGGTTAAATTTATGG 59.648 40.000 0.00 0.00 37.69 2.74
308 310 6.091713 AGTCGGTCTCGTTGGTTAAATTTATG 59.908 38.462 0.00 0.00 37.69 1.90
309 311 6.091713 CAGTCGGTCTCGTTGGTTAAATTTAT 59.908 38.462 0.00 0.00 37.69 1.40
310 312 5.406175 CAGTCGGTCTCGTTGGTTAAATTTA 59.594 40.000 0.00 0.00 37.69 1.40
311 313 4.212636 CAGTCGGTCTCGTTGGTTAAATTT 59.787 41.667 0.00 0.00 37.69 1.82
312 314 3.744426 CAGTCGGTCTCGTTGGTTAAATT 59.256 43.478 0.00 0.00 37.69 1.82
313 315 3.323243 CAGTCGGTCTCGTTGGTTAAAT 58.677 45.455 0.00 0.00 37.69 1.40
314 316 2.746269 CAGTCGGTCTCGTTGGTTAAA 58.254 47.619 0.00 0.00 37.69 1.52
315 317 1.603678 GCAGTCGGTCTCGTTGGTTAA 60.604 52.381 0.00 0.00 37.69 2.01
316 318 0.038892 GCAGTCGGTCTCGTTGGTTA 60.039 55.000 0.00 0.00 37.69 2.85
317 319 1.300697 GCAGTCGGTCTCGTTGGTT 60.301 57.895 0.00 0.00 37.69 3.67
318 320 2.338984 GCAGTCGGTCTCGTTGGT 59.661 61.111 0.00 0.00 37.69 3.67
319 321 2.805353 CGCAGTCGGTCTCGTTGG 60.805 66.667 0.00 0.00 37.69 3.77
329 331 4.735132 TTTCTCCCGCCGCAGTCG 62.735 66.667 0.00 0.00 0.00 4.18
330 332 1.964373 TTTTTCTCCCGCCGCAGTC 60.964 57.895 0.00 0.00 0.00 3.51
331 333 2.112297 TTTTTCTCCCGCCGCAGT 59.888 55.556 0.00 0.00 0.00 4.40
372 374 9.621629 AAAGTTATACCGGTGAATTCATATTCA 57.378 29.630 19.93 0.00 45.99 2.57
375 377 8.349983 GCAAAAGTTATACCGGTGAATTCATAT 58.650 33.333 19.93 7.86 0.00 1.78
376 378 7.554835 AGCAAAAGTTATACCGGTGAATTCATA 59.445 33.333 19.93 2.37 0.00 2.15
377 379 6.377146 AGCAAAAGTTATACCGGTGAATTCAT 59.623 34.615 19.93 3.55 0.00 2.57
378 380 5.708230 AGCAAAAGTTATACCGGTGAATTCA 59.292 36.000 19.93 3.38 0.00 2.57
379 381 6.190954 AGCAAAAGTTATACCGGTGAATTC 57.809 37.500 19.93 0.00 0.00 2.17
380 382 5.124936 GGAGCAAAAGTTATACCGGTGAATT 59.875 40.000 19.93 5.24 0.00 2.17
381 383 4.638865 GGAGCAAAAGTTATACCGGTGAAT 59.361 41.667 19.93 6.16 0.00 2.57
382 384 4.004982 GGAGCAAAAGTTATACCGGTGAA 58.995 43.478 19.93 8.68 0.00 3.18
383 385 3.602483 GGAGCAAAAGTTATACCGGTGA 58.398 45.455 19.93 1.17 0.00 4.02
384 386 2.681344 GGGAGCAAAAGTTATACCGGTG 59.319 50.000 19.93 0.00 0.00 4.94
385 387 2.678769 CGGGAGCAAAAGTTATACCGGT 60.679 50.000 13.98 13.98 36.67 5.28
386 388 1.937899 CGGGAGCAAAAGTTATACCGG 59.062 52.381 0.00 0.00 36.67 5.28
408 410 2.805353 CCAACGAGACCGACTGCG 60.805 66.667 0.00 0.00 39.50 5.18
409 411 1.733399 GACCAACGAGACCGACTGC 60.733 63.158 0.00 0.00 39.50 4.40
410 412 0.031585 TTGACCAACGAGACCGACTG 59.968 55.000 0.00 0.00 39.50 3.51
411 413 0.748450 TTTGACCAACGAGACCGACT 59.252 50.000 0.00 0.00 39.50 4.18
412 414 1.792006 ATTTGACCAACGAGACCGAC 58.208 50.000 0.00 0.00 39.50 4.79
413 415 2.536761 AATTTGACCAACGAGACCGA 57.463 45.000 0.00 0.00 39.50 4.69
414 416 4.436852 CCATAAATTTGACCAACGAGACCG 60.437 45.833 0.00 0.00 42.50 4.79
415 417 4.457949 ACCATAAATTTGACCAACGAGACC 59.542 41.667 0.00 0.00 0.00 3.85
416 418 5.180492 TGACCATAAATTTGACCAACGAGAC 59.820 40.000 0.00 0.00 0.00 3.36
417 419 5.309638 TGACCATAAATTTGACCAACGAGA 58.690 37.500 0.00 0.00 0.00 4.04
418 420 5.621197 TGACCATAAATTTGACCAACGAG 57.379 39.130 0.00 0.00 0.00 4.18
419 421 6.039941 ACTTTGACCATAAATTTGACCAACGA 59.960 34.615 0.00 0.00 0.00 3.85
420 422 6.212955 ACTTTGACCATAAATTTGACCAACG 58.787 36.000 0.00 0.00 0.00 4.10
421 423 7.708752 TCAACTTTGACCATAAATTTGACCAAC 59.291 33.333 0.00 0.00 35.58 3.77
