Multiple sequence alignment - TraesCS3D01G367400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G367400 chr3D 100.000 3275 0 0 1622 4896 481511438 481508164 0.000000e+00 6048.0
1 TraesCS3D01G367400 chr3D 100.000 1269 0 0 1 1269 481513059 481511791 0.000000e+00 2344.0
2 TraesCS3D01G367400 chr3D 93.519 108 4 2 792 897 604374630 604374736 1.820000e-34 158.0
3 TraesCS3D01G367400 chr3B 93.881 1863 76 10 1624 3479 642481364 642479533 0.000000e+00 2774.0
4 TraesCS3D01G367400 chr3B 92.442 688 44 6 3465 4145 642479517 642478831 0.000000e+00 976.0
5 TraesCS3D01G367400 chr3B 94.864 623 19 7 656 1269 642482037 642481419 0.000000e+00 961.0
6 TraesCS3D01G367400 chr3B 90.683 483 21 7 246 714 642482494 642482022 5.380000e-174 621.0
7 TraesCS3D01G367400 chr3B 95.671 231 10 0 1 231 642482706 642482476 5.990000e-99 372.0
8 TraesCS3D01G367400 chr3B 86.598 194 22 3 4705 4896 642477843 642478034 1.380000e-50 211.0
9 TraesCS3D01G367400 chr3B 97.895 95 1 1 796 889 811423167 811423261 3.920000e-36 163.0
10 TraesCS3D01G367400 chr3A 89.470 1415 80 26 1624 3014 624447647 624446278 0.000000e+00 1724.0
11 TraesCS3D01G367400 chr3A 89.438 1193 86 20 3016 4188 624446218 624445046 0.000000e+00 1469.0
12 TraesCS3D01G367400 chr3A 94.048 504 23 5 766 1269 624448198 624447702 0.000000e+00 758.0
13 TraesCS3D01G367400 chr3A 87.919 298 32 1 4350 4643 624445052 624444755 1.010000e-91 348.0
14 TraesCS3D01G367400 chr3A 85.859 297 34 6 1 291 624449016 624448722 4.760000e-80 309.0
15 TraesCS3D01G367400 chr3A 79.769 346 32 21 377 689 624448688 624448348 2.970000e-52 217.0
16 TraesCS3D01G367400 chr3A 96.939 98 3 0 792 889 734018546 734018643 1.090000e-36 165.0
17 TraesCS3D01G367400 chr3A 93.458 107 6 1 791 897 734015037 734015142 1.820000e-34 158.0
18 TraesCS3D01G367400 chr7B 83.662 355 37 13 2450 2791 651880485 651880139 1.020000e-81 315.0
19 TraesCS3D01G367400 chr7B 86.486 185 16 6 2013 2192 651884138 651883958 1.390000e-45 195.0
20 TraesCS3D01G367400 chr4D 92.398 171 12 1 4184 4354 93336683 93336852 4.900000e-60 243.0
21 TraesCS3D01G367400 chr4D 88.000 200 19 4 4167 4361 40557365 40557166 1.060000e-56 231.0
22 TraesCS3D01G367400 chr4D 90.751 173 14 2 4178 4349 243613443 243613272 3.810000e-56 230.0
23 TraesCS3D01G367400 chr4D 91.304 69 6 0 4632 4700 442889145 442889213 1.450000e-15 95.3
24 TraesCS3D01G367400 chr5D 89.119 193 20 1 4168 4360 415988384 415988193 6.330000e-59 239.0
25 TraesCS3D01G367400 chr1A 91.813 171 13 1 4184 4353 284146822 284146652 2.280000e-58 237.0
26 TraesCS3D01G367400 chr1A 90.805 174 15 1 4182 4354 325392472 325392645 1.060000e-56 231.0
27 TraesCS3D01G367400 chr1A 96.907 97 3 0 792 888 33020366 33020462 3.920000e-36 163.0
28 TraesCS3D01G367400 chr6D 92.169 166 13 0 4184 4349 109240317 109240482 8.190000e-58 235.0
29 TraesCS3D01G367400 chr6D 98.246 57 1 0 4644 4700 12586392 12586336 3.120000e-17 100.0
30 TraesCS3D01G367400 chr5A 91.716 169 13 1 4185 4353 355466018 355466185 2.950000e-57 233.0
31 TraesCS3D01G367400 chr1D 90.751 173 15 1 4181 4353 9218376 9218205 3.810000e-56 230.0
32 TraesCS3D01G367400 chr1D 97.895 95 1 1 792 885 371655213 371655307 3.920000e-36 163.0
33 TraesCS3D01G367400 chr2D 75.901 444 73 16 7 440 379097487 379097068 3.870000e-46 196.0
34 TraesCS3D01G367400 chr2D 98.246 57 1 0 4644 4700 470525960 470525904 3.120000e-17 100.0
35 TraesCS3D01G367400 chr1B 96.907 97 2 1 792 887 496092209 496092305 1.410000e-35 161.0
36 TraesCS3D01G367400 chr7D 98.246 57 1 0 4644 4700 137853307 137853251 3.120000e-17 100.0
37 TraesCS3D01G367400 chr7D 96.491 57 2 0 4644 4700 180989095 180989039 1.450000e-15 95.3
38 TraesCS3D01G367400 chr7D 93.443 61 4 0 4640 4700 2569203 2569263 1.880000e-14 91.6
39 TraesCS3D01G367400 chr5B 98.246 57 1 0 4644 4700 661256720 661256776 3.120000e-17 100.0
40 TraesCS3D01G367400 chr5B 98.246 57 1 0 4644 4700 661271950 661272006 3.120000e-17 100.0
41 TraesCS3D01G367400 chrUn 96.491 57 2 0 4644 4700 104862641 104862585 1.450000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G367400 chr3D 481508164 481513059 4895 True 4196.000000 6048 100.0000 1 4896 2 chr3D.!!$R1 4895
1 TraesCS3D01G367400 chr3B 642478831 642482706 3875 True 1140.800000 2774 93.5082 1 4145 5 chr3B.!!$R1 4144
2 TraesCS3D01G367400 chr3A 624444755 624449016 4261 True 804.166667 1724 87.7505 1 4643 6 chr3A.!!$R1 4642
3 TraesCS3D01G367400 chr7B 651880139 651884138 3999 True 255.000000 315 85.0740 2013 2791 2 chr7B.!!$R1 778

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
237 238 0.108138 ATGTGGAGCCTACGCAACTC 60.108 55.0 0.00 0.0 37.52 3.01 F
581 642 0.179018 ATTTCTATCAGCCGGCCCAC 60.179 55.0 26.15 0.0 0.00 4.61 F
1885 2065 0.107897 ATATGTCGAGTGCGGCCAAA 60.108 50.0 2.24 0.0 42.58 3.28 F
2324 2514 0.912486 AGCATCCCAGTACAACCTCC 59.088 55.0 0.00 0.0 0.00 4.30 F
3246 6848 0.886563 GCAGAGCTGACATTTTGGCT 59.113 50.0 0.85 0.0 37.77 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1677 1851 0.168788 AAATGCCGAGCACATTGACG 59.831 50.000 0.50 0.0 43.04 4.35 R
1927 2107 0.894184 AGTGACCCACGACGACATCT 60.894 55.000 0.00 0.0 39.64 2.90 R
2975 6490 1.298340 CATGTACACCCTTCCGGCA 59.702 57.895 0.00 0.0 33.26 5.69 R
3310 6912 1.705186 ACCCACCTGATAGCAAACAGT 59.295 47.619 0.00 0.0 32.93 3.55 R
4480 8126 0.031449 GGCCAAACAAGCTGCGTTTA 59.969 50.000 12.72 0.0 34.87 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 1.533731 CCTTCGGCGTGTGTATTTTGT 59.466 47.619 6.85 0.00 0.00 2.83
106 107 2.600790 TGTCCTTGTTCGAGGTTCCTA 58.399 47.619 6.06 0.00 38.04 2.94
202 203 1.078143 GTTCAGGCGGCCATCTCTT 60.078 57.895 23.09 0.00 0.00 2.85
217 218 0.813210 CTCTTGCCCGATCAGCCTTC 60.813 60.000 2.49 0.00 0.00 3.46
231 232 0.811616 GCCTTCATGTGGAGCCTACG 60.812 60.000 10.79 0.00 0.00 3.51
233 234 0.108186 CTTCATGTGGAGCCTACGCA 60.108 55.000 0.00 0.00 37.52 5.24
234 235 0.323302 TTCATGTGGAGCCTACGCAA 59.677 50.000 0.00 0.00 37.52 4.85
235 236 0.391130 TCATGTGGAGCCTACGCAAC 60.391 55.000 0.00 0.00 37.52 4.17
236 237 0.391661 CATGTGGAGCCTACGCAACT 60.392 55.000 0.00 0.00 37.52 3.16
237 238 0.108138 ATGTGGAGCCTACGCAACTC 60.108 55.000 0.00 0.00 37.52 3.01
240 241 4.187056 GAGCCTACGCAACTCCAC 57.813 61.111 0.00 0.00 37.52 4.02
241 242 1.448013 GAGCCTACGCAACTCCACC 60.448 63.158 0.00 0.00 37.52 4.61
242 243 1.889530 GAGCCTACGCAACTCCACCT 61.890 60.000 0.00 0.00 37.52 4.00
243 244 1.448013 GCCTACGCAACTCCACCTC 60.448 63.158 0.00 0.00 34.03 3.85
244 245 1.218316 CCTACGCAACTCCACCTCC 59.782 63.158 0.00 0.00 0.00 4.30
245 246 1.153823 CTACGCAACTCCACCTCCG 60.154 63.158 0.00 0.00 0.00 4.63
246 247 3.291101 TACGCAACTCCACCTCCGC 62.291 63.158 0.00 0.00 0.00 5.54
248 249 4.021925 GCAACTCCACCTCCGCCT 62.022 66.667 0.00 0.00 0.00 5.52
249 250 2.750350 CAACTCCACCTCCGCCTT 59.250 61.111 0.00 0.00 0.00 4.35
250 251 1.980052 CAACTCCACCTCCGCCTTA 59.020 57.895 0.00 0.00 0.00 2.69
251 252 0.323629 CAACTCCACCTCCGCCTTAA 59.676 55.000 0.00 0.00 0.00 1.85
252 253 1.065418 CAACTCCACCTCCGCCTTAAT 60.065 52.381 0.00 0.00 0.00 1.40
253 254 1.286248 ACTCCACCTCCGCCTTAATT 58.714 50.000 0.00 0.00 0.00 1.40
254 255 1.633945 ACTCCACCTCCGCCTTAATTT 59.366 47.619 0.00 0.00 0.00 1.82
255 256 2.841881 ACTCCACCTCCGCCTTAATTTA 59.158 45.455 0.00 0.00 0.00 1.40
256 257 3.118371 ACTCCACCTCCGCCTTAATTTAG 60.118 47.826 0.00 0.00 0.00 1.85
257 258 3.109151 TCCACCTCCGCCTTAATTTAGA 58.891 45.455 0.00 0.00 0.00 2.10
258 259 3.134081 TCCACCTCCGCCTTAATTTAGAG 59.866 47.826 0.00 0.00 0.00 2.43
259 260 2.872858 CACCTCCGCCTTAATTTAGAGC 59.127 50.000 0.00 0.00 0.00 4.09
260 261 2.504175 ACCTCCGCCTTAATTTAGAGCA 59.496 45.455 0.00 0.00 0.00 4.26
261 262 3.136626 ACCTCCGCCTTAATTTAGAGCAT 59.863 43.478 0.00 0.00 0.00 3.79
262 263 3.748568 CCTCCGCCTTAATTTAGAGCATC 59.251 47.826 0.00 0.00 0.00 3.91
280 281 4.961730 AGCATCTTCTCCTCAATGTCTAGT 59.038 41.667 0.00 0.00 0.00 2.57
284 285 7.499292 CATCTTCTCCTCAATGTCTAGTTGAT 58.501 38.462 0.00 0.00 35.26 2.57
310 311 0.984961 TGCTCTCTTGCATAGCCCCT 60.985 55.000 7.99 0.00 38.12 4.79
313 314 2.834549 GCTCTCTTGCATAGCCCCTATA 59.165 50.000 0.00 0.00 0.00 1.31
367 368 6.357367 TCCATCTCTAACTTTTATTGCCTCC 58.643 40.000 0.00 0.00 0.00 4.30
368 369 6.158695 TCCATCTCTAACTTTTATTGCCTCCT 59.841 38.462 0.00 0.00 0.00 3.69
