Multiple sequence alignment - TraesCS3D01G363100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G363100 chr3D 100.000 5436 0 0 1451 6886 477453405 477447970 0.000000e+00 10039.0
1 TraesCS3D01G363100 chr3D 100.000 1184 0 0 1 1184 477454855 477453672 0.000000e+00 2187.0
2 TraesCS3D01G363100 chr3D 91.304 161 8 3 784 938 477453832 477453672 1.500000e-51 215.0
3 TraesCS3D01G363100 chr3D 91.304 161 8 3 1024 1184 477454072 477453918 1.500000e-51 215.0
4 TraesCS3D01G363100 chr3A 92.955 4159 212 42 2132 6231 620997976 620993840 0.000000e+00 5982.0
5 TraesCS3D01G363100 chr3A 89.057 594 43 9 6310 6886 620993719 620993131 0.000000e+00 717.0
6 TraesCS3D01G363100 chr3A 93.556 419 20 6 1451 1867 620998775 620998362 9.810000e-173 617.0
7 TraesCS3D01G363100 chr3A 91.398 186 11 3 762 944 620999079 620998896 4.120000e-62 250.0
8 TraesCS3D01G363100 chr3A 90.968 155 8 4 1032 1184 620999052 620998902 3.260000e-48 204.0
9 TraesCS3D01G363100 chr3A 90.217 92 8 1 635 726 620999243 620999153 1.210000e-22 119.0
10 TraesCS3D01G363100 chr3A 98.413 63 1 0 959 1021 620998912 620998850 2.030000e-20 111.0
11 TraesCS3D01G363100 chr3B 95.537 2689 89 19 2132 4797 636742383 636739703 0.000000e+00 4272.0
12 TraesCS3D01G363100 chr3B 96.821 755 20 4 4795 5548 636739618 636738867 0.000000e+00 1258.0
13 TraesCS3D01G363100 chr3B 90.387 697 48 15 5560 6241 636738757 636738065 0.000000e+00 898.0
14 TraesCS3D01G363100 chr3B 90.108 465 32 8 6314 6766 636737943 636737481 5.950000e-165 592.0
15 TraesCS3D01G363100 chr3B 86.373 499 58 9 190 684 636746470 636745978 2.830000e-148 536.0
16 TraesCS3D01G363100 chr3B 88.918 379 32 7 1451 1826 636742751 636742380 6.290000e-125 459.0
17 TraesCS3D01G363100 chr3B 89.453 256 10 11 776 1021 636743074 636742826 2.410000e-79 307.0
18 TraesCS3D01G363100 chr3B 88.957 163 5 5 1027 1184 636743063 636742909 9.120000e-44 189.0
19 TraesCS3D01G363100 chr3B 89.623 106 8 2 673 776 636744934 636744830 1.560000e-26 132.0
20 TraesCS3D01G363100 chr6A 92.424 66 5 0 1453 1518 80093047 80092982 2.040000e-15 95.3
21 TraesCS3D01G363100 chr7B 97.500 40 1 0 1936 1975 213475859 213475820 1.240000e-07 69.4
22 TraesCS3D01G363100 chr7B 93.023 43 3 0 1933 1975 622269759 622269801 5.770000e-06 63.9
23 TraesCS3D01G363100 chr7B 100.000 30 0 0 1934 1963 54501783 54501812 1.000000e-03 56.5
24 TraesCS3D01G363100 chr7A 95.000 40 2 0 1936 1975 252196871 252196832 5.770000e-06 63.9
25 TraesCS3D01G363100 chr7A 95.000 40 2 0 1936 1975 678142625 678142664 5.770000e-06 63.9
26 TraesCS3D01G363100 chr7A 92.500 40 2 1 1923 1961 327910839 327910800 1.000000e-03 56.5
27 TraesCS3D01G363100 chr2A 95.000 40 2 0 1937 1976 193548291 193548330 5.770000e-06 63.9
28 TraesCS3D01G363100 chr2A 90.698 43 4 0 4408 4450 87866714 87866672 2.680000e-04 58.4
29 TraesCS3D01G363100 chr4A 96.875 32 1 0 4402 4433 185863191 185863222 3.000000e-03 54.7
30 TraesCS3D01G363100 chr2B 90.476 42 2 2 1936 1975 733475263 733475304 3.000000e-03 54.7
31 TraesCS3D01G363100 chr2B 100.000 29 0 0 1933 1961 753242565 753242537 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G363100 chr3D 477447970 477454855 6885 True 3164.000000 10039 95.652000 1 6886 4 chr3D.!!$R1 6885
1 TraesCS3D01G363100 chr3A 620993131 620999243 6112 True 1142.857143 5982 92.366286 635 6886 7 chr3A.!!$R1 6251
2 TraesCS3D01G363100 chr3B 636737481 636746470 8989 True 960.333333 4272 90.686333 190 6766 9 chr3B.!!$R1 6576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
115 116 0.032952 TGCACCAGTACACCGAGTTC 59.967 55.000 0.00 0.00 0.00 3.01 F
122 123 0.109412 GTACACCGAGTTCGTGGAGG 60.109 60.000 0.48 0.00 37.74 4.30 F
1108 3970 0.038618 GGCCCAACCACATTTCGAAC 60.039 55.000 0.00 0.00 38.86 3.95 F
1112 3974 0.041663 CAACCACATTTCGAACGCGT 60.042 50.000 5.58 5.58 38.98 6.01 F
1952 4846 0.042131 ACATACTCCCTCGGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12 F
2139 5146 0.323629 TTAGGCACCGCTGCTTAACT 59.676 50.000 3.38 0.00 39.38 2.24 F
2990 6017 1.278985 CTGGTGCAGAGTACCATCCAA 59.721 52.381 7.41 0.00 46.41 3.53 F
3024 6051 0.036765 GTTGCTCCATACACCACCGA 60.037 55.000 0.00 0.00 0.00 4.69 F
3317 6351 1.309950 CATCTGGATGGCAGCTTCAG 58.690 55.000 1.50 2.42 35.24 3.02 F
3347 6381 2.338500 GTGAAGAGGAAGGTAAGCACG 58.662 52.381 0.00 0.00 0.00 5.34 F
4076 7115 3.617263 CGCTACTTTTAATTCTCGTGCCT 59.383 43.478 0.00 0.00 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1093 3955 0.041663 ACGCGTTCGAAATGTGGTTG 60.042 50.000 5.58 0.00 39.41 3.77 R
1117 3979 0.470766 ACAAGCCCAACCTACACGAA 59.529 50.000 0.00 0.00 0.00 3.85 R
2028 5035 0.654683 CGATTGCTAAGCTCCTGCAC 59.345 55.000 7.58 0.00 42.74 4.57 R
2035 5042 1.480219 GCGTACGCGATTGCTAAGCT 61.480 55.000 26.17 0.00 41.33 3.74 R
2990 6017 2.017049 AGCAACTGAAAACGAACAGCT 58.983 42.857 0.00 0.00 37.61 4.24 R
3024 6051 2.687370 GCCAGCGAAATGGATTTTGTT 58.313 42.857 5.98 0.00 43.57 2.83 R
4636 7678 1.001974 TGGCAACGCTCAGTTATCTGT 59.998 47.619 0.83 0.00 42.02 3.41 R
4641 7683 1.961793 AACTTGGCAACGCTCAGTTA 58.038 45.000 0.00 0.00 42.02 2.24 R
5280 8413 0.241749 CTGAAAGCCAGCGCAAATCA 59.758 50.000 11.47 4.17 35.89 2.57 R
5470 8603 1.339610 GCATTGGTTAGTGGTGTGCAA 59.660 47.619 0.00 0.00 0.00 4.08 R
5991 9233 0.030369 GGGTCGCCATACGTACTGAG 59.970 60.000 0.00 0.00 44.19 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.006672 GTGGTCAACACTCAGGTGG 57.993 57.895 0.00 0.00 46.72 4.61
23 24 1.148273 TGGTCAACACTCAGGTGGC 59.852 57.895 1.29 0.00 46.85 5.01
24 25 1.148273 GGTCAACACTCAGGTGGCA 59.852 57.895 1.29 0.00 42.90 4.92
25 26 0.465460 GGTCAACACTCAGGTGGCAA 60.465 55.000 0.00 0.00 42.90 4.52
26 27 0.947244 GTCAACACTCAGGTGGCAAG 59.053 55.000 0.00 0.00 46.85 4.01
27 28 0.179020 TCAACACTCAGGTGGCAAGG 60.179 55.000 0.00 0.00 46.85 3.61
28 29 0.179020 CAACACTCAGGTGGCAAGGA 60.179 55.000 0.00 0.00 46.85 3.36
29 30 0.550914 AACACTCAGGTGGCAAGGAA 59.449 50.000 0.00 0.00 46.85 3.36
30 31 0.109342 ACACTCAGGTGGCAAGGAAG 59.891 55.000 0.00 0.00 46.85 3.46
31 32 0.607489 CACTCAGGTGGCAAGGAAGG 60.607 60.000 0.00 0.00 39.59 3.46
32 33 0.768221 ACTCAGGTGGCAAGGAAGGA 60.768 55.000 0.00 0.00 0.00 3.36
33 34 0.322008 CTCAGGTGGCAAGGAAGGAC 60.322 60.000 0.00 0.00 0.00 3.85
34 35 1.303643 CAGGTGGCAAGGAAGGACC 60.304 63.158 0.00 0.00 39.35 4.46
35 36 2.359975 GGTGGCAAGGAAGGACCG 60.360 66.667 0.00 0.00 44.74 4.79
36 37 2.747686 GTGGCAAGGAAGGACCGA 59.252 61.111 0.00 0.00 44.74 4.69
37 38 1.376037 GTGGCAAGGAAGGACCGAG 60.376 63.158 0.00 0.00 44.74 4.63
38 39 1.535444 TGGCAAGGAAGGACCGAGA 60.535 57.895 0.00 0.00 44.74 4.04
39 40 1.219393 GGCAAGGAAGGACCGAGAG 59.781 63.158 0.00 0.00 44.74 3.20
51 52 2.125512 CGAGAGGCAAGGGAACGG 60.126 66.667 0.00 0.00 0.00 4.44
52 53 2.436824 GAGAGGCAAGGGAACGGC 60.437 66.667 0.00 0.00 35.20 5.68
53 54 2.930562 AGAGGCAAGGGAACGGCT 60.931 61.111 0.00 0.00 41.35 5.52
54 55 2.034221 GAGGCAAGGGAACGGCTT 59.966 61.111 0.00 0.00 38.29 4.35
55 56 2.282462 AGGCAAGGGAACGGCTTG 60.282 61.111 0.00 0.00 33.63 4.01
57 58 4.404654 GCAAGGGAACGGCTTGCG 62.405 66.667 0.00 0.00 41.93 4.85
58 59 3.737172 CAAGGGAACGGCTTGCGG 61.737 66.667 0.00 0.00 0.00 5.69
82 83 2.872557 CCGTCGACGAGGCTTACA 59.127 61.111 37.65 0.00 43.02 2.41
83 84 1.432251 CCGTCGACGAGGCTTACAT 59.568 57.895 37.65 0.00 43.02 2.29
84 85 0.866061 CCGTCGACGAGGCTTACATG 60.866 60.000 37.65 13.95 43.02 3.21
85 86 0.866061 CGTCGACGAGGCTTACATGG 60.866 60.000 33.35 0.00 43.02 3.66
86 87 1.141019 TCGACGAGGCTTACATGGC 59.859 57.895 0.00 0.00 0.00 4.40
87 88 2.230940 CGACGAGGCTTACATGGCG 61.231 63.158 0.00 0.00 37.59 5.69
88 89 1.883084 GACGAGGCTTACATGGCGG 60.883 63.158 0.00 0.00 37.59 6.13
89 90 2.292794 GACGAGGCTTACATGGCGGA 62.293 60.000 0.00 0.00 37.59 5.54
90 91 1.883084 CGAGGCTTACATGGCGGAC 60.883 63.158 0.00 0.00 37.59 4.79
91 92 1.523938 GAGGCTTACATGGCGGACC 60.524 63.158 0.00 0.00 37.59 4.46
92 93 1.972660 GAGGCTTACATGGCGGACCT 61.973 60.000 0.00 0.00 36.63 3.85
93 94 1.077716 GGCTTACATGGCGGACCTT 60.078 57.895 0.00 0.00 36.63 3.50
94 95 1.376609 GGCTTACATGGCGGACCTTG 61.377 60.000 0.00 0.00 44.74 3.61
95 96 1.376609 GCTTACATGGCGGACCTTGG 61.377 60.000 0.00 0.00 43.75 3.61
96 97 0.035439 CTTACATGGCGGACCTTGGT 60.035 55.000 0.00 0.00 43.75 3.67
97 98 0.322098 TTACATGGCGGACCTTGGTG 60.322 55.000 0.00 0.00 43.75 4.17
98 99 2.813226 TACATGGCGGACCTTGGTGC 62.813 60.000 0.00 0.00 43.75 5.01
99 100 3.965258 ATGGCGGACCTTGGTGCA 61.965 61.111 11.65 0.00 36.63 4.57
100 101 4.947147 TGGCGGACCTTGGTGCAC 62.947 66.667 8.80 8.80 36.63 4.57
102 103 4.947147 GCGGACCTTGGTGCACCA 62.947 66.667 34.74 34.74 45.94 4.17
111 112 2.738480 GGTGCACCAGTACACCGA 59.262 61.111 31.23 0.00 46.32 4.69
112 113 1.374252 GGTGCACCAGTACACCGAG 60.374 63.158 31.23 0.00 46.32 4.63
113 114 1.366366 GTGCACCAGTACACCGAGT 59.634 57.895 5.22 0.00 0.00 4.18
114 115 0.249741 GTGCACCAGTACACCGAGTT 60.250 55.000 5.22 0.00 0.00 3.01
115 116 0.032952 TGCACCAGTACACCGAGTTC 59.967 55.000 0.00 0.00 0.00 3.01
116 117 1.007336 GCACCAGTACACCGAGTTCG 61.007 60.000 0.00 0.00 39.44 3.95
117 118 0.313043 CACCAGTACACCGAGTTCGT 59.687 55.000 0.00 0.00 37.74 3.85
118 119 0.313043 ACCAGTACACCGAGTTCGTG 59.687 55.000 0.00 2.37 37.74 4.35
119 120 0.388134 CCAGTACACCGAGTTCGTGG 60.388 60.000 0.00 0.00 37.74 4.94
120 121 0.594602 CAGTACACCGAGTTCGTGGA 59.405 55.000 0.00 0.00 37.74 4.02
121 122 0.879765 AGTACACCGAGTTCGTGGAG 59.120 55.000 0.00 0.00 37.74 3.86
122 123 0.109412 GTACACCGAGTTCGTGGAGG 60.109 60.000 0.48 0.00 37.74 4.30
123 124 1.870055 TACACCGAGTTCGTGGAGGC 61.870 60.000 0.48 0.00 37.74 4.70
124 125 4.052229 ACCGAGTTCGTGGAGGCG 62.052 66.667 0.48 0.00 37.74 5.52
125 126 4.796231 CCGAGTTCGTGGAGGCGG 62.796 72.222 0.48 0.00 37.74 6.13
126 127 3.744719 CGAGTTCGTGGAGGCGGA 61.745 66.667 0.00 0.00 34.11 5.54
127 128 2.182030 GAGTTCGTGGAGGCGGAG 59.818 66.667 0.00 0.00 0.00 4.63
145 146 4.554363 CGCCGCCTGTACGAGGAG 62.554 72.222 13.57 10.55 46.33 3.69
146 147 4.874977 GCCGCCTGTACGAGGAGC 62.875 72.222 13.57 11.26 46.33 4.70
147 148 4.554363 CCGCCTGTACGAGGAGCG 62.554 72.222 13.57 10.53 46.33 5.03
149 150 2.409651 GCCTGTACGAGGAGCGAG 59.590 66.667 13.57 0.00 46.33 5.03
