Multiple sequence alignment - TraesCS3D01G360200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G360200 chr3D 100.000 4115 0 0 1 4115 473820744 473824858 0.000000e+00 7600.0
1 TraesCS3D01G360200 chr3B 94.248 3147 126 22 848 3958 630297044 630300171 0.000000e+00 4758.0
2 TraesCS3D01G360200 chr3B 89.441 161 17 0 6 166 27201286 27201446 1.940000e-48 204.0
3 TraesCS3D01G360200 chr3A 93.528 3152 128 30 849 3958 616279612 616282729 0.000000e+00 4621.0
4 TraesCS3D01G360200 chr3A 92.000 125 10 0 41 165 39708286 39708410 4.230000e-40 176.0
5 TraesCS3D01G360200 chr5B 87.770 556 49 9 228 773 99735140 99734594 2.090000e-177 632.0
6 TraesCS3D01G360200 chr5B 85.996 557 40 12 228 773 99382084 99381555 2.780000e-156 562.0
7 TraesCS3D01G360200 chr5B 87.532 393 29 11 463 855 482322335 482322707 1.760000e-118 436.0
8 TraesCS3D01G360200 chr5B 92.473 186 13 1 229 413 482322149 482322334 8.770000e-67 265.0
9 TraesCS3D01G360200 chr5B 86.145 166 22 1 691 855 486034274 486034439 1.180000e-40 178.0
10 TraesCS3D01G360200 chr6D 85.079 630 39 23 229 855 74905382 74904805 3.540000e-165 592.0
11 TraesCS3D01G360200 chr7D 91.176 306 11 6 555 855 151699629 151699923 6.410000e-108 401.0
12 TraesCS3D01G360200 chr7D 81.108 397 37 16 497 855 501394292 501394688 2.420000e-72 283.0
13 TraesCS3D01G360200 chr7D 95.082 61 3 0 560 620 113982099 113982159 3.390000e-16 97.1
14 TraesCS3D01G360200 chr1D 98.171 164 2 1 1 164 328452805 328452967 6.730000e-73 285.0
15 TraesCS3D01G360200 chr6B 90.909 176 16 0 229 404 341543031 341543206 1.910000e-58 237.0
16 TraesCS3D01G360200 chr4A 89.714 175 18 0 230 404 29016223 29016397 1.490000e-54 224.0
17 TraesCS3D01G360200 chr5D 89.655 174 18 0 231 404 189244279 189244452 5.350000e-54 222.0
18 TraesCS3D01G360200 chr5D 83.511 188 25 4 674 855 77058447 77058260 1.970000e-38 171.0
19 TraesCS3D01G360200 chr4D 90.000 170 16 1 229 397 139346125 139346294 6.930000e-53 219.0
20 TraesCS3D01G360200 chr4D 87.709 179 21 1 227 404 14645882 14646060 1.500000e-49 207.0
21 TraesCS3D01G360200 chr4D 86.339 183 23 2 674 855 503264780 503264599 9.020000e-47 198.0
22 TraesCS3D01G360200 chr1B 90.385 156 15 0 6 161 264013613 264013768 5.390000e-49 206.0
23 TraesCS3D01G360200 chr1B 86.503 163 21 1 694 855 200648908 200648746 1.180000e-40 178.0
24 TraesCS3D01G360200 chr2B 93.600 125 8 0 41 165 24204200 24204076 1.950000e-43 187.0
25 TraesCS3D01G360200 chr4B 87.421 159 19 1 6 164 386025221 386025378 9.090000e-42 182.0