409 432 0.250234 TGCCCTCTTCAACTCATCGG 59.750 55.000 0.00 0.00 0.00 4.18
578 639 1.002544 AGCTATTTCTATCAGCCGGCC 59.997 52.381 26.15 5.07 35.88 6.13
579 640 1.946283 GCTATTTCTATCAGCCGGCCC 60.946 57.143 26.15 0.00 0.00 5.80
580 641 1.347707 CTATTTCTATCAGCCGGCCCA 59.652 52.381 26.15 10.76 0.00 5.36
581 642 0.179018 ATTTCTATCAGCCGGCCCAC 60.179 55.000 26.15 0.00 0.00 4.61
655 813 5.037383 TGATACTCCTAGACACATCGACT 57.963 43.478 0.00 0.00 0.00 4.18
713 871 0.615331 AGATGTGCGGTTGTCCATCT 59.385 50.000 0.00 0.00 39.27 2.90
743 901 8.560124 AGTTTCTTCATAGATATTGGAGGACT 57.440 34.615 0.00 0.00 0.00 3.85
779 943 8.895737 CCTCGTTAGGTTTAATAAATTAGCCAA 58.104 33.333 0.00 0.00 38.19 4.52
793 957 5.593679 ATTAGCCAACTCAGTACGTACAT 57.406 39.130 26.55 9.84 0.00 2.29
845 1009 1.123928 AGATTTAGGCTCTGGTCCGG 58.876 55.000 0.00 0.00 0.00 5.14
909 1082 7.581213 TTTTCCTGTTTTCAGCTCATCTTTA 57.419 32.000 0.00 0.00 45.76 1.85
1677 1851 5.007724 GGTATCCATTGAACGTTGGAGAATC 59.992 44.000 5.00 0.00 44.87 2.52
1688 1862 2.744202 GTTGGAGAATCGTCAATGTGCT 59.256 45.455 0.00 0.00 34.37 4.40
1707 1881 2.872245 GCTCGGCATTTTACATAGCTCA 59.128 45.455 0.00 0.00 0.00 4.26
1781 1961 4.146271 GTGATTTGTATGCGTGTGTGTTTG 59.854 41.667 0.00 0.00 0.00 2.93
1782 1962 3.766676 TTTGTATGCGTGTGTGTTTGT 57.233 38.095 0.00 0.00 0.00 2.83
1783 1963 2.746623 TGTATGCGTGTGTGTTTGTG 57.253 45.000 0.00 0.00 0.00 3.33
1784 1964 2.010497 TGTATGCGTGTGTGTTTGTGT 58.990 42.857 0.00 0.00 0.00 3.72
1785 1965 2.420372 TGTATGCGTGTGTGTTTGTGTT 59.580 40.909 0.00 0.00 0.00 3.32
1786 1966 2.645730 ATGCGTGTGTGTTTGTGTTT 57.354 40.000 0.00 0.00 0.00 2.83
1879 2059 1.422388 CCCATGATATGTCGAGTGCG 58.578 55.000 0.00 0.00 39.35 5.34
1885 2065 0.107897 ATATGTCGAGTGCGGCCAAA 60.108 50.000 2.24 0.00 42.58 3.28
2261 2451 9.586435 CAAGAATCATGTAGTTCACTATGTGTA 57.414 33.333 0.00 0.00 34.79 2.90
2303 2493 9.258826 CTTTGAGATGTGTAAGAGATCCTAATG 57.741 37.037 0.00 0.00 0.00 1.90
2324 2514 0.912486 AGCATCCCAGTACAACCTCC 59.088 55.000 0.00 0.00 0.00 4.30
2369 2559 6.867816 TGTTGTGAGAATGACAATTTATTGCC 59.132 34.615 2.46 0.00 45.62 4.52
2477 5964 6.486993 GTCAAGGGGATAAAGAATGTGTATCC 59.513 42.308 0.00 0.00 36.77 2.59
2543 6031 3.769844 TGATTCTGTCCCTGGAGAAGTAC 59.230 47.826 0.00 0.00 31.83 2.73
2785 6296 5.703592 ACTTGACCAAACATTAATGTAGCGA 59.296 36.000 21.07 8.22 40.80 4.93
2890 6405 6.317789 TGGAATGACAGAACAAGAAATGAC 57.682 37.500 0.00 0.00 0.00 3.06
2943 6458 8.107095 AGTATGTATTCCAAAACCAGTACATGT 58.893 33.333 2.69 2.69 35.24 3.21
2975 6490 4.469945 AGGCTATAGTGTGTGTAACCATGT 59.530 41.667 0.84 0.00 34.36 3.21
3014 6587 8.712285 ACATGGAATCAAAATTTTGCTAGATG 57.288 30.769 23.36 20.23 38.05 2.90
3019 6592 7.222224 GGAATCAAAATTTTGCTAGATGCTCAG 59.778 37.037 23.36 0.00 43.37 3.35
3108 6681 6.073711 GCTCAGGGCGAGTAATTTTTAGTATC 60.074 42.308 0.00 0.00 44.33 2.24
3111 6684 6.202954 CAGGGCGAGTAATTTTTAGTATCCAG 59.797 42.308 0.00 0.00 0.00 3.86
3117 6690 8.979574 CGAGTAATTTTTAGTATCCAGACATCC 58.020 37.037 0.00 0.00 0.00 3.51
3235 6837 1.025647 GCCTTGAAGGAGCAGAGCTG 61.026 60.000 16.93 0.00 39.88 4.24
3246 6848 0.886563 GCAGAGCTGACATTTTGGCT 59.113 50.000 0.85 0.00 37.77 4.75
3258 6860 7.523293 TGACATTTTGGCTCTTTCAAGATAA 57.477 32.000 0.00 0.00 33.93 1.75
3469 7071 9.436957 ACAGACATGTTTAATTCTTACAGGTAG 57.563 33.333 0.00 4.73 36.99 3.18
3473 7075 9.243105 ACATGTTTAATTCTTACAGGTAGCAAT 57.757 29.630 0.00 0.00 35.34 3.56
3487 7089 7.820648 ACAGGTAGCAATCAGTTTATCTTTTG 58.179 34.615 0.00 0.00 0.00 2.44
3489 7091 6.036470 GGTAGCAATCAGTTTATCTTTTGCC 58.964 40.000 0.00 0.00 40.58 4.52
3516 7150 6.174720 ACAACACTTCCTCTTGTCTGATTA 57.825 37.500 0.00 0.00 0.00 1.75
3519 7153 7.173907 ACAACACTTCCTCTTGTCTGATTATTG 59.826 37.037 0.00 0.00 0.00 1.90
3520 7154 5.645497 ACACTTCCTCTTGTCTGATTATTGC 59.355 40.000 0.00 0.00 0.00 3.56
3521 7155 5.065731 CACTTCCTCTTGTCTGATTATTGCC 59.934 44.000 0.00 0.00 0.00 4.52
3542 7176 3.947834 CCCTGTGTTGGTATCTTCAATCC 59.052 47.826 0.00 0.00 0.00 3.01
3548 7182 4.402155 TGTTGGTATCTTCAATCCATTGGC 59.598 41.667 0.00 0.00 38.30 4.52
3550 7184 3.214328 GGTATCTTCAATCCATTGGCGT 58.786 45.455 0.00 0.00 38.30 5.68
3556 7190 4.161565 TCTTCAATCCATTGGCGTACTAGT 59.838 41.667 0.00 0.00 38.30 2.57
3561 7195 2.563620 TCCATTGGCGTACTAGTTGTCA 59.436 45.455 0.00 0.00 0.00 3.58
3746 7382 1.962807 CTGAGGATGTCCAGAGGCTAG 59.037 57.143 1.30 0.00 38.89 3.42
3771 7407 0.391395 CTGTCAAGGAGAGGCAGCAG 60.391 60.000 0.00 0.00 0.00 4.24
3802 7438 1.282930 GGAAAGTGTCGCTCCACGTC 61.283 60.000 0.00 0.68 44.19 4.34
3829 7465 2.034999 TCCGGCCATTGGGTTCAC 59.965 61.111 2.24 0.00 36.17 3.18
4091 7733 6.543831 GGATGCTTCATGGAAGTAATGTAGTT 59.456 38.462 7.71 0.00 41.27 2.24
4103 7745 7.064728 GGAAGTAATGTAGTTTGCTCTGGTAAG 59.935 40.741 0.00 0.00 0.00 2.34
4147 7789 1.759445 AGCCGATGAGCTTACTGACAT 59.241 47.619 0.00 0.00 41.41 3.06
4151 7793 5.243954 AGCCGATGAGCTTACTGACATAATA 59.756 40.000 0.00 0.00 41.41 0.98
4153 7795 6.447162 CCGATGAGCTTACTGACATAATACA 58.553 40.000 0.00 0.00 0.00 2.29
4154 7796 7.093354 CCGATGAGCTTACTGACATAATACAT 58.907 38.462 0.00 0.00 0.00 2.29
4155 7797 7.062722 CCGATGAGCTTACTGACATAATACATG 59.937 40.741 0.00 0.00 0.00 3.21
4185 7827 6.264518 TCAGCGTTCTCTTGTGATACCATATA 59.735 38.462 0.00 0.00 0.00 0.86
4186 7828 6.363626 CAGCGTTCTCTTGTGATACCATATAC 59.636 42.308 0.00 0.00 0.00 1.47
4187 7829 6.265649 AGCGTTCTCTTGTGATACCATATACT 59.734 38.462 0.00 0.00 0.00 2.12
4188 7830 6.583050 GCGTTCTCTTGTGATACCATATACTC 59.417 42.308 0.00 0.00 0.00 2.59
4189 7831 7.085116 CGTTCTCTTGTGATACCATATACTCC 58.915 42.308 0.00 0.00 0.00 3.85
4190 7832 7.379750 GTTCTCTTGTGATACCATATACTCCC 58.620 42.308 0.00 0.00 0.00 4.30
4191 7833 6.864421 TCTCTTGTGATACCATATACTCCCT 58.136 40.000 0.00 0.00 0.00 4.20
4192 7834 6.948886 TCTCTTGTGATACCATATACTCCCTC 59.051 42.308 0.00 0.00 0.00 4.30
4193 7835 6.017192 TCTTGTGATACCATATACTCCCTCC 58.983 44.000 0.00 0.00 0.00 4.30
4194 7836 4.341487 TGTGATACCATATACTCCCTCCG 58.659 47.826 0.00 0.00 0.00 4.63
4195 7837 4.202641 TGTGATACCATATACTCCCTCCGT 60.203 45.833 0.00 0.00 0.00 4.69
4196 7838 4.771054 GTGATACCATATACTCCCTCCGTT 59.229 45.833 0.00 0.00 0.00 4.44
4197 7839 5.014858 TGATACCATATACTCCCTCCGTTC 58.985 45.833 0.00 0.00 0.00 3.95
4198 7840 2.606378 ACCATATACTCCCTCCGTTCC 58.394 52.381 0.00 0.00 0.00 3.62
4199 7841 1.900486 CCATATACTCCCTCCGTTCCC 59.100 57.143 0.00 0.00 0.00 3.97
4200 7842 2.605257 CATATACTCCCTCCGTTCCCA 58.395 52.381 0.00 0.00 0.00 4.37
4201 7843 2.852714 TATACTCCCTCCGTTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
4202 7844 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
4203 7845 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
4204 7846 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4205 7847 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
4206 7848 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
4207 7849 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
4208 7850 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
4209 7851 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
4210 7852 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
4211 7853 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
4212 7854 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
4213 7855 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
4214 7856 6.260271 CCTCCGTTCCCAAATATAAGTCTTTC 59.740 42.308 0.00 0.00 0.00 2.62
4215 7857 6.954232 TCCGTTCCCAAATATAAGTCTTTCT 58.046 36.000 0.00 0.00 0.00 2.52
4216 7858 8.081517 TCCGTTCCCAAATATAAGTCTTTCTA 57.918 34.615 0.00 0.00 0.00 2.10
4217 7859 8.202137 TCCGTTCCCAAATATAAGTCTTTCTAG 58.798 37.037 0.00 0.00 0.00 2.43
4218 7860 8.202137 CCGTTCCCAAATATAAGTCTTTCTAGA 58.798 37.037 0.00 0.00 0.00 2.43
4219 7861 9.595823 CGTTCCCAAATATAAGTCTTTCTAGAA 57.404 33.333 0.00 0.00 30.65 2.10
4231 7873 8.753497 AAGTCTTTCTAGAAATTCCAACAAGT 57.247 30.769 18.02 0.00 30.65 3.16
4232 7874 8.159344 AGTCTTTCTAGAAATTCCAACAAGTG 57.841 34.615 18.02 2.79 30.65 3.16
4233 7875 7.993183 AGTCTTTCTAGAAATTCCAACAAGTGA 59.007 33.333 18.02 5.04 30.65 3.41
4234 7876 8.070769 GTCTTTCTAGAAATTCCAACAAGTGAC 58.929 37.037 18.02 12.64 30.65 3.67
4235 7877 7.993183 TCTTTCTAGAAATTCCAACAAGTGACT 59.007 33.333 18.02 0.00 0.00 3.41