150 151 2.409651 CCTGTACGAGGAGCGAGC 59.590 66.667 5.67 0.00 46.33 5.03
151 152 2.023461 CTGTACGAGGAGCGAGCG 59.977 66.667 0.00 0.00 44.57 5.03
152 153 3.456431 CTGTACGAGGAGCGAGCGG 62.456 68.421 0.00 0.00 44.57 5.52
153 154 3.507009 GTACGAGGAGCGAGCGGT 61.507 66.667 0.00 0.00 44.57 5.68
154 155 3.200593 TACGAGGAGCGAGCGGTC 61.201 66.667 13.11 13.11 44.57 4.79
175 176 4.222847 GGGGCGGAGGTCATCGTC 62.223 72.222 0.00 0.00 0.00 4.20
176 177 4.222847 GGGCGGAGGTCATCGTCC 62.223 72.222 0.00 0.00 43.99 4.79
177 178 3.148279 GGCGGAGGTCATCGTCCT 61.148 66.667 5.62 0.00 43.88 3.85
185 186 4.985538 GAGGTCATCGTCCTCTAAAGAA 57.014 45.455 4.91 0.00 45.56 2.52
186 187 4.927422 GAGGTCATCGTCCTCTAAAGAAG 58.073 47.826 4.91 0.00 45.56 2.85
187 188 4.601084 AGGTCATCGTCCTCTAAAGAAGA 58.399 43.478 0.00 0.00 0.00 2.87
197 198 3.516615 CTCTAAAGAAGAGGAGGCAACG 58.483 50.000 0.00 0.00 46.98 4.10
199 200 3.769844 TCTAAAGAAGAGGAGGCAACGAT 59.230 43.478 0.00 0.00 46.39 3.73
237 238 2.032030 ACTTTGACGTTGAAGAATGGCG 60.032 45.455 15.92 0.00 0.00 5.69
248 249 3.941483 TGAAGAATGGCGAAGAATCTTCC 59.059 43.478 16.49 9.58 33.34 3.46
270 271 2.969238 CTCCGGCGATGATGGCAC 60.969 66.667 9.30 0.00 0.00 5.01
271 272 4.889856 TCCGGCGATGATGGCACG 62.890 66.667 9.30 2.83 0.00 5.34
301 303 0.990282 CCATGGGAGGTGGGATGTCT 60.990 60.000 2.85 0.00 32.98 3.41
303 305 2.342659 CATGGGAGGTGGGATGTCTAT 58.657 52.381 0.00 0.00 0.00 1.98
305 307 1.059913 GGGAGGTGGGATGTCTATGG 58.940 60.000 0.00 0.00 0.00 2.74
308 310 0.647738 AGGTGGGATGTCTATGGGGA 59.352 55.000 0.00 0.00 0.00 4.81
309 311 0.765510 GGTGGGATGTCTATGGGGAC 59.234 60.000 0.00 0.00 36.81 4.46
310 312 1.695989 GGTGGGATGTCTATGGGGACT 60.696 57.143 0.00 0.00 37.16 3.85
311 313 1.417890 GTGGGATGTCTATGGGGACTG 59.582 57.143 0.00 0.00 37.16 3.51
313 315 1.695989 GGGATGTCTATGGGGACTGGT 60.696 57.143 0.00 0.00 37.16 4.00
315 317 1.341531 GATGTCTATGGGGACTGGTCG 59.658 57.143 0.00 0.00 37.16 4.79
329 332 1.737008 GGTCGACCCTCGCAAAGTC 60.737 63.158 24.75 0.00 40.21 3.01
346 349 6.257193 CGCAAAGTCCGATTAGTAAGGTTTAT 59.743 38.462 0.00 0.00 0.00 1.40
351 354 8.713737 AGTCCGATTAGTAAGGTTTATGTTTC 57.286 34.615 0.00 0.00 0.00 2.78
376 379 9.199982 TCTGTTTAAAACTAGACTATGTTTCGG 57.800 33.333 0.00 4.73 35.63 4.30
379 382 7.894376 TTAAAACTAGACTATGTTTCGGTGG 57.106 36.000 0.00 0.00 35.63 4.61
381 384 5.934402 AACTAGACTATGTTTCGGTGGAT 57.066 39.130 0.00 0.00 0.00 3.41
382 385 5.263968 ACTAGACTATGTTTCGGTGGATG 57.736 43.478 0.00 0.00 0.00 3.51
388 391 7.788026 AGACTATGTTTCGGTGGATGTTAATA 58.212 34.615 0.00 0.00 0.00 0.98
425 428 8.238631 GTCGAGATTCTGACTAAGTTTTACTCT 58.761 37.037 0.00 0.00 32.37 3.24
428 431 7.671302 AGATTCTGACTAAGTTTTACTCTGCA 58.329 34.615 0.00 0.00 0.00 4.41
472 476 4.261280 GGAGATCGGTAGAGTTGCTCTAAC 60.261 50.000 10.32 10.32 44.66 2.34
487 491 7.279313 AGTTGCTCTAACACGTAAGAAAAGAAA 59.721 33.333 0.00 0.00 41.88 2.52
488 492 7.542534 TGCTCTAACACGTAAGAAAAGAAAA 57.457 32.000 0.00 0.00 43.62 2.29
489 493 7.627340 TGCTCTAACACGTAAGAAAAGAAAAG 58.373 34.615 0.00 0.00 43.62 2.27
490 494 7.493320 TGCTCTAACACGTAAGAAAAGAAAAGA 59.507 33.333 0.00 0.00 43.62 2.52
515 519 9.392021 GAAAAACTGAAAAGAAAATTTTGCACA 57.608 25.926 8.47 1.23 0.00 4.57
566 570 2.572104 ACTGGGACATAACCAAGTCTCC 59.428 50.000 0.00 0.00 39.80 3.71
567 571 1.553248 TGGGACATAACCAAGTCTCCG 59.447 52.381 0.00 0.00 34.31 4.63
569 573 2.418334 GGGACATAACCAAGTCTCCGTC 60.418 54.545 0.00 0.00 35.18 4.79
572 576 3.660865 ACATAACCAAGTCTCCGTCAAC 58.339 45.455 0.00 0.00 0.00 3.18
574 578 4.525487 ACATAACCAAGTCTCCGTCAACTA 59.475 41.667 0.00 0.00 0.00 2.24
585 589 6.043411 GTCTCCGTCAACTAAGATTTAGCAT 58.957 40.000 0.00 0.00 0.00 3.79
610 614 6.844696 ACTGCACCTAAATTGTACATATCG 57.155 37.500 0.00 0.00 0.00 2.92
661 665 0.741221 CTTTCCTACTGCTCCACGGC 60.741 60.000 0.00 0.00 0.00 5.68
702 1760 0.591659 GACGGGAGCAAACAAGAACC 59.408 55.000 0.00 0.00 0.00 3.62
703 1761 0.182775 ACGGGAGCAAACAAGAACCT 59.817 50.000 0.00 0.00 0.00 3.50
785 1881 7.061326 TGAGACAAAAACTTTGAAAGCGTAAAC 59.939 33.333 4.57 0.00 0.00 2.01
787 1883 6.160684 ACAAAAACTTTGAAAGCGTAAACCT 58.839 32.000 4.57 0.00 0.00 3.50
788 3645 6.309494 ACAAAAACTTTGAAAGCGTAAACCTC 59.691 34.615 4.57 0.00 0.00 3.85
789 3646 4.563337 AACTTTGAAAGCGTAAACCTCC 57.437 40.909 4.57 0.00 0.00 4.30
866 3724 1.953017 CCCAACCGCATTTCGAACA 59.047 52.632 0.00 0.00 41.67 3.18
881 3739 2.963969 CGAACACGTCGTTTTCATGTT 58.036 42.857 20.72 10.06 45.09 2.71
932 3792 3.072486 TAACGGCCCGCTCACTAGC 62.072 63.158 1.23 0.00 45.86 3.42
939 3799 2.262603 CGCTCACTAGCCACTGCA 59.737 61.111 0.00 0.00 46.68 4.41
946 3806 2.168521 TCACTAGCCACTGCATCTTACC 59.831 50.000 0.00 0.00 41.13 2.85
950 3810 0.464554 GCCACTGCATCTTACCCCTC 60.465 60.000 0.00 0.00 37.47 4.30
951 3811 0.911769 CCACTGCATCTTACCCCTCA 59.088 55.000 0.00 0.00 0.00 3.86
1033 3895 3.047877 CGCCGCGAACCTCCTTTT 61.048 61.111 8.23 0.00 0.00 2.27
1035 3897 2.258726 GCCGCGAACCTCCTTTTGT 61.259 57.895 8.23 0.00 0.00 2.83
1036 3898 1.792118 GCCGCGAACCTCCTTTTGTT 61.792 55.000 8.23 0.00 0.00 2.83
1037 3899 0.666374 CCGCGAACCTCCTTTTGTTT 59.334 50.000 8.23 0.00 0.00 2.83
1038 3900 1.066454 CCGCGAACCTCCTTTTGTTTT 59.934 47.619 8.23 0.00 0.00 2.43
1039 3901 2.480587 CCGCGAACCTCCTTTTGTTTTT 60.481 45.455 8.23 0.00 0.00 1.94
1057 3919 3.859411 TTTTGCAAACCTCTTGTTCGT 57.141 38.095 12.39 0.00 35.67 3.85
1058 3920 2.842208 TTGCAAACCTCTTGTTCGTG 57.158 45.000 0.00 0.00 35.67 4.35
1059 3921 2.031258 TGCAAACCTCTTGTTCGTGA 57.969 45.000 0.00 0.00 35.67 4.35
1060 3922 2.360844 TGCAAACCTCTTGTTCGTGAA 58.639 42.857 0.00 0.00 35.67 3.18
1061 3923 2.096819 TGCAAACCTCTTGTTCGTGAAC 59.903 45.455 5.80 5.80 41.50 3.18
1077 3939 2.859538 GTGAACACGACAAGTTTACGGA 59.140 45.455 0.00 0.00 0.00 4.69
1079 3941 2.144482 ACACGACAAGTTTACGGAGG 57.856 50.000 0.00 0.00 0.00 4.30
1080 3942 0.788391 CACGACAAGTTTACGGAGGC 59.212 55.000 0.00 0.00 0.00 4.70
1081 3943 0.320160 ACGACAAGTTTACGGAGGCC 60.320 55.000 0.00 0.00 0.00 5.19
1101 3963 2.445155 GGAAGGGCCCAACCACAT 59.555 61.111 27.56 0.00 42.05 3.21
1102 3964 1.229177 GGAAGGGCCCAACCACATT 60.229 57.895 27.56 7.33 42.05 2.71
1103 3965 0.835971 GGAAGGGCCCAACCACATTT 60.836 55.000 27.56 6.42 42.05 2.32
1104 3966 0.608130 GAAGGGCCCAACCACATTTC 59.392 55.000 27.56 12.68 42.05 2.17
1105 3967 1.184970 AAGGGCCCAACCACATTTCG 61.185 55.000 27.56 0.00 42.05 3.46
1106 3968 1.605165 GGGCCCAACCACATTTCGA 60.605 57.895 19.95 0.00 42.05 3.71
1107 3969 1.182385 GGGCCCAACCACATTTCGAA 61.182 55.000 19.95 0.00 42.05 3.71
1108 3970 0.038618 GGCCCAACCACATTTCGAAC 60.039 55.000 0.00 0.00 38.86 3.95
1109 3971 0.386731 GCCCAACCACATTTCGAACG 60.387 55.000 0.00 0.00 0.00 3.95
1110 3972 0.386731 CCCAACCACATTTCGAACGC 60.387 55.000 0.00 0.00 0.00 4.84
1111 3973 0.724453 CCAACCACATTTCGAACGCG 60.724 55.000 3.53 3.53 39.35 6.01
1112 3974 0.041663 CAACCACATTTCGAACGCGT 60.042 50.000 5.58 5.58 38.98 6.01
1113 3975 1.192757 CAACCACATTTCGAACGCGTA 59.807 47.619 14.46 0.00 38.98 4.42
1114 3976 1.065358 ACCACATTTCGAACGCGTAG 58.935 50.000 14.46 10.64 38.98 3.51
1115 3977 1.065358 CCACATTTCGAACGCGTAGT 58.935 50.000 14.46 0.00 38.98 2.73
1117 3979 2.096614 CCACATTTCGAACGCGTAGTTT 60.097 45.455 14.46 0.00 44.35 2.66
1118 3980 3.537806 CACATTTCGAACGCGTAGTTTT 58.462 40.909 14.46 0.00 44.35 2.43
1119 3981 3.592383 CACATTTCGAACGCGTAGTTTTC 59.408 43.478 14.46 4.71 44.35 2.29
1120 3982 2.541807 TTTCGAACGCGTAGTTTTCG 57.458 45.000 20.86 20.86 44.35 3.46
1121 3983 1.476074 TTCGAACGCGTAGTTTTCGT 58.524 45.000 24.36 2.83 44.35 3.85
1122 3984 0.771756 TCGAACGCGTAGTTTTCGTG 59.228 50.000 24.36 3.85 44.35 4.35
1127 3989 1.689959 CGCGTAGTTTTCGTGTAGGT 58.310 50.000 0.00 0.00 34.71 3.08
1128 3990 2.053627 CGCGTAGTTTTCGTGTAGGTT 58.946 47.619 0.00 0.00 34.71 3.50
1129 3991 2.160065 CGCGTAGTTTTCGTGTAGGTTG 60.160 50.000 0.00 0.00 34.71 3.77
1130 3992 2.156310 GCGTAGTTTTCGTGTAGGTTGG 59.844 50.000 0.00 0.00 0.00 3.77
1131 3993 2.733026 CGTAGTTTTCGTGTAGGTTGGG 59.267 50.000 0.00 0.00 0.00 4.12
1132 3994 1.601166 AGTTTTCGTGTAGGTTGGGC 58.399 50.000 0.00 0.00 0.00 5.36
1133 3995 1.142262 AGTTTTCGTGTAGGTTGGGCT 59.858 47.619 0.00 0.00 0.00 5.19
1134 3996 1.951602 GTTTTCGTGTAGGTTGGGCTT 59.048 47.619 0.00 0.00 0.00 4.35
1135 3997 1.600023 TTTCGTGTAGGTTGGGCTTG 58.400 50.000 0.00 0.00 0.00 4.01
1136 3998 0.470766 TTCGTGTAGGTTGGGCTTGT 59.529 50.000 0.00 0.00 0.00 3.16
1137 3999 1.340088 TCGTGTAGGTTGGGCTTGTA 58.660 50.000 0.00 0.00 0.00 2.41
1138 4000 1.903860 TCGTGTAGGTTGGGCTTGTAT 59.096 47.619 0.00 0.00 0.00 2.29
1139 4001 3.098377 TCGTGTAGGTTGGGCTTGTATA 58.902 45.455 0.00 0.00 0.00 1.47
1140 4002 3.707611 TCGTGTAGGTTGGGCTTGTATAT 59.292 43.478 0.00 0.00 0.00 0.86
1141 4003 4.162698 TCGTGTAGGTTGGGCTTGTATATT 59.837 41.667 0.00 0.00 0.00 1.28
1142 4004 4.272504 CGTGTAGGTTGGGCTTGTATATTG 59.727 45.833 0.00 0.00 0.00 1.90
1143 4005 5.433526 GTGTAGGTTGGGCTTGTATATTGA 58.566 41.667 0.00 0.00 0.00 2.57
1144 4006 5.883673 GTGTAGGTTGGGCTTGTATATTGAA 59.116 40.000 0.00 0.00 0.00 2.69
1145 4007 5.883673 TGTAGGTTGGGCTTGTATATTGAAC 59.116 40.000 0.00 0.00 0.00 3.18
1146 4008 4.278310 AGGTTGGGCTTGTATATTGAACC 58.722 43.478 0.00 0.00 33.26 3.62
1147 4009 4.020543 GGTTGGGCTTGTATATTGAACCA 58.979 43.478 0.00 0.00 33.30 3.67
1148 4010 4.142249 GGTTGGGCTTGTATATTGAACCAC 60.142 45.833 0.00 0.00 33.30 4.16
1149 4011 4.308526 TGGGCTTGTATATTGAACCACA 57.691 40.909 0.00 0.00 0.00 4.17
1150 4012 4.667573 TGGGCTTGTATATTGAACCACAA 58.332 39.130 0.00 0.00 42.95 3.33
1151 4013 4.704540 TGGGCTTGTATATTGAACCACAAG 59.295 41.667 8.74 8.74 46.78 3.16
1152 4014 4.705023 GGGCTTGTATATTGAACCACAAGT 59.295 41.667 12.92 0.00 46.12 3.16
1153 4015 5.185056 GGGCTTGTATATTGAACCACAAGTT 59.815 40.000 12.92 0.00 46.12 2.66
1154 4016 6.295067 GGGCTTGTATATTGAACCACAAGTTT 60.295 38.462 12.92 0.00 46.12 2.66
1155 4017 7.094118 GGGCTTGTATATTGAACCACAAGTTTA 60.094 37.037 12.92 0.00 46.12 2.01
1156 4018 7.753580 GGCTTGTATATTGAACCACAAGTTTAC 59.246 37.037 12.92 0.60 46.12 2.01
1157 4019 7.480542 GCTTGTATATTGAACCACAAGTTTACG 59.519 37.037 12.92 0.00 46.12 3.18