26 TraesCS3D01G360200 chr7A 96.774 31 1 0 611 641 365106685 365106655 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G360200 chr3D 473820744 473824858 4114 False 7600.0 7600 100.0000 1 4115 1 chr3D.!!$F1 4114
1 TraesCS3D01G360200 chr3B 630297044 630300171 3127 False 4758.0 4758 94.2480 848 3958 1 chr3B.!!$F2 3110
2 TraesCS3D01G360200 chr3A 616279612 616282729 3117 False 4621.0 4621 93.5280 849 3958 1 chr3A.!!$F2 3109
3 TraesCS3D01G360200 chr5B 99734594 99735140 546 True 632.0 632 87.7700 228 773 1 chr5B.!!$R2 545
4 TraesCS3D01G360200 chr5B 99381555 99382084 529 True 562.0 562 85.9960 228 773 1 chr5B.!!$R1 545
5 TraesCS3D01G360200 chr5B 482322149 482322707 558 False 350.5 436 90.0025 229 855 2 chr5B.!!$F2 626
6 TraesCS3D01G360200 chr6D 74904805 74905382 577 True 592.0 592 85.0790 229 855 1 chr6D.!!$R1 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.036010 ACACTTCCTGGCAATCTCGG 60.036 55.000 0.00 0.0 0.00 4.63 F
81 82 0.036010 CACTTCCTGGCAATCTCGGT 60.036 55.000 0.00 0.0 0.00 4.69 F
82 83 0.036010 ACTTCCTGGCAATCTCGGTG 60.036 55.000 0.00 0.0 0.00 4.94 F
84 85 0.036388 TTCCTGGCAATCTCGGTGAC 60.036 55.000 0.00 0.0 0.00 3.67 F
177 178 0.037975 TTACTCGGCCCAGTCGTTTC 60.038 55.000 6.18 0.0 30.45 2.78 F
197 198 0.244178 AGAACTTTCCTCTCGTCCGC 59.756 55.000 0.00 0.0 0.00 5.54 F
198 199 0.736672 GAACTTTCCTCTCGTCCGCC 60.737 60.000 0.00 0.0 0.00 6.13 F
222 223 1.106285 CCCTATTCTTTGGCACTGGC 58.894 55.000 0.00 0.0 40.13 4.85 F
1793 1836 1.151450 CTGGTGCAAGACCCAACCT 59.849 57.895 0.00 0.0 45.45 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1793 1836 2.093500 AGCATCGCATTGTAAGTGGAGA 60.093 45.455 0.0 0.0 0.00 3.71 R
1856 1899 2.290577 GCAATCATCCTCTCCCATACCC 60.291 54.545 0.0 0.0 0.00 3.69 R
2125 2168 1.428912 ACCATCAAAGAGCCCCTTCAA 59.571 47.619 0.0 0.0 33.02 2.69 R
2311 2354 7.494952 CACGGATGAATATGAGAATGCATCTAT 59.505 37.037 0.0 0.0 40.50 1.98 R
2343 2386 1.379044 CCCATCCTTGCACAGTCCC 60.379 63.158 0.0 0.0 0.00 4.46 R
2408 2451 7.611467 TGTAAATATGAGGATTCAGTTTGCAGT 59.389 33.333 0.0 0.0 35.10 4.40 R
2469 2512 9.424319 CCGTATATTCTTACAGCATCACTAAAT 57.576 33.333 0.0 0.0 0.00 1.40 R
2679 2722 0.964358 GAGCAAGGGCAGCATCAACT 60.964 55.000 0.0 0.0 44.61 3.16 R
3497 3542 0.037790 AAGAGACGAGCAAGGACAGC 60.038 55.000 0.0 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.539152 GTGTTTGCCACATCAGCG 57.461 55.556 0.00 0.00 43.92 5.18
25 26 1.948508 GTGTTTGCCACATCAGCGA 59.051 52.632 0.00 0.00 43.92 4.93
26 27 0.310543 GTGTTTGCCACATCAGCGAA 59.689 50.000 0.00 0.00 43.92 4.70
27 28 1.028130 TGTTTGCCACATCAGCGAAA 58.972 45.000 0.00 0.00 35.43 3.46