4236 7878 9.273016 CTTTCTAGAAATTCCAACAAGTGACTA 57.727 33.333 18.02 0.00 0.00 2.59
4237 7879 9.793259 TTTCTAGAAATTCCAACAAGTGACTAT 57.207 29.630 13.99 0.00 0.00 2.12
4242 7884 9.314321 AGAAATTCCAACAAGTGACTATATACG 57.686 33.333 0.00 0.00 0.00 3.06
4243 7885 8.433421 AAATTCCAACAAGTGACTATATACGG 57.567 34.615 0.00 0.00 0.00 4.02
4244 7886 6.778834 TTCCAACAAGTGACTATATACGGA 57.221 37.500 0.00 0.00 0.00 4.69
4245 7887 6.387041 TCCAACAAGTGACTATATACGGAG 57.613 41.667 0.00 0.00 0.00 4.63
4246 7888 4.982916 CCAACAAGTGACTATATACGGAGC 59.017 45.833 0.00 0.00 0.00 4.70
4247 7889 5.451381 CCAACAAGTGACTATATACGGAGCA 60.451 44.000 0.00 0.00 0.00 4.26
4248 7890 5.847111 ACAAGTGACTATATACGGAGCAA 57.153 39.130 0.00 0.00 0.00 3.91
4249 7891 6.216801 ACAAGTGACTATATACGGAGCAAA 57.783 37.500 0.00 0.00 0.00 3.68
4250 7892 6.636705 ACAAGTGACTATATACGGAGCAAAA 58.363 36.000 0.00 0.00 0.00 2.44
4251 7893 7.272978 ACAAGTGACTATATACGGAGCAAAAT 58.727 34.615 0.00 0.00 0.00 1.82
4252 7894 7.224753 ACAAGTGACTATATACGGAGCAAAATG 59.775 37.037 0.00 0.00 0.00 2.32
4253 7895 7.050970 AGTGACTATATACGGAGCAAAATGA 57.949 36.000 0.00 0.00 0.00 2.57
4254 7896 7.148641 AGTGACTATATACGGAGCAAAATGAG 58.851 38.462 0.00 0.00 0.00 2.90
4255 7897 6.924060 GTGACTATATACGGAGCAAAATGAGT 59.076 38.462 0.00 0.00 0.00 3.41
4256 7898 6.923508 TGACTATATACGGAGCAAAATGAGTG 59.076 38.462 0.00 0.00 0.00 3.51
4257 7899 7.050970 ACTATATACGGAGCAAAATGAGTGA 57.949 36.000 0.00 0.00 0.00 3.41
4258 7900 7.497595 ACTATATACGGAGCAAAATGAGTGAA 58.502 34.615 0.00 0.00 0.00 3.18
4259 7901 8.150945 ACTATATACGGAGCAAAATGAGTGAAT 58.849 33.333 0.00 0.00 0.00 2.57
4260 7902 5.741388 ATACGGAGCAAAATGAGTGAATC 57.259 39.130 0.00 0.00 0.00 2.52
4261 7903 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
4262 7904 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
4263 7905 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
4264 7906 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
4265 7907 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
4301 7943 9.511272 TGTCTATATACATCCGTATGTTGTAGT 57.489 33.333 0.00 0.00 44.07 2.73
4307 7949 8.958119 ATACATCCGTATGTTGTAGTTCATTT 57.042 30.769 0.00 0.00 44.07 2.32
4308 7950 7.072177 ACATCCGTATGTTGTAGTTCATTTG 57.928 36.000 0.00 0.00 44.07 2.32
4309 7951 5.539582 TCCGTATGTTGTAGTTCATTTGC 57.460 39.130 0.00 0.00 0.00 3.68
4310 7952 4.998033 TCCGTATGTTGTAGTTCATTTGCA 59.002 37.500 0.00 0.00 0.00 4.08
4311 7953 5.470437 TCCGTATGTTGTAGTTCATTTGCAA 59.530 36.000 0.00 0.00 0.00 4.08
4312 7954 6.150307 TCCGTATGTTGTAGTTCATTTGCAAT 59.850 34.615 0.00 0.00 0.00 3.56
4313 7955 6.806249 CCGTATGTTGTAGTTCATTTGCAATT 59.194 34.615 0.00 0.00 0.00 2.32
4314 7956 7.328249 CCGTATGTTGTAGTTCATTTGCAATTT 59.672 33.333 0.00 0.00 0.00 1.82
4315 7957 8.698854 CGTATGTTGTAGTTCATTTGCAATTTT 58.301 29.630 0.00 0.00 0.00 1.82
4345 7987 9.862149 AAAAACTTAGATTTAGAAACTGAGGGA 57.138 29.630 0.00 0.00 0.00 4.20
4346 7988 9.508642 AAAACTTAGATTTAGAAACTGAGGGAG 57.491 33.333 0.00 0.00 0.00 4.30
4347 7989 7.800300 ACTTAGATTTAGAAACTGAGGGAGT 57.200 36.000 0.00 0.00 35.94 3.85
4348 7990 8.896722 ACTTAGATTTAGAAACTGAGGGAGTA 57.103 34.615 0.00 0.00 33.09 2.59
4349 7991 9.322769 ACTTAGATTTAGAAACTGAGGGAGTAA 57.677 33.333 0.00 0.00 33.09 2.24
4365 8007 6.940739 AGGGAGTAATATGCTAGCATTGTAG 58.059 40.000 33.74 0.00 37.82 2.74
4366 8008 6.498651 AGGGAGTAATATGCTAGCATTGTAGT 59.501 38.462 33.74 25.48 37.82 2.73
4372 8014 4.655762 ATGCTAGCATTGTAGTCTTCGA 57.344 40.909 24.67 0.00 31.82 3.71
4376 8018 3.252974 AGCATTGTAGTCTTCGAAGGG 57.747 47.619 24.37 1.31 0.00 3.95
4415 8061 3.061848 ATGCCCGGGTTTCTTGCG 61.062 61.111 24.63 0.00 0.00 4.85
4445 8091 1.102978 CCAACAATTTAGGGAGGCGG 58.897 55.000 0.00 0.00 0.00 6.13
4456 8102 1.376609 GGGAGGCGGTTGTATGCTTG 61.377 60.000 0.00 0.00 0.00 4.01
4467 8113 3.737559 TGTATGCTTGTTCCCCTTCAT 57.262 42.857 0.00 0.00 0.00 2.57
4471 8117 4.524802 ATGCTTGTTCCCCTTCATCATA 57.475 40.909 0.00 0.00 0.00 2.15
4474 8120 4.016444 GCTTGTTCCCCTTCATCATACAA 58.984 43.478 0.00 0.00 0.00 2.41
4475 8121 4.646492 GCTTGTTCCCCTTCATCATACAAT 59.354 41.667 0.00 0.00 0.00 2.71
4478 8124 7.308830 GCTTGTTCCCCTTCATCATACAATATC 60.309 40.741 0.00 0.00 0.00 1.63
4480 8126 7.815383 TGTTCCCCTTCATCATACAATATCTT 58.185 34.615 0.00 0.00 0.00 2.40
4508 8154 0.680618 CTTGTTTGGCCTTCCATGCA 59.319 50.000 3.32 0.00 43.05 3.96
4511 8157 0.681175 GTTTGGCCTTCCATGCACTT 59.319 50.000 3.32 0.00 43.05 3.16
4512 8158 0.680618 TTTGGCCTTCCATGCACTTG 59.319 50.000 3.32 0.00 43.05 3.16
4516 8162 0.038892 GCCTTCCATGCACTTGTGTG 60.039 55.000 0.00 0.00 46.37 3.82
4560 8206 6.126796 TGCCATTTGTATGACCTCTATCAAGA 60.127 38.462 0.00 0.00 33.37 3.02
4582 8228 2.794350 GCTTTGTAGTGTTTGCGCATTT 59.206 40.909 12.75 0.00 0.00 2.32
4583 8229 3.361917 GCTTTGTAGTGTTTGCGCATTTG 60.362 43.478 12.75 0.00 0.00 2.32
4598 8244 2.718731 TTGTGGGCGACAAAAGCG 59.281 55.556 12.88 0.00 41.80 4.68
4609 8255 1.669760 CAAAAGCGTAGGTCGGCCA 60.670 57.895 9.71 0.00 37.06 5.36
4611 8257 1.232621 AAAAGCGTAGGTCGGCCAAC 61.233 55.000 9.71 0.00 37.06 3.77
4612 8258 3.927163 AAGCGTAGGTCGGCCAACG 62.927 63.158 9.71 5.36 46.11 4.10
4622 8268 2.355009 GGCCAACGCTGCTTGTTG 60.355 61.111 11.84 11.84 44.86 3.33
4627 8273 1.152963 AACGCTGCTTGTTGGAGGT 60.153 52.632 0.00 0.00 34.46 3.85
4628 8274 0.751643 AACGCTGCTTGTTGGAGGTT 60.752 50.000 0.00 0.00 34.46 3.50
4639 8285 1.360393 TTGGAGGTTGTTGAGCCCCT 61.360 55.000 0.00 0.00 0.00 4.79
4643 8289 1.607467 GGTTGTTGAGCCCCTGCAT 60.607 57.895 0.00 0.00 41.13 3.96
4644 8290 0.323360 GGTTGTTGAGCCCCTGCATA 60.323 55.000 0.00 0.00 41.13 3.14
4645 8291 0.811281 GTTGTTGAGCCCCTGCATAC 59.189 55.000 0.00 0.00 41.13 2.39
4646 8292 0.323360 TTGTTGAGCCCCTGCATACC 60.323 55.000 0.00 0.00 41.13 2.73
4647 8293 1.819632 GTTGAGCCCCTGCATACCG 60.820 63.158 0.00 0.00 41.13 4.02
4648 8294 1.992834 TTGAGCCCCTGCATACCGA 60.993 57.895 0.00 0.00 41.13 4.69
4649 8295 1.558167 TTGAGCCCCTGCATACCGAA 61.558 55.000 0.00 0.00 41.13 4.30
4650 8296 1.223487 GAGCCCCTGCATACCGAAA 59.777 57.895 0.00 0.00 41.13 3.46
4651 8297 0.393808 GAGCCCCTGCATACCGAAAA 60.394 55.000 0.00 0.00 41.13 2.29
4652 8298 0.039035 AGCCCCTGCATACCGAAAAA 59.961 50.000 0.00 0.00 41.13 1.94
4653 8299 0.455815 GCCCCTGCATACCGAAAAAG 59.544 55.000 0.00 0.00 37.47 2.27
4654 8300 1.102978 CCCCTGCATACCGAAAAAGG 58.897 55.000 0.00 0.00 37.30 3.11
4655 8301 0.455815 CCCTGCATACCGAAAAAGGC 59.544 55.000 0.00 0.00 33.69 4.35
4656 8302 1.463674 CCTGCATACCGAAAAAGGCT 58.536 50.000 0.00 0.00 33.69 4.58
4657 8303 1.818674 CCTGCATACCGAAAAAGGCTT 59.181 47.619 0.00 0.00 33.69 4.35
4658 8304 2.231235 CCTGCATACCGAAAAAGGCTTT 59.769 45.455 6.68 6.68 33.69 3.51
4659 8305 3.501950 CTGCATACCGAAAAAGGCTTTC 58.498 45.455 13.76 0.41 33.69 2.62
4661 8307 2.515912 CATACCGAAAAAGGCTTTCGC 58.484 47.619 13.76 7.41 46.89 4.70
4671 8317 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
4672 8318 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
4673 8319 1.235724 GCTTTCGCCCCGCTTTATAT 58.764 50.000 0.00 0.00 0.00 0.86
4674 8320 2.419667 GCTTTCGCCCCGCTTTATATA 58.580 47.619 0.00 0.00 0.00 0.86
4675 8321 3.007635 GCTTTCGCCCCGCTTTATATAT 58.992 45.455 0.00 0.00 0.00 0.86
4676 8322 4.186159 GCTTTCGCCCCGCTTTATATATA 58.814 43.478 0.00 0.00 0.00 0.86
4677 8323 4.632688 GCTTTCGCCCCGCTTTATATATAA 59.367 41.667 0.81 0.81 0.00 0.98
4678 8324 5.122711 GCTTTCGCCCCGCTTTATATATAAA 59.877 40.000 15.47 15.47 0.00 1.40
4698 8344 7.759489 ATAAAGCATCAACCAGAAGTACAAA 57.241 32.000 0.00 0.00 0.00 2.83
4699 8345 6.655078 AAAGCATCAACCAGAAGTACAAAT 57.345 33.333 0.00 0.00 0.00 2.32
4700 8346 6.655078 AAGCATCAACCAGAAGTACAAATT 57.345 33.333 0.00 0.00 0.00 1.82
4701 8347 6.259550 AGCATCAACCAGAAGTACAAATTC 57.740 37.500 0.00 0.00 0.00 2.17
4702 8348 6.006449 AGCATCAACCAGAAGTACAAATTCT 58.994 36.000 0.00 0.00 37.49 2.40
4703 8349 7.168219 AGCATCAACCAGAAGTACAAATTCTA 58.832 34.615 0.00 0.00 35.26 2.10
4704 8350 7.119846 AGCATCAACCAGAAGTACAAATTCTAC 59.880 37.037 0.00 0.00 35.26 2.59
4705 8351 7.094805 GCATCAACCAGAAGTACAAATTCTACA 60.095 37.037 0.00 0.00 35.26 2.74
4706 8352 8.783093 CATCAACCAGAAGTACAAATTCTACAA 58.217 33.333 0.00 0.00 35.26 2.41
4707 8353 8.740123 TCAACCAGAAGTACAAATTCTACAAA 57.260 30.769 0.00 0.00 35.26 2.83