1158 4020 7.966246 TGTATATTGAACCACAAGTTTACGT 57.034 32.000 0.00 0.00 42.02 3.57
1159 4021 7.798801 TGTATATTGAACCACAAGTTTACGTG 58.201 34.615 0.00 0.00 42.02 4.49
1160 4022 6.870971 ATATTGAACCACAAGTTTACGTGT 57.129 33.333 0.00 0.00 42.02 4.49
1161 4023 7.966246 ATATTGAACCACAAGTTTACGTGTA 57.034 32.000 0.00 0.00 42.02 2.90
1162 4024 6.680874 ATTGAACCACAAGTTTACGTGTAA 57.319 33.333 0.00 0.00 42.02 2.41
1163 4025 5.467902 TGAACCACAAGTTTACGTGTAAC 57.532 39.130 0.00 2.51 39.40 2.50
1174 4036 3.116531 GTGTAACGGCCCGCTCAC 61.117 66.667 1.23 6.62 0.00 3.51
1175 4037 3.307906 TGTAACGGCCCGCTCACT 61.308 61.111 1.23 0.00 0.00 3.41
1176 4038 1.978080 TGTAACGGCCCGCTCACTA 60.978 57.895 1.23 0.00 0.00 2.74
1177 4039 1.226888 GTAACGGCCCGCTCACTAG 60.227 63.158 1.23 0.00 0.00 2.57
1178 4040 1.679977 TAACGGCCCGCTCACTAGT 60.680 57.895 1.23 0.00 0.00 2.57
1179 4041 1.660560 TAACGGCCCGCTCACTAGTC 61.661 60.000 1.23 0.00 0.00 2.59
1180 4042 3.449227 CGGCCCGCTCACTAGTCA 61.449 66.667 0.00 0.00 0.00 3.41
1181 4043 2.184579 GGCCCGCTCACTAGTCAC 59.815 66.667 0.00 0.00 0.00 3.67
1182 4044 2.352032 GGCCCGCTCACTAGTCACT 61.352 63.158 0.00 0.00 0.00 3.41
1183 4045 1.153745 GCCCGCTCACTAGTCACTG 60.154 63.158 0.00 0.00 0.00 3.66
1689 4551 2.073816 GTAAGTCCCACAATCACCACG 58.926 52.381 0.00 0.00 0.00 4.94
1717 4579 8.421002 AGCATTTGAGCGGGTTATTTTATTTAT 58.579 29.630 0.00 0.00 40.15 1.40
1757 4619 7.041721 AGCTTTAACTTCCCTTCTTTGTTTTG 58.958 34.615 0.00 0.00 0.00 2.44
1759 4621 7.010183 GCTTTAACTTCCCTTCTTTGTTTTGAC 59.990 37.037 0.00 0.00 0.00 3.18
1760 4622 5.993748 AACTTCCCTTCTTTGTTTTGACA 57.006 34.783 0.00 0.00 0.00 3.58
1761 4623 5.993748 ACTTCCCTTCTTTGTTTTGACAA 57.006 34.783 0.00 0.00 0.00 3.18
1766 4628 5.596361 TCCCTTCTTTGTTTTGACAATAGCA 59.404 36.000 0.00 0.00 0.00 3.49
1789 4651 6.564328 CAAAGTGATAAAGGATTTGCTACCC 58.436 40.000 0.00 0.00 39.63 3.69
1845 4707 0.108898 CCACACCTTCAGAGCTCTCG 60.109 60.000 14.96 9.98 34.09 4.04
1855 4717 2.159324 TCAGAGCTCTCGTGTTATGCTG 60.159 50.000 14.96 0.00 33.83 4.41
1856 4718 2.095461 AGAGCTCTCGTGTTATGCTGA 58.905 47.619 11.45 0.00 33.83 4.26
1857 4719 2.098934 AGAGCTCTCGTGTTATGCTGAG 59.901 50.000 11.45 0.00 33.83 3.35
1877 4771 6.698008 TGAGGTTAATTTAGTGATGCCATG 57.302 37.500 0.00 0.00 0.00 3.66
1880 4774 5.594317 AGGTTAATTTAGTGATGCCATGTCC 59.406 40.000 0.00 0.00 0.00 4.02
1882 4776 6.127479 GGTTAATTTAGTGATGCCATGTCCAA 60.127 38.462 0.00 0.00 0.00 3.53
1884 4778 4.987408 TTTAGTGATGCCATGTCCAATG 57.013 40.909 0.00 0.00 0.00 2.82
1938 4832 6.311200 GGAAATCATTTGTTCTTGCCACATAC 59.689 38.462 0.00 0.00 0.00 2.39
1939 4833 6.594788 AATCATTTGTTCTTGCCACATACT 57.405 33.333 0.00 0.00 0.00 2.12
1940 4834 5.627499 TCATTTGTTCTTGCCACATACTC 57.373 39.130 0.00 0.00 0.00 2.59
1941 4835 4.458989 TCATTTGTTCTTGCCACATACTCC 59.541 41.667 0.00 0.00 0.00 3.85
1942 4836 2.489938 TGTTCTTGCCACATACTCCC 57.510 50.000 0.00 0.00 0.00 4.30
1943 4837 1.985159 TGTTCTTGCCACATACTCCCT 59.015 47.619 0.00 0.00 0.00 4.20
1944 4838 2.027192 TGTTCTTGCCACATACTCCCTC 60.027 50.000 0.00 0.00 0.00 4.30
1945 4839 0.824109 TCTTGCCACATACTCCCTCG 59.176 55.000 0.00 0.00 0.00 4.63
1946 4840 0.179073 CTTGCCACATACTCCCTCGG 60.179 60.000 0.00 0.00 0.00 4.63
1947 4841 0.907704 TTGCCACATACTCCCTCGGT 60.908 55.000 0.00 0.00 0.00 4.69
1948 4842 1.327690 TGCCACATACTCCCTCGGTC 61.328 60.000 0.00 0.00 0.00 4.79
1949 4843 2.029307 GCCACATACTCCCTCGGTCC 62.029 65.000 0.00 0.00 0.00 4.46
1950 4844 1.400530 CCACATACTCCCTCGGTCCC 61.401 65.000 0.00 0.00 0.00 4.46
1951 4845 0.686441 CACATACTCCCTCGGTCCCA 60.686 60.000 0.00 0.00 0.00 4.37
1952 4846 0.042131 ACATACTCCCTCGGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
1953 4847 1.200519 CATACTCCCTCGGTCCCAAA 58.799 55.000 0.00 0.00 0.00 3.28
1954 4848 1.557832 CATACTCCCTCGGTCCCAAAA 59.442 52.381 0.00 0.00 0.00 2.44
1955 4849 1.961133 TACTCCCTCGGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1956 4850 1.961133 ACTCCCTCGGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1957 4851 2.271777 ACTCCCTCGGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1958 4852 2.238898 ACTCCCTCGGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1962 4856 3.007635 CCTCGGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1965 4859 2.433436 GGTCCCAAAATAAGTGTCGCT 58.567 47.619 0.00 0.00 0.00 4.93
1966 4860 2.161609 GGTCCCAAAATAAGTGTCGCTG 59.838 50.000 0.00 0.00 0.00 5.18
1967 4861 3.071479 GTCCCAAAATAAGTGTCGCTGA 58.929 45.455 0.00 0.00 0.00 4.26
1970 4864 3.502211 CCCAAAATAAGTGTCGCTGAGTT 59.498 43.478 0.00 0.00 0.00 3.01
1971 4865 4.693566 CCCAAAATAAGTGTCGCTGAGTTA 59.306 41.667 0.00 0.00 0.00 2.24
1972 4866 5.163854 CCCAAAATAAGTGTCGCTGAGTTAG 60.164 44.000 0.00 0.00 0.00 2.34
1973 4867 5.408604 CCAAAATAAGTGTCGCTGAGTTAGT 59.591 40.000 0.00 0.00 0.00 2.24
1974 4868 6.588756 CCAAAATAAGTGTCGCTGAGTTAGTA 59.411 38.462 0.00 0.00 0.00 1.82
1975 4869 7.201444 CCAAAATAAGTGTCGCTGAGTTAGTAG 60.201 40.741 0.00 0.00 0.00 2.57
1981 4875 3.418675 GCTGAGTTAGTAGCGCACA 57.581 52.632 11.47 0.00 0.00 4.57
1983 4877 1.855360 GCTGAGTTAGTAGCGCACATC 59.145 52.381 11.47 4.26 0.00 3.06
1984 4878 2.480416 GCTGAGTTAGTAGCGCACATCT 60.480 50.000 11.47 4.48 0.00 2.90
1986 4880 3.511699 TGAGTTAGTAGCGCACATCTTG 58.488 45.455 11.47 0.00 0.00 3.02
1987 4881 3.056821 TGAGTTAGTAGCGCACATCTTGT 60.057 43.478 11.47 0.00 0.00 3.16
1988 4882 4.157105 TGAGTTAGTAGCGCACATCTTGTA 59.843 41.667 11.47 0.00 0.00 2.41
1992 4886 1.324736 GTAGCGCACATCTTGTAGCAC 59.675 52.381 11.47 3.68 36.22 4.40
1993 4887 1.021390 AGCGCACATCTTGTAGCACC 61.021 55.000 11.47 0.00 36.22 5.01
1994 4888 1.021390 GCGCACATCTTGTAGCACCT 61.021 55.000 0.30 0.00 34.68 4.00
1995 4889 1.002366 CGCACATCTTGTAGCACCTC 58.998 55.000 0.00 0.00 0.00 3.85
2028 5035 9.517609 AGAGAAAACGCTATACTGTATGTAAAG 57.482 33.333 10.51 1.22 34.45 1.85
2035 5042 6.513180 GCTATACTGTATGTAAAGTGCAGGA 58.487 40.000 10.51 0.00 34.18 3.86
2052 5059 0.853419 GGAGCTTAGCAATCGCGTAC 59.147 55.000 5.77 0.00 45.49 3.67
2053 5060 0.498927 GAGCTTAGCAATCGCGTACG 59.501 55.000 11.84 11.84 45.49 3.67
2054 5061 1.084227 GCTTAGCAATCGCGTACGC 60.084 57.895 29.83 29.83 45.49 4.42
2067 5074 1.727213 GCGTACGCGTAGGTCATATCC 60.727 57.143 32.02 15.31 40.81 2.59
2073 5080 5.464030 ACGCGTAGGTCATATCCTTAAAT 57.536 39.130 11.67 0.00 38.86 1.40
2076 5083 7.436118 ACGCGTAGGTCATATCCTTAAATAAA 58.564 34.615 11.67 0.00 38.86 1.40
2077 5084 7.927629 ACGCGTAGGTCATATCCTTAAATAAAA 59.072 33.333 11.67 0.00 38.86 1.52
2108 5115 5.753721 ATTAAGGGGCTAATTTTGTTGCA 57.246 34.783 0.00 0.00 0.00 4.08
2112 5119 3.009026 GGGGCTAATTTTGTTGCATTGG 58.991 45.455 0.00 0.00 0.00 3.16
2130 5137 3.903783 TGCTTGATTAGGCACCGC 58.096 55.556 0.00 0.00 33.23 5.68
2131 5138 1.299648 TGCTTGATTAGGCACCGCT 59.700 52.632 0.00 0.00 33.23 5.52
2132 5139 1.026182 TGCTTGATTAGGCACCGCTG 61.026 55.000 0.00 0.00 33.23 5.18
2133 5140 1.723870 CTTGATTAGGCACCGCTGC 59.276 57.895 0.00 0.00 43.41 5.25
2134 5141 0.745845 CTTGATTAGGCACCGCTGCT 60.746 55.000 2.19 0.00 43.66 4.24
2139 5146 0.323629 TTAGGCACCGCTGCTTAACT 59.676 50.000 3.38 0.00 39.38 2.24
2153 5160 6.455646 CGCTGCTTAACTTTATCTGGTACTTG 60.456 42.308 0.00 0.00 0.00 3.16
2169 5176 8.577296 TCTGGTACTTGTGCATATAACTATCTC 58.423 37.037 0.00 0.00 0.00 2.75
2204 5211 2.054232 ACGACCATCTCGACACCTAT 57.946 50.000 0.00 0.00 46.14 2.57
2232 5239 9.125026 AGAGGTAATTGTATTGGCTTTATTCAG 57.875 33.333 0.00 0.00 0.00 3.02
2241 5248 4.134379 TGGCTTTATTCAGCTCTCTCAG 57.866 45.455 0.00 0.00 39.97 3.35
2242 5249 3.517100 TGGCTTTATTCAGCTCTCTCAGT 59.483 43.478 0.00 0.00 39.97 3.41
2274 5281 5.052693 TCTGCCTCAACATATGGCTAATT 57.947 39.130 7.80 0.00 46.23 1.40
2281 5288 7.383300 GCCTCAACATATGGCTAATTGAATTTC 59.617 37.037 7.80 0.00 43.05 2.17
2292 5299 7.548780 TGGCTAATTGAATTTCTTTGGTAATGC 59.451 33.333 0.00 0.00 0.00 3.56
2304 5313 6.999950 TCTTTGGTAATGCTACTACTGTTCA 58.000 36.000 0.00 0.00 0.00 3.18
2320 5329 5.433526 ACTGTTCAGCTGTACCACTTAAAA 58.566 37.500 19.36 0.00 0.00 1.52
2324 5333 6.770785 TGTTCAGCTGTACCACTTAAAATTCT 59.229 34.615 19.36 0.00 0.00 2.40
2325 5334 6.801539 TCAGCTGTACCACTTAAAATTCTG 57.198 37.500 14.67 0.00 0.00 3.02
2326 5335 6.296026 TCAGCTGTACCACTTAAAATTCTGT 58.704 36.000 14.67 0.00 0.00 3.41
2327 5336 6.770785 TCAGCTGTACCACTTAAAATTCTGTT 59.229 34.615 14.67 0.00 0.00 3.16
2328 5337 7.934665 TCAGCTGTACCACTTAAAATTCTGTTA 59.065 33.333 14.67 0.00 0.00 2.41
2330 5339 8.784043 AGCTGTACCACTTAAAATTCTGTTAAG 58.216 33.333 6.59 6.59 42.03 1.85
2339 5348 9.476202 ACTTAAAATTCTGTTAAGTGGAAATGC 57.524 29.630 11.29 0.00 45.58 3.56
2343 5352 8.409358 AAATTCTGTTAAGTGGAAATGCTACT 57.591 30.769 0.00 0.00 40.42 2.57
2344 5353 9.515226 AAATTCTGTTAAGTGGAAATGCTACTA 57.485 29.630 0.00 0.00 37.33 1.82
2345 5354 7.900782 TTCTGTTAAGTGGAAATGCTACTAC 57.099 36.000 0.00 0.00 37.33 2.73
2347 5356 7.097192 TCTGTTAAGTGGAAATGCTACTACTG 58.903 38.462 0.00 0.00 37.33 2.74
2349 5358 3.268023 AGTGGAAATGCTACTACTGCC 57.732 47.619 0.00 0.00 36.45 4.85
2350 5359 2.571653 AGTGGAAATGCTACTACTGCCA 59.428 45.455 0.00 0.00 36.45 4.92
2351 5360 2.678336 GTGGAAATGCTACTACTGCCAC 59.322 50.000 0.00 0.00 37.91 5.01
2353 5362 3.009033 TGGAAATGCTACTACTGCCACTT 59.991 43.478 0.00 0.00 0.00 3.16
2354 5363 4.010349 GGAAATGCTACTACTGCCACTTT 58.990 43.478 0.00 0.00 0.00 2.66
2355 5364 4.142600 GGAAATGCTACTACTGCCACTTTG 60.143 45.833 0.00 0.00 0.00 2.77
2356 5365 3.981071 ATGCTACTACTGCCACTTTGA 57.019 42.857 0.00 0.00 0.00 2.69
2357 5366 3.981071 TGCTACTACTGCCACTTTGAT 57.019 42.857 0.00 0.00 0.00 2.57
2359 5368 5.414789 TGCTACTACTGCCACTTTGATTA 57.585 39.130 0.00 0.00 0.00 1.75
2360 5369 5.989477 TGCTACTACTGCCACTTTGATTAT 58.011 37.500 0.00 0.00 0.00 1.28
2361 5370 6.414732 TGCTACTACTGCCACTTTGATTATT 58.585 36.000 0.00 0.00 0.00 1.40
2362 5371 6.884295 TGCTACTACTGCCACTTTGATTATTT 59.116 34.615 0.00 0.00 0.00 1.40
2363 5372 8.044309 TGCTACTACTGCCACTTTGATTATTTA 58.956 33.333 0.00 0.00 0.00 1.40
2367 5376 9.243105 ACTACTGCCACTTTGATTATTTATTGT 57.757 29.630 0.00 0.00 0.00 2.71
2392 5418 3.934457 TCTGATAGCGAGTTGTGTGAA 57.066 42.857 0.00 0.00 0.00 3.18