422 424 7.786030 TCAACTTTGACCATAAATTTGACCAA 58.214 30.769 0.00 0.00 35.58 3.67
423 425 7.353414 TCAACTTTGACCATAAATTTGACCA 57.647 32.000 0.00 0.00 35.58 4.02
424 426 7.170828 GGTTCAACTTTGACCATAAATTTGACC 59.829 37.037 0.00 0.00 38.27 4.02
425 427 7.708752 TGGTTCAACTTTGACCATAAATTTGAC 59.291 33.333 0.00 0.00 38.27 3.18
426 428 7.708752 GTGGTTCAACTTTGACCATAAATTTGA 59.291 33.333 13.12 0.00 39.11 2.69
427 429 7.306515 CGTGGTTCAACTTTGACCATAAATTTG 60.307 37.037 13.12 0.00 39.11 2.32
428 430 6.699642 CGTGGTTCAACTTTGACCATAAATTT 59.300 34.615 13.12 0.00 39.11 1.82
429 431 6.212955 CGTGGTTCAACTTTGACCATAAATT 58.787 36.000 13.12 0.00 39.11 1.82
430 432 5.278758 CCGTGGTTCAACTTTGACCATAAAT 60.279 40.000 13.12 0.00 39.11 1.40
431 433 4.036971 CCGTGGTTCAACTTTGACCATAAA 59.963 41.667 13.12 0.00 39.11 1.40
432 434 3.566322 CCGTGGTTCAACTTTGACCATAA 59.434 43.478 13.12 0.00 39.11 1.90
433 435 3.142951 CCGTGGTTCAACTTTGACCATA 58.857 45.455 13.12 0.00 39.11 2.74
434 436 1.953686 CCGTGGTTCAACTTTGACCAT 59.046 47.619 13.12 0.00 39.11 3.55
435 437 1.384525 CCGTGGTTCAACTTTGACCA 58.615 50.000 8.39 8.39 36.83 4.02
436 438 0.666374 CCCGTGGTTCAACTTTGACC 59.334 55.000 0.00 0.00 36.83 4.02
437 439 1.670791 TCCCGTGGTTCAACTTTGAC 58.329 50.000 0.00 0.00 36.83 3.18
438 440 2.421751 TTCCCGTGGTTCAACTTTGA 57.578 45.000 0.00 0.00 34.92 2.69
439 441 4.069304 TCTATTCCCGTGGTTCAACTTTG 58.931 43.478 0.00 0.00 0.00 2.77
440 442 4.360951 TCTATTCCCGTGGTTCAACTTT 57.639 40.909 0.00 0.00 0.00 2.66
441 443 4.019681 TCATCTATTCCCGTGGTTCAACTT 60.020 41.667 0.00 0.00 0.00 2.66
442 444 3.517901 TCATCTATTCCCGTGGTTCAACT 59.482 43.478 0.00 0.00 0.00 3.16
443 445 3.869065 TCATCTATTCCCGTGGTTCAAC 58.131 45.455 0.00 0.00 0.00 3.18
444 446 4.513442 CTTCATCTATTCCCGTGGTTCAA 58.487 43.478 0.00 0.00 0.00 2.69
445 447 3.681594 GCTTCATCTATTCCCGTGGTTCA 60.682 47.826 0.00 0.00 0.00 3.18
446 448 2.872858 GCTTCATCTATTCCCGTGGTTC 59.127 50.000 0.00 0.00 0.00 3.62
447 449 2.741878 CGCTTCATCTATTCCCGTGGTT 60.742 50.000 0.00 0.00 0.00 3.67
448 450 1.202533 CGCTTCATCTATTCCCGTGGT 60.203 52.381 0.00 0.00 0.00 4.16
449 451 1.502231 CGCTTCATCTATTCCCGTGG 58.498 55.000 0.00 0.00 0.00 4.94
450 452 0.861837 GCGCTTCATCTATTCCCGTG 59.138 55.000 0.00 0.00 0.00 4.94
451 453 0.753262 AGCGCTTCATCTATTCCCGT 59.247 50.000 2.64 0.00 0.00 5.28
452 454 2.724977 TAGCGCTTCATCTATTCCCG 57.275 50.000 18.68 0.00 0.00 5.14
453 455 7.334421 TCAAAATATAGCGCTTCATCTATTCCC 59.666 37.037 18.68 0.00 0.00 3.97
454 456 8.256611 TCAAAATATAGCGCTTCATCTATTCC 57.743 34.615 18.68 0.00 0.00 3.01
458 460 9.271828 TCATTTCAAAATATAGCGCTTCATCTA 57.728 29.630 18.68 0.00 0.00 1.98
459 461 8.158169 TCATTTCAAAATATAGCGCTTCATCT 57.842 30.769 18.68 0.00 0.00 2.90
460 462 8.786937 TTCATTTCAAAATATAGCGCTTCATC 57.213 30.769 18.68 0.00 0.00 2.92
461 463 7.864379 CCTTCATTTCAAAATATAGCGCTTCAT 59.136 33.333 18.68 6.56 0.00 2.57
462 464 7.195646 CCTTCATTTCAAAATATAGCGCTTCA 58.804 34.615 18.68 3.63 0.00 3.02
463 465 6.638468 CCCTTCATTTCAAAATATAGCGCTTC 59.362 38.462 18.68 0.00 0.00 3.86
464 466 6.321181 TCCCTTCATTTCAAAATATAGCGCTT 59.679 34.615 18.68 6.25 0.00 4.68
465 467 5.827797 TCCCTTCATTTCAAAATATAGCGCT 59.172 36.000 17.26 17.26 0.00 5.92