4708 8354 9.349713 TCAACCAGAAGTACAAATTCTACAAAT 57.650 29.630 0.00 0.00 35.26 2.32
4709 8355 9.965824 CAACCAGAAGTACAAATTCTACAAATT 57.034 29.630 0.00 0.00 35.26 1.82
4710 8356 9.965824 AACCAGAAGTACAAATTCTACAAATTG 57.034 29.630 0.00 0.00 35.26 2.32
4711 8357 9.131791 ACCAGAAGTACAAATTCTACAAATTGT 57.868 29.630 3.43 3.43 39.23 2.71
4723 8369 3.788227 ACAAATTGTAGGTCAGGAGCA 57.212 42.857 0.00 0.00 0.00 4.26
4724 8370 3.412386 ACAAATTGTAGGTCAGGAGCAC 58.588 45.455 0.00 0.00 0.00 4.40
4725 8371 2.749621 CAAATTGTAGGTCAGGAGCACC 59.250 50.000 0.97 0.00 0.00 5.01
4726 8372 1.656587 ATTGTAGGTCAGGAGCACCA 58.343 50.000 2.07 0.00 36.23 4.17
4727 8373 1.429930 TTGTAGGTCAGGAGCACCAA 58.570 50.000 2.07 0.78 36.23 3.67
4728 8374 1.429930 TGTAGGTCAGGAGCACCAAA 58.570 50.000 2.07 0.00 36.23 3.28
4729 8375 1.985159 TGTAGGTCAGGAGCACCAAAT 59.015 47.619 2.07 0.00 36.23 2.32
4730 8376 3.178046 TGTAGGTCAGGAGCACCAAATA 58.822 45.455 2.07 0.00 36.23 1.40
4731 8377 3.780294 TGTAGGTCAGGAGCACCAAATAT 59.220 43.478 2.07 0.00 36.23 1.28
4732 8378 4.966168 TGTAGGTCAGGAGCACCAAATATA 59.034 41.667 2.07 0.00 36.23 0.86
4733 8379 5.606749 TGTAGGTCAGGAGCACCAAATATAT 59.393 40.000 2.07 0.00 36.23 0.86
4734 8380 5.653255 AGGTCAGGAGCACCAAATATATT 57.347 39.130 2.07 0.00 36.23 1.28
4735 8381 6.018433 AGGTCAGGAGCACCAAATATATTT 57.982 37.500 4.81 4.81 36.23 1.40
4736 8382 5.829924 AGGTCAGGAGCACCAAATATATTTG 59.170 40.000 25.20 25.20 45.04 2.32
4737 8383 5.594317 GGTCAGGAGCACCAAATATATTTGT 59.406 40.000 28.10 17.54 44.21 2.83
4738 8384 6.096846 GGTCAGGAGCACCAAATATATTTGTT 59.903 38.462 28.10 17.34 44.21 2.83
4739 8385 7.363793 GGTCAGGAGCACCAAATATATTTGTTT 60.364 37.037 28.10 16.69 44.21 2.83
4740 8386 8.682710 GTCAGGAGCACCAAATATATTTGTTTA 58.317 33.333 28.10 7.93 44.21 2.01
4741 8387 8.902806 TCAGGAGCACCAAATATATTTGTTTAG 58.097 33.333 28.10 18.67 44.21 1.85
4742 8388 8.686334 CAGGAGCACCAAATATATTTGTTTAGT 58.314 33.333 28.10 19.18 44.21 2.24
4743 8389 9.914834 AGGAGCACCAAATATATTTGTTTAGTA 57.085 29.630 28.10 0.00 44.21 1.82
4756 8402 7.823149 ATTTGTTTAGTAATCTTAGCGTCGT 57.177 32.000 0.00 0.00 0.00 4.34
4757 8403 7.642071 TTTGTTTAGTAATCTTAGCGTCGTT 57.358 32.000 0.00 0.00 0.00 3.85
4758 8404 6.621737 TGTTTAGTAATCTTAGCGTCGTTG 57.378 37.500 0.00 0.00 0.00 4.10
4759 8405 6.380995 TGTTTAGTAATCTTAGCGTCGTTGA 58.619 36.000 0.00 0.00 0.00 3.18
4760 8406 7.031372 TGTTTAGTAATCTTAGCGTCGTTGAT 58.969 34.615 0.00 0.00 0.00 2.57
4761 8407 7.008901 TGTTTAGTAATCTTAGCGTCGTTGATG 59.991 37.037 0.00 0.00 0.00 3.07
4762 8408 5.244785 AGTAATCTTAGCGTCGTTGATGA 57.755 39.130 0.00 0.00 0.00 2.92
4763 8409 5.274718 AGTAATCTTAGCGTCGTTGATGAG 58.725 41.667 0.00 0.00 0.00 2.90
4764 8410 2.561733 TCTTAGCGTCGTTGATGAGG 57.438 50.000 0.00 0.00 0.00 3.86
4767 8413 2.434185 GCGTCGTTGATGAGGCCA 60.434 61.111 5.01 0.00 42.37 5.36
4768 8414 1.815421 GCGTCGTTGATGAGGCCAT 60.815 57.895 5.01 0.00 42.37 4.40
4769 8415 0.529773 GCGTCGTTGATGAGGCCATA 60.530 55.000 5.01 0.00 42.37 2.74
4770 8416 1.873903 GCGTCGTTGATGAGGCCATAT 60.874 52.381 5.01 0.00 42.37 1.78
4771 8417 2.609491 GCGTCGTTGATGAGGCCATATA 60.609 50.000 5.01 0.00 42.37 0.86
4772 8418 3.245797 CGTCGTTGATGAGGCCATATAG 58.754 50.000 5.01 0.00 32.09 1.31
4773 8419 3.305403 CGTCGTTGATGAGGCCATATAGT 60.305 47.826 5.01 0.00 32.09 2.12
4774 8420 4.632153 GTCGTTGATGAGGCCATATAGTT 58.368 43.478 5.01 0.00 32.09 2.24
4775 8421 4.449068 GTCGTTGATGAGGCCATATAGTTG 59.551 45.833 5.01 0.00 32.09 3.16
4776 8422 4.343814 TCGTTGATGAGGCCATATAGTTGA 59.656 41.667 5.01 0.00 32.09 3.18
4777 8423 5.012046 TCGTTGATGAGGCCATATAGTTGAT 59.988 40.000 5.01 0.00 32.09 2.57
4778 8424 5.121298 CGTTGATGAGGCCATATAGTTGATG 59.879 44.000 5.01 0.00 32.09 3.07
4779 8425 6.233434 GTTGATGAGGCCATATAGTTGATGA 58.767 40.000 5.01 0.00 32.09 2.92
4780 8426 6.631763 TGATGAGGCCATATAGTTGATGAT 57.368 37.500 5.01 0.00 32.09 2.45
4781 8427 7.024345 TGATGAGGCCATATAGTTGATGATT 57.976 36.000 5.01 0.00 32.09 2.57
4782 8428 6.882678 TGATGAGGCCATATAGTTGATGATTG 59.117 38.462 5.01 0.00 32.09 2.67
4783 8429 5.563592 TGAGGCCATATAGTTGATGATTGG 58.436 41.667 5.01 0.00 0.00 3.16
4784 8430 4.927049 AGGCCATATAGTTGATGATTGGG 58.073 43.478 5.01 0.00 0.00 4.12
4785 8431 4.019174 GGCCATATAGTTGATGATTGGGG 58.981 47.826 0.00 0.00 0.00 4.96
4786 8432 4.263905 GGCCATATAGTTGATGATTGGGGA 60.264 45.833 0.00 0.00 0.00 4.81
4787 8433 5.324409 GCCATATAGTTGATGATTGGGGAA 58.676 41.667 0.00 0.00 0.00 3.97
4788 8434 5.183904 GCCATATAGTTGATGATTGGGGAAC 59.816 44.000 0.00 0.00 0.00 3.62
4789 8435 6.546484 CCATATAGTTGATGATTGGGGAACT 58.454 40.000 0.00 0.00 0.00 3.01
4790 8436 7.689299 CCATATAGTTGATGATTGGGGAACTA 58.311 38.462 0.00 0.00 34.51 2.24
4791 8437 8.163408 CCATATAGTTGATGATTGGGGAACTAA 58.837 37.037 0.00 0.00 33.90 2.24
4792 8438 9.573166 CATATAGTTGATGATTGGGGAACTAAA 57.427 33.333 0.00 0.00 33.90 1.85
4793 8439 9.799106 ATATAGTTGATGATTGGGGAACTAAAG 57.201 33.333 0.00 0.00 33.90 1.85
4794 8440 6.139679 AGTTGATGATTGGGGAACTAAAGA 57.860 37.500 0.00 0.00 33.13 2.52
4795 8441 6.552008 AGTTGATGATTGGGGAACTAAAGAA 58.448 36.000 0.00 0.00 33.13 2.52
4796 8442 6.434340 AGTTGATGATTGGGGAACTAAAGAAC 59.566 38.462 0.00 0.00 33.13 3.01
4797 8443 6.139679 TGATGATTGGGGAACTAAAGAACT 57.860 37.500 0.00 0.00 33.13 3.01
4798 8444 6.552008 TGATGATTGGGGAACTAAAGAACTT 58.448 36.000 0.00 0.00 33.13 2.66
4799 8445 6.434028 TGATGATTGGGGAACTAAAGAACTTG 59.566 38.462 0.00 0.00 33.13 3.16
4800 8446 5.076873 TGATTGGGGAACTAAAGAACTTGG 58.923 41.667 0.00 0.00 33.13 3.61
4801 8447 4.799715 TTGGGGAACTAAAGAACTTGGA 57.200 40.909 0.00 0.00 0.00 3.53
4802 8448 4.094830 TGGGGAACTAAAGAACTTGGAC 57.905 45.455 0.00 0.00 0.00 4.02
4803 8449 3.181437 TGGGGAACTAAAGAACTTGGACC 60.181 47.826 0.00 0.00 0.00 4.46
4804 8450 3.181437 GGGGAACTAAAGAACTTGGACCA 60.181 47.826 0.00 0.00 0.00 4.02
4805 8451 4.508584 GGGGAACTAAAGAACTTGGACCAT 60.509 45.833 0.00 0.00 0.00 3.55
4806 8452 5.077564 GGGAACTAAAGAACTTGGACCATT 58.922 41.667 0.00 0.00 0.00 3.16
4807 8453 5.048013 GGGAACTAAAGAACTTGGACCATTG 60.048 44.000 0.00 0.00 0.00 2.82
4808 8454 5.453567 AACTAAAGAACTTGGACCATTGC 57.546 39.130 0.00 0.00 0.00 3.56
4809 8455 3.826729 ACTAAAGAACTTGGACCATTGCC 59.173 43.478 0.00 0.00 0.00 4.52
4810 8456 2.380064 AAGAACTTGGACCATTGCCA 57.620 45.000 0.00 0.00 0.00 4.92
4811 8457 2.610438 AGAACTTGGACCATTGCCAT 57.390 45.000 0.00 0.00 34.90 4.40
4812 8458 2.893424 AGAACTTGGACCATTGCCATT 58.107 42.857 0.00 0.00 34.90 3.16
4813 8459 3.242011 AGAACTTGGACCATTGCCATTT 58.758 40.909 0.00 0.00 34.90 2.32
4814 8460 3.647590 AGAACTTGGACCATTGCCATTTT 59.352 39.130 0.00 0.00 34.90 1.82
4815 8461 3.683365 ACTTGGACCATTGCCATTTTC 57.317 42.857 0.00 0.00 34.90 2.29
4816 8462 2.971330 ACTTGGACCATTGCCATTTTCA 59.029 40.909 0.00 0.00 34.90 2.69
4817 8463 3.583966 ACTTGGACCATTGCCATTTTCAT 59.416 39.130 0.00 0.00 34.90 2.57
4818 8464 3.891422 TGGACCATTGCCATTTTCATC 57.109 42.857 0.00 0.00 0.00 2.92
4819 8465 2.500910 TGGACCATTGCCATTTTCATCC 59.499 45.455 0.00 0.00 0.00 3.51
4820 8466 2.481795 GGACCATTGCCATTTTCATCCG 60.482 50.000 0.00 0.00 0.00 4.18
4821 8467 2.426738 GACCATTGCCATTTTCATCCGA 59.573 45.455 0.00 0.00 0.00 4.55
4822 8468 2.830923 ACCATTGCCATTTTCATCCGAA 59.169 40.909 0.00 0.00 0.00 4.30
4823 8469 3.119029 ACCATTGCCATTTTCATCCGAAG 60.119 43.478 0.00 0.00 31.28 3.79
4824 8470 3.130869 CCATTGCCATTTTCATCCGAAGA 59.869 43.478 0.00 0.00 31.28 2.87
4825 8471 4.357142 CATTGCCATTTTCATCCGAAGAG 58.643 43.478 0.00 0.00 31.28 2.85
4826 8472 2.368439 TGCCATTTTCATCCGAAGAGG 58.632 47.619 0.00 0.00 42.97 3.69
4840 8486 6.636562 TCCGAAGAGGAGATATAAACACTC 57.363 41.667 0.00 0.00 45.98 3.51
4841 8487 6.127101 TCCGAAGAGGAGATATAAACACTCA 58.873 40.000 0.00 0.00 45.98 3.41
4842 8488 6.039493 TCCGAAGAGGAGATATAAACACTCAC 59.961 42.308 0.00 0.00 45.98 3.51
4843 8489 5.910166 CGAAGAGGAGATATAAACACTCACG 59.090 44.000 0.00 0.00 33.00 4.35
4844 8490 6.458478 CGAAGAGGAGATATAAACACTCACGT 60.458 42.308 0.00 0.00 33.00 4.49
4845 8491 6.137794 AGAGGAGATATAAACACTCACGTG 57.862 41.667 9.94 9.94 46.63 4.49
4856 8502 2.613691 CACTCACGTGTATACCCCAAC 58.386 52.381 16.51 0.00 36.39 3.77
4857 8503 1.551883 ACTCACGTGTATACCCCAACC 59.448 52.381 16.51 0.00 0.00 3.77
4858 8504 1.829222 CTCACGTGTATACCCCAACCT 59.171 52.381 16.51 0.00 0.00 3.50