2397 5423 7.363431 TCTGATAGCGAGTTGTGTGAATATAG 58.637 38.462 0.00 0.00 0.00 1.31
2408 5434 7.499232 AGTTGTGTGAATATAGCTATTTGTCCC 59.501 37.037 12.39 0.00 0.00 4.46
2511 5537 4.706962 GGATACTGGAAGCCAAGTTTGATT 59.293 41.667 0.00 0.00 37.60 2.57
2580 5606 1.349357 GAGAAAGGGGTGAGCAGTTCT 59.651 52.381 0.00 0.00 0.00 3.01
2602 5628 3.353370 TCATGATCTTGTGCATCACCA 57.647 42.857 8.33 0.00 33.04 4.17
2626 5652 5.190528 AGCTCTCTGTTAATGATCTTTCCCA 59.809 40.000 0.00 0.00 0.00 4.37
2632 5658 9.790344 CTCTGTTAATGATCTTTCCCATATTCT 57.210 33.333 0.00 0.00 0.00 2.40
2680 5706 4.081406 TCAAAACTTCCTGCATGCTGTAT 58.919 39.130 20.33 0.44 0.00 2.29
2681 5707 4.082625 TCAAAACTTCCTGCATGCTGTATG 60.083 41.667 20.33 10.14 39.88 2.39
2711 5738 6.767423 AGCAGATTTTATTGCCTTTGTTGTTT 59.233 30.769 0.00 0.00 41.17 2.83
2757 5784 9.507280 CCTAGCTAATTGTTTGTTATGAACATG 57.493 33.333 0.00 0.00 41.79 3.21
2810 5837 2.165437 TCTTTTAAATGCCCGCATGTCC 59.835 45.455 2.31 0.00 36.68 4.02
2873 5900 4.320421 CCATTAGTCTCTCTGATGCTCTCG 60.320 50.000 0.00 0.00 38.37 4.04
2920 5947 8.927411 ACTGGTAAGTAACAGTAGAGGTTTAAA 58.073 33.333 7.25 0.00 45.45 1.52
2990 6017 1.278985 CTGGTGCAGAGTACCATCCAA 59.721 52.381 7.41 0.00 46.41 3.53
3024 6051 0.036765 GTTGCTCCATACACCACCGA 60.037 55.000 0.00 0.00 0.00 4.69
3065 6092 9.685828 GCTGGCGATTTAAAATATGGTATTTTA 57.314 29.630 9.61 9.61 33.73 1.52
3110 6144 9.694520 CTAGTCATTCATTGTTTTGAGAATACG 57.305 33.333 0.00 0.00 0.00 3.06
3148 6182 2.819608 TGAGTGGCACAATTCTAAAGGC 59.180 45.455 21.41 0.00 44.16 4.35
3189 6223 4.392940 AGATGACCCTGTTCAAAAGTGAG 58.607 43.478 0.00 0.00 34.49 3.51
3280 6314 2.703416 ACAATCAAAGATCTGCAGCGA 58.297 42.857 9.47 0.00 0.00 4.93
3317 6351 1.309950 CATCTGGATGGCAGCTTCAG 58.690 55.000 1.50 2.42 35.24 3.02
3347 6381 2.338500 GTGAAGAGGAAGGTAAGCACG 58.662 52.381 0.00 0.00 0.00 5.34
4076 7115 3.617263 CGCTACTTTTAATTCTCGTGCCT 59.383 43.478 0.00 0.00 0.00 4.75
4262 7301 6.936968 AGTAGTTTTAGACATTGACCCTCT 57.063 37.500 0.00 0.00 0.00 3.69
4404 7444 5.116084 TGCTACCAGCTCTTTTCCATAAT 57.884 39.130 0.00 0.00 42.97 1.28
4569 7611 8.309656 GGAGTTACTGTGTTTACTGTATAAGGT 58.690 37.037 0.00 0.00 39.81 3.50
4641 7683 8.854117 AGTTTTTCTAAAGCATGAAGAACAGAT 58.146 29.630 0.00 0.00 38.74 2.90
4650 7692 4.260132 GCATGAAGAACAGATAACTGAGCG 60.260 45.833 7.05 0.00 46.03 5.03
4757 7803 7.096599 GCCTCTCGTTCTTTATGAAAAACAAAC 60.097 37.037 0.00 0.00 36.30 2.93
4758 7804 7.913297 CCTCTCGTTCTTTATGAAAAACAAACA 59.087 33.333 0.00 0.00 36.30 2.83
4759 7805 9.284594 CTCTCGTTCTTTATGAAAAACAAACAA 57.715 29.630 0.00 0.00 36.30 2.83
4760 7806 9.627395 TCTCGTTCTTTATGAAAAACAAACAAA 57.373 25.926 0.00 0.00 36.30 2.83
5010 8143 4.275936 GTGTAATCCCTCCATCGGAAAATG 59.724 45.833 0.00 0.00 31.75 2.32
5280 8413 6.703607 CCAAATCAGAGCGTATAGAGTTTGAT 59.296 38.462 0.00 0.00 0.00 2.57
5397 8530 4.638865 ACAAGTTGTTCTGTAACTTCCCAC 59.361 41.667 1.64 0.00 44.20 4.61
5470 8603 6.810182 GCATTGTTTATTGAATGACTTGCTCT 59.190 34.615 0.00 0.00 32.24 4.09
5512 8645 2.604046 AGGGTAGTTCGATCATGCAC 57.396 50.000 0.00 0.00 0.00 4.57
5544 8677 5.767816 TTCTTGGTTGGCTTTCTTTCTAC 57.232 39.130 0.00 0.00 0.00 2.59
5548 8681 4.787551 TGGTTGGCTTTCTTTCTACTTCA 58.212 39.130 0.00 0.00 0.00 3.02
5550 8683 4.216472 GGTTGGCTTTCTTTCTACTTCAGG 59.784 45.833 0.00 0.00 0.00 3.86
5551 8684 4.021102 TGGCTTTCTTTCTACTTCAGGG 57.979 45.455 0.00 0.00 0.00 4.45
5564 8794 7.510675 TCTACTTCAGGGATTTGTTAGGAAT 57.489 36.000 0.00 0.00 0.00 3.01
5594 8827 8.296179 TATTAATGCTTAATGGGGTGAAAGCCA 61.296 37.037 0.00 0.00 45.14 4.75
5617 8851 3.476552 TGACTGTTCTTTAGGCACAAGG 58.523 45.455 0.00 0.00 0.00 3.61
5622 8856 5.163237 ACTGTTCTTTAGGCACAAGGTCTTA 60.163 40.000 0.00 0.00 30.82 2.10
5623 8857 5.061179 TGTTCTTTAGGCACAAGGTCTTAC 58.939 41.667 0.00 0.00 30.82 2.34
5653 8890 5.819825 CCTATTGAAGGCTGGTCTTTTAC 57.180 43.478 0.00 0.00 38.97 2.01
5654 8891 5.501156 CCTATTGAAGGCTGGTCTTTTACT 58.499 41.667 0.00 0.00 38.97 2.24
5656 8893 6.434340 CCTATTGAAGGCTGGTCTTTTACTTT 59.566 38.462 0.00 0.00 38.97 2.66
5657 8894 6.731292 ATTGAAGGCTGGTCTTTTACTTTT 57.269 33.333 0.00 0.00 0.00 2.27
5658 8895 5.767816 TGAAGGCTGGTCTTTTACTTTTC 57.232 39.130 0.00 0.00 0.00 2.29
5660 8897 4.455070 AGGCTGGTCTTTTACTTTTCCT 57.545 40.909 0.00 0.00 0.00 3.36
5662 8899 3.506455 GGCTGGTCTTTTACTTTTCCTCC 59.494 47.826 0.00 0.00 0.00 4.30
5664 8901 4.725490 CTGGTCTTTTACTTTTCCTCCCA 58.275 43.478 0.00 0.00 0.00 4.37
5665 8902 5.325239 CTGGTCTTTTACTTTTCCTCCCAT 58.675 41.667 0.00 0.00 0.00 4.00
5674 8913 8.631480 TTTACTTTTCCTCCCATTCTAGAAAC 57.369 34.615 9.71 0.00 0.00 2.78
5687 8926 3.282021 TCTAGAAACCTGATGCCAATGC 58.718 45.455 0.00 0.00 38.26 3.56
5718 8957 2.042464 TGACAGGAGAAGCTGAACTGT 58.958 47.619 11.83 11.83 44.34 3.55
5856 9095 1.949847 CTCCAGGTTCGCCATCGACT 61.950 60.000 0.00 0.00 45.43 4.18
5886 9125 8.029642 ACAGAAACGTGGAATAGTTGATTAAG 57.970 34.615 0.00 0.00 0.00 1.85
5887 9126 6.961554 CAGAAACGTGGAATAGTTGATTAAGC 59.038 38.462 0.00 0.00 0.00 3.09
5888 9127 5.813080 AACGTGGAATAGTTGATTAAGCC 57.187 39.130 0.00 0.00 0.00 4.35
5889 9128 5.099042 ACGTGGAATAGTTGATTAAGCCT 57.901 39.130 0.00 0.00 0.00 4.58
5890 9129 6.229936 ACGTGGAATAGTTGATTAAGCCTA 57.770 37.500 0.00 0.00 0.00 3.93
5891 9130 6.827727 ACGTGGAATAGTTGATTAAGCCTAT 58.172 36.000 0.00 0.00 0.00 2.57
5924 9164 3.557508 CAGTGTGTGTGCATGTAACATG 58.442 45.455 6.64 0.00 0.00 3.21
5928 9168 3.236816 GTGTGTGCATGTAACATGCTTC 58.763 45.455 22.31 17.35 44.79 3.86
5948 9190 7.112122 TGCTTCTTTACTGATGATACCAACAT 58.888 34.615 0.00 0.00 0.00 2.71
6000 9242 1.076906 AGGGACTGCCTCAGTACGT 59.923 57.895 3.38 0.00 45.62 3.57
6013 9265 1.105759 AGTACGTATGGCGACCCTCC 61.106 60.000 0.00 0.00 44.77 4.30
6075 9328 7.444299 ACCTGTTTTGCAGTTTTCATATGATT 58.556 30.769 6.17 0.00 43.55 2.57
6153 9409 2.337359 TAGGCAACCCAACTAGTCCT 57.663 50.000 0.00 0.00 37.17 3.85
6154 9410 0.693049 AGGCAACCCAACTAGTCCTG 59.307 55.000 0.00 0.00 37.17 3.86
6164 9421 0.244994 ACTAGTCCTGCAGTCGCTTG 59.755 55.000 13.81 10.46 39.64 4.01
6200 9457 6.318900 GGAACAGTATCCCAATCCTAGTTTTG 59.681 42.308 0.00 0.00 33.05 2.44
6214 9471 7.223260 TCCTAGTTTTGTCTATTCTGTTCGA 57.777 36.000 0.00 0.00 0.00 3.71
6231 9488 7.054751 TCTGTTCGATTTACTCCTATCTCAGA 58.945 38.462 0.00 0.00 0.00 3.27
6244 9501 8.548877 ACTCCTATCTCAGAGATCTAGTATTCC 58.451 40.741 16.70 0.00 36.20 3.01
6245 9502 7.867921 TCCTATCTCAGAGATCTAGTATTCCC 58.132 42.308 16.70 0.00 36.20 3.97
6246 9503 7.686790 TCCTATCTCAGAGATCTAGTATTCCCT 59.313 40.741 16.70 0.00 36.20 4.20
6247 9504 7.993183 CCTATCTCAGAGATCTAGTATTCCCTC 59.007 44.444 16.70 0.00 36.20 4.30
6248 9505 6.134535 TCTCAGAGATCTAGTATTCCCTCC 57.865 45.833 0.00 0.00 0.00 4.30
6249 9506 5.613116 TCTCAGAGATCTAGTATTCCCTCCA 59.387 44.000 0.00 0.00 0.00 3.86
6250 9507 6.103353 TCTCAGAGATCTAGTATTCCCTCCAA 59.897 42.308 0.00 0.00 0.00 3.53
6251 9508 6.868826 TCAGAGATCTAGTATTCCCTCCAAT 58.131 40.000 0.00 0.00 0.00 3.16
6252 9509 6.951198 TCAGAGATCTAGTATTCCCTCCAATC 59.049 42.308 0.00 0.00 0.00 2.67
6253 9510 6.154363 CAGAGATCTAGTATTCCCTCCAATCC 59.846 46.154 0.00 0.00 0.00 3.01
6254 9511 5.982391 AGATCTAGTATTCCCTCCAATCCA 58.018 41.667 0.00 0.00 0.00 3.41
6255 9512 6.393897 AGATCTAGTATTCCCTCCAATCCAA 58.606 40.000 0.00 0.00 0.00 3.53
6256 9513 6.851836 AGATCTAGTATTCCCTCCAATCCAAA 59.148 38.462 0.00 0.00 0.00 3.28
6257 9514 7.519004 AGATCTAGTATTCCCTCCAATCCAAAT 59.481 37.037 0.00 0.00 0.00 2.32
6258 9515 7.465900 TCTAGTATTCCCTCCAATCCAAATT 57.534 36.000 0.00 0.00 0.00 1.82
6259 9516 8.575736 TCTAGTATTCCCTCCAATCCAAATTA 57.424 34.615 0.00 0.00 0.00 1.40
6260 9517 9.009675 TCTAGTATTCCCTCCAATCCAAATTAA 57.990 33.333 0.00 0.00 0.00 1.40
6261 9518 9.813826 CTAGTATTCCCTCCAATCCAAATTAAT 57.186 33.333 0.00 0.00 0.00 1.40
6263 9520 8.927411 AGTATTCCCTCCAATCCAAATTAATTG 58.073 33.333 0.39 0.00 38.84 2.32
6264 9521 7.754091 ATTCCCTCCAATCCAAATTAATTGT 57.246 32.000 0.39 0.00 37.32 2.71
6265 9522 6.790232 TCCCTCCAATCCAAATTAATTGTC 57.210 37.500 0.39 0.00 37.32 3.18
6266 9523 6.259893 TCCCTCCAATCCAAATTAATTGTCA 58.740 36.000 0.39 0.00 37.32 3.58
6267 9524 6.154363 TCCCTCCAATCCAAATTAATTGTCAC 59.846 38.462 0.39 0.00 37.32 3.67
6268 9525 6.035843 CCTCCAATCCAAATTAATTGTCACG 58.964 40.000 0.39 0.00 37.32 4.35
6269 9526 5.960113 TCCAATCCAAATTAATTGTCACGG 58.040 37.500 0.39 0.00 37.32 4.94
6270 9527 4.566360 CCAATCCAAATTAATTGTCACGGC 59.434 41.667 0.39 0.00 37.32 5.68
6271 9528 5.410067 CAATCCAAATTAATTGTCACGGCT 58.590 37.500 0.39 0.00 37.32 5.52
6272 9529 5.659440 ATCCAAATTAATTGTCACGGCTT 57.341 34.783 0.39 0.00 37.32 4.35
6273 9530 5.461032 TCCAAATTAATTGTCACGGCTTT 57.539 34.783 0.39 0.00 37.32 3.51
6274 9531 6.576662 TCCAAATTAATTGTCACGGCTTTA 57.423 33.333 0.39 0.00 37.32 1.85
6275 9532 6.616947 TCCAAATTAATTGTCACGGCTTTAG 58.383 36.000 0.39 0.00 37.32 1.85
6276 9533 6.207810 TCCAAATTAATTGTCACGGCTTTAGT 59.792 34.615 0.39 0.00 37.32 2.24
6277 9534 7.390996 TCCAAATTAATTGTCACGGCTTTAGTA 59.609 33.333 0.39 0.00 37.32 1.82
6278 9535 7.483691 CCAAATTAATTGTCACGGCTTTAGTAC 59.516 37.037 0.39 0.00 37.32 2.73
6279 9536 7.675962 AATTAATTGTCACGGCTTTAGTACA 57.324 32.000 0.00 0.00 0.00 2.90
6280 9537 7.675962 ATTAATTGTCACGGCTTTAGTACAA 57.324 32.000 0.00 0.00 0.00 2.41
6281 9538 5.352643 AATTGTCACGGCTTTAGTACAAC 57.647 39.130 0.00 0.00 30.40 3.32
6282 9539 3.738830 TGTCACGGCTTTAGTACAACT 57.261 42.857 0.00 0.00 0.00 3.16
6283 9540 4.062677 TGTCACGGCTTTAGTACAACTT 57.937 40.909 0.00 0.00 0.00 2.66
6284 9541 5.199024 TGTCACGGCTTTAGTACAACTTA 57.801 39.130 0.00 0.00 0.00 2.24
6285 9542 5.599732 TGTCACGGCTTTAGTACAACTTAA 58.400 37.500 0.00 0.00 0.00 1.85
6312 9569 3.524095 TCTGGAAAATTCTTCTGGGCA 57.476 42.857 0.00 0.00 0.00 5.36
6321 9671 7.147846 GGAAAATTCTTCTGGGCATAGATTTCA 60.148 37.037 12.16 0.00 29.03 2.69
6355 9705 2.178912 TTTAGTTCAGGAAGGTGGCG 57.821 50.000 0.00 0.00 0.00 5.69
6389 9739 8.043113 AGTTAACTGCACATGATTGATCTTCTA 58.957 33.333 7.48 0.00 0.00 2.10
6395 9745 5.562307 GCACATGATTGATCTTCTACCATGC 60.562 44.000 0.00 0.00 34.84 4.06
6421 9783 2.485814 GAGCATGACCTTTGTCCTTGTC 59.514 50.000 0.00 0.00 41.01 3.18