466 468 6.072112 TCCCTTCATTTCAAAATATAGCGC 57.928 37.500 0.00 0.00 0.00 5.92
467 469 7.264373 ACTCCCTTCATTTCAAAATATAGCG 57.736 36.000 0.00 0.00 0.00 4.26
468 470 9.343539 ACTACTCCCTTCATTTCAAAATATAGC 57.656 33.333 0.00 0.00 0.00 2.97
473 475 9.927081 ATCATACTACTCCCTTCATTTCAAAAT 57.073 29.630 0.00 0.00 0.00 1.82
478 480 9.360093 CGATTATCATACTACTCCCTTCATTTC 57.640 37.037 0.00 0.00 0.00 2.17
479 481 9.090103 TCGATTATCATACTACTCCCTTCATTT 57.910 33.333 0.00 0.00 0.00 2.32
480 482 8.651589 TCGATTATCATACTACTCCCTTCATT 57.348 34.615 0.00 0.00 0.00 2.57
481 483 8.524487 GTTCGATTATCATACTACTCCCTTCAT 58.476 37.037 0.00 0.00 0.00 2.57
482 484 7.504574 TGTTCGATTATCATACTACTCCCTTCA 59.495 37.037 0.00 0.00 0.00 3.02
483 485 7.883217 TGTTCGATTATCATACTACTCCCTTC 58.117 38.462 0.00 0.00 0.00 3.46
484 486 7.506261 ACTGTTCGATTATCATACTACTCCCTT 59.494 37.037 0.00 0.00 0.00 3.95
485 487 7.005296 ACTGTTCGATTATCATACTACTCCCT 58.995 38.462 0.00 0.00 0.00 4.20
486 488 7.216973 ACTGTTCGATTATCATACTACTCCC 57.783 40.000 0.00 0.00 0.00 4.30
540 542 3.771577 AGGATGGACCGTGATTTATCC 57.228 47.619 0.00 0.00 44.74 2.59
578 580 8.017418 TCCTTTAGTTCATGGATTGTTTTTGT 57.983 30.769 0.00 0.00 0.00 2.83
604 607 8.434392 AGTACTTACAAGGGTTATGTTCAGAAA 58.566 33.333 0.00 0.00 32.27 2.52
606 609 7.453752 AGAGTACTTACAAGGGTTATGTTCAGA 59.546 37.037 0.00 0.00 32.27 3.27
607 610 7.612677 AGAGTACTTACAAGGGTTATGTTCAG 58.387 38.462 0.00 0.00 32.27 3.02
608 611 7.453752 AGAGAGTACTTACAAGGGTTATGTTCA 59.546 37.037 0.00 0.00 32.27 3.18
610 613 7.093421 GGAGAGAGTACTTACAAGGGTTATGTT 60.093 40.741 0.00 0.00 32.27 2.71
612 615 6.380274 TGGAGAGAGTACTTACAAGGGTTATG 59.620 42.308 0.00 0.00 0.00 1.90
615 618 4.748701 TGGAGAGAGTACTTACAAGGGTT 58.251 43.478 0.00 0.00 0.00 4.11
616 619 4.399483 TGGAGAGAGTACTTACAAGGGT 57.601 45.455 0.00 0.00 0.00 4.34
617 620 7.342284 TCTTTATGGAGAGAGTACTTACAAGGG 59.658 40.741 0.00 0.00 0.00 3.95
618 621 8.294954 TCTTTATGGAGAGAGTACTTACAAGG 57.705 38.462 0.00 0.00 0.00 3.61
628 631 8.811994 GCTCCTATATTTCTTTATGGAGAGAGT 58.188 37.037 9.93 0.00 41.31 3.24
629 632 8.811017 TGCTCCTATATTTCTTTATGGAGAGAG 58.189 37.037 9.93 0.00 41.31 3.20
630 633 8.727100 TGCTCCTATATTTCTTTATGGAGAGA 57.273 34.615 9.93 0.00 41.31 3.10
631 634 9.956640 AATGCTCCTATATTTCTTTATGGAGAG 57.043 33.333 9.93 0.00 41.31 3.20
641 644 9.061435 GCACTTTCTAAATGCTCCTATATTTCT 57.939 33.333 0.00 0.00 36.40 2.52
642 645 8.840321 TGCACTTTCTAAATGCTCCTATATTTC 58.160 33.333 0.00 0.00 40.13 2.17
643 646 8.752005 TGCACTTTCTAAATGCTCCTATATTT 57.248 30.769 0.00 0.00 40.13 1.40
644 647 8.930846 ATGCACTTTCTAAATGCTCCTATATT 57.069 30.769 0.00 0.00 40.13 1.28
647 650 8.790718 CATTATGCACTTTCTAAATGCTCCTAT 58.209 33.333 0.00 0.00 40.13 2.57
648 651 7.992608 TCATTATGCACTTTCTAAATGCTCCTA 59.007 33.333 0.00 0.00 40.13 2.94
649 652 6.830324 TCATTATGCACTTTCTAAATGCTCCT 59.170 34.615 0.00 0.00 40.13 3.69
650 653 6.914757 GTCATTATGCACTTTCTAAATGCTCC 59.085 38.462 0.00 0.00 40.13 4.70
651 654 7.430502 GTGTCATTATGCACTTTCTAAATGCTC 59.569 37.037 10.79 0.00 40.13 4.26
652 655 7.121759 AGTGTCATTATGCACTTTCTAAATGCT 59.878 33.333 13.60 0.00 42.61 3.79
653 656 7.253422 AGTGTCATTATGCACTTTCTAAATGC 58.747 34.615 13.60 0.00 42.61 3.56