28 29 1.612950 TGTTTGCCACATCAGCGAAAT 59.387 42.857 0.00 0.00 35.43 2.17
29 30 2.816672 TGTTTGCCACATCAGCGAAATA 59.183 40.909 0.00 0.00 35.43 1.40
30 31 3.171277 GTTTGCCACATCAGCGAAATAC 58.829 45.455 0.00 0.00 35.43 1.89
31 32 2.106477 TGCCACATCAGCGAAATACA 57.894 45.000 0.00 0.00 0.00 2.29
32 33 2.642427 TGCCACATCAGCGAAATACAT 58.358 42.857 0.00 0.00 0.00 2.29
33 34 2.613595 TGCCACATCAGCGAAATACATC 59.386 45.455 0.00 0.00 0.00 3.06
34 35 2.348872 GCCACATCAGCGAAATACATCG 60.349 50.000 0.00 0.00 45.41 3.84
35 36 3.123050 CCACATCAGCGAAATACATCGA 58.877 45.455 0.24 0.00 45.48 3.59
36 37 3.555547 CCACATCAGCGAAATACATCGAA 59.444 43.478 0.24 0.00 45.48 3.71
37 38 4.212004 CCACATCAGCGAAATACATCGAAT 59.788 41.667 0.24 0.00 45.48 3.34
38 39 5.405269 CCACATCAGCGAAATACATCGAATA 59.595 40.000 0.24 0.00 45.48 1.75
39 40 6.091305 CCACATCAGCGAAATACATCGAATAT 59.909 38.462 0.24 0.00 45.48 1.28
40 41 6.952083 CACATCAGCGAAATACATCGAATATG 59.048 38.462 0.24 3.21 45.48 1.78
41 42 6.091305 ACATCAGCGAAATACATCGAATATGG 59.909 38.462 0.24 0.00 45.48 2.74
42 43 5.538118 TCAGCGAAATACATCGAATATGGT 58.462 37.500 0.24 0.00 45.48 3.55
43 44 5.989168 TCAGCGAAATACATCGAATATGGTT 59.011 36.000 0.24 0.00 45.48 3.67
44 45 6.145534 TCAGCGAAATACATCGAATATGGTTC 59.854 38.462 0.24 0.00 45.48 3.62
45 46 6.146184 CAGCGAAATACATCGAATATGGTTCT 59.854 38.462 0.24 0.00 45.48 3.01
46 47 6.146184 AGCGAAATACATCGAATATGGTTCTG 59.854 38.462 0.24 0.00 45.48 3.02
47 48 6.618592 GCGAAATACATCGAATATGGTTCTGG 60.619 42.308 0.24 0.00 45.48 3.86
48 49 6.423905 CGAAATACATCGAATATGGTTCTGGT 59.576 38.462 0.00 0.00 45.48 4.00
49 50 7.496529 AAATACATCGAATATGGTTCTGGTG 57.503 36.000 0.00 0.00 0.00 4.17
50 51 4.753516 ACATCGAATATGGTTCTGGTGA 57.246 40.909 0.00 0.00 0.00 4.02
51 52 4.442706 ACATCGAATATGGTTCTGGTGAC 58.557 43.478 0.00 0.00 0.00 3.67
52 53 3.536956 TCGAATATGGTTCTGGTGACC 57.463 47.619 0.00 0.00 0.00 4.02
53 54 2.159156 TCGAATATGGTTCTGGTGACCG 60.159 50.000 0.00 0.00 0.00 4.79
54 55 2.418197 CGAATATGGTTCTGGTGACCGT 60.418 50.000 0.00 0.00 0.00 4.83
55 56 3.181484 CGAATATGGTTCTGGTGACCGTA 60.181 47.826 0.00 0.00 0.00 4.02
56 57 4.369182 GAATATGGTTCTGGTGACCGTAG 58.631 47.826 0.00 0.00 0.00 3.51
57 58 1.933021 ATGGTTCTGGTGACCGTAGA 58.067 50.000 0.00 0.00 0.00 2.59
58 59 1.254026 TGGTTCTGGTGACCGTAGAG 58.746 55.000 0.00 0.00 0.00 2.43
59 60 1.254954 GGTTCTGGTGACCGTAGAGT 58.745 55.000 0.00 0.00 0.00 3.24
60 61 1.067776 GGTTCTGGTGACCGTAGAGTG 60.068 57.143 0.00 0.00 0.00 3.51
61 62 1.884579 GTTCTGGTGACCGTAGAGTGA 59.115 52.381 0.00 0.00 0.00 3.41