6448 9815 3.275999 ACTTTATTGGTGGCATCGTACC 58.724 45.455 0.00 0.00 37.48 3.34
6458 9825 1.927210 CATCGTACCATCGTGCAGC 59.073 57.895 0.00 0.00 0.00 5.25
6493 9860 1.063469 GGAATGGCAAACGTATGACCG 59.937 52.381 0.00 0.00 0.00 4.79
6500 9867 0.734942 AAACGTATGACCGGTCTGCG 60.735 55.000 33.39 31.16 0.00 5.18
6598 9965 1.080569 GCAAGGCCAACATGTTCCG 60.081 57.895 8.48 2.85 0.00 4.30
6629 9996 1.946984 TTAATCCAGTCACCCGTCCT 58.053 50.000 0.00 0.00 0.00 3.85
6708 10076 4.439563 CGTCACCTTTTGGCTTACTTGTTT 60.440 41.667 0.00 0.00 45.59 2.83
6709 10077 4.803613 GTCACCTTTTGGCTTACTTGTTTG 59.196 41.667 0.00 0.00 45.59 2.93
6710 10078 4.464597 TCACCTTTTGGCTTACTTGTTTGT 59.535 37.500 0.00 0.00 45.59 2.83
6713 10081 5.872617 ACCTTTTGGCTTACTTGTTTGTTTC 59.127 36.000 0.00 0.00 45.59 2.78
6766 10140 5.067153 TGTTGGATTCAGTTTCATTGTTCGT 59.933 36.000 0.00 0.00 0.00 3.85
6767 10141 5.107109 TGGATTCAGTTTCATTGTTCGTG 57.893 39.130 0.00 0.00 0.00 4.35
6768 10142 4.578516 TGGATTCAGTTTCATTGTTCGTGT 59.421 37.500 0.00 0.00 0.00 4.49
6778 10152 4.710324 TCATTGTTCGTGTTAAACCTCCT 58.290 39.130 0.00 0.00 0.00 3.69
6779 10153 5.856156 TCATTGTTCGTGTTAAACCTCCTA 58.144 37.500 0.00 0.00 0.00 2.94
6780 10154 5.929992 TCATTGTTCGTGTTAAACCTCCTAG 59.070 40.000 0.00 0.00 0.00 3.02
6783 10157 1.551883 TCGTGTTAAACCTCCTAGCCC 59.448 52.381 0.00 0.00 0.00 5.19
6787 10161 1.489649 GTTAAACCTCCTAGCCCTCCC 59.510 57.143 0.00 0.00 0.00 4.30
6788 10162 0.398098 TAAACCTCCTAGCCCTCCCG 60.398 60.000 0.00 0.00 0.00 5.14
6789 10163 2.472607 AAACCTCCTAGCCCTCCCGT 62.473 60.000 0.00 0.00 0.00 5.28
6819 10193 1.485480 GAACTCCTAGCCCTAACACCC 59.515 57.143 0.00 0.00 0.00 4.61
6824 10198 1.622725 CCTAGCCCTAACACCCTGTCT 60.623 57.143 0.00 0.00 0.00 3.41
6826 10200 2.337359 AGCCCTAACACCCTGTCTTA 57.663 50.000 0.00 0.00 0.00 2.10
6845 10219 7.717568 TGTCTTAGGACATCTCTAGCAAATAC 58.282 38.462 3.11 0.00 46.19 1.89
6855 10229 5.978814 TCTCTAGCAAATACCCTGAAACTC 58.021 41.667 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.301716 CTGAGTGTTGACCACCCGG 60.302 63.158 0.00 0.00 45.74 5.73
1 2 1.301716 CCTGAGTGTTGACCACCCG 60.302 63.158 0.00 0.00 45.74 5.28
2 3 0.535102 CACCTGAGTGTTGACCACCC 60.535 60.000 0.00 0.00 45.74 4.61
3 4 0.535102 CCACCTGAGTGTTGACCACC 60.535 60.000 0.00 0.00 45.74 4.61
4 5 1.166531 GCCACCTGAGTGTTGACCAC 61.167 60.000 0.00 0.00 42.88 4.16
5 6 1.148273 GCCACCTGAGTGTTGACCA 59.852 57.895 0.00 0.00 42.88 4.02
6 7 0.465460 TTGCCACCTGAGTGTTGACC 60.465 55.000 0.00 0.00 42.88 4.02
7 8 0.947244 CTTGCCACCTGAGTGTTGAC 59.053 55.000 0.00 0.00 42.88 3.18
8 9 0.179020 CCTTGCCACCTGAGTGTTGA 60.179 55.000 0.00 0.00 42.88 3.18
9 10 0.179020 TCCTTGCCACCTGAGTGTTG 60.179 55.000 0.00 0.00 42.88 3.33
10 11 0.550914 TTCCTTGCCACCTGAGTGTT 59.449 50.000 0.00 0.00 42.88 3.32
11 12 0.109342 CTTCCTTGCCACCTGAGTGT 59.891 55.000 0.00 0.00 42.88 3.55
12 13 0.607489 CCTTCCTTGCCACCTGAGTG 60.607 60.000 0.00 0.00 44.12 3.51
13 14 0.768221 TCCTTCCTTGCCACCTGAGT 60.768 55.000 0.00 0.00 0.00 3.41
14 15 0.322008 GTCCTTCCTTGCCACCTGAG 60.322 60.000 0.00 0.00 0.00 3.35
15 16 1.761174 GTCCTTCCTTGCCACCTGA 59.239 57.895 0.00 0.00 0.00 3.86
16 17 1.303643 GGTCCTTCCTTGCCACCTG 60.304 63.158 0.00 0.00 0.00 4.00
17 18 2.895424 CGGTCCTTCCTTGCCACCT 61.895 63.158 0.00 0.00 0.00 4.00
18 19 2.359975 CGGTCCTTCCTTGCCACC 60.360 66.667 0.00 0.00 0.00 4.61
19 20 1.376037 CTCGGTCCTTCCTTGCCAC 60.376 63.158 0.00 0.00 0.00 5.01
20 21 1.535444 TCTCGGTCCTTCCTTGCCA 60.535 57.895 0.00 0.00 0.00 4.92
21 22 1.219393 CTCTCGGTCCTTCCTTGCC 59.781 63.158 0.00 0.00 0.00 4.52
22 23 1.219393 CCTCTCGGTCCTTCCTTGC 59.781 63.158 0.00 0.00 0.00 4.01
23 24 1.219393 GCCTCTCGGTCCTTCCTTG 59.781 63.158 0.00 0.00 0.00 3.61
24 25 0.836400 TTGCCTCTCGGTCCTTCCTT 60.836 55.000 0.00 0.00 0.00 3.36
25 26 1.229209 TTGCCTCTCGGTCCTTCCT 60.229 57.895 0.00 0.00 0.00 3.36
26 27 1.219393 CTTGCCTCTCGGTCCTTCC 59.781 63.158 0.00 0.00 0.00 3.46
27 28 1.219393 CCTTGCCTCTCGGTCCTTC 59.781 63.158 0.00 0.00 0.00 3.46
28 29 2.294078 CCCTTGCCTCTCGGTCCTT 61.294 63.158 0.00 0.00 0.00 3.36
29 30 2.685380 CCCTTGCCTCTCGGTCCT 60.685 66.667 0.00 0.00 0.00 3.85
30 31 2.291043 TTCCCTTGCCTCTCGGTCC 61.291 63.158 0.00 0.00 0.00 4.46
31 32 1.079057 GTTCCCTTGCCTCTCGGTC 60.079 63.158 0.00 0.00 0.00 4.79
32 33 2.943978 CGTTCCCTTGCCTCTCGGT 61.944 63.158 0.00 0.00 0.00 4.69
33 34 2.125512 CGTTCCCTTGCCTCTCGG 60.126 66.667 0.00 0.00 0.00 4.63
34 35 2.125512 CCGTTCCCTTGCCTCTCG 60.126 66.667 0.00 0.00 0.00 4.04
35 36 2.436824 GCCGTTCCCTTGCCTCTC 60.437 66.667 0.00 0.00 0.00 3.20
36 37 2.529744 AAGCCGTTCCCTTGCCTCT 61.530 57.895 0.00 0.00 0.00 3.69
37 38 2.034221 AAGCCGTTCCCTTGCCTC 59.966 61.111 0.00 0.00 0.00 4.70
38 39 2.282462 CAAGCCGTTCCCTTGCCT 60.282 61.111 0.00 0.00 34.00 4.75
41 42 3.737172 CCGCAAGCCGTTCCCTTG 61.737 66.667 0.00 0.00 41.93 3.61
64 65 2.578981 GTAAGCCTCGTCGACGGC 60.579 66.667 35.05 29.83 46.65 5.68
65 66 0.866061 CATGTAAGCCTCGTCGACGG 60.866 60.000 35.05 24.95 40.29 4.79
66 67 0.866061 CCATGTAAGCCTCGTCGACG 60.866 60.000 31.30 31.30 41.45 5.12
67 68 1.146358 GCCATGTAAGCCTCGTCGAC 61.146 60.000 5.18 5.18 0.00 4.20
68 69 1.141019 GCCATGTAAGCCTCGTCGA 59.859 57.895 0.00 0.00 0.00 4.20
69 70 2.230940 CGCCATGTAAGCCTCGTCG 61.231 63.158 0.00 0.00 0.00 5.12
70 71 1.883084 CCGCCATGTAAGCCTCGTC 60.883 63.158 0.00 0.00 0.00 4.20
71 72 2.186903 CCGCCATGTAAGCCTCGT 59.813 61.111 0.00 0.00 0.00 4.18
72 73 1.883084 GTCCGCCATGTAAGCCTCG 60.883 63.158 0.00 0.00 0.00 4.63
73 74 1.523938 GGTCCGCCATGTAAGCCTC 60.524 63.158 0.00 0.00 34.09 4.70
74 75 1.562672 AAGGTCCGCCATGTAAGCCT 61.563 55.000 0.00 0.00 37.19 4.58
75 76 1.077716 AAGGTCCGCCATGTAAGCC 60.078 57.895 0.00 0.00 37.19 4.35
76 77 1.376609 CCAAGGTCCGCCATGTAAGC 61.377 60.000 0.00 0.00 37.19 3.09
77 78 0.035439 ACCAAGGTCCGCCATGTAAG 60.035 55.000 0.00 0.00 37.19 2.34
78 79 0.322098 CACCAAGGTCCGCCATGTAA 60.322 55.000 0.00 0.00 37.19 2.41
79 80 1.298340 CACCAAGGTCCGCCATGTA 59.702 57.895 0.00 0.00 37.19 2.29
80 81 2.034066 CACCAAGGTCCGCCATGT 59.966 61.111 0.00 0.00 37.19 3.21
81 82 3.443045 GCACCAAGGTCCGCCATG 61.443 66.667 0.00 0.00 37.19 3.66
82 83 3.965258 TGCACCAAGGTCCGCCAT 61.965 61.111 0.00 0.00 37.19 4.40
83 84 4.947147 GTGCACCAAGGTCCGCCA 62.947 66.667 5.22 0.00 37.19 5.69
85 86 4.947147 TGGTGCACCAAGGTCCGC 62.947 66.667 36.10 6.55 44.35 5.54
86 87 2.107041 TACTGGTGCACCAAGGTCCG 62.107 60.000 36.71 26.13 46.97 4.79
87 88 0.605589 GTACTGGTGCACCAAGGTCC 60.606 60.000 36.71 20.68 46.97 4.46
88 89 0.107831 TGTACTGGTGCACCAAGGTC 59.892 55.000 36.71 25.58 46.97 3.85
89 90 0.179029 GTGTACTGGTGCACCAAGGT 60.179 55.000 36.71 31.81 46.97 3.50
90 91 2.629002 GTGTACTGGTGCACCAAGG 58.371 57.895 36.71 28.23 46.97 3.61
95 96 0.249741 AACTCGGTGTACTGGTGCAC 60.250 55.000 8.80 8.80 43.94 4.57
96 97 0.032952 GAACTCGGTGTACTGGTGCA 59.967 55.000 0.00 0.00 0.00 4.57
97 98 1.007336 CGAACTCGGTGTACTGGTGC 61.007 60.000 0.00 0.00 35.37 5.01
98 99 0.313043 ACGAACTCGGTGTACTGGTG 59.687 55.000 3.88 0.00 44.95 4.17
99 100 0.313043 CACGAACTCGGTGTACTGGT 59.687 55.000 3.88 0.00 44.95 4.00
100 101 0.388134 CCACGAACTCGGTGTACTGG 60.388 60.000 3.88 0.00 44.95 4.00
101 102 0.594602 TCCACGAACTCGGTGTACTG 59.405 55.000 3.88 0.00 44.95 2.74
102 103 0.879765 CTCCACGAACTCGGTGTACT 59.120 55.000 3.88 0.00 44.95 2.73
103 104 0.109412 CCTCCACGAACTCGGTGTAC 60.109 60.000 3.88 0.00 44.95 2.90
104 105 1.870055 GCCTCCACGAACTCGGTGTA 61.870 60.000 3.88 0.00 44.95 2.90
105 106 3.048602 CCTCCACGAACTCGGTGT 58.951 61.111 3.88 0.00 44.95 4.16
106 107 2.432628 GCCTCCACGAACTCGGTG 60.433 66.667 3.88 0.15 44.95 4.94
107 108 4.052229 CGCCTCCACGAACTCGGT 62.052 66.667 3.88 0.00 44.95 4.69
108 109 4.796231 CCGCCTCCACGAACTCGG 62.796 72.222 3.88 0.00 44.95 4.63
109 110 3.685214 CTCCGCCTCCACGAACTCG 62.685 68.421 0.00 0.00 46.33 4.18
110 111 2.182030 CTCCGCCTCCACGAACTC 59.818 66.667 0.00 0.00 34.06 3.01
111 112 4.070552 GCTCCGCCTCCACGAACT 62.071 66.667 0.00 0.00 34.06 3.01
128 129 4.554363 CTCCTCGTACAGGCGGCG 62.554 72.222 0.51 0.51 43.08 6.46
129 130 4.874977 GCTCCTCGTACAGGCGGC 62.875 72.222 0.00 0.00 43.08 6.53
130 131 4.554363 CGCTCCTCGTACAGGCGG 62.554 72.222 6.51 4.19 43.08 6.13
131 132 3.456431 CTCGCTCCTCGTACAGGCG 62.456 68.421 0.00 0.00 43.08 5.52
132 133 2.409651 CTCGCTCCTCGTACAGGC 59.590 66.667 6.51 0.00 43.08 4.85
133 134 2.409651 GCTCGCTCCTCGTACAGG 59.590 66.667 5.31 5.31 45.15 4.00
134 135 2.023461 CGCTCGCTCCTCGTACAG 59.977 66.667 0.00 0.00 39.67 2.74
135 136 3.506096 CCGCTCGCTCCTCGTACA 61.506 66.667 0.00 0.00 39.67 2.90
136 137 3.452024 GACCGCTCGCTCCTCGTAC 62.452 68.421 0.00 0.00 39.67 3.67
137 138 3.200593 GACCGCTCGCTCCTCGTA 61.201 66.667 0.00 0.00 39.67 3.43
158 159 4.222847 GACGATGACCTCCGCCCC 62.223 72.222 0.00 0.00 0.00 5.80
159 160 4.222847 GGACGATGACCTCCGCCC 62.223 72.222 0.00 0.00 0.00 6.13
160 161 3.140225 GAGGACGATGACCTCCGCC 62.140 68.421 0.00 0.00 45.64 6.13
161 162 2.413765 GAGGACGATGACCTCCGC 59.586 66.667 0.00 0.00 45.64 5.54
165 166 4.601084 TCTTCTTTAGAGGACGATGACCT 58.399 43.478 0.00 0.00 40.80 3.85
166 167 4.927422 CTCTTCTTTAGAGGACGATGACC 58.073 47.826 0.00 0.00 45.61 4.02
177 178 3.162666 TCGTTGCCTCCTCTTCTTTAGA 58.837 45.455 0.00 0.00 0.00 2.10
178 179 3.594603 TCGTTGCCTCCTCTTCTTTAG 57.405 47.619 0.00 0.00 0.00 1.85
179 180 3.369471 CCATCGTTGCCTCCTCTTCTTTA 60.369 47.826 0.00 0.00 0.00 1.85
180 181 2.616510 CCATCGTTGCCTCCTCTTCTTT 60.617 50.000 0.00 0.00 0.00 2.52
181 182 1.065854 CCATCGTTGCCTCCTCTTCTT 60.066 52.381 0.00 0.00 0.00 2.52
182 183 0.539051 CCATCGTTGCCTCCTCTTCT 59.461 55.000 0.00 0.00 0.00 2.85
183 184 1.092345 GCCATCGTTGCCTCCTCTTC 61.092 60.000 0.00 0.00 0.00 2.87
184 185 1.078143 GCCATCGTTGCCTCCTCTT 60.078 57.895 0.00 0.00 0.00 2.85
185 186 2.586792 GCCATCGTTGCCTCCTCT 59.413 61.111 0.00 0.00 0.00 3.69
186 187 2.892425 CGCCATCGTTGCCTCCTC 60.892 66.667 0.00 0.00 0.00 3.71
187 188 4.473520 CCGCCATCGTTGCCTCCT 62.474 66.667 0.00 0.00 0.00 3.69
197 198 4.166011 GTTGTCGCTGCCGCCATC 62.166 66.667 0.00 0.00 0.00 3.51
207 208 1.837747 CAACGTCAAAGTTGTTGTCGC 59.162 47.619 5.80 0.00 44.58 5.19