660 663 9.884465 GGATATTTAGTGTCATTATGCACTTTC 57.116 33.333 20.69 12.89 42.61 2.62
661 664 9.407380 TGGATATTTAGTGTCATTATGCACTTT 57.593 29.630 20.69 12.39 42.61 2.66
662 665 8.978874 TGGATATTTAGTGTCATTATGCACTT 57.021 30.769 20.69 10.57 42.61 3.16
663 666 8.978874 TTGGATATTTAGTGTCATTATGCACT 57.021 30.769 19.85 19.85 46.33 4.40
664 667 9.616634 CATTGGATATTTAGTGTCATTATGCAC 57.383 33.333 10.30 10.30 35.98 4.57
665 668 9.353431 ACATTGGATATTTAGTGTCATTATGCA 57.647 29.630 0.00 0.00 0.00 3.96
670 673 9.479549 AGGAAACATTGGATATTTAGTGTCATT 57.520 29.630 0.00 0.00 0.00 2.57
671 674 9.479549 AAGGAAACATTGGATATTTAGTGTCAT 57.520 29.630 0.00 0.00 0.00 3.06
672 675 8.877864 AAGGAAACATTGGATATTTAGTGTCA 57.122 30.769 0.00 0.00 0.00 3.58
673 676 8.122952 CGAAGGAAACATTGGATATTTAGTGTC 58.877 37.037 0.00 0.00 0.00 3.67
674 677 7.827236 TCGAAGGAAACATTGGATATTTAGTGT 59.173 33.333 0.00 0.00 0.00 3.55
675 678 8.208718 TCGAAGGAAACATTGGATATTTAGTG 57.791 34.615 0.00 0.00 0.00 2.74
676 679 8.801882 TTCGAAGGAAACATTGGATATTTAGT 57.198 30.769 0.00 0.00 0.00 2.24
679 682 8.748412 TCAATTCGAAGGAAACATTGGATATTT 58.252 29.630 3.35 0.00 35.40 1.40
680 683 8.292444 TCAATTCGAAGGAAACATTGGATATT 57.708 30.769 3.35 0.00 35.40 1.28
681 684 7.880160 TCAATTCGAAGGAAACATTGGATAT 57.120 32.000 3.35 0.00 35.40 1.63
682 685 7.880160 ATCAATTCGAAGGAAACATTGGATA 57.120 32.000 3.35 0.00 35.40 2.59
712 715 1.850441 CGTACTATTACTGTGCGCCAC 59.150 52.381 4.18 3.72 36.82 5.01
714 717 2.480224 TCGTACTATTACTGTGCGCC 57.520 50.000 4.18 0.00 41.81 6.53
777 780 3.241515 TTGTGCGATGGGTACGGCA 62.242 57.895 0.00 0.00 33.41 5.69
852 856 2.622942 TGCGCTTCTTGGATCTTTTTGT 59.377 40.909 9.73 0.00 0.00 2.83
854 858 2.887152 AGTGCGCTTCTTGGATCTTTTT 59.113 40.909 9.73 0.00 0.00 1.94
912 918 3.623531 TGGGATAGGAATGGGAATGGAT 58.376 45.455 0.00 0.00 0.00 3.41
927 933 1.293763 TCACTGGAGTGGGATGGGATA 59.706 52.381 6.94 0.00 45.65 2.59
928 934 0.044702 TCACTGGAGTGGGATGGGAT 59.955 55.000 6.94 0.00 45.65 3.85
929 935 1.473844 TCACTGGAGTGGGATGGGA 59.526 57.895 6.94 0.00 45.65 4.37
932 938 0.177604 GAGCTCACTGGAGTGGGATG 59.822 60.000 10.99 0.00 46.32 3.51
977 1005 3.129988 GGTTGCCTGTAGTACTGTATCGT 59.870 47.826 5.39 0.00 0.00 3.73
1334 1365 2.506061 CCTCCCCATCTGCTCCGAG 61.506 68.421 0.00 0.00 0.00 4.63
1360 1391 3.302347 CTTGACGGCGGCTTCTCCT 62.302 63.158 16.45 0.00 0.00 3.69
1516 1547 0.179062 CTTAGCGAGGCTGCTGGATT 60.179 55.000 17.85 0.00 46.70 3.01
1544 1575 3.192922 CGCGGAATGACGGGGTTC 61.193 66.667 0.00 0.00 42.24 3.62
1549 1580 2.278596 ATCGACGCGGAATGACGG 60.279 61.111 12.47 0.00 0.00 4.79
1551 1582 0.597637 ATGGATCGACGCGGAATGAC 60.598 55.000 12.47 0.00 0.00 3.06
1554 1585 4.655527 GATGGATCGACGCGGAAT 57.344 55.556 12.47 0.00 0.00 3.01
1609 1647 5.642686 GCAAGACAACTAGGAGTACTACTG 58.357 45.833 18.50 10.08 0.00 2.74
1616 1654 1.067495 GCTCGCAAGACAACTAGGAGT 60.067 52.381 0.00 0.00 45.01 3.85
1617 1655 1.203523 AGCTCGCAAGACAACTAGGAG 59.796 52.381 0.00 0.00 45.01 3.69
1618 1656 1.202582 GAGCTCGCAAGACAACTAGGA 59.797 52.381 0.00 0.00 45.01 2.94
1619 1657 1.203523 AGAGCTCGCAAGACAACTAGG 59.796 52.381 8.37 0.00 45.01 3.02
1620 1658 2.525055 GAGAGCTCGCAAGACAACTAG 58.475 52.381 13.06 0.00 45.01 2.57
1621 1659 1.202582 GGAGAGCTCGCAAGACAACTA 59.797 52.381 19.55 0.00 45.01 2.24