4859 8505 1.551430 TCACGTGTATACCCCAACCTG 59.449 52.381 16.51 0.00 0.00 4.00
4860 8506 1.551430 CACGTGTATACCCCAACCTGA 59.449 52.381 7.58 0.00 0.00 3.86
4861 8507 2.027929 CACGTGTATACCCCAACCTGAA 60.028 50.000 7.58 0.00 0.00 3.02
4862 8508 2.235402 ACGTGTATACCCCAACCTGAAG 59.765 50.000 0.00 0.00 0.00 3.02
4863 8509 2.235402 CGTGTATACCCCAACCTGAAGT 59.765 50.000 0.00 0.00 0.00 3.01
4864 8510 3.307199 CGTGTATACCCCAACCTGAAGTT 60.307 47.826 0.00 0.00 40.16 2.66
4865 8511 4.259356 GTGTATACCCCAACCTGAAGTTC 58.741 47.826 0.00 0.00 36.18 3.01
4866 8512 3.911260 TGTATACCCCAACCTGAAGTTCA 59.089 43.478 5.25 5.25 36.18 3.18
4867 8513 3.721087 ATACCCCAACCTGAAGTTCAG 57.279 47.619 23.58 23.58 43.91 3.02
4879 8525 4.406648 TGAAGTTCAGAGACTTGCTTGA 57.593 40.909 0.08 0.00 39.84 3.02
4880 8526 4.769688 TGAAGTTCAGAGACTTGCTTGAA 58.230 39.130 0.08 0.00 39.84 2.69
4881 8527 5.371526 TGAAGTTCAGAGACTTGCTTGAAT 58.628 37.500 0.08 0.00 39.84 2.57
4882 8528 6.524734 TGAAGTTCAGAGACTTGCTTGAATA 58.475 36.000 0.08 0.00 39.84 1.75
4883 8529 7.164122 TGAAGTTCAGAGACTTGCTTGAATAT 58.836 34.615 0.08 0.00 39.84 1.28
4884 8530 7.332926 TGAAGTTCAGAGACTTGCTTGAATATC 59.667 37.037 0.08 0.00 39.84 1.63
4885 8531 6.705302 AGTTCAGAGACTTGCTTGAATATCA 58.295 36.000 0.00 0.00 0.00 2.15
4886 8532 6.817641 AGTTCAGAGACTTGCTTGAATATCAG 59.182 38.462 0.00 0.00 0.00 2.90
4887 8533 6.535963 TCAGAGACTTGCTTGAATATCAGA 57.464 37.500 0.00 0.00 0.00 3.27
4888 8534 7.122138 TCAGAGACTTGCTTGAATATCAGAT 57.878 36.000 0.00 0.00 0.00 2.90
4889 8535 6.985059 TCAGAGACTTGCTTGAATATCAGATG 59.015 38.462 0.00 0.00 0.00 2.90
4890 8536 6.762187 CAGAGACTTGCTTGAATATCAGATGT 59.238 38.462 0.00 0.00 0.00 3.06
4891 8537 7.280428 CAGAGACTTGCTTGAATATCAGATGTT 59.720 37.037 0.00 0.00 0.00 2.71
4892 8538 8.481314 AGAGACTTGCTTGAATATCAGATGTTA 58.519 33.333 0.00 0.00 0.00 2.41
4893 8539 9.270640 GAGACTTGCTTGAATATCAGATGTTAT 57.729 33.333 0.00 0.00 0.00 1.89
4894 8540 9.624373 AGACTTGCTTGAATATCAGATGTTATT 57.376 29.630 0.00 0.00 0.00 1.40
4895 8541 9.661187 GACTTGCTTGAATATCAGATGTTATTG 57.339 33.333 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 4.383173 GTTTTAGGAACCTCGAACAAGGA 58.617 43.478 0.00 0.00 38.87 3.36
106 107 5.070001 CCATGGGATATCACCATACGTTTT 58.930 41.667 19.41 1.65 46.65 2.43
202 203 1.153107 CATGAAGGCTGATCGGGCA 60.153 57.895 28.06 9.85 0.00 5.36
217 218 0.391661 AGTTGCGTAGGCTCCACATG 60.392 55.000 9.11 0.00 40.82 3.21
231 232 2.180159 TAAGGCGGAGGTGGAGTTGC 62.180 60.000 0.00 0.00 0.00 4.17
233 234 1.286248 ATTAAGGCGGAGGTGGAGTT 58.714 50.000 0.00 0.00 0.00 3.01
234 235 1.286248 AATTAAGGCGGAGGTGGAGT 58.714 50.000 0.00 0.00 0.00 3.85
235 236 2.420058 AAATTAAGGCGGAGGTGGAG 57.580 50.000 0.00 0.00 0.00 3.86
236 237 3.109151 TCTAAATTAAGGCGGAGGTGGA 58.891 45.455 0.00 0.00 0.00 4.02
237 238 3.467803 CTCTAAATTAAGGCGGAGGTGG 58.532 50.000 0.00 0.00 0.00 4.61
238 239 2.872858 GCTCTAAATTAAGGCGGAGGTG 59.127 50.000 0.00 0.00 0.00 4.00
239 240 2.504175 TGCTCTAAATTAAGGCGGAGGT 59.496 45.455 0.00 0.00 0.00 3.85
240 241 3.194005 TGCTCTAAATTAAGGCGGAGG 57.806 47.619 0.00 0.00 0.00 4.30
241 242 4.636249 AGATGCTCTAAATTAAGGCGGAG 58.364 43.478 0.00 0.00 0.00 4.63
242 243 4.689612 AGATGCTCTAAATTAAGGCGGA 57.310 40.909 0.00 0.00 0.00 5.54
243 244 5.059833 AGAAGATGCTCTAAATTAAGGCGG 58.940 41.667 0.00 0.00 0.00 6.13
244 245 5.178438 GGAGAAGATGCTCTAAATTAAGGCG 59.822 44.000 0.00 0.00 35.26 5.52
245 246 6.295249 AGGAGAAGATGCTCTAAATTAAGGC 58.705 40.000 0.00 0.00 35.26 4.35
246 247 7.504403 TGAGGAGAAGATGCTCTAAATTAAGG 58.496 38.462 0.00 0.00 46.10 2.69
247 248 8.954950 TTGAGGAGAAGATGCTCTAAATTAAG 57.045 34.615 0.00 0.00 46.10 1.85
248 249 9.334947 CATTGAGGAGAAGATGCTCTAAATTAA 57.665 33.333 0.00 0.00 46.10 1.40
249 250 8.489489 ACATTGAGGAGAAGATGCTCTAAATTA 58.511 33.333 0.00 0.00 46.10 1.40
250 251 7.344913 ACATTGAGGAGAAGATGCTCTAAATT 58.655 34.615 0.00 0.00 46.10 1.82
251 252 6.897986 ACATTGAGGAGAAGATGCTCTAAAT 58.102 36.000 0.00 0.00 46.10 1.40
252 253 6.155910 AGACATTGAGGAGAAGATGCTCTAAA 59.844 38.462 0.00 0.00 46.10 1.85
253 254 5.660417 AGACATTGAGGAGAAGATGCTCTAA 59.340 40.000 0.00 0.00 46.10 2.10
254 255 5.207354 AGACATTGAGGAGAAGATGCTCTA 58.793 41.667 0.00 0.00 46.10 2.43
255 256 4.032310 AGACATTGAGGAGAAGATGCTCT 58.968 43.478 0.00 0.00 46.10 4.09
256 257 4.405116 AGACATTGAGGAGAAGATGCTC 57.595 45.455 0.00 0.00 46.13 4.26
257 258 4.961730 ACTAGACATTGAGGAGAAGATGCT 59.038 41.667 0.00 0.00 0.00 3.79
258 259 5.275067 ACTAGACATTGAGGAGAAGATGC 57.725 43.478 0.00 0.00 0.00 3.91
259 260 6.871844 TCAACTAGACATTGAGGAGAAGATG 58.128 40.000 0.00 0.00 32.34 2.90
260 261 7.673641 ATCAACTAGACATTGAGGAGAAGAT 57.326 36.000 0.00 0.00 39.36 2.40
261 262 7.364232 GGAATCAACTAGACATTGAGGAGAAGA 60.364 40.741 0.00 0.00 39.36 2.87
262 263 6.760770 GGAATCAACTAGACATTGAGGAGAAG 59.239 42.308 0.00 0.00 39.36 2.85
263 264 6.628175 CGGAATCAACTAGACATTGAGGAGAA 60.628 42.308 0.00 0.00 39.36 2.87
264 265 5.163509 CGGAATCAACTAGACATTGAGGAGA 60.164 44.000 0.00 0.00 39.36 3.71
265 266 5.046529 CGGAATCAACTAGACATTGAGGAG 58.953 45.833 0.00 0.00 39.36 3.69
266 267 4.466370 ACGGAATCAACTAGACATTGAGGA 59.534 41.667 0.00 0.00 39.36 3.71
267 268 4.759782 ACGGAATCAACTAGACATTGAGG 58.240 43.478 0.00 0.00 39.36 3.86
280 281 2.226437 GCAAGAGAGCAAACGGAATCAA 59.774 45.455 0.00 0.00 0.00 2.57
284 285 3.395210 TGCAAGAGAGCAAACGGAA 57.605 47.368 0.00 0.00 42.46 4.30
310 311 7.531857 AGAATGAAGAGAAGAAGGCGATATA 57.468 36.000 0.00 0.00 0.00 0.86
313 314 4.751767 AGAATGAAGAGAAGAAGGCGAT 57.248 40.909 0.00 0.00 0.00 4.58
367 368 6.470877 GCAAGAAACGAGTATACTGAGAAGAG 59.529 42.308 10.90 0.00 0.00 2.85
368 369 6.323266 GCAAGAAACGAGTATACTGAGAAGA 58.677 40.000 10.90 0.00 0.00 2.87
409 432 4.213482 GGTGGAGGCGATGAATAACAATAC 59.787 45.833 0.00 0.00 0.00 1.89
578 639 0.684153 CCAAATAGCTGGGTGGGTGG 60.684 60.000 0.00 0.00 32.32 4.61
579 640 2.886382 CCAAATAGCTGGGTGGGTG 58.114 57.895 0.00 0.00 32.32 4.61
655 813 0.320683 CAGAGATGGACAACCGCACA 60.321 55.000 0.00 0.00 39.42 4.57
700 858 4.499037 AACTAAAAAGATGGACAACCGC 57.501 40.909 0.00 0.00 39.42 5.68
733 891 5.482175 CGAGGAATTAGGATAGTCCTCCAAT 59.518 44.000 12.81 0.00 45.66 3.16
761 919 9.999009 GTACTGAGTTGGCTAATTTATTAAACC 57.001 33.333 0.00 0.00 0.00 3.27
779 943 4.760715 ACTGTCTTGATGTACGTACTGAGT 59.239 41.667 25.12 12.14 0.00 3.41
793 957 0.468226 ACTCGGCCAAACTGTCTTGA 59.532 50.000 2.24 0.00 0.00 3.02
845 1009 0.526211 GATTTGAACCCACGCCCTTC 59.474 55.000 0.00 0.00 0.00 3.46
888 1061 7.765695 AAATAAAGATGAGCTGAAAACAGGA 57.234 32.000 0.00 0.00 0.00 3.86
1677 1851 0.168788 AAATGCCGAGCACATTGACG 59.831 50.000 0.50 0.00 43.04 4.35
1688 1862 2.872245 GCTGAGCTATGTAAAATGCCGA 59.128 45.455 0.00 0.00 0.00 5.54
1719 1893 2.397413 AAACTCCCGGCCTGTGACTG 62.397 60.000 0.00 0.00 0.00 3.51
1781 1961 4.642429 ACCATCTTCCACTCTACAAACAC 58.358 43.478 0.00 0.00 0.00 3.32
1782 1962 4.974645 ACCATCTTCCACTCTACAAACA 57.025 40.909 0.00 0.00 0.00 2.83
1783 1963 5.552178 AGAACCATCTTCCACTCTACAAAC 58.448 41.667 0.00 0.00 29.15 2.93
1784 1964 5.825593 AGAACCATCTTCCACTCTACAAA 57.174 39.130 0.00 0.00 29.15 2.83
1785 1965 5.071788 ACAAGAACCATCTTCCACTCTACAA 59.928 40.000 0.00 0.00 44.11 2.41
1786 1966 4.593206 ACAAGAACCATCTTCCACTCTACA 59.407 41.667 0.00 0.00 44.11 2.74
1879 2059 3.518590 CAAATCAGCAAGATCTTTGGCC 58.481 45.455 4.86 0.00 35.39 5.36
1885 2065 4.015084 CCTTCACCAAATCAGCAAGATCT 58.985 43.478 0.00 0.00 35.39 2.75
1927 2107 0.894184 AGTGACCCACGACGACATCT 60.894 55.000 0.00 0.00 39.64 2.90
1963 2143 1.741401 CTCCGCGAAATCCAGTGCA 60.741 57.895 8.23 0.00 0.00 4.57
2114 2297 6.709145 TGCAAAATCAGACAATTTATGCAC 57.291 33.333 0.00 0.00 37.52 4.57
2175 2365 6.318144 AGGATTTTCTAGATCAACACTGCATG 59.682 38.462 0.00 0.00 0.00 4.06
2216 2406 2.993937 TGTTTCCTTCGTGTCACCTTT 58.006 42.857 0.00 0.00 0.00 3.11
2261 2451 8.850156 ACATCTCAAAGCATACTTTACTTTGTT 58.150 29.630 12.80 0.31 46.55 2.83
2284 2474 7.603180 TGCTACATTAGGATCTCTTACACAT 57.397 36.000 0.00 0.00 0.00 3.21
2303 2493 2.158943 GGAGGTTGTACTGGGATGCTAC 60.159 54.545 0.00 0.00 0.00 3.58
2324 2514 5.362556 ACAGAATCACAACAAATTCTCCG 57.637 39.130 0.00 0.00 39.59 4.63
2369 2559 9.450807 CAAGAAATCAACTACCAAGTACAAAAG 57.549 33.333 0.00 0.00 33.75 2.27
2477 5964 6.976925 GCATCAAAGGAAATAAATGAGACAGG 59.023 38.462 0.00 0.00 0.00 4.00