62 63 1.531423 TCTGGTGACCGTAGAGTGAC 58.469 55.000 0.00 0.00 0.00 3.67
63 64 1.202842 TCTGGTGACCGTAGAGTGACA 60.203 52.381 0.00 0.00 0.00 3.58
64 65 0.956633 TGGTGACCGTAGAGTGACAC 59.043 55.000 0.00 0.00 0.00 3.67
65 66 1.245732 GGTGACCGTAGAGTGACACT 58.754 55.000 8.12 8.12 0.00 3.55
66 67 1.612463 GGTGACCGTAGAGTGACACTT 59.388 52.381 10.01 2.76 0.00 3.16
67 68 2.351544 GGTGACCGTAGAGTGACACTTC 60.352 54.545 10.01 2.66 0.00 3.01
68 69 1.884579 TGACCGTAGAGTGACACTTCC 59.115 52.381 10.01 0.00 0.00 3.46
69 70 2.161030 GACCGTAGAGTGACACTTCCT 58.839 52.381 10.01 5.81 0.00 3.36
70 71 1.887198 ACCGTAGAGTGACACTTCCTG 59.113 52.381 10.01 1.01 0.00 3.86
71 72 1.202582 CCGTAGAGTGACACTTCCTGG 59.797 57.143 10.01 6.53 0.00 4.45
72 73 1.402984 CGTAGAGTGACACTTCCTGGC 60.403 57.143 10.01 0.00 0.00 4.85
73 74 1.618837 GTAGAGTGACACTTCCTGGCA 59.381 52.381 10.01 0.00 34.41 4.92
74 75 1.131638 AGAGTGACACTTCCTGGCAA 58.868 50.000 10.01 0.00 40.76 4.52
75 76 1.701847 AGAGTGACACTTCCTGGCAAT 59.298 47.619 10.01 0.00 40.76 3.56
76 77 2.079925 GAGTGACACTTCCTGGCAATC 58.920 52.381 10.01 0.00 45.46 2.67
77 78 1.701847 AGTGACACTTCCTGGCAATCT 59.298 47.619 1.07 0.00 40.76 2.40
78 79 2.079925 GTGACACTTCCTGGCAATCTC 58.920 52.381 0.00 0.00 40.76 2.75
79 80 1.338105 TGACACTTCCTGGCAATCTCG 60.338 52.381 0.00 0.00 33.56 4.04
80 81 0.036010 ACACTTCCTGGCAATCTCGG 60.036 55.000 0.00 0.00 0.00 4.63
81 82 0.036010 CACTTCCTGGCAATCTCGGT 60.036 55.000 0.00 0.00 0.00 4.69
82 83 0.036010 ACTTCCTGGCAATCTCGGTG 60.036 55.000 0.00 0.00 0.00 4.94
83 84 0.250234 CTTCCTGGCAATCTCGGTGA 59.750 55.000 0.00 0.00 0.00 4.02
84 85 0.036388 TTCCTGGCAATCTCGGTGAC 60.036 55.000 0.00 0.00 0.00 3.67
85 86 1.450312 CCTGGCAATCTCGGTGACC 60.450 63.158 0.00 0.00 0.00 4.02
97 98 2.088950 CGGTGACCGTATTTTGACCT 57.911 50.000 17.28 0.00 42.73 3.85
98 99 2.419667 CGGTGACCGTATTTTGACCTT 58.580 47.619 17.28 0.00 42.73 3.50
99 100 2.809696 CGGTGACCGTATTTTGACCTTT 59.190 45.455 17.28 0.00 42.73 3.11
100 101 3.120442 CGGTGACCGTATTTTGACCTTTC 60.120 47.826 17.28 0.00 42.73 2.62
101 102 3.189910 GGTGACCGTATTTTGACCTTTCC 59.810 47.826 0.00 0.00 0.00 3.13
102 103 4.070009 GTGACCGTATTTTGACCTTTCCT 58.930 43.478 0.00 0.00 0.00 3.36
103 104 4.069304 TGACCGTATTTTGACCTTTCCTG 58.931 43.478 0.00 0.00 0.00 3.86
104 105 4.202377 TGACCGTATTTTGACCTTTCCTGA 60.202 41.667 0.00 0.00 0.00 3.86
105 106 4.721132 ACCGTATTTTGACCTTTCCTGAA 58.279 39.130 0.00 0.00 0.00 3.02
106 107 5.321927 ACCGTATTTTGACCTTTCCTGAAT 58.678 37.500 0.00 0.00 0.00 2.57