1622 1660 0.037790 GGAGAGCTCGCAAGACAACT 60.038 55.000 19.55 0.00 45.01 3.16
1623 1661 0.037790 AGGAGAGCTCGCAAGACAAC 60.038 55.000 19.55 0.00 45.01 3.32
1624 1662 0.037882 CAGGAGAGCTCGCAAGACAA 60.038 55.000 19.55 0.00 45.01 3.18
1625 1663 1.588597 CAGGAGAGCTCGCAAGACA 59.411 57.895 19.55 0.00 45.01 3.41
1626 1664 1.809209 GCAGGAGAGCTCGCAAGAC 60.809 63.158 19.55 1.52 45.01 3.01
1627 1665 1.981312 AGCAGGAGAGCTCGCAAGA 60.981 57.895 19.55 0.00 42.18 3.02
1628 1666 2.578128 AGCAGGAGAGCTCGCAAG 59.422 61.111 19.55 11.42 42.18 4.01
1640 1678 1.674962 GCAAGGCTAATTGAGAGCAGG 59.325 52.381 1.35 0.00 41.98 4.85
1648 1686 7.062605 CACAACAAGATTAAGCAAGGCTAATTG 59.937 37.037 0.00 0.00 38.25 2.32
1656 1694 5.095691 ACGACACAACAAGATTAAGCAAG 57.904 39.130 0.00 0.00 0.00 4.01
1664 1702 3.637998 ACTACGACGACACAACAAGAT 57.362 42.857 0.00 0.00 0.00 2.40
1665 1703 3.425577 AACTACGACGACACAACAAGA 57.574 42.857 0.00 0.00 0.00 3.02
1669 1707 3.111098 ACTCAAACTACGACGACACAAC 58.889 45.455 0.00 0.00 0.00 3.32
1670 1708 3.425577 ACTCAAACTACGACGACACAA 57.574 42.857 0.00 0.00 0.00 3.33
1672 1710 4.266029 TGAAAACTCAAACTACGACGACAC 59.734 41.667 0.00 0.00 0.00 3.67
1674 1712 4.605573 GCTGAAAACTCAAACTACGACGAC 60.606 45.833 0.00 0.00 0.00 4.34
1675 1713 3.488310 GCTGAAAACTCAAACTACGACGA 59.512 43.478 0.00 0.00 0.00 4.20
1676 1714 3.362693 GGCTGAAAACTCAAACTACGACG 60.363 47.826 0.00 0.00 0.00 5.12
1677 1715 3.558418 TGGCTGAAAACTCAAACTACGAC 59.442 43.478 0.00 0.00 0.00 4.34
1678 1716 3.799366 TGGCTGAAAACTCAAACTACGA 58.201 40.909 0.00 0.00 0.00 3.43
1679 1717 4.545823 TTGGCTGAAAACTCAAACTACG 57.454 40.909 0.00 0.00 0.00 3.51
1682 1720 5.506317 CGATCTTTGGCTGAAAACTCAAACT 60.506 40.000 0.00 0.00 0.00 2.66
1686 1732 3.738982 TCGATCTTTGGCTGAAAACTCA 58.261 40.909 0.00 0.00 0.00 3.41
1687 1733 3.425492 GCTCGATCTTTGGCTGAAAACTC 60.425 47.826 0.00 0.00 0.00 3.01
1693 1739 1.153568 CCGCTCGATCTTTGGCTGA 60.154 57.895 0.00 0.00 0.00 4.26
1698 1744 0.173481 TGACCTCCGCTCGATCTTTG 59.827 55.000 0.00 0.00 0.00 2.77
1699 1745 0.895530 TTGACCTCCGCTCGATCTTT 59.104 50.000 0.00 0.00 0.00 2.52
1708 1754 3.127533 AGCGCAATTGACCTCCGC 61.128 61.111 11.47 16.45 44.47 5.54
1709 1755 2.787249 CAGCGCAATTGACCTCCG 59.213 61.111 11.47 3.72 0.00 4.63
1716 1762 0.179192 ACACATACGCAGCGCAATTG 60.179 50.000 16.61 10.07 0.00 2.32
1717 1763 0.521291 AACACATACGCAGCGCAATT 59.479 45.000 16.61 0.00 0.00 2.32
1719 1765 1.224722 TGAACACATACGCAGCGCAA 61.225 50.000 16.61 3.30 0.00 4.85
1721 1767 1.059369 CTGAACACATACGCAGCGC 59.941 57.895 16.61 0.00 0.00 5.92
1730 1779 5.827797 ACCATTTACAGACAACTGAACACAT 59.172 36.000 0.00 0.00 46.03 3.21
1732 1781 5.065988 ACACCATTTACAGACAACTGAACAC 59.934 40.000 0.00 0.00 46.03 3.32
1736 1785 5.989168 CACTACACCATTTACAGACAACTGA 59.011 40.000 0.00 0.00 46.03 3.41
1740 1789 5.676552 ACACACTACACCATTTACAGACAA 58.323 37.500 0.00 0.00 0.00 3.18
1741 1790 5.284861 ACACACTACACCATTTACAGACA 57.715 39.130 0.00 0.00 0.00 3.41
1753 1802 6.811665 TCACTGCATCTTATTACACACTACAC 59.188 38.462 0.00 0.00 0.00 2.90
1780 1832 1.832883 TTGCACGGAATAGCCATTGT 58.167 45.000 0.00 0.00 35.94 2.71
1786 1838 2.939460 AACCATTTGCACGGAATAGC 57.061 45.000 3.07 0.00 0.00 2.97
1793 1847 0.031449 ACCGGAAAACCATTTGCACG 59.969 50.000 9.46 0.00 36.74 5.34