237 238 1.202428 CGGAGTCGGGGAAGATTCTTC 60.202 57.143 16.58 16.58 0.00 2.87
276 277 2.683465 CCACCTCCCATGGGGTCAG 61.683 68.421 30.93 20.05 44.74 3.51
287 288 1.059913 CCCATAGACATCCCACCTCC 58.940 60.000 0.00 0.00 0.00 4.30
289 290 0.647738 TCCCCATAGACATCCCACCT 59.352 55.000 0.00 0.00 0.00 4.00
301 303 1.382146 GGGTCGACCAGTCCCCATA 60.382 63.158 34.40 0.00 41.60 2.74
305 307 3.450115 CGAGGGTCGACCAGTCCC 61.450 72.222 34.40 18.14 46.82 4.46
308 310 2.436087 CTTTGCGAGGGTCGACCAGT 62.436 60.000 34.40 21.86 43.74 4.00
309 311 1.738099 CTTTGCGAGGGTCGACCAG 60.738 63.158 34.40 24.64 43.74 4.00
310 312 2.342279 CTTTGCGAGGGTCGACCA 59.658 61.111 34.40 12.40 43.74 4.02
311 313 1.737008 GACTTTGCGAGGGTCGACC 60.737 63.158 27.04 27.04 43.74 4.79
313 315 2.654877 GGACTTTGCGAGGGTCGA 59.345 61.111 0.00 0.00 43.74 4.20
315 317 0.391263 AATCGGACTTTGCGAGGGTC 60.391 55.000 0.00 1.79 44.87 4.46
329 332 8.488651 ACAGAAACATAAACCTTACTAATCGG 57.511 34.615 0.00 0.00 0.00 4.18
351 354 8.985805 ACCGAAACATAGTCTAGTTTTAAACAG 58.014 33.333 10.60 5.90 38.01 3.16
357 360 6.105397 TCCACCGAAACATAGTCTAGTTTT 57.895 37.500 8.11 0.53 38.01 2.43
373 376 8.998377 CACATAATTCATATTAACATCCACCGA 58.002 33.333 0.00 0.00 30.38 4.69
376 379 9.811655 CGACACATAATTCATATTAACATCCAC 57.188 33.333 0.00 0.00 30.38 4.02
388 391 7.495901 AGTCAGAATCTCGACACATAATTCAT 58.504 34.615 12.76 0.00 34.48 2.57
401 404 7.008810 GCAGAGTAAAACTTAGTCAGAATCTCG 59.991 40.741 4.52 0.00 0.00 4.04
404 407 7.064016 CCTGCAGAGTAAAACTTAGTCAGAATC 59.936 40.741 17.39 0.00 0.00 2.52
405 408 6.876257 CCTGCAGAGTAAAACTTAGTCAGAAT 59.124 38.462 17.39 0.00 0.00 2.40
410 413 7.548967 AGTATCCTGCAGAGTAAAACTTAGTC 58.451 38.462 17.39 0.00 0.00 2.59
450 453 4.335874 TGTTAGAGCAACTCTACCGATCTC 59.664 45.833 3.84 0.00 41.99 2.75
452 455 4.352887 GTGTTAGAGCAACTCTACCGATC 58.647 47.826 3.84 0.00 41.99 3.69
461 465 6.278363 TCTTTTCTTACGTGTTAGAGCAACT 58.722 36.000 0.00 0.00 38.05 3.16
472 476 9.337091 TCAGTTTTTCTTTTCTTTTCTTACGTG 57.663 29.630 0.00 0.00 0.00 4.49
488 492 9.611284 GTGCAAAATTTTCTTTTCAGTTTTTCT 57.389 25.926 0.00 0.00 0.00 2.52
489 493 9.392021 TGTGCAAAATTTTCTTTTCAGTTTTTC 57.608 25.926 0.00 0.00 0.00 2.29
490 494 9.396938 CTGTGCAAAATTTTCTTTTCAGTTTTT 57.603 25.926 0.00 0.00 0.00 1.94
495 499 8.392612 ACATTCTGTGCAAAATTTTCTTTTCAG 58.607 29.630 0.00 6.21 0.00 3.02
543 547 4.003648 GAGACTTGGTTATGTCCCAGTTG 58.996 47.826 0.00 0.00 34.30 3.16
544 548 3.009143 GGAGACTTGGTTATGTCCCAGTT 59.991 47.826 0.00 0.00 34.30 3.16
549 553 2.232941 TGACGGAGACTTGGTTATGTCC 59.767 50.000 0.00 0.00 32.86 4.02
585 589 8.198778 TCGATATGTACAATTTAGGTGCAGTTA 58.801 33.333 0.00 0.00 34.41 2.24
610 614 8.689972 AGATGAAAACCCATCAAAGTTGATATC 58.310 33.333 6.22 0.00 45.62 1.63
618 622 6.660949 AGACCTAAGATGAAAACCCATCAAAG 59.339 38.462 0.00 0.00 43.99 2.77
661 665 6.036517 CGTCCTTGGACTCAGAATTCATAAAG 59.963 42.308 16.60 1.90 0.00 1.85
702 1760 1.542915 CCAGGTTCCAACATGCAGAAG 59.457 52.381 0.00 0.00 39.22 2.85
703 1761 1.144708 TCCAGGTTCCAACATGCAGAA 59.855 47.619 0.00 0.00 39.22 3.02
753 1840 9.611284 GCTTTCAAAGTTTTTGTCTCAATTTTT 57.389 25.926 0.00 0.00 0.00 1.94
754 1841 7.956943 CGCTTTCAAAGTTTTTGTCTCAATTTT 59.043 29.630 0.00 0.00 0.00 1.82
755 1842 7.117667 ACGCTTTCAAAGTTTTTGTCTCAATTT 59.882 29.630 0.00 0.00 0.00 1.82
756 1843 6.589907 ACGCTTTCAAAGTTTTTGTCTCAATT 59.410 30.769 0.00 0.00 0.00 2.32
757 1844 6.099341 ACGCTTTCAAAGTTTTTGTCTCAAT 58.901 32.000 0.00 0.00 0.00 2.57
760 1856 7.381079 GTTTACGCTTTCAAAGTTTTTGTCTC 58.619 34.615 0.00 0.00 0.00 3.36
797 3654 1.939934 CTCACGAACAAGAGGTTTGCA 59.060 47.619 0.00 0.00 43.55 4.08
798 3655 1.334149 GCTCACGAACAAGAGGTTTGC 60.334 52.381 0.00 0.00 43.55 3.68
799 3656 1.939934 TGCTCACGAACAAGAGGTTTG 59.060 47.619 0.00 0.00 44.99 2.93
866 3724 2.223386 CCAACCAACATGAAAACGACGT 60.223 45.455 0.00 0.00 0.00 4.34
871 3729 2.871633 CAAGCCCAACCAACATGAAAAC 59.128 45.455 0.00 0.00 0.00 2.43
877 3735 5.268387 TCAATATACAAGCCCAACCAACAT 58.732 37.500 0.00 0.00 0.00 2.71
881 3739 4.020543 GGTTCAATATACAAGCCCAACCA 58.979 43.478 0.00 0.00 33.59 3.67
932 3792 0.911769 TGAGGGGTAAGATGCAGTGG 59.088 55.000 0.00 0.00 0.00 4.00
962 3822 0.868406 CCAACGAAAGAGGCAGTGAC 59.132 55.000 0.00 0.00 0.00 3.67
1036 3898 3.923461 CACGAACAAGAGGTTTGCAAAAA 59.077 39.130 14.67 0.00 43.55 1.94
1037 3899 3.191581 TCACGAACAAGAGGTTTGCAAAA 59.808 39.130 14.67 0.00 43.55 2.44
1038 3900 2.750166 TCACGAACAAGAGGTTTGCAAA 59.250 40.909 8.05 8.05 43.55 3.68
1039 3901 2.360844 TCACGAACAAGAGGTTTGCAA 58.639 42.857 0.00 0.00 43.55 4.08
1040 3902 2.031258 TCACGAACAAGAGGTTTGCA 57.969 45.000 0.00 0.00 43.55 4.08
1041 3903 2.716398 GTTCACGAACAAGAGGTTTGC 58.284 47.619 5.05 0.00 43.55 3.68
1052 3914 3.378959 AAACTTGTCGTGTTCACGAAC 57.621 42.857 25.60 19.66 44.12 3.95
1053 3915 3.000872 CGTAAACTTGTCGTGTTCACGAA 60.001 43.478 25.60 13.09 40.35 3.85
1054 3916 2.531103 CGTAAACTTGTCGTGTTCACGA 59.469 45.455 21.38 21.38 40.35 4.35
1055 3917 2.346924 CCGTAAACTTGTCGTGTTCACG 60.347 50.000 17.57 17.57 38.39 4.35
1057 3919 3.117794 CTCCGTAAACTTGTCGTGTTCA 58.882 45.455 0.00 0.00 0.00 3.18
1058 3920 2.473984 CCTCCGTAAACTTGTCGTGTTC 59.526 50.000 0.00 0.00 0.00 3.18
1059 3921 2.476821 CCTCCGTAAACTTGTCGTGTT 58.523 47.619 0.00 0.00 0.00 3.32
1060 3922 1.870993 GCCTCCGTAAACTTGTCGTGT 60.871 52.381 0.00 0.00 0.00 4.49
1061 3923 0.788391 GCCTCCGTAAACTTGTCGTG 59.212 55.000 0.00 0.00 0.00 4.35
1062 3924 0.320160 GGCCTCCGTAAACTTGTCGT 60.320 55.000 0.00 0.00 0.00 4.34
1063 3925 1.017701 GGGCCTCCGTAAACTTGTCG 61.018 60.000 0.84 0.00 0.00 4.35
1085 3947 0.608130 GAAATGTGGTTGGGCCCTTC 59.392 55.000 25.70 15.66 36.04 3.46
1086 3948 1.184970 CGAAATGTGGTTGGGCCCTT 61.185 55.000 25.70 5.71 36.04 3.95
1087 3949 1.606313 CGAAATGTGGTTGGGCCCT 60.606 57.895 25.70 0.00 36.04 5.19
1088 3950 1.182385 TTCGAAATGTGGTTGGGCCC 61.182 55.000 17.59 17.59 36.04 5.80
1092 3954 0.724453 CGCGTTCGAAATGTGGTTGG 60.724 55.000 0.00 0.00 38.10 3.77
1093 3955 0.041663 ACGCGTTCGAAATGTGGTTG 60.042 50.000 5.58 0.00 39.41 3.77
1094 3956 1.458064 CTACGCGTTCGAAATGTGGTT 59.542 47.619 20.78 0.00 39.41 3.67
1095 3957 1.065358 CTACGCGTTCGAAATGTGGT 58.935 50.000 20.78 8.93 39.41 4.16
1096 3958 1.065358 ACTACGCGTTCGAAATGTGG 58.935 50.000 20.78 10.85 39.41 4.17
1097 3959 2.848562 AACTACGCGTTCGAAATGTG 57.151 45.000 20.78 4.97 39.41 3.21
1098 3960 3.659876 CGAAAACTACGCGTTCGAAATGT 60.660 43.478 20.78 1.11 45.32 2.71
1099 3961 2.824862 CGAAAACTACGCGTTCGAAATG 59.175 45.455 20.78 0.00 45.32 2.32
1100 3962 2.472488 ACGAAAACTACGCGTTCGAAAT 59.528 40.909 30.17 10.83 45.32 2.17
1101 3963 1.851666 ACGAAAACTACGCGTTCGAAA 59.148 42.857 30.17 7.85 45.32 3.46
1102 3964 1.187704 CACGAAAACTACGCGTTCGAA 59.812 47.619 30.17 8.24 45.32 3.71
1103 3965 0.771756 CACGAAAACTACGCGTTCGA 59.228 50.000 30.17 8.61 45.32 3.71
1105 3967 2.089581 CCTACACGAAAACTACGCGTTC 59.910 50.000 20.78 7.57 35.90 3.95
1106 3968 2.053627 CCTACACGAAAACTACGCGTT 58.946 47.619 20.78 0.00 35.90 4.84
1107 3969 1.001378 ACCTACACGAAAACTACGCGT 60.001 47.619 19.17 19.17 39.04 6.01
1108 3970 1.689959 ACCTACACGAAAACTACGCG 58.310 50.000 3.53 3.53 0.00 6.01
1109 3971 2.156310 CCAACCTACACGAAAACTACGC 59.844 50.000 0.00 0.00 0.00 4.42
1110 3972 2.733026 CCCAACCTACACGAAAACTACG 59.267 50.000 0.00 0.00 0.00 3.51
1111 3973 2.481568 GCCCAACCTACACGAAAACTAC 59.518 50.000 0.00 0.00 0.00 2.73
1112 3974 2.369532 AGCCCAACCTACACGAAAACTA 59.630 45.455 0.00 0.00 0.00 2.24
1113 3975 1.142262 AGCCCAACCTACACGAAAACT 59.858 47.619 0.00 0.00 0.00 2.66
1114 3976 1.601166 AGCCCAACCTACACGAAAAC 58.399 50.000 0.00 0.00 0.00 2.43
1115 3977 1.950909 CAAGCCCAACCTACACGAAAA 59.049 47.619 0.00 0.00 0.00 2.29
1116 3978 1.134037 ACAAGCCCAACCTACACGAAA 60.134 47.619 0.00 0.00 0.00 3.46
1117 3979 0.470766 ACAAGCCCAACCTACACGAA 59.529 50.000 0.00 0.00 0.00 3.85
1118 3980 1.340088 TACAAGCCCAACCTACACGA 58.660 50.000 0.00 0.00 0.00 4.35
1119 3981 2.396590 ATACAAGCCCAACCTACACG 57.603 50.000 0.00 0.00 0.00 4.49
1120 3982 5.433526 TCAATATACAAGCCCAACCTACAC 58.566 41.667 0.00 0.00 0.00 2.90
1121 3983 5.702065 TCAATATACAAGCCCAACCTACA 57.298 39.130 0.00 0.00 0.00 2.74
1122 3984 5.298527 GGTTCAATATACAAGCCCAACCTAC 59.701 44.000 0.00 0.00 31.17 3.18
1123 3985 5.044772 TGGTTCAATATACAAGCCCAACCTA 60.045 40.000 0.00 0.00 34.35 3.08
1124 3986 4.264172 TGGTTCAATATACAAGCCCAACCT 60.264 41.667 0.00 0.00 34.35 3.50
1125 3987 4.020543 TGGTTCAATATACAAGCCCAACC 58.979 43.478 0.00 0.00 33.92 3.77
1126 3988 4.461081 TGTGGTTCAATATACAAGCCCAAC 59.539 41.667 0.00 0.00 0.00 3.77
1127 3989 4.667573 TGTGGTTCAATATACAAGCCCAA 58.332 39.130 0.00 0.00 0.00 4.12
1128 3990 4.308526 TGTGGTTCAATATACAAGCCCA 57.691 40.909 0.00 0.00 0.00 5.36
1129 3991 5.248870 CTTGTGGTTCAATATACAAGCCC 57.751 43.478 0.00 0.00 42.16 5.19
1133 3995 8.283992 CACGTAAACTTGTGGTTCAATATACAA 58.716 33.333 0.00 0.00 37.12 2.41
1134 3996 7.441760 ACACGTAAACTTGTGGTTCAATATACA 59.558 33.333 0.00 0.00 40.39 2.29
1135 3997 7.799784 ACACGTAAACTTGTGGTTCAATATAC 58.200 34.615 0.00 0.00 40.39 1.47
1136 3998 7.966246 ACACGTAAACTTGTGGTTCAATATA 57.034 32.000 0.00 0.00 40.39 0.86
1137 3999 6.870971 ACACGTAAACTTGTGGTTCAATAT 57.129 33.333 0.00 0.00 40.39 1.28
1138 4000 7.516470 CGTTACACGTAAACTTGTGGTTCAATA 60.516 37.037 10.25 0.00 40.39 1.90
1139 4001 6.488817 GTTACACGTAAACTTGTGGTTCAAT 58.511 36.000 2.76 0.00 40.39 2.57
1140 4002 5.445673 CGTTACACGTAAACTTGTGGTTCAA 60.446 40.000 10.25 0.00 40.39 2.69
1141 4003 4.032672 CGTTACACGTAAACTTGTGGTTCA 59.967 41.667 10.25 0.00 40.39 3.18
1142 4004 4.508052 CGTTACACGTAAACTTGTGGTTC 58.492 43.478 10.25 0.00 40.39 3.62
1143 4005 3.309410 CCGTTACACGTAAACTTGTGGTT 59.691 43.478 10.25 0.00 40.58 3.67
1144 4006 2.865551 CCGTTACACGTAAACTTGTGGT 59.134 45.455 10.25 0.00 40.58 4.16
1145 4007 2.348779 GCCGTTACACGTAAACTTGTGG 60.349 50.000 10.25 6.04 40.58 4.17
1146 4008 2.348779 GGCCGTTACACGTAAACTTGTG 60.349 50.000 10.25 0.00 40.58 3.33
1147 4009 1.866601 GGCCGTTACACGTAAACTTGT 59.133 47.619 10.25 0.00 40.58 3.16
1148 4010 1.195222 GGGCCGTTACACGTAAACTTG 59.805 52.381 0.00 4.14 40.58 3.16