107 108 6.478129 ACCGTATTTTGACCTTTCCTGAATA 58.522 36.000 0.00 0.00 0.00 1.75
108 109 6.373495 ACCGTATTTTGACCTTTCCTGAATAC 59.627 38.462 0.00 0.00 0.00 1.89
109 110 6.373216 CCGTATTTTGACCTTTCCTGAATACA 59.627 38.462 0.00 0.00 31.40 2.29
110 111 7.414098 CCGTATTTTGACCTTTCCTGAATACAG 60.414 40.741 0.00 0.00 43.12 2.74
111 112 7.119262 CGTATTTTGACCTTTCCTGAATACAGT 59.881 37.037 0.00 0.00 42.05 3.55
112 113 6.633500 TTTTGACCTTTCCTGAATACAGTG 57.367 37.500 0.00 0.00 42.05 3.66
113 114 5.560722 TTGACCTTTCCTGAATACAGTGA 57.439 39.130 0.00 0.00 42.05 3.41
114 115 4.894784 TGACCTTTCCTGAATACAGTGAC 58.105 43.478 0.00 0.00 42.05 3.67
115 116 4.254492 GACCTTTCCTGAATACAGTGACC 58.746 47.826 0.00 0.00 42.05 4.02
116 117 3.650942 ACCTTTCCTGAATACAGTGACCA 59.349 43.478 0.00 0.00 42.05 4.02
117 118 4.104102 ACCTTTCCTGAATACAGTGACCAA 59.896 41.667 0.00 0.00 42.05 3.67
118 119 5.070001 CCTTTCCTGAATACAGTGACCAAA 58.930 41.667 0.00 0.00 42.05 3.28
119 120 5.711976 CCTTTCCTGAATACAGTGACCAAAT 59.288 40.000 0.00 0.00 42.05 2.32
120 121 6.209391 CCTTTCCTGAATACAGTGACCAAATT 59.791 38.462 0.00 0.00 42.05 1.82
121 122 6.573664 TTCCTGAATACAGTGACCAAATTG 57.426 37.500 0.00 0.00 42.05 2.32
122 123 5.875224 TCCTGAATACAGTGACCAAATTGA 58.125 37.500 0.00 0.00 42.05 2.57
123 124 6.303054 TCCTGAATACAGTGACCAAATTGAA 58.697 36.000 0.00 0.00 42.05 2.69
124 125 6.206634 TCCTGAATACAGTGACCAAATTGAAC 59.793 38.462 0.00 0.00 42.05 3.18
125 126 6.325919 TGAATACAGTGACCAAATTGAACC 57.674 37.500 0.00 0.00 0.00 3.62
126 127 5.242838 TGAATACAGTGACCAAATTGAACCC 59.757 40.000 0.00 0.00 0.00 4.11
127 128 3.312736 ACAGTGACCAAATTGAACCCT 57.687 42.857 0.00 0.00 0.00 4.34
128 129 4.447138 ACAGTGACCAAATTGAACCCTA 57.553 40.909 0.00 0.00 0.00 3.53
129 130 4.398319 ACAGTGACCAAATTGAACCCTAG 58.602 43.478 0.00 0.00 0.00 3.02
130 131 3.758554 CAGTGACCAAATTGAACCCTAGG 59.241 47.826 0.06 0.06 0.00 3.02
131 132 3.655777 AGTGACCAAATTGAACCCTAGGA 59.344 43.478 11.48 0.00 0.00 2.94
132 133 4.292306 AGTGACCAAATTGAACCCTAGGAT 59.708 41.667 11.48 0.00 0.00 3.24
133 134 4.640647 GTGACCAAATTGAACCCTAGGATC 59.359 45.833 11.48 8.98 0.00 3.36
134 135 4.290985 TGACCAAATTGAACCCTAGGATCA 59.709 41.667 11.48 11.71 32.70 2.92
135 136 5.222233 TGACCAAATTGAACCCTAGGATCAA 60.222 40.000 23.78 23.78 45.78 2.57
136 137 5.650283 ACCAAATTGAACCCTAGGATCAAA 58.350 37.500 24.75 13.87 45.09 2.69
137 138 6.263754 ACCAAATTGAACCCTAGGATCAAAT 58.736 36.000 24.75 17.82 45.09 2.32
138 139 6.730507 ACCAAATTGAACCCTAGGATCAAATT 59.269 34.615 24.75 21.21 45.09 1.82