1824 1878 2.642139 AAATCACAGCGCCAAAGATG 57.358 45.000 2.29 0.00 0.00 2.90
1844 1898 9.283768 TCATGCTCTATCTTTCAAAGTTTAACA 57.716 29.630 0.00 0.00 0.00 2.41
1848 1902 8.632679 TGTTTCATGCTCTATCTTTCAAAGTTT 58.367 29.630 0.00 0.00 0.00 2.66
1852 1906 7.509141 TGTGTTTCATGCTCTATCTTTCAAA 57.491 32.000 0.00 0.00 0.00 2.69
1863 1917 3.840468 TGCATCATTGTGTTTCATGCTC 58.160 40.909 4.03 0.00 31.83 4.26
1864 1918 3.945981 TGCATCATTGTGTTTCATGCT 57.054 38.095 4.03 0.00 31.83 3.79
1872 1926 9.901172 ATCAGATATGTATATGCATCATTGTGT 57.099 29.630 9.78 0.00 0.00 3.72
1886 1940 7.971201 TCTGCTTTTCTCCATCAGATATGTAT 58.029 34.615 0.00 0.00 0.00 2.29
1889 1943 6.522946 TCTCTGCTTTTCTCCATCAGATATG 58.477 40.000 0.00 0.00 33.86 1.78
1892 1946 5.633655 ATCTCTGCTTTTCTCCATCAGAT 57.366 39.130 0.00 0.00 33.86 2.90
1902 1956 4.154717 GCGAAGTTGAATCTCTGCTTTTC 58.845 43.478 0.00 0.00 0.00 2.29
1903 1957 3.565482 TGCGAAGTTGAATCTCTGCTTTT 59.435 39.130 0.00 0.00 0.00 2.27
1913 1998 4.701651 TCATTCTGGATTGCGAAGTTGAAT 59.298 37.500 0.00 0.00 0.00 2.57
1918 2003 3.340814 AGTCATTCTGGATTGCGAAGT 57.659 42.857 0.00 0.00 0.00 3.01
1920 2005 5.122239 CAGTTTAGTCATTCTGGATTGCGAA 59.878 40.000 0.00 0.00 0.00 4.70
1934 2019 6.014584 TCTCAAATAGCAGTCCAGTTTAGTCA 60.015 38.462 0.00 0.00 0.00 3.41
1945 2030 9.810545 AGTTAGTTCTTATCTCAAATAGCAGTC 57.189 33.333 0.00 0.00 0.00 3.51
1963 2048 6.346678 CCGAGAGCAAACTGTTTAGTTAGTTC 60.347 42.308 5.31 1.40 46.14 3.01
2003 2099 8.626526 GGTTTTACTCCATAAAAAGTCTGAACA 58.373 33.333 0.00 0.00 42.94 3.18
2004 2100 8.847196 AGGTTTTACTCCATAAAAAGTCTGAAC 58.153 33.333 0.00 0.00 42.94 3.18
2006 2102 7.996644 ACAGGTTTTACTCCATAAAAAGTCTGA 59.003 33.333 16.51 0.00 42.94 3.27
2007 2103 8.166422 ACAGGTTTTACTCCATAAAAAGTCTG 57.834 34.615 12.11 12.11 42.94 3.51
2009 2105 9.059260 TGTACAGGTTTTACTCCATAAAAAGTC 57.941 33.333 0.00 0.00 42.94 3.01
2018 2114 4.409574 TCCAAGTGTACAGGTTTTACTCCA 59.590 41.667 0.00 0.00 0.00 3.86
2019 2115 4.964593 TCCAAGTGTACAGGTTTTACTCC 58.035 43.478 0.00 0.00 0.00 3.85
2032 2129 3.314693 ACCCACTCTTCTTCCAAGTGTA 58.685 45.455 0.00 0.00 38.97 2.90
2045 2142 0.838122 AGCAGCTTGGTACCCACTCT 60.838 55.000 10.07 0.00 30.78 3.24
2055 2152 3.487042 CGAAGATTGATTCAGCAGCTTGG 60.487 47.826 0.00 0.00 0.00 3.61
2058 2155 1.669779 GCGAAGATTGATTCAGCAGCT 59.330 47.619 0.00 0.00 32.62 4.24
2065 2162 7.658179 TGGAATGTATAGCGAAGATTGATTC 57.342 36.000 0.00 0.00 0.00 2.52
2066 2163 8.627208 AATGGAATGTATAGCGAAGATTGATT 57.373 30.769 0.00 0.00 0.00 2.57
2077 2178 6.656693 ACATAGCAGGAAATGGAATGTATAGC 59.343 38.462 0.00 0.00 0.00 2.97
2117 2218 1.821061 CTGACCGAGGGAAGCTGTGT 61.821 60.000 0.00 0.00 0.00 3.72
2146 2247 1.104630 GACTGACCGAGGGAAGGTAG 58.895 60.000 0.00 0.00 43.01 3.18
2151 2254 3.244318 GGTAAAAAGACTGACCGAGGGAA 60.244 47.826 0.00 0.00 0.00 3.97
2152 2255 2.301009 GGTAAAAAGACTGACCGAGGGA 59.699 50.000 0.00 0.00 0.00 4.20
2155 2260 5.805994 GTGATAGGTAAAAAGACTGACCGAG 59.194 44.000 0.00 0.00 37.04 4.63
2157 2262 5.475719 TGTGATAGGTAAAAAGACTGACCG 58.524 41.667 0.00 0.00 37.04 4.79
2166 2271 5.497474 GAGGGAAGCTGTGATAGGTAAAAA 58.503 41.667 0.00 0.00 35.72 1.94
2218 2323 1.069022 CAGCATTTTGGTCCACAGACG 60.069 52.381 0.00 0.00 44.54 4.18