2543 6031 6.590292 ACTTCACCGTCACTGTTATCTATTTG 59.410 38.462 0.00 0.00 0.00 2.32
2711 6199 6.427853 TGATGCCCACTATTCGATAAAATGAG 59.572 38.462 0.00 0.00 0.00 2.90
2785 6296 3.222603 GAACCTTTTCTGTGTGATGGGT 58.777 45.455 0.00 0.00 0.00 4.51
2850 6365 2.980568 TCCATCTTTCGGCGTTGTTAT 58.019 42.857 6.85 0.00 0.00 1.89
2851 6366 2.459060 TCCATCTTTCGGCGTTGTTA 57.541 45.000 6.85 0.00 0.00 2.41
2852 6367 1.600023 TTCCATCTTTCGGCGTTGTT 58.400 45.000 6.85 0.00 0.00 2.83
2853 6368 1.468520 CATTCCATCTTTCGGCGTTGT 59.531 47.619 6.85 0.00 0.00 3.32
2916 6431 7.915293 TGTACTGGTTTTGGAATACATACTG 57.085 36.000 0.00 0.00 0.00 2.74
2975 6490 1.298340 CATGTACACCCTTCCGGCA 59.702 57.895 0.00 0.00 33.26 5.69
2989 6504 7.279313 GCATCTAGCAAAATTTTGATTCCATGT 59.721 33.333 30.40 8.68 44.79 3.21
3014 6587 7.611213 TTAAGGTTATTTTAGTGCTCTGAGC 57.389 36.000 22.38 22.38 42.82 4.26
3019 6592 7.806487 GGTGTGTTTAAGGTTATTTTAGTGCTC 59.194 37.037 0.00 0.00 0.00 4.26
3108 6681 4.818534 CGGACAAATATTGGATGTCTGG 57.181 45.455 15.51 7.42 43.50 3.86
3111 6684 2.293399 GCCCGGACAAATATTGGATGTC 59.707 50.000 0.73 9.39 42.08 3.06
3117 6690 1.663695 ACTCGCCCGGACAAATATTG 58.336 50.000 0.73 0.00 0.00 1.90
3235 6837 8.992835 AATTATCTTGAAAGAGCCAAAATGTC 57.007 30.769 0.00 0.00 38.66 3.06
3310 6912 1.705186 ACCCACCTGATAGCAAACAGT 59.295 47.619 0.00 0.00 32.93 3.55
3469 7071 5.713025 TGAGGCAAAAGATAAACTGATTGC 58.287 37.500 0.00 0.00 44.37 3.56
3473 7075 6.096141 TGTTGTTGAGGCAAAAGATAAACTGA 59.904 34.615 0.00 0.00 0.00 3.41
3480 7082 4.202151 GGAAGTGTTGTTGAGGCAAAAGAT 60.202 41.667 0.00 0.00 0.00 2.40
3487 7089 2.262423 AGAGGAAGTGTTGTTGAGGC 57.738 50.000 0.00 0.00 0.00 4.70
3489 7091 4.272018 CAGACAAGAGGAAGTGTTGTTGAG 59.728 45.833 0.00 0.00 42.57 3.02
3516 7150 3.245229 TGAAGATACCAACACAGGGCAAT 60.245 43.478 0.00 0.00 0.00 3.56
3519 7153 2.489938 TGAAGATACCAACACAGGGC 57.510 50.000 0.00 0.00 0.00 5.19
3520 7154 3.947834 GGATTGAAGATACCAACACAGGG 59.052 47.826 0.00 0.00 0.00 4.45
3521 7155 4.588899 TGGATTGAAGATACCAACACAGG 58.411 43.478 0.00 0.00 0.00 4.00
3542 7176 3.932710 ACATGACAACTAGTACGCCAATG 59.067 43.478 0.00 0.00 0.00 2.82
3548 7182 5.459107 GCAGGATTACATGACAACTAGTACG 59.541 44.000 0.00 0.00 0.00 3.67
3550 7184 6.538945 TGCAGGATTACATGACAACTAGTA 57.461 37.500 0.00 0.00 0.00 1.82
3556 7190 4.823442 GGATGATGCAGGATTACATGACAA 59.177 41.667 0.00 0.00 0.00 3.18
3561 7195 5.202765 TGTTTGGATGATGCAGGATTACAT 58.797 37.500 0.00 0.00 0.00 2.29
3746 7382 1.943507 GCCTCTCCTTGACAGTGCTTC 60.944 57.143 0.00 0.00 0.00 3.86
3771 7407 2.434359 CTTTCCCCGCGTCAGGTC 60.434 66.667 4.92 0.00 0.00 3.85
3829 7465 2.282180 CCCTTGGGGTTGTCCACG 60.282 66.667 0.00 0.00 40.71 4.94
3983 7621 5.902681 CACAAAATGCTCTCATCCAATCAT 58.097 37.500 0.00 0.00 31.27 2.45
4091 7733 3.207265 TGCACTTTCTTACCAGAGCAA 57.793 42.857 0.00 0.00 34.22 3.91
4103 7745 5.713025 ACACCATCATACATTTGCACTTTC 58.287 37.500 0.00 0.00 0.00 2.62
4147 7789 6.986250 AGAGAACGCTGATCATCATGTATTA 58.014 36.000 0.00 0.00 0.00 0.98
4151 7793 3.815856 AGAGAACGCTGATCATCATGT 57.184 42.857 0.00 0.00 0.00 3.21
4153 7795 3.869832 CACAAGAGAACGCTGATCATCAT 59.130 43.478 0.00 0.00 0.00 2.45
4154 7796 3.056607 TCACAAGAGAACGCTGATCATCA 60.057 43.478 0.00 0.00 0.00 3.07
4155 7797 3.515630 TCACAAGAGAACGCTGATCATC 58.484 45.455 0.00 0.00 0.00 2.92
4163 7805 6.448006 AGTATATGGTATCACAAGAGAACGC 58.552 40.000 0.00 0.00 0.00 4.84
4185 7827 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4186 7828 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
4187 7829 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
4188 7830 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
4189 7831 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
4190 7832 7.048512 AGAAAGACTTATATTTGGGAACGGAG 58.951 38.462 0.00 0.00 0.00 4.63
4191 7833 6.954232 AGAAAGACTTATATTTGGGAACGGA 58.046 36.000 0.00 0.00 0.00 4.69
4192 7834 8.202137 TCTAGAAAGACTTATATTTGGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
4193 7835 9.595823 TTCTAGAAAGACTTATATTTGGGAACG 57.404 33.333 1.68 0.00 0.00 3.95
4205 7847 9.847224 ACTTGTTGGAATTTCTAGAAAGACTTA 57.153 29.630 21.75 6.13 33.32 2.24
4206 7848 8.624776 CACTTGTTGGAATTTCTAGAAAGACTT 58.375 33.333 21.75 12.28 33.32 3.01
4207 7849 7.993183 TCACTTGTTGGAATTTCTAGAAAGACT 59.007 33.333 21.75 9.93 33.32 3.24
4208 7850 8.070769 GTCACTTGTTGGAATTTCTAGAAAGAC 58.929 37.037 21.75 16.79 33.32 3.01
4209 7851 7.993183 AGTCACTTGTTGGAATTTCTAGAAAGA 59.007 33.333 21.75 7.50 33.32 2.52
4210 7852 8.159344 AGTCACTTGTTGGAATTTCTAGAAAG 57.841 34.615 21.75 8.47 33.32 2.62
4211 7853 9.793259 ATAGTCACTTGTTGGAATTTCTAGAAA 57.207 29.630 19.83 19.83 34.46 2.52
4216 7858 9.314321 CGTATATAGTCACTTGTTGGAATTTCT 57.686 33.333 0.00 0.00 0.00 2.52
4217 7859 8.548721 CCGTATATAGTCACTTGTTGGAATTTC 58.451 37.037 0.00 0.00 0.00 2.17
4218 7860 8.262227 TCCGTATATAGTCACTTGTTGGAATTT 58.738 33.333 0.00 0.00 0.00 1.82
4219 7861 7.788026 TCCGTATATAGTCACTTGTTGGAATT 58.212 34.615 0.00 0.00 0.00 2.17
4220 7862 7.356089 TCCGTATATAGTCACTTGTTGGAAT 57.644 36.000 0.00 0.00 0.00 3.01
4221 7863 6.682113 GCTCCGTATATAGTCACTTGTTGGAA 60.682 42.308 0.00 0.00 0.00 3.53
4222 7864 5.221185 GCTCCGTATATAGTCACTTGTTGGA 60.221 44.000 0.00 0.00 0.00 3.53
4223 7865 4.982916 GCTCCGTATATAGTCACTTGTTGG 59.017 45.833 0.00 0.00 0.00 3.77
4224 7866 5.588240 TGCTCCGTATATAGTCACTTGTTG 58.412 41.667 0.00 0.00 0.00 3.33
4225 7867 5.847111 TGCTCCGTATATAGTCACTTGTT 57.153 39.130 0.00 0.00 0.00 2.83
4226 7868 5.847111 TTGCTCCGTATATAGTCACTTGT 57.153 39.130 0.00 0.00 0.00 3.16
4227 7869 7.438160 TCATTTTGCTCCGTATATAGTCACTTG 59.562 37.037 0.00 0.00 0.00 3.16
4228 7870 7.497595 TCATTTTGCTCCGTATATAGTCACTT 58.502 34.615 0.00 0.00 0.00 3.16
4229 7871 7.050970 TCATTTTGCTCCGTATATAGTCACT 57.949 36.000 0.00 0.00 0.00 3.41
4230 7872 6.924060 ACTCATTTTGCTCCGTATATAGTCAC 59.076 38.462 0.00 0.00 0.00 3.67
4231 7873 6.923508 CACTCATTTTGCTCCGTATATAGTCA 59.076 38.462 0.00 0.00 0.00 3.41
4232 7874 7.145985 TCACTCATTTTGCTCCGTATATAGTC 58.854 38.462 0.00 0.00 0.00 2.59
4233 7875 7.050970 TCACTCATTTTGCTCCGTATATAGT 57.949 36.000 0.00 0.00 0.00 2.12
4234 7876 7.946655 TTCACTCATTTTGCTCCGTATATAG 57.053 36.000 0.00 0.00 0.00 1.31
4235 7877 8.367911 AGATTCACTCATTTTGCTCCGTATATA 58.632 33.333 0.00 0.00 0.00 0.86
4236 7878 7.220030 AGATTCACTCATTTTGCTCCGTATAT 58.780 34.615 0.00 0.00 0.00 0.86
4237 7879 6.582636 AGATTCACTCATTTTGCTCCGTATA 58.417 36.000 0.00 0.00 0.00 1.47
4238 7880 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
4239 7881 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
4240 7882 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
4241 7883 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
4242 7884 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
4243 7885 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
4244 7886 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
4245 7887 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
4275 7917 9.511272 ACTACAACATACGGATGTATATAGACA 57.489 33.333 23.06 2.07 45.93 3.41
4282 7924 8.826710 CAAATGAACTACAACATACGGATGTAT 58.173 33.333 15.10 8.21 45.93 2.29
4283 7925 7.201574 GCAAATGAACTACAACATACGGATGTA 60.202 37.037 15.10 0.00 45.93 2.29
4285 7927 5.965334 GCAAATGAACTACAACATACGGATG 59.035 40.000 5.94 5.94 39.16 3.51
4286 7928 5.645929 TGCAAATGAACTACAACATACGGAT 59.354 36.000 0.00 0.00 0.00 4.18
4287 7929 4.998033 TGCAAATGAACTACAACATACGGA 59.002 37.500 0.00 0.00 0.00 4.69
4288 7930 5.289917 TGCAAATGAACTACAACATACGG 57.710 39.130 0.00 0.00 0.00 4.02
4289 7931 7.795431 AATTGCAAATGAACTACAACATACG 57.205 32.000 1.71 0.00 0.00 3.06
4319 7961 9.862149 TCCCTCAGTTTCTAAATCTAAGTTTTT 57.138 29.630 0.00 0.00 0.00 1.94
4320 7962 9.508642 CTCCCTCAGTTTCTAAATCTAAGTTTT 57.491 33.333 0.00 0.00 0.00 2.43
4321 7963 8.661345 ACTCCCTCAGTTTCTAAATCTAAGTTT 58.339 33.333 0.00 0.00 26.56 2.66
4322 7964 8.208575 ACTCCCTCAGTTTCTAAATCTAAGTT 57.791 34.615 0.00 0.00 26.56 2.66
4323 7965 7.800300 ACTCCCTCAGTTTCTAAATCTAAGT 57.200 36.000 0.00 0.00 26.56 2.24
4328 7970 8.994170 GCATATTACTCCCTCAGTTTCTAAATC 58.006 37.037 0.00 0.00 36.43 2.17
4329 7971 8.718656 AGCATATTACTCCCTCAGTTTCTAAAT 58.281 33.333 0.00 0.00 36.43 1.40