139 140 7.043565 CCAAATTGAACCCTAGGATCAAATTG 58.956 38.462 29.15 29.15 45.97 2.32
141 142 7.651027 AATTGAACCCTAGGATCAAATTGAG 57.349 36.000 24.75 3.97 45.09 3.02
142 143 6.387192 TTGAACCCTAGGATCAAATTGAGA 57.613 37.500 21.03 4.00 40.59 3.27
143 144 6.581388 TGAACCCTAGGATCAAATTGAGAT 57.419 37.500 11.48 0.00 31.63 2.75
144 145 7.690454 TGAACCCTAGGATCAAATTGAGATA 57.310 36.000 11.48 0.00 31.63 1.98
145 146 7.509546 TGAACCCTAGGATCAAATTGAGATAC 58.490 38.462 11.48 0.00 31.63 2.24
146 147 7.348274 TGAACCCTAGGATCAAATTGAGATACT 59.652 37.037 11.48 9.97 39.86 2.12
147 148 8.798975 AACCCTAGGATCAAATTGAGATACTA 57.201 34.615 11.48 10.91 37.77 1.82
148 149 8.980832 ACCCTAGGATCAAATTGAGATACTAT 57.019 34.615 11.48 0.00 38.05 2.12
167 168 9.733219 GATACTATAGATGTAATTTACTCGGCC 57.267 37.037 6.78 0.00 0.00 6.13
168 169 6.932947 ACTATAGATGTAATTTACTCGGCCC 58.067 40.000 6.78 0.00 0.00 5.80
169 170 5.818678 ATAGATGTAATTTACTCGGCCCA 57.181 39.130 7.99 0.00 0.00 5.36
170 171 4.073293 AGATGTAATTTACTCGGCCCAG 57.927 45.455 7.99 0.00 0.00 4.45
171 172 3.454812 AGATGTAATTTACTCGGCCCAGT 59.545 43.478 8.48 8.48 0.00 4.00
172 173 3.255969 TGTAATTTACTCGGCCCAGTC 57.744 47.619 6.18 0.00 0.00 3.51
173 174 2.199236 GTAATTTACTCGGCCCAGTCG 58.801 52.381 6.18 0.00 0.00 4.18
174 175 0.611714 AATTTACTCGGCCCAGTCGT 59.388 50.000 6.18 0.00 30.45 4.34
175 176 0.611714 ATTTACTCGGCCCAGTCGTT 59.388 50.000 6.18 0.00 30.45 3.85
176 177 0.393820 TTTACTCGGCCCAGTCGTTT 59.606 50.000 6.18 0.00 30.45 3.60
177 178 0.037975 TTACTCGGCCCAGTCGTTTC 60.038 55.000 6.18 0.00 30.45 2.78
178 179 1.180456 TACTCGGCCCAGTCGTTTCA 61.180 55.000 6.18 0.00 30.45 2.69
179 180 1.738099 CTCGGCCCAGTCGTTTCAG 60.738 63.158 0.00 0.00 30.45 3.02
180 181 2.154798 CTCGGCCCAGTCGTTTCAGA 62.155 60.000 0.00 0.00 30.45 3.27
181 182 1.301401 CGGCCCAGTCGTTTCAGAA 60.301 57.895 0.00 0.00 0.00 3.02
182 183 1.566018 CGGCCCAGTCGTTTCAGAAC 61.566 60.000 0.00 0.00 0.00 3.01
183 184 0.250338 GGCCCAGTCGTTTCAGAACT 60.250 55.000 0.00 0.00 33.51 3.01
184 185 1.594331 GCCCAGTCGTTTCAGAACTT 58.406 50.000 0.00 0.00 33.51 2.66
185 186 1.947456 GCCCAGTCGTTTCAGAACTTT 59.053 47.619 0.00 0.00 33.51 2.66
186 187 2.031944 GCCCAGTCGTTTCAGAACTTTC 60.032 50.000 0.00 0.00 33.51 2.62
187 188 2.548480 CCCAGTCGTTTCAGAACTTTCC 59.452 50.000 0.00 0.00 33.51 3.13
188 189 3.467803 CCAGTCGTTTCAGAACTTTCCT 58.532 45.455 0.00 0.00 33.51 3.36
189 190 3.495001 CCAGTCGTTTCAGAACTTTCCTC 59.505 47.826 0.00 0.00 33.51 3.71
190 191 4.372656 CAGTCGTTTCAGAACTTTCCTCT 58.627 43.478 0.00 0.00 33.51 3.69