2236 2341 2.093288 TCCATCTTGTAGCTTCCAGCAG 60.093 50.000 0.00 0.00 45.56 4.24
2239 2344 2.420687 GGGTCCATCTTGTAGCTTCCAG 60.421 54.545 0.00 0.00 0.00 3.86
2241 2346 1.559682 TGGGTCCATCTTGTAGCTTCC 59.440 52.381 0.00 0.00 0.00 3.46
2274 2379 9.981114 TCACGATAGATGTTTTATGATGTACAT 57.019 29.630 8.43 8.43 40.53 2.29
2275 2380 9.463443 CTCACGATAGATGTTTTATGATGTACA 57.537 33.333 0.00 0.00 41.38 2.90
2278 2391 7.500992 ACCTCACGATAGATGTTTTATGATGT 58.499 34.615 0.00 0.00 41.38 3.06
2303 2416 8.759481 AATACACAGAAGAGATGATCTAGTGA 57.241 34.615 14.18 3.94 37.23 3.41
2304 2417 9.247126 CAAATACACAGAAGAGATGATCTAGTG 57.753 37.037 0.00 2.84 37.23 2.74
2311 2424 5.997129 TGTTGCAAATACACAGAAGAGATGA 59.003 36.000 0.00 0.00 0.00 2.92
2327 2440 6.634805 TCACTTGGAAAATTAGTGTTGCAAA 58.365 32.000 0.00 0.00 40.08 3.68
2345 2458 7.856145 AACTTCTCCTATATTGCTTCACTTG 57.144 36.000 0.00 0.00 0.00 3.16
2387 2502 8.946085 CACTGAACCTGAGTAAAATATTTAGCA 58.054 33.333 0.01 0.00 0.00 3.49
2408 2523 7.280876 GGATTTATCTTTGACACATAGCACTGA 59.719 37.037 0.00 0.00 0.00 3.41
2418 2533 9.050601 CCTAGATTCTGGATTTATCTTTGACAC 57.949 37.037 0.00 0.00 31.46 3.67
2438 2553 3.498774 AATGCAATTCTCGCCCTAGAT 57.501 42.857 0.00 0.00 0.00 1.98
2448 2563 3.510360 AGCTGAAGCAGAAATGCAATTCT 59.490 39.130 11.34 11.34 45.16 2.40
2449 2564 3.846360 AGCTGAAGCAGAAATGCAATTC 58.154 40.909 6.38 6.38 45.16 2.17
2450 2565 3.955650 AGCTGAAGCAGAAATGCAATT 57.044 38.095 4.90 0.00 45.16 2.32
2451 2566 3.368116 GGAAGCTGAAGCAGAAATGCAAT 60.368 43.478 4.90 0.00 45.16 3.56
2452 2567 2.029649 GGAAGCTGAAGCAGAAATGCAA 60.030 45.455 4.90 0.00 45.16 4.08
2453 2568 1.542915 GGAAGCTGAAGCAGAAATGCA 59.457 47.619 4.90 0.00 45.16 3.96
2454 2569 1.135170 GGGAAGCTGAAGCAGAAATGC 60.135 52.381 4.90 0.00 45.16 3.56
2455 2570 1.475682 GGGGAAGCTGAAGCAGAAATG 59.524 52.381 4.90 0.00 45.16 2.32
2456 2571 1.844687 GGGGAAGCTGAAGCAGAAAT 58.155 50.000 4.90 0.00 45.16 2.17
2457 2572 0.606401 CGGGGAAGCTGAAGCAGAAA 60.606 55.000 4.90 0.00 45.16 2.52
2458 2573 1.003355 CGGGGAAGCTGAAGCAGAA 60.003 57.895 4.90 0.00 45.16 3.02
2459 2574 2.665000 CGGGGAAGCTGAAGCAGA 59.335 61.111 4.90 0.00 45.16 4.26
2460 2575 2.437359 CCGGGGAAGCTGAAGCAG 60.437 66.667 4.90 0.00 45.16 4.24
2461 2576 2.351924 AAACCGGGGAAGCTGAAGCA 62.352 55.000 6.32 0.00 45.16 3.91
2462 2577 0.322187 TAAACCGGGGAAGCTGAAGC 60.322 55.000 6.32 0.00 42.49 3.86
2463 2578 1.003233 ACTAAACCGGGGAAGCTGAAG 59.997 52.381 6.32 0.00 0.00 3.02
2464 2579 1.061546 ACTAAACCGGGGAAGCTGAA 58.938 50.000 6.32 0.00 0.00 3.02
2465 2580 1.061546 AACTAAACCGGGGAAGCTGA 58.938 50.000 6.32 0.00 0.00 4.26
2466 2581 1.165270 CAACTAAACCGGGGAAGCTG 58.835 55.000 6.32 0.00 0.00 4.24
2467 2582 0.037734 CCAACTAAACCGGGGAAGCT 59.962 55.000 6.32 0.00 0.00 3.74
2468 2583 0.251033 ACCAACTAAACCGGGGAAGC 60.251 55.000 6.32 0.00 0.00 3.86
2469 2584 2.281539 AACCAACTAAACCGGGGAAG 57.718 50.000 6.32 1.47 0.00 3.46
2470 2585 2.308690 CAAACCAACTAAACCGGGGAA 58.691 47.619 6.32 0.00 0.00 3.97
2471 2586 1.479021 CCAAACCAACTAAACCGGGGA 60.479 52.381 6.32 0.00 0.00 4.81
2472 2587 0.963225 CCAAACCAACTAAACCGGGG 59.037 55.000 6.32 0.00 0.00 5.73
2473 2588 1.883926 CTCCAAACCAACTAAACCGGG 59.116 52.381 6.32 0.00 0.00 5.73
2474 2589 1.883926 CCTCCAAACCAACTAAACCGG 59.116 52.381 0.00 0.00 0.00 5.28