4330 7972 8.090788 AGCATATTACTCCCTCAGTTTCTAAA 57.909 34.615 0.00 0.00 36.43 1.85
4331 7973 7.676683 AGCATATTACTCCCTCAGTTTCTAA 57.323 36.000 0.00 0.00 36.43 2.10
4332 7974 7.039644 GCTAGCATATTACTCCCTCAGTTTCTA 60.040 40.741 10.63 0.00 36.43 2.10
4333 7975 6.239458 GCTAGCATATTACTCCCTCAGTTTCT 60.239 42.308 10.63 0.00 36.43 2.52
4334 7976 5.929415 GCTAGCATATTACTCCCTCAGTTTC 59.071 44.000 10.63 0.00 36.43 2.78
4335 7977 5.366768 TGCTAGCATATTACTCCCTCAGTTT 59.633 40.000 14.93 0.00 36.43 2.66
4336 7978 4.901849 TGCTAGCATATTACTCCCTCAGTT 59.098 41.667 14.93 0.00 36.43 3.16
4337 7979 4.483950 TGCTAGCATATTACTCCCTCAGT 58.516 43.478 14.93 0.00 39.41 3.41
4338 7980 5.674052 ATGCTAGCATATTACTCCCTCAG 57.326 43.478 28.62 0.00 34.49 3.35
4339 7981 5.307976 ACAATGCTAGCATATTACTCCCTCA 59.692 40.000 29.77 0.00 35.31 3.86
4340 7982 5.799213 ACAATGCTAGCATATTACTCCCTC 58.201 41.667 29.77 0.00 35.31 4.30
4341 7983 5.832539 ACAATGCTAGCATATTACTCCCT 57.167 39.130 29.77 8.76 35.31 4.20
4342 7984 6.702329 ACTACAATGCTAGCATATTACTCCC 58.298 40.000 29.77 0.00 35.31 4.30
4343 7985 7.607250 AGACTACAATGCTAGCATATTACTCC 58.393 38.462 29.77 15.88 35.31 3.85
4344 7986 9.134734 GAAGACTACAATGCTAGCATATTACTC 57.865 37.037 29.77 19.88 35.31 2.59
4345 7987 7.810282 CGAAGACTACAATGCTAGCATATTACT 59.190 37.037 29.77 19.52 35.31 2.24
4346 7988 7.808381 TCGAAGACTACAATGCTAGCATATTAC 59.192 37.037 29.77 17.86 35.31 1.89
4347 7989 7.882179 TCGAAGACTACAATGCTAGCATATTA 58.118 34.615 29.77 20.84 35.31 0.98
4348 7990 6.749139 TCGAAGACTACAATGCTAGCATATT 58.251 36.000 29.77 20.84 35.31 1.28
4349 7991 6.332735 TCGAAGACTACAATGCTAGCATAT 57.667 37.500 29.77 22.19 35.31 1.78
4350 7992 5.767816 TCGAAGACTACAATGCTAGCATA 57.232 39.130 29.77 14.16 35.31 3.14
4351 7993 4.655762 TCGAAGACTACAATGCTAGCAT 57.344 40.909 24.67 24.67 38.46 3.79
4352 7994 4.424626 CTTCGAAGACTACAATGCTAGCA 58.575 43.478 21.85 21.85 34.32 3.49
4365 8007 0.250338 AAGCCACACCCTTCGAAGAC 60.250 55.000 26.61 6.55 34.32 3.01
4366 8008 0.034896 GAAGCCACACCCTTCGAAGA 59.965 55.000 26.61 0.00 30.55 2.87
4415 8061 1.463674 AATTGTTGGGAGCGATGACC 58.536 50.000 0.00 0.00 0.00 4.02
4417 8063 3.278574 CCTAAATTGTTGGGAGCGATGA 58.721 45.455 0.00 0.00 37.57 2.92
4445 8091 3.153919 TGAAGGGGAACAAGCATACAAC 58.846 45.455 0.00 0.00 0.00 3.32
4456 8102 9.793259 TTAAGATATTGTATGATGAAGGGGAAC 57.207 33.333 0.00 0.00 0.00 3.62
4467 8113 7.279981 ACAAGCTGCGTTTAAGATATTGTATGA 59.720 33.333 0.00 0.00 0.00 2.15
4471 8117 5.880054 ACAAGCTGCGTTTAAGATATTGT 57.120 34.783 0.00 0.00 0.00 2.71
4474 8120 5.640732 CCAAACAAGCTGCGTTTAAGATAT 58.359 37.500 12.72 0.00 34.87 1.63
4475 8121 4.614993 GCCAAACAAGCTGCGTTTAAGATA 60.615 41.667 12.72 0.00 34.87 1.98
4478 8124 1.786579 GCCAAACAAGCTGCGTTTAAG 59.213 47.619 12.72 9.40 34.87 1.85
4480 8126 0.031449 GGCCAAACAAGCTGCGTTTA 59.969 50.000 12.72 0.00 34.87 2.01
4516 8162 1.135489 CATGTGTGCATGGAGTGAAGC 60.135 52.381 0.00 0.00 46.47 3.86
4536 8182 6.291377 TCTTGATAGAGGTCATACAAATGGC 58.709 40.000 0.00 0.00 36.96 4.40
4560 8206 1.021202 TGCGCAAACACTACAAAGCT 58.979 45.000 8.16 0.00 0.00 3.74
4582 8228 1.225376 CTACGCTTTTGTCGCCCACA 61.225 55.000 0.00 0.00 0.00 4.17
4583 8229 1.495951 CTACGCTTTTGTCGCCCAC 59.504 57.895 0.00 0.00 0.00 4.61
4592 8238 1.071814 TTGGCCGACCTACGCTTTT 59.928 52.632 0.00 0.00 41.07 2.27
4598 8244 2.813908 CAGCGTTGGCCGACCTAC 60.814 66.667 17.92 7.41 41.24 3.18
4609 8255 0.751643 AACCTCCAACAAGCAGCGTT 60.752 50.000 0.00 0.00 0.00 4.84
4611 8257 1.283793 CAACCTCCAACAAGCAGCG 59.716 57.895 0.00 0.00 0.00 5.18
4612 8258 0.746659 AACAACCTCCAACAAGCAGC 59.253 50.000 0.00 0.00 0.00 5.25
4622 8268 1.303643 CAGGGGCTCAACAACCTCC 60.304 63.158 0.00 0.00 0.00 4.30
4627 8273 0.323360 GGTATGCAGGGGCTCAACAA 60.323 55.000 0.00 0.00 41.91 2.83
4628 8274 1.302949 GGTATGCAGGGGCTCAACA 59.697 57.895 0.00 0.00 41.91 3.33
4639 8285 2.095466 CGAAAGCCTTTTTCGGTATGCA 60.095 45.455 12.72 0.00 45.17 3.96
4655 8301 6.730960 TTTATATATAAAGCGGGGCGAAAG 57.269 37.500 12.90 0.00 0.00 2.62
4656 8302 6.730960 CTTTATATATAAAGCGGGGCGAAA 57.269 37.500 25.10 1.66 41.69 3.46
4672 8318 9.461312 TTTGTACTTCTGGTTGATGCTTTATAT 57.539 29.630 0.00 0.00 0.00 0.86
4673 8319 8.856153 TTTGTACTTCTGGTTGATGCTTTATA 57.144 30.769 0.00 0.00 0.00 0.98
4674 8320 7.759489 TTTGTACTTCTGGTTGATGCTTTAT 57.241 32.000 0.00 0.00 0.00 1.40
4675 8321 7.759489 ATTTGTACTTCTGGTTGATGCTTTA 57.241 32.000 0.00 0.00 0.00 1.85
4676 8322 6.655078 ATTTGTACTTCTGGTTGATGCTTT 57.345 33.333 0.00 0.00 0.00 3.51
4677 8323 6.491403 AGAATTTGTACTTCTGGTTGATGCTT 59.509 34.615 0.00 0.00 31.84 3.91
4678 8324 6.006449 AGAATTTGTACTTCTGGTTGATGCT 58.994 36.000 0.00 0.00 31.84 3.79
4679 8325 6.259550 AGAATTTGTACTTCTGGTTGATGC 57.740 37.500 0.00 0.00 31.84 3.91
4680 8326 8.322906 TGTAGAATTTGTACTTCTGGTTGATG 57.677 34.615 6.20 0.00 34.81 3.07
4681 8327 8.918202 TTGTAGAATTTGTACTTCTGGTTGAT 57.082 30.769 6.20 0.00 34.81 2.57
4682 8328 8.740123 TTTGTAGAATTTGTACTTCTGGTTGA 57.260 30.769 6.20 0.00 34.81 3.18
4683 8329 9.965824 AATTTGTAGAATTTGTACTTCTGGTTG 57.034 29.630 6.20 0.00 34.81 3.77
4684 8330 9.965824 CAATTTGTAGAATTTGTACTTCTGGTT 57.034 29.630 6.20 0.00 34.81 3.67
4685 8331 9.131791 ACAATTTGTAGAATTTGTACTTCTGGT 57.868 29.630 10.21 0.00 35.09 4.00
4701 8347 8.697187 TGGTGCTCCTGACCTACAATTTGTAG 62.697 46.154 23.82 23.82 41.00 2.74
4702 8348 4.564821 GGTGCTCCTGACCTACAATTTGTA 60.565 45.833 8.86 8.86 0.00 2.41
4703 8349 3.412386 GTGCTCCTGACCTACAATTTGT 58.588 45.455 7.30 7.30 0.00 2.83
4704 8350 2.749621 GGTGCTCCTGACCTACAATTTG 59.250 50.000 0.00 0.00 0.00 2.32
4705 8351 2.375174 TGGTGCTCCTGACCTACAATTT 59.625 45.455 6.34 0.00 34.26 1.82
4706 8352 1.985159 TGGTGCTCCTGACCTACAATT 59.015 47.619 6.34 0.00 34.26 2.32
4707 8353 1.656587 TGGTGCTCCTGACCTACAAT 58.343 50.000 6.34 0.00 34.26 2.71
4708 8354 1.429930 TTGGTGCTCCTGACCTACAA 58.570 50.000 6.34 0.00 34.26 2.41
4709 8355 1.429930 TTTGGTGCTCCTGACCTACA 58.570 50.000 6.34 0.00 34.26 2.74
4710 8356 2.789409 ATTTGGTGCTCCTGACCTAC 57.211 50.000 6.34 0.00 34.26 3.18
4711 8357 6.763715 AATATATTTGGTGCTCCTGACCTA 57.236 37.500 6.34 0.00 34.26 3.08
4712 8358 5.653255 AATATATTTGGTGCTCCTGACCT 57.347 39.130 6.34 0.00 34.26 3.85
4713 8359 6.076981 CAAATATATTTGGTGCTCCTGACC 57.923 41.667 24.67 0.00 42.51 4.02
4714 8360 7.100458 AACAAATATATTTGGTGCTCCTGAC 57.900 36.000 31.69 0.00 45.28 3.51
4715 8361 7.716799 AAACAAATATATTTGGTGCTCCTGA 57.283 32.000 31.69 0.00 46.22 3.86
4716 8362 8.686334 ACTAAACAAATATATTTGGTGCTCCTG 58.314 33.333 31.69 18.81 46.22 3.86
4717 8363 8.823220 ACTAAACAAATATATTTGGTGCTCCT 57.177 30.769 31.69 18.39 46.22 3.69
4730 8376 9.525409 ACGACGCTAAGATTACTAAACAAATAT 57.475 29.630 0.00 0.00 0.00 1.28
4731 8377 8.915871 ACGACGCTAAGATTACTAAACAAATA 57.084 30.769 0.00 0.00 0.00 1.40
4732 8378 7.823149 ACGACGCTAAGATTACTAAACAAAT 57.177 32.000 0.00 0.00 0.00 2.32
4733 8379 7.381948 TCAACGACGCTAAGATTACTAAACAAA 59.618 33.333 0.00 0.00 0.00 2.83
4734 8380 6.862608 TCAACGACGCTAAGATTACTAAACAA 59.137 34.615 0.00 0.00 0.00 2.83
4735 8381 6.380995 TCAACGACGCTAAGATTACTAAACA 58.619 36.000 0.00 0.00 0.00 2.83
4736 8382 6.859715 TCAACGACGCTAAGATTACTAAAC 57.140 37.500 0.00 0.00 0.00 2.01
4737 8383 7.252708 TCATCAACGACGCTAAGATTACTAAA 58.747 34.615 0.00 0.00 0.00 1.85
4738 8384 6.788243 TCATCAACGACGCTAAGATTACTAA 58.212 36.000 0.00 0.00 0.00 2.24
4739 8385 6.367686 TCATCAACGACGCTAAGATTACTA 57.632 37.500 0.00 0.00 0.00 1.82
4740 8386 5.244785 TCATCAACGACGCTAAGATTACT 57.755 39.130 0.00 0.00 0.00 2.24
4741 8387 4.441415 CCTCATCAACGACGCTAAGATTAC 59.559 45.833 0.00 0.00 0.00 1.89
4742 8388 4.607955 CCTCATCAACGACGCTAAGATTA 58.392 43.478 0.00 0.00 0.00 1.75
4743 8389 3.448686 CCTCATCAACGACGCTAAGATT 58.551 45.455 0.00 0.00 0.00 2.40
4744 8390 2.799917 GCCTCATCAACGACGCTAAGAT 60.800 50.000 0.00 0.00 0.00 2.40
4745 8391 1.469251 GCCTCATCAACGACGCTAAGA 60.469 52.381 0.00 0.00 0.00 2.10
4746 8392 0.924090 GCCTCATCAACGACGCTAAG 59.076 55.000 0.00 0.00 0.00 2.18
4747 8393 0.459585 GGCCTCATCAACGACGCTAA 60.460 55.000 0.00 0.00 0.00 3.09
4748 8394 1.141019 GGCCTCATCAACGACGCTA 59.859 57.895 0.00 0.00 0.00 4.26
4749 8395 2.125512 GGCCTCATCAACGACGCT 60.126 61.111 0.00 0.00 0.00 5.07
4750 8396 0.529773 TATGGCCTCATCAACGACGC 60.530 55.000 3.32 0.00 34.96 5.19