1149 4011 1.511850 GGGCCGTTACACGTAAACTT 58.488 50.000 0.00 0.00 40.58 2.66
1150 4012 0.667184 CGGGCCGTTACACGTAAACT 60.667 55.000 19.97 0.00 40.58 2.66
1151 4013 1.780931 CGGGCCGTTACACGTAAAC 59.219 57.895 19.97 0.00 40.58 2.01
1152 4014 2.026520 GCGGGCCGTTACACGTAAA 61.027 57.895 28.82 0.00 40.58 2.01
1153 4015 2.432285 GCGGGCCGTTACACGTAA 60.432 61.111 28.82 0.00 40.58 3.18
1154 4016 3.340953 GAGCGGGCCGTTACACGTA 62.341 63.158 28.82 0.00 40.58 3.57
1155 4017 4.729856 GAGCGGGCCGTTACACGT 62.730 66.667 28.82 3.33 40.58 4.49
1156 4018 4.728102 TGAGCGGGCCGTTACACG 62.728 66.667 28.82 0.00 42.11 4.49
1157 4019 2.216750 TAGTGAGCGGGCCGTTACAC 62.217 60.000 29.34 29.34 0.00 2.90
1158 4020 1.940883 CTAGTGAGCGGGCCGTTACA 61.941 60.000 28.82 20.86 0.00 2.41
1159 4021 1.226888 CTAGTGAGCGGGCCGTTAC 60.227 63.158 28.82 22.14 0.00 2.50
1160 4022 1.660560 GACTAGTGAGCGGGCCGTTA 61.661 60.000 28.82 11.38 0.00 3.18
1161 4023 2.995574 ACTAGTGAGCGGGCCGTT 60.996 61.111 28.82 23.64 0.00 4.44
1162 4024 3.450115 GACTAGTGAGCGGGCCGT 61.450 66.667 28.82 14.51 0.00 5.68
1163 4025 3.449227 TGACTAGTGAGCGGGCCG 61.449 66.667 24.35 24.35 0.00 6.13
1164 4026 2.184579 GTGACTAGTGAGCGGGCC 59.815 66.667 0.00 0.00 0.00 5.80
1165 4027 1.153745 CAGTGACTAGTGAGCGGGC 60.154 63.158 0.00 0.00 0.00 6.13
1624 4486 4.256278 AGGATAGGGAGGCCGGGG 62.256 72.222 2.18 0.00 0.00 5.73
1689 4551 1.680338 ATAACCCGCTCAAATGCTCC 58.320 50.000 0.00 0.00 0.00 4.70
1717 4579 8.630054 AAGTTAAAGCTTGACCACATTATGTA 57.370 30.769 0.00 0.00 0.00 2.29
1757 4619 9.294030 CAAATCCTTTATCACTTTGCTATTGTC 57.706 33.333 0.00 0.00 0.00 3.18
1759 4621 8.123445 GCAAATCCTTTATCACTTTGCTATTG 57.877 34.615 10.19 0.00 45.01 1.90
1766 4628 5.357032 CGGGTAGCAAATCCTTTATCACTTT 59.643 40.000 0.00 0.00 0.00 2.66
1789 4651 6.450545 ACTCACCTGATATATGACAACATCG 58.549 40.000 0.00 0.00 37.87 3.84
1845 4707 8.263940 TCACTAAATTAACCTCAGCATAACAC 57.736 34.615 0.00 0.00 0.00 3.32
1855 4717 6.238759 GGACATGGCATCACTAAATTAACCTC 60.239 42.308 0.00 0.00 0.00 3.85
1856 4718 5.594317 GGACATGGCATCACTAAATTAACCT 59.406 40.000 0.00 0.00 0.00 3.50
1857 4719 5.359576 TGGACATGGCATCACTAAATTAACC 59.640 40.000 0.00 0.00 0.00 2.85
1880 4774 5.366460 ACAGCTCTCCAATCATCTACATTG 58.634 41.667 0.00 0.00 0.00 2.82
1882 4776 5.627182 AACAGCTCTCCAATCATCTACAT 57.373 39.130 0.00 0.00 0.00 2.29
1884 4778 4.574013 CCAAACAGCTCTCCAATCATCTAC 59.426 45.833 0.00 0.00 0.00 2.59
1901 4795 7.118496 ACAAATGATTTCCTGTTACCAAACA 57.882 32.000 0.00 0.00 43.32 2.83
1925 4819 1.207089 CGAGGGAGTATGTGGCAAGAA 59.793 52.381 0.00 0.00 0.00 2.52
1938 4832 2.238898 ACTTATTTTGGGACCGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
1939 4833 2.026636 CACTTATTTTGGGACCGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
1940 4834 2.290705 ACACTTATTTTGGGACCGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
1941 4835 3.007635 GACACTTATTTTGGGACCGAGG 58.992 50.000 0.00 0.00 0.00 4.63
1942 4836 2.671396 CGACACTTATTTTGGGACCGAG 59.329 50.000 0.00 0.00 0.00 4.63
1943 4837 2.690786 CGACACTTATTTTGGGACCGA 58.309 47.619 0.00 0.00 0.00 4.69
1944 4838 1.129811 GCGACACTTATTTTGGGACCG 59.870 52.381 0.00 0.00 0.00 4.79
1945 4839 2.161609 CAGCGACACTTATTTTGGGACC 59.838 50.000 0.00 0.00 0.00 4.46
1946 4840 3.071479 TCAGCGACACTTATTTTGGGAC 58.929 45.455 0.00 0.00 0.00 4.46
1947 4841 3.244422 ACTCAGCGACACTTATTTTGGGA 60.244 43.478 0.00 0.00 0.00 4.37
1948 4842 3.074412 ACTCAGCGACACTTATTTTGGG 58.926 45.455 0.00 0.00 0.00 4.12
1949 4843 4.749245 AACTCAGCGACACTTATTTTGG 57.251 40.909 0.00 0.00 0.00 3.28
1950 4844 6.467723 ACTAACTCAGCGACACTTATTTTG 57.532 37.500 0.00 0.00 0.00 2.44
1951 4845 6.310711 GCTACTAACTCAGCGACACTTATTTT 59.689 38.462 0.00 0.00 0.00 1.82
1952 4846 5.805994 GCTACTAACTCAGCGACACTTATTT 59.194 40.000 0.00 0.00 0.00 1.40
1953 4847 5.341617 GCTACTAACTCAGCGACACTTATT 58.658 41.667 0.00 0.00 0.00 1.40
1954 4848 4.922719 GCTACTAACTCAGCGACACTTAT 58.077 43.478 0.00 0.00 0.00 1.73
1955 4849 4.352600 GCTACTAACTCAGCGACACTTA 57.647 45.455 0.00 0.00 0.00 2.24
1956 4850 3.219052 GCTACTAACTCAGCGACACTT 57.781 47.619 0.00 0.00 0.00 3.16
1957 4851 2.923605 GCTACTAACTCAGCGACACT 57.076 50.000 0.00 0.00 0.00 3.55
1965 4859 3.056821 ACAAGATGTGCGCTACTAACTCA 60.057 43.478 9.73 0.00 0.00 3.41
1966 4860 3.512680 ACAAGATGTGCGCTACTAACTC 58.487 45.455 9.73 0.00 0.00 3.01
1967 4861 3.594603 ACAAGATGTGCGCTACTAACT 57.405 42.857 9.73 4.08 0.00 2.24
1970 4864 2.425668 TGCTACAAGATGTGCGCTACTA 59.574 45.455 9.73 0.00 32.05 1.82
1971 4865 1.204704 TGCTACAAGATGTGCGCTACT 59.795 47.619 9.73 0.00 32.05 2.57
1972 4866 1.324736 GTGCTACAAGATGTGCGCTAC 59.675 52.381 9.73 5.95 34.50 3.58
1973 4867 1.640428 GTGCTACAAGATGTGCGCTA 58.360 50.000 9.73 0.00 34.50 4.26
1974 4868 1.021390 GGTGCTACAAGATGTGCGCT 61.021 55.000 9.73 0.00 36.18 5.92
1975 4869 1.021390 AGGTGCTACAAGATGTGCGC 61.021 55.000 0.00 0.00 35.62 6.09
1977 4871 2.393271 AGAGGTGCTACAAGATGTGC 57.607 50.000 0.00 0.00 0.00 4.57
1980 4874 7.101652 TCTTAGTTAGAGGTGCTACAAGATG 57.898 40.000 0.00 0.00 0.00 2.90
1981 4875 7.341445 CTCTTAGTTAGAGGTGCTACAAGAT 57.659 40.000 0.00 0.00 45.61 2.40
1994 4888 8.954350 ACAGTATAGCGTTTTCTCTTAGTTAGA 58.046 33.333 0.00 0.00 0.00 2.10
2010 5017 5.402568 CCTGCACTTTACATACAGTATAGCG 59.597 44.000 0.00 0.00 35.82 4.26
2013 5020 6.323996 AGCTCCTGCACTTTACATACAGTATA 59.676 38.462 0.00 0.00 42.74 1.47
2015 5022 4.466370 AGCTCCTGCACTTTACATACAGTA 59.534 41.667 0.00 0.00 42.74 2.74
2016 5023 3.261897 AGCTCCTGCACTTTACATACAGT 59.738 43.478 0.00 0.00 42.74 3.55
2017 5024 3.866651 AGCTCCTGCACTTTACATACAG 58.133 45.455 0.00 0.00 42.74 2.74
2019 5026 4.271291 GCTAAGCTCCTGCACTTTACATAC 59.729 45.833 0.00 0.00 42.74 2.39
2028 5035 0.654683 CGATTGCTAAGCTCCTGCAC 59.345 55.000 7.58 0.00 42.74 4.57
2035 5042 1.480219 GCGTACGCGATTGCTAAGCT 61.480 55.000 26.17 0.00 41.33 3.74
2052 5059 7.878477 TTTATTTAAGGATATGACCTACGCG 57.122 36.000 3.53 3.53 39.62 6.01
2080 5087 9.883142 CAACAAAATTAGCCCCTTAATTATTCA 57.117 29.630 0.00 0.00 33.32 2.57
2081 5088 8.826710 GCAACAAAATTAGCCCCTTAATTATTC 58.173 33.333 0.00 0.00 33.32 1.75
2084 5091 7.246171 TGCAACAAAATTAGCCCCTTAATTA 57.754 32.000 0.00 0.00 33.32 1.40
2093 5100 4.666928 CACCAATGCAACAAAATTAGCC 57.333 40.909 0.00 0.00 0.00 3.93
2125 5132 3.063997 CCAGATAAAGTTAAGCAGCGGTG 59.936 47.826 10.98 10.98 0.00 4.94
2126 5133 3.270877 CCAGATAAAGTTAAGCAGCGGT 58.729 45.455 0.00 0.00 0.00 5.68
2127 5134 3.270877 ACCAGATAAAGTTAAGCAGCGG 58.729 45.455 0.00 0.00 0.00 5.52
2128 5135 5.109903 AGTACCAGATAAAGTTAAGCAGCG 58.890 41.667 0.00 0.00 0.00 5.18
2129 5136 6.371825 ACAAGTACCAGATAAAGTTAAGCAGC 59.628 38.462 0.00 0.00 0.00 5.25
2130 5137 7.624344 GCACAAGTACCAGATAAAGTTAAGCAG 60.624 40.741 0.00 0.00 0.00 4.24
2131 5138 6.148811 GCACAAGTACCAGATAAAGTTAAGCA 59.851 38.462 0.00 0.00 0.00 3.91
2132 5139 6.148811 TGCACAAGTACCAGATAAAGTTAAGC 59.851 38.462 0.00 0.00 0.00 3.09
2133 5140 7.667043 TGCACAAGTACCAGATAAAGTTAAG 57.333 36.000 0.00 0.00 0.00 1.85
2134 5141 9.899661 ATATGCACAAGTACCAGATAAAGTTAA 57.100 29.630 0.00 0.00 0.00 2.01
2169 5176 8.338072 AGATGGTCGTACTATCCATTTACTAG 57.662 38.462 12.31 0.00 41.33 2.57
2187 5194 4.216687 CCTCTTATAGGTGTCGAGATGGTC 59.783 50.000 0.00 0.00 40.94 4.02
2219 5226 4.019860 ACTGAGAGAGCTGAATAAAGCCAA 60.020 41.667 0.00 0.00 44.68 4.52
2221 5228 4.135747 ACTGAGAGAGCTGAATAAAGCC 57.864 45.455 0.00 0.00 44.68 4.35
2241 5248 5.243426 TGTTGAGGCAGAAACAGTTTTAC 57.757 39.130 0.00 0.00 32.66 2.01
2242 5249 7.309133 CCATATGTTGAGGCAGAAACAGTTTTA 60.309 37.037 0.00 0.00 39.50 1.52
2274 5281 8.946085 CAGTAGTAGCATTACCAAAGAAATTCA 58.054 33.333 0.00 0.00 0.00 2.57
2281 5288 6.183360 GCTGAACAGTAGTAGCATTACCAAAG 60.183 42.308 3.77 0.00 36.24 2.77
2292 5299 4.459685 AGTGGTACAGCTGAACAGTAGTAG 59.540 45.833 23.35 0.00 41.80 2.57
2304 5313 8.685838 TTAACAGAATTTTAAGTGGTACAGCT 57.314 30.769 0.00 0.00 41.80 4.24
2320 5329 8.322091 AGTAGTAGCATTTCCACTTAACAGAAT 58.678 33.333 0.00 0.00 0.00 2.40
2324 5333 5.642063 GCAGTAGTAGCATTTCCACTTAACA 59.358 40.000 0.00 0.00 0.00 2.41
2325 5334 5.064834 GGCAGTAGTAGCATTTCCACTTAAC 59.935 44.000 0.00 0.00 0.00 2.01
2326 5335 5.183228 GGCAGTAGTAGCATTTCCACTTAA 58.817 41.667 0.00 0.00 0.00 1.85
2327 5336 4.224147 TGGCAGTAGTAGCATTTCCACTTA 59.776 41.667 0.00 0.00 0.00 2.24
2328 5337 3.009033 TGGCAGTAGTAGCATTTCCACTT 59.991 43.478 0.00 0.00 0.00 3.16
2330 5339 2.678336 GTGGCAGTAGTAGCATTTCCAC 59.322 50.000 0.00 0.00 36.39 4.02
2332 5341 3.268023 AGTGGCAGTAGTAGCATTTCC 57.732 47.619 0.00 0.00 0.00 3.13
2333 5342 4.695455 TCAAAGTGGCAGTAGTAGCATTTC 59.305 41.667 0.00 0.00 0.00 2.17
2334 5343 4.651778 TCAAAGTGGCAGTAGTAGCATTT 58.348 39.130 0.00 0.00 0.00 2.32
2335 5344 4.286297 TCAAAGTGGCAGTAGTAGCATT 57.714 40.909 0.00 0.00 0.00 3.56
2336 5345 3.981071 TCAAAGTGGCAGTAGTAGCAT 57.019 42.857 0.00 0.00 0.00 3.79
2337 5346 3.981071 ATCAAAGTGGCAGTAGTAGCA 57.019 42.857 0.00 0.00 0.00 3.49
2338 5347 6.927294 AATAATCAAAGTGGCAGTAGTAGC 57.073 37.500 0.00 0.00 0.00 3.58
2341 5350 9.243105 ACAATAAATAATCAAAGTGGCAGTAGT 57.757 29.630 0.00 0.00 0.00 2.73
2362 5371 9.626045 CACAACTCGCTATCAGATATTACAATA 57.374 33.333 0.00 0.00 0.00 1.90
2363 5372 8.144478 ACACAACTCGCTATCAGATATTACAAT 58.856 33.333 0.00 0.00 0.00 2.71
2365 5374 6.918022 CACACAACTCGCTATCAGATATTACA 59.082 38.462 0.00 0.00 0.00 2.41
2366 5375 7.139392 TCACACAACTCGCTATCAGATATTAC 58.861 38.462 0.00 0.00 0.00 1.89
2367 5376 7.272037 TCACACAACTCGCTATCAGATATTA 57.728 36.000 0.00 0.00 0.00 0.98
2368 5377 6.149129 TCACACAACTCGCTATCAGATATT 57.851 37.500 0.00 0.00 0.00 1.28
2369 5378 5.774498 TCACACAACTCGCTATCAGATAT 57.226 39.130 0.00 0.00 0.00 1.63
2371 5380 4.456280 TTCACACAACTCGCTATCAGAT 57.544 40.909 0.00 0.00 0.00 2.90
2373 5382 6.088749 GCTATATTCACACAACTCGCTATCAG 59.911 42.308 0.00 0.00 0.00 2.90
2383 5409 7.499232 AGGGACAAATAGCTATATTCACACAAC 59.501 37.037 6.68 0.00 31.02 3.32
2397 5423 9.561069 TCATTAGAATTTAGAGGGACAAATAGC 57.439 33.333 0.00 0.00 0.00 2.97
2511 5537 5.474532 CCACAATTCACTTTCCATGAGAAGA 59.525 40.000 12.97 0.00 35.40 2.87