2475 2590 1.268625 GCCTCCAAACCAACTAAACCG 59.731 52.381 0.00 0.00 0.00 4.44
2476 2591 1.268625 CGCCTCCAAACCAACTAAACC 59.731 52.381 0.00 0.00 0.00 3.27
2477 2592 1.268625 CCGCCTCCAAACCAACTAAAC 59.731 52.381 0.00 0.00 0.00 2.01
2478 2593 1.133730 ACCGCCTCCAAACCAACTAAA 60.134 47.619 0.00 0.00 0.00 1.85
2479 2594 0.475044 ACCGCCTCCAAACCAACTAA 59.525 50.000 0.00 0.00 0.00 2.24
2480 2595 0.475044 AACCGCCTCCAAACCAACTA 59.525 50.000 0.00 0.00 0.00 2.24
2481 2596 0.475044 TAACCGCCTCCAAACCAACT 59.525 50.000 0.00 0.00 0.00 3.16
2482 2597 1.320507 TTAACCGCCTCCAAACCAAC 58.679 50.000 0.00 0.00 0.00 3.77
2483 2598 2.164338 GATTAACCGCCTCCAAACCAA 58.836 47.619 0.00 0.00 0.00 3.67
2484 2599 1.353022 AGATTAACCGCCTCCAAACCA 59.647 47.619 0.00 0.00 0.00 3.67
2485 2600 1.743394 CAGATTAACCGCCTCCAAACC 59.257 52.381 0.00 0.00 0.00 3.27
2486 2601 1.743394 CCAGATTAACCGCCTCCAAAC 59.257 52.381 0.00 0.00 0.00 2.93
2487 2602 1.953311 GCCAGATTAACCGCCTCCAAA 60.953 52.381 0.00 0.00 0.00 3.28
2488 2603 0.393808 GCCAGATTAACCGCCTCCAA 60.394 55.000 0.00 0.00 0.00 3.53
2489 2604 1.223487 GCCAGATTAACCGCCTCCA 59.777 57.895 0.00 0.00 0.00 3.86
2490 2605 0.756903 TAGCCAGATTAACCGCCTCC 59.243 55.000 0.00 0.00 0.00 4.30
2491 2606 2.300437 AGATAGCCAGATTAACCGCCTC 59.700 50.000 0.00 0.00 0.00 4.70
2492 2607 2.330216 AGATAGCCAGATTAACCGCCT 58.670 47.619 0.00 0.00 0.00 5.52
2493 2608 2.841442 AGATAGCCAGATTAACCGCC 57.159 50.000 0.00 0.00 0.00 6.13
2494 2609 5.758784 AGTAAAAGATAGCCAGATTAACCGC 59.241 40.000 0.00 0.00 0.00 5.68
2495 2610 6.424207 GGAGTAAAAGATAGCCAGATTAACCG 59.576 42.308 0.00 0.00 0.00 4.44
2496 2611 6.711194 GGGAGTAAAAGATAGCCAGATTAACC 59.289 42.308 0.00 0.00 0.00 2.85
2497 2612 7.510407 AGGGAGTAAAAGATAGCCAGATTAAC 58.490 38.462 0.00 0.00 0.00 2.01
2498 2613 7.471539 CGAGGGAGTAAAAGATAGCCAGATTAA 60.472 40.741 0.00 0.00 0.00 1.40
2499 2614 6.015350 CGAGGGAGTAAAAGATAGCCAGATTA 60.015 42.308 0.00 0.00 0.00 1.75
2500 2615 5.221541 CGAGGGAGTAAAAGATAGCCAGATT 60.222 44.000 0.00 0.00 0.00 2.40
2501 2616 4.282195 CGAGGGAGTAAAAGATAGCCAGAT 59.718 45.833 0.00 0.00 0.00 2.90
2502 2617 3.637229 CGAGGGAGTAAAAGATAGCCAGA 59.363 47.826 0.00 0.00 0.00 3.86
2503 2618 3.243907 CCGAGGGAGTAAAAGATAGCCAG 60.244 52.174 0.00 0.00 0.00 4.85
2504 2619 2.698797 CCGAGGGAGTAAAAGATAGCCA 59.301 50.000 0.00 0.00 0.00 4.75
2505 2620 2.699321 ACCGAGGGAGTAAAAGATAGCC 59.301 50.000 0.00 0.00 0.00 3.93
2506 2621 3.243805 GGACCGAGGGAGTAAAAGATAGC 60.244 52.174 0.00 0.00 0.00 2.97
2507 2622 3.321396 GGGACCGAGGGAGTAAAAGATAG 59.679 52.174 0.00 0.00 0.00 2.08
2508 2623 3.303049 GGGACCGAGGGAGTAAAAGATA 58.697 50.000 0.00 0.00 0.00 1.98
2509 2624 2.117051 GGGACCGAGGGAGTAAAAGAT 58.883 52.381 0.00 0.00 0.00 2.40
2510 2625 1.203212 TGGGACCGAGGGAGTAAAAGA 60.203 52.381 0.00 0.00 0.00 2.52
2511 2626 1.272807 TGGGACCGAGGGAGTAAAAG 58.727 55.000 0.00 0.00 0.00 2.27
2512 2627 1.961133 ATGGGACCGAGGGAGTAAAA 58.039 50.000 0.00 0.00 0.00 1.52
2513 2628 2.852714 TATGGGACCGAGGGAGTAAA 57.147 50.000 0.00 0.00 0.00 2.01
2514 2629 2.852714 TTATGGGACCGAGGGAGTAA 57.147 50.000 0.00 0.00 0.00 2.24
2516 2631 3.970426 ATTATGGGACCGAGGGAGT 57.030 52.632 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.