4751 8397 2.154854 ATATGGCCTCATCAACGACG 57.845 50.000 3.32 0.00 34.96 5.12
4752 8398 4.258702 ACTATATGGCCTCATCAACGAC 57.741 45.455 3.32 0.00 34.96 4.34
4753 8399 4.343814 TCAACTATATGGCCTCATCAACGA 59.656 41.667 3.32 0.00 34.96 3.85
4754 8400 4.631131 TCAACTATATGGCCTCATCAACG 58.369 43.478 3.32 0.00 34.96 4.10
4755 8401 6.233434 TCATCAACTATATGGCCTCATCAAC 58.767 40.000 3.32 0.00 34.96 3.18
4756 8402 6.438186 TCATCAACTATATGGCCTCATCAA 57.562 37.500 3.32 0.00 34.96 2.57
4757 8403 6.631763 ATCATCAACTATATGGCCTCATCA 57.368 37.500 3.32 0.00 34.96 3.07
4758 8404 6.318144 CCAATCATCAACTATATGGCCTCATC 59.682 42.308 3.32 0.00 34.96 2.92
4759 8405 6.185511 CCAATCATCAACTATATGGCCTCAT 58.814 40.000 3.32 0.00 37.40 2.90
4760 8406 5.515359 CCCAATCATCAACTATATGGCCTCA 60.515 44.000 3.32 0.00 0.00 3.86
4761 8407 4.946157 CCCAATCATCAACTATATGGCCTC 59.054 45.833 3.32 0.00 0.00 4.70
4762 8408 4.264083 CCCCAATCATCAACTATATGGCCT 60.264 45.833 3.32 0.00 0.00 5.19
4763 8409 4.019174 CCCCAATCATCAACTATATGGCC 58.981 47.826 0.00 0.00 0.00 5.36
4764 8410 4.922206 TCCCCAATCATCAACTATATGGC 58.078 43.478 0.00 0.00 0.00 4.40
4765 8411 6.546484 AGTTCCCCAATCATCAACTATATGG 58.454 40.000 0.00 0.00 0.00 2.74
4766 8412 9.573166 TTTAGTTCCCCAATCATCAACTATATG 57.427 33.333 0.00 0.00 31.33 1.78
4767 8413 9.799106 CTTTAGTTCCCCAATCATCAACTATAT 57.201 33.333 0.00 0.00 31.33 0.86
4768 8414 8.998814 TCTTTAGTTCCCCAATCATCAACTATA 58.001 33.333 0.00 0.00 31.33 1.31
4769 8415 7.872138 TCTTTAGTTCCCCAATCATCAACTAT 58.128 34.615 0.00 0.00 31.33 2.12
4770 8416 7.265599 TCTTTAGTTCCCCAATCATCAACTA 57.734 36.000 0.00 0.00 0.00 2.24
4771 8417 6.139679 TCTTTAGTTCCCCAATCATCAACT 57.860 37.500 0.00 0.00 0.00 3.16
4772 8418 6.434340 AGTTCTTTAGTTCCCCAATCATCAAC 59.566 38.462 0.00 0.00 0.00 3.18
4773 8419 6.552008 AGTTCTTTAGTTCCCCAATCATCAA 58.448 36.000 0.00 0.00 0.00 2.57
4774 8420 6.139679 AGTTCTTTAGTTCCCCAATCATCA 57.860 37.500 0.00 0.00 0.00 3.07
4775 8421 6.127619 CCAAGTTCTTTAGTTCCCCAATCATC 60.128 42.308 0.00 0.00 0.00 2.92
4776 8422 5.716703 CCAAGTTCTTTAGTTCCCCAATCAT 59.283 40.000 0.00 0.00 0.00 2.45
4777 8423 5.076873 CCAAGTTCTTTAGTTCCCCAATCA 58.923 41.667 0.00 0.00 0.00 2.57
4778 8424 5.183331 GTCCAAGTTCTTTAGTTCCCCAATC 59.817 44.000 0.00 0.00 0.00 2.67
4779 8425 5.077564 GTCCAAGTTCTTTAGTTCCCCAAT 58.922 41.667 0.00 0.00 0.00 3.16
4780 8426 4.466827 GTCCAAGTTCTTTAGTTCCCCAA 58.533 43.478 0.00 0.00 0.00 4.12
4781 8427 3.181437 GGTCCAAGTTCTTTAGTTCCCCA 60.181 47.826 0.00 0.00 0.00 4.96
4782 8428 3.181437 TGGTCCAAGTTCTTTAGTTCCCC 60.181 47.826 0.00 0.00 0.00 4.81
4783 8429 4.094830 TGGTCCAAGTTCTTTAGTTCCC 57.905 45.455 0.00 0.00 0.00 3.97
4784 8430 5.564848 GCAATGGTCCAAGTTCTTTAGTTCC 60.565 44.000 0.00 0.00 0.00 3.62
4785 8431 5.461526 GCAATGGTCCAAGTTCTTTAGTTC 58.538 41.667 0.00 0.00 0.00 3.01
4786 8432 4.280929 GGCAATGGTCCAAGTTCTTTAGTT 59.719 41.667 0.00 0.00 0.00 2.24
4787 8433 3.826729 GGCAATGGTCCAAGTTCTTTAGT 59.173 43.478 0.00 0.00 0.00 2.24
4788 8434 3.826157 TGGCAATGGTCCAAGTTCTTTAG 59.174 43.478 0.00 0.00 0.00 1.85
4789 8435 3.838565 TGGCAATGGTCCAAGTTCTTTA 58.161 40.909 0.00 0.00 0.00 1.85
4790 8436 2.676748 TGGCAATGGTCCAAGTTCTTT 58.323 42.857 0.00 0.00 0.00 2.52
4791 8437 2.380064 TGGCAATGGTCCAAGTTCTT 57.620 45.000 0.00 0.00 0.00 2.52
4792 8438 2.610438 ATGGCAATGGTCCAAGTTCT 57.390 45.000 0.00 0.00 37.13 3.01
4793 8439 3.683365 AAATGGCAATGGTCCAAGTTC 57.317 42.857 0.00 0.00 37.13 3.01
4794 8440 3.390639 TGAAAATGGCAATGGTCCAAGTT 59.609 39.130 0.00 0.00 37.13 2.66
4795 8441 2.971330 TGAAAATGGCAATGGTCCAAGT 59.029 40.909 0.00 0.00 37.13 3.16
4796 8442 3.681593 TGAAAATGGCAATGGTCCAAG 57.318 42.857 0.00 0.00 37.13 3.61
4797 8443 3.055240 GGATGAAAATGGCAATGGTCCAA 60.055 43.478 0.00 0.00 37.13 3.53
4798 8444 2.500910 GGATGAAAATGGCAATGGTCCA 59.499 45.455 0.00 0.00 38.09 4.02
4799 8445 2.481795 CGGATGAAAATGGCAATGGTCC 60.482 50.000 0.00 0.00 0.00 4.46
4800 8446 2.426738 TCGGATGAAAATGGCAATGGTC 59.573 45.455 0.00 0.00 0.00 4.02
4801 8447 2.455557 TCGGATGAAAATGGCAATGGT 58.544 42.857 0.00 0.00 0.00 3.55
4802 8448 3.130869 TCTTCGGATGAAAATGGCAATGG 59.869 43.478 0.00 0.00 32.66 3.16
4803 8449 4.357142 CTCTTCGGATGAAAATGGCAATG 58.643 43.478 0.00 0.00 32.66 2.82
4804 8450 3.382546 CCTCTTCGGATGAAAATGGCAAT 59.617 43.478 0.00 0.00 32.66 3.56
4805 8451 2.754552 CCTCTTCGGATGAAAATGGCAA 59.245 45.455 0.00 0.00 32.66 4.52
4806 8452 2.026356 TCCTCTTCGGATGAAAATGGCA 60.026 45.455 0.00 0.00 36.69 4.92
4807 8453 2.615912 CTCCTCTTCGGATGAAAATGGC 59.384 50.000 0.00 0.00 42.12 4.40
4808 8454 4.142609 TCTCCTCTTCGGATGAAAATGG 57.857 45.455 0.00 0.00 42.12 3.16
4809 8455 9.494271 TTTATATCTCCTCTTCGGATGAAAATG 57.506 33.333 0.00 0.00 42.12 2.32
4810 8456 9.495572 GTTTATATCTCCTCTTCGGATGAAAAT 57.504 33.333 0.00 0.00 42.12 1.82
4811 8457 8.482943 TGTTTATATCTCCTCTTCGGATGAAAA 58.517 33.333 0.00 0.00 42.12 2.29
4812 8458 7.926555 GTGTTTATATCTCCTCTTCGGATGAAA 59.073 37.037 0.00 0.00 42.12 2.69
4813 8459 7.287927 AGTGTTTATATCTCCTCTTCGGATGAA 59.712 37.037 0.00 0.00 42.12 2.57
4814 8460 6.778069 AGTGTTTATATCTCCTCTTCGGATGA 59.222 38.462 0.00 0.00 42.12 2.92
4815 8461 6.987386 AGTGTTTATATCTCCTCTTCGGATG 58.013 40.000 0.00 0.00 42.12 3.51
4816 8462 6.778069 TGAGTGTTTATATCTCCTCTTCGGAT 59.222 38.462 0.00 0.00 42.12 4.18
4817 8463 6.039493 GTGAGTGTTTATATCTCCTCTTCGGA 59.961 42.308 0.00 0.00 40.30 4.55
4818 8464 6.210078 GTGAGTGTTTATATCTCCTCTTCGG 58.790 44.000 0.00 0.00 0.00 4.30
4819 8465 5.910166 CGTGAGTGTTTATATCTCCTCTTCG 59.090 44.000 0.00 0.00 0.00 3.79
4820 8466 6.797454 ACGTGAGTGTTTATATCTCCTCTTC 58.203 40.000 0.00 0.00 46.97 2.87
4821 8467 6.777213 ACGTGAGTGTTTATATCTCCTCTT 57.223 37.500 0.00 0.00 46.97 2.85
4838 8484 1.829222 AGGTTGGGGTATACACGTGAG 59.171 52.381 25.01 0.00 0.00 3.51
4839 8485 1.551430 CAGGTTGGGGTATACACGTGA 59.449 52.381 25.01 6.34 0.00 4.35
4840 8486 1.551430 TCAGGTTGGGGTATACACGTG 59.449 52.381 15.48 15.48 0.00 4.49
4841 8487 1.941377 TCAGGTTGGGGTATACACGT 58.059 50.000 5.01 0.00 0.00 4.49
4842 8488 2.235402 ACTTCAGGTTGGGGTATACACG 59.765 50.000 5.01 0.00 0.00 4.49
4843 8489 3.994931 ACTTCAGGTTGGGGTATACAC 57.005 47.619 5.01 0.00 0.00 2.90
4844 8490 3.911260 TGAACTTCAGGTTGGGGTATACA 59.089 43.478 5.01 0.00 38.41 2.29
4845 8491 4.224370 TCTGAACTTCAGGTTGGGGTATAC 59.776 45.833 17.12 0.00 44.39 1.47
4846 8492 4.431378 TCTGAACTTCAGGTTGGGGTATA 58.569 43.478 17.12 0.00 44.39 1.47
4847 8493 3.256704 TCTGAACTTCAGGTTGGGGTAT 58.743 45.455 17.12 0.00 44.39 2.73
4848 8494 2.637872 CTCTGAACTTCAGGTTGGGGTA 59.362 50.000 17.12 0.00 44.39 3.69
4849 8495 1.421646 CTCTGAACTTCAGGTTGGGGT 59.578 52.381 17.12 0.00 44.39 4.95
4850 8496 1.699634 TCTCTGAACTTCAGGTTGGGG 59.300 52.381 17.12 0.00 44.39 4.96
4851 8497 2.370189 AGTCTCTGAACTTCAGGTTGGG 59.630 50.000 17.12 5.14 44.39 4.12
4852 8498 3.760580 AGTCTCTGAACTTCAGGTTGG 57.239 47.619 17.12 7.12 44.39 3.77
4853 8499 3.249559 GCAAGTCTCTGAACTTCAGGTTG 59.750 47.826 17.12 15.20 44.39 3.77
4854 8500 3.135530 AGCAAGTCTCTGAACTTCAGGTT 59.864 43.478 17.12 5.26 44.39 3.50
4855 8501 2.703007 AGCAAGTCTCTGAACTTCAGGT 59.297 45.455 17.12 0.00 44.39 4.00
4856 8502 3.399440 AGCAAGTCTCTGAACTTCAGG 57.601 47.619 17.12 9.23 44.39 3.86
4857 8503 4.375272 TCAAGCAAGTCTCTGAACTTCAG 58.625 43.478 12.02 12.02 45.59 3.02
4858 8504 4.406648 TCAAGCAAGTCTCTGAACTTCA 57.593 40.909 0.00 0.00 37.38 3.02
4859 8505 5.938438 ATTCAAGCAAGTCTCTGAACTTC 57.062 39.130 0.00 0.00 37.38 3.01
4860 8506 7.164122 TGATATTCAAGCAAGTCTCTGAACTT 58.836 34.615 0.00 1.18 40.08 2.66
4861 8507 6.705302 TGATATTCAAGCAAGTCTCTGAACT 58.295 36.000 0.00 0.00 0.00 3.01
4862 8508 6.815641 TCTGATATTCAAGCAAGTCTCTGAAC 59.184 38.462 0.00 0.00 0.00 3.18
4863 8509 6.939622 TCTGATATTCAAGCAAGTCTCTGAA 58.060 36.000 0.00 0.00 0.00 3.02
4864 8510 6.535963 TCTGATATTCAAGCAAGTCTCTGA 57.464 37.500 0.00 0.00 0.00 3.27
4865 8511 6.762187 ACATCTGATATTCAAGCAAGTCTCTG 59.238 38.462 0.00 0.00 0.00 3.35
4866 8512 6.887013 ACATCTGATATTCAAGCAAGTCTCT 58.113 36.000 0.00 0.00 0.00 3.10
4867 8513 7.551035 AACATCTGATATTCAAGCAAGTCTC 57.449 36.000 0.00 0.00 0.00 3.36
4868 8514 9.624373 AATAACATCTGATATTCAAGCAAGTCT 57.376 29.630 0.00 0.00 0.00 3.24
4869 8515 9.661187 CAATAACATCTGATATTCAAGCAAGTC 57.339 33.333 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.