2580 5606 4.080687 TGGTGATGCACAAGATCATGAAA 58.919 39.130 4.68 0.00 35.86 2.69
2602 5628 5.190528 TGGGAAAGATCATTAACAGAGAGCT 59.809 40.000 0.00 0.00 0.00 4.09
2626 5652 8.497910 TGCCCAGACTCTAGAAATTAGAATAT 57.502 34.615 0.00 0.00 0.00 1.28
2632 5658 3.134804 GGCTGCCCAGACTCTAGAAATTA 59.865 47.826 7.66 0.00 32.39 1.40
2681 5707 4.317671 AGGCAATAAAATCTGCTCATGC 57.682 40.909 0.00 0.00 38.65 4.06
2711 5738 5.894298 AGGGAATGATGCAGACACTAATA 57.106 39.130 0.00 0.00 0.00 0.98
2757 5784 3.282021 TCTGAAAATATGCAGGCCAGTC 58.718 45.455 5.01 0.00 33.05 3.51
2810 5837 2.286184 CCAACGGTTGAACGACTTCAAG 60.286 50.000 21.88 0.00 45.22 3.02
2873 5900 6.316390 CCAGTGGGATAACAAGTGATAGTTTC 59.684 42.308 0.00 0.00 35.59 2.78
2920 5947 7.284820 ACAGTTGTACAACATAAAAGTAGGGT 58.715 34.615 33.93 11.20 43.47 4.34
2990 6017 2.017049 AGCAACTGAAAACGAACAGCT 58.983 42.857 0.00 0.00 37.61 4.24
3024 6051 2.687370 GCCAGCGAAATGGATTTTGTT 58.313 42.857 5.98 0.00 43.57 2.83
3127 6161 2.819608 GCCTTTAGAATTGTGCCACTCA 59.180 45.455 0.00 0.00 0.00 3.41
3280 6314 3.461085 AGATGGGCCTATCATTGAACTGT 59.539 43.478 28.72 3.96 0.00 3.55
3347 6381 3.575399 CAAAAGGTGCACTTCTGGC 57.425 52.632 17.98 0.00 38.85 4.85
3920 6958 9.753674 ATGACCTAGGAAATGAATTCTTTTACA 57.246 29.630 23.75 12.98 38.18 2.41
4076 7115 4.871822 TCTTGATGTCCTGAGGATGTCTA 58.128 43.478 3.65 2.44 32.73 2.59
4113 7152 4.439563 GGGTATGAAAAGGCACCATTAACG 60.440 45.833 0.00 0.00 32.42 3.18
4258 7297 9.877178 ATACTGTTCAAAGTATCAACTTAGAGG 57.123 33.333 0.00 0.00 45.37 3.69
4419 7459 6.172630 AGCATTTGTCCAAGTCAAACTTTTT 58.827 32.000 0.00 0.00 36.03 1.94
4636 7678 1.001974 TGGCAACGCTCAGTTATCTGT 59.998 47.619 0.83 0.00 42.02 3.41
4641 7683 1.961793 AACTTGGCAACGCTCAGTTA 58.038 45.000 0.00 0.00 42.02 2.24
4717 7759 2.530151 AGGCAACCCTGAGCTCCA 60.530 61.111 12.15 0.00 40.94 3.86
4757 7803 3.810310 CTACAGGGAGTAGCCTCTTTG 57.190 52.381 0.00 0.00 43.40 2.77
4855 7988 7.172342 TGTATACAAATATATGGTTCAGGCCC 58.828 38.462 2.20 0.00 0.00 5.80
5010 8143 9.655769 CATAATCTGTACAGAAATAATGCACAC 57.344 33.333 28.43 0.00 41.36 3.82
5280 8413 0.241749 CTGAAAGCCAGCGCAAATCA 59.758 50.000 11.47 4.17 35.89 2.57
5470 8603 1.339610 GCATTGGTTAGTGGTGTGCAA 59.660 47.619 0.00 0.00 0.00 4.08
5512 8645 2.293399 GCCAACCAAGAAAGTACCACTG 59.707 50.000 0.00 0.00 0.00 3.66
5581 8814 0.482446 AGTCAATGGCTTTCACCCCA 59.518 50.000 0.00 0.00 35.21 4.96
5582 8815 0.890683 CAGTCAATGGCTTTCACCCC 59.109 55.000 0.00 0.00 0.00 4.95
5587 8820 5.703876 CCTAAAGAACAGTCAATGGCTTTC 58.296 41.667 0.00 0.00 38.13 2.62
5594 8827 4.520492 CCTTGTGCCTAAAGAACAGTCAAT 59.480 41.667 0.00 0.00 0.00 2.57
5595 8828 3.882888 CCTTGTGCCTAAAGAACAGTCAA 59.117 43.478 0.00 0.00 0.00 3.18
5602 8836 4.039488 TCGTAAGACCTTGTGCCTAAAGAA 59.961 41.667 0.00 0.00 45.01 2.52
5622 8856 0.393077 CCTTCAATAGGCCCGATCGT 59.607 55.000 15.09 0.00 37.17 3.73
5623 8857 3.217242 CCTTCAATAGGCCCGATCG 57.783 57.895 8.51 8.51 37.17 3.69
5652 8889 5.313506 AGGTTTCTAGAATGGGAGGAAAAGT 59.686 40.000 5.89 0.00 0.00 2.66
5653 8890 5.649831 CAGGTTTCTAGAATGGGAGGAAAAG 59.350 44.000 5.89 0.00 0.00 2.27
5654 8891 5.312178 TCAGGTTTCTAGAATGGGAGGAAAA 59.688 40.000 5.89 0.00 0.00 2.29
5656 8893 4.435137 TCAGGTTTCTAGAATGGGAGGAA 58.565 43.478 5.89 0.00 0.00 3.36
5657 8894 4.074799 TCAGGTTTCTAGAATGGGAGGA 57.925 45.455 5.89 0.00 0.00 3.71
5658 8895 4.712476 CATCAGGTTTCTAGAATGGGAGG 58.288 47.826 5.89 0.68 0.00 4.30
5660 8897 3.117888 GGCATCAGGTTTCTAGAATGGGA 60.118 47.826 5.89 2.85 0.00 4.37
5662 8899 3.889815 TGGCATCAGGTTTCTAGAATGG 58.110 45.455 5.89 0.00 0.00 3.16
5664 8901 4.340381 GCATTGGCATCAGGTTTCTAGAAT 59.660 41.667 5.89 0.00 40.72 2.40
5665 8902 3.696051 GCATTGGCATCAGGTTTCTAGAA 59.304 43.478 0.00 0.00 40.72 2.10
5687 8926 4.260948 GCTTCTCCTGTCAACTGAAAAGTG 60.261 45.833 0.00 0.00 0.00 3.16
5688 8927 3.879892 GCTTCTCCTGTCAACTGAAAAGT 59.120 43.478 0.00 0.00 0.00 2.66
5692 8931 2.700371 TCAGCTTCTCCTGTCAACTGAA 59.300 45.455 0.00 0.00 34.47 3.02
5693 8932 2.319844 TCAGCTTCTCCTGTCAACTGA 58.680 47.619 0.00 0.00 34.47 3.41
5718 8957 2.884639 GCAGTTCTTTTAGCACCTCCAA 59.115 45.455 0.00 0.00 0.00 3.53
5856 9095 2.649531 ATTCCACGTTTCTGTTGGGA 57.350 45.000 0.00 0.00 0.00 4.37
5886 9125 2.103263 CACTGGGGAGACTTACATAGGC 59.897 54.545 0.00 0.00 0.00 3.93
5887 9126 3.133003 CACACTGGGGAGACTTACATAGG 59.867 52.174 0.00 0.00 0.00 2.57
5888 9127 3.769844 ACACACTGGGGAGACTTACATAG 59.230 47.826 0.00 0.00 0.00 2.23
5889 9128 3.513912 CACACACTGGGGAGACTTACATA 59.486 47.826 0.00 0.00 0.00 2.29
5890 9129 2.303022 CACACACTGGGGAGACTTACAT 59.697 50.000 0.00 0.00 0.00 2.29
5891 9130 1.691976 CACACACTGGGGAGACTTACA 59.308 52.381 0.00 0.00 0.00 2.41
5924 9164 6.985188 TGTTGGTATCATCAGTAAAGAAGC 57.015 37.500 0.00 0.00 0.00 3.86
5948 9190 6.294453 CCACTGGCAGACATAAATGTGTTAAA 60.294 38.462 23.66 0.00 41.95 1.52
5991 9233 0.030369 GGGTCGCCATACGTACTGAG 59.970 60.000 0.00 0.00 44.19 3.35
5996 9238 1.829533 GGGAGGGTCGCCATACGTA 60.830 63.158 0.00 0.00 44.19 3.57
5998 9240 2.838225 AGGGAGGGTCGCCATACG 60.838 66.667 0.00 0.00 45.62 3.06
6000 9242 2.520982 CGAGGGAGGGTCGCCATA 60.521 66.667 0.00 0.00 0.00 2.74
6013 9265 2.184579 GACCTCCGGCTTTCGAGG 59.815 66.667 0.00 0.00 42.43 4.63
6035 9287 6.075046 GCAAAACAGGTTGTACGAAGAAATTC 60.075 38.462 0.00 0.00 0.00 2.17
6075 9328 5.931724 CAGACATGTGATGTTTGGTAGTACA 59.068 40.000 1.15 0.00 45.03 2.90
6153 9409 1.221466 CGTTCCTTCAAGCGACTGCA 61.221 55.000 0.00 0.00 46.23 4.41
6154 9410 1.493311 CGTTCCTTCAAGCGACTGC 59.507 57.895 0.00 0.00 43.24 4.40
6164 9421 2.450609 TACTGTTCCAGCGTTCCTTC 57.549 50.000 0.00 0.00 34.37 3.46
6188 9445 8.311836 TCGAACAGAATAGACAAAACTAGGATT 58.688 33.333 0.00 0.00 0.00 3.01
6200 9457 9.615295 GATAGGAGTAAATCGAACAGAATAGAC 57.385 37.037 0.00 0.00 0.00 2.59
6231 9488 5.982391 TGGATTGGAGGGAATACTAGATCT 58.018 41.667 0.00 0.00 0.00 2.75
6241 9498 6.728164 TGACAATTAATTTGGATTGGAGGGAA 59.272 34.615 0.00 0.00 39.80 3.97
6242 9499 6.154363 GTGACAATTAATTTGGATTGGAGGGA 59.846 38.462 0.00 0.00 39.80 4.20
6243 9500 6.340522 GTGACAATTAATTTGGATTGGAGGG 58.659 40.000 0.00 0.00 39.80 4.30
6244 9501 6.035843 CGTGACAATTAATTTGGATTGGAGG 58.964 40.000 0.00 0.00 39.80 4.30
6245 9502 6.035843 CCGTGACAATTAATTTGGATTGGAG 58.964 40.000 0.00 0.00 39.80 3.86
6246 9503 5.623368 GCCGTGACAATTAATTTGGATTGGA 60.623 40.000 0.00 0.00 39.80 3.53
6247 9504 4.566360 GCCGTGACAATTAATTTGGATTGG 59.434 41.667 0.00 0.00 39.80 3.16
6248 9505 5.410067 AGCCGTGACAATTAATTTGGATTG 58.590 37.500 0.00 7.11 39.80 2.67
6249 9506 5.659440 AGCCGTGACAATTAATTTGGATT 57.341 34.783 0.00 0.00 39.80 3.01
6250 9507 5.659440 AAGCCGTGACAATTAATTTGGAT 57.341 34.783 0.00 0.00 39.80 3.41
6251 9508 5.461032 AAAGCCGTGACAATTAATTTGGA 57.539 34.783 0.00 0.00 39.80 3.53
6252 9509 6.386654 ACTAAAGCCGTGACAATTAATTTGG 58.613 36.000 0.00 0.00 39.80 3.28
6253 9510 8.018520 TGTACTAAAGCCGTGACAATTAATTTG 58.981 33.333 0.00 0.00 41.36 2.32
6254 9511 8.101654 TGTACTAAAGCCGTGACAATTAATTT 57.898 30.769 0.00 0.00 0.00 1.82
6255 9512 7.675962 TGTACTAAAGCCGTGACAATTAATT 57.324 32.000 0.00 0.00 0.00 1.40
6256 9513 7.389607 AGTTGTACTAAAGCCGTGACAATTAAT 59.610 33.333 0.00 0.00 0.00 1.40
6257 9514 6.707161 AGTTGTACTAAAGCCGTGACAATTAA 59.293 34.615 0.00 0.00 0.00 1.40
6258 9515 6.225318 AGTTGTACTAAAGCCGTGACAATTA 58.775 36.000 0.00 0.00 0.00 1.40
6259 9516 5.061179 AGTTGTACTAAAGCCGTGACAATT 58.939 37.500 0.00 0.00 0.00 2.32
6260 9517 4.638304 AGTTGTACTAAAGCCGTGACAAT 58.362 39.130 0.00 0.00 0.00 2.71
6261 9518 4.062677 AGTTGTACTAAAGCCGTGACAA 57.937 40.909 0.00 0.00 0.00 3.18
6262 9519 3.738830 AGTTGTACTAAAGCCGTGACA 57.261 42.857 0.00 0.00 0.00 3.58
6263 9520 6.716898 ATTAAGTTGTACTAAAGCCGTGAC 57.283 37.500 0.00 0.00 0.00 3.67
6264 9521 8.036575 ACATATTAAGTTGTACTAAAGCCGTGA 58.963 33.333 0.00 0.00 0.00 4.35
6265 9522 8.193250 ACATATTAAGTTGTACTAAAGCCGTG 57.807 34.615 0.00 0.00 0.00 4.94
6266 9523 8.782339 AACATATTAAGTTGTACTAAAGCCGT 57.218 30.769 0.00 0.00 0.00 5.68
6267 9524 9.698617 GAAACATATTAAGTTGTACTAAAGCCG 57.301 33.333 0.00 0.00 0.00 5.52
6284 9541 8.534496 CCCAGAAGAATTTTCCAGAAACATATT 58.466 33.333 0.00 0.00 0.00 1.28
6285 9542 7.364144 GCCCAGAAGAATTTTCCAGAAACATAT 60.364 37.037 0.00 0.00 0.00 1.78
6321 9671 7.508977 TCCTGAACTAAATTTGGGTCTCATTTT 59.491 33.333 18.95 0.00 0.00 1.82
6395 9745 0.806868 ACAAAGGTCATGCTCATGCG 59.193 50.000 5.04 0.00 43.34 4.73
6421 9783 6.329496 ACGATGCCACCAATAAAGTATTTTG 58.671 36.000 0.00 0.00 40.09 2.44
6448 9815 1.129998 CCTTTCTGAAGCTGCACGATG 59.870 52.381 1.02 0.00 0.00 3.84
6458 9825 2.749621 CCATTCCCGTTCCTTTCTGAAG 59.250 50.000 0.00 0.00 0.00 3.02
6493 9860 0.872021 CTCGTGCTAATCCGCAGACC 60.872 60.000 0.00 0.00 41.21 3.85
6500 9867 1.009829 CAGCCAACTCGTGCTAATCC 58.990 55.000 0.00 0.00 35.69 3.01
6598 9965 5.047847 TGACTGGATTAAATCGATCGAACC 58.952 41.667 23.50 17.16 0.00 3.62
6629 9996 3.315749 GGTTGGATTGTAACGAAACACCA 59.684 43.478 0.00 0.00 0.00 4.17
6708 10076 6.463995 AAAATCCTACAACAGCAAGAAACA 57.536 33.333 0.00 0.00 0.00 2.83
6734 10108 4.993705 AACTGAATCCAACAACTCCCTA 57.006 40.909 0.00 0.00 0.00 3.53
6766 10140 2.193993 GGAGGGCTAGGAGGTTTAACA 58.806 52.381 0.00 0.00 0.00 2.41
6767 10141 1.489649 GGGAGGGCTAGGAGGTTTAAC 59.510 57.143 0.00 0.00 0.00 2.01
6768 10142 1.889174 GGGAGGGCTAGGAGGTTTAA 58.111 55.000 0.00 0.00 0.00 1.52
6797 10171 2.838813 GGTGTTAGGGCTAGGAGTTCTT 59.161 50.000 0.00 0.00 0.00 2.52
6798 10172 2.468915 GGTGTTAGGGCTAGGAGTTCT 58.531 52.381 0.00 0.00 0.00 3.01
6799 10173 1.485480 GGGTGTTAGGGCTAGGAGTTC 59.515 57.143 0.00 0.00 0.00 3.01
6800 10174 1.080666 AGGGTGTTAGGGCTAGGAGTT 59.919 52.381 0.00 0.00 0.00 3.01
6801 10175 0.717196 AGGGTGTTAGGGCTAGGAGT 59.283 55.000 0.00 0.00 0.00 3.85
6824 10198 6.042093 CAGGGTATTTGCTAGAGATGTCCTAA 59.958 42.308 0.00 0.00 0.00 2.69
6826 10200 4.346418 CAGGGTATTTGCTAGAGATGTCCT 59.654 45.833 0.00 0.00 0.00 3.85
6838 10212 6.928492 TCAATTTTGAGTTTCAGGGTATTTGC 59.072 34.615 0.00 0.00 32.50 3.68
6855 10229 8.767478 AATATCACTTTTGCTCCTCAATTTTG 57.233 30.769 0.00 0.00 34.12 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.