191 192 4.446051 CAGTCGTTTCAGAACTTTCCTCTC 59.554 45.833 0.00 0.00 33.51 3.20
192 193 3.425858 GTCGTTTCAGAACTTTCCTCTCG 59.574 47.826 0.00 0.00 33.51 4.04
193 194 3.067742 TCGTTTCAGAACTTTCCTCTCGT 59.932 43.478 0.00 0.00 33.51 4.18
194 195 3.425858 CGTTTCAGAACTTTCCTCTCGTC 59.574 47.826 0.00 0.00 33.51 4.20
195 196 3.662247 TTCAGAACTTTCCTCTCGTCC 57.338 47.619 0.00 0.00 0.00 4.79
196 197 1.540267 TCAGAACTTTCCTCTCGTCCG 59.460 52.381 0.00 0.00 0.00 4.79
197 198 0.244178 AGAACTTTCCTCTCGTCCGC 59.756 55.000 0.00 0.00 0.00 5.54
198 199 0.736672 GAACTTTCCTCTCGTCCGCC 60.737 60.000 0.00 0.00 0.00 6.13
199 200 2.168666 AACTTTCCTCTCGTCCGCCC 62.169 60.000 0.00 0.00 0.00 6.13
200 201 3.372554 CTTTCCTCTCGTCCGCCCC 62.373 68.421 0.00 0.00 0.00 5.80
220 221 1.767759 CCCCCTATTCTTTGGCACTG 58.232 55.000 0.00 0.00 0.00 3.66
221 222 1.686115 CCCCCTATTCTTTGGCACTGG 60.686 57.143 0.00 0.00 0.00 4.00
222 223 1.106285 CCCTATTCTTTGGCACTGGC 58.894 55.000 0.00 0.00 40.13 4.85
223 224 1.616725 CCCTATTCTTTGGCACTGGCA 60.617 52.381 0.07 0.07 43.71 4.92
224 225 1.747355 CCTATTCTTTGGCACTGGCAG 59.253 52.381 14.16 14.16 43.71 4.85
225 226 1.747355 CTATTCTTTGGCACTGGCAGG 59.253 52.381 20.34 9.00 43.71 4.85
226 227 1.538687 ATTCTTTGGCACTGGCAGGC 61.539 55.000 20.34 18.17 43.71 4.85
303 305 4.758251 CGTCATGGGCTGGCACGA 62.758 66.667 2.88 0.00 32.08 4.35
419 427 2.807045 GTGTCACAGCGAGCGGAG 60.807 66.667 1.67 0.00 0.00 4.63
442 450 4.670221 GCATGCTACTTAAGTGTGCAAGTC 60.670 45.833 28.83 20.27 40.25 3.01
443 451 3.399330 TGCTACTTAAGTGTGCAAGTCC 58.601 45.455 25.50 4.95 36.47 3.85
444 452 2.742589 GCTACTTAAGTGTGCAAGTCCC 59.257 50.000 18.56 0.00 36.44 4.46
445 453 2.271944 ACTTAAGTGTGCAAGTCCCC 57.728 50.000 7.48 0.00 28.88 4.81
451 463 1.497286 AGTGTGCAAGTCCCCCTAAAA 59.503 47.619 0.00 0.00 0.00 1.52
452 464 2.091555 AGTGTGCAAGTCCCCCTAAAAA 60.092 45.455 0.00 0.00 0.00 1.94
521 534 6.961576 TGCTGTTACGTGCTACTTTTAAATT 58.038 32.000 0.00 0.00 0.00 1.82
600 613 1.519234 GCATCGATGTGCCTCGTGA 60.519 57.895 25.47 0.00 39.18 4.35
811 827 2.043980 CGTGCCTGGCCCGTTTAAT 61.044 57.895 17.53 0.00 0.00 1.40
896 913 3.645212 TCATGAATGAGCCAACCCAAAAA 59.355 39.130 0.00 0.00 32.11 1.94
1009 1031 3.958147 CTCAACCCGATGCCGCAGT 62.958 63.158 0.00 0.00 0.00 4.40
1114 1157 2.752238 ACCTGGAGCTCCTCGTCG 60.752 66.667 32.28 16.88 36.82 5.12
1352 1395 2.348998 CTTCCTCGGCTGCAACCT 59.651 61.111 4.31 0.00 0.00 3.50
1437 1480 2.047179 GCCTTCTTCGCGTCCCTT 60.047 61.111 5.77 0.00 0.00 3.95
1478 1521 2.755469 CATTGCCCCCAACCTCCG 60.755 66.667 0.00 0.00 32.95 4.63
1561 1604 2.907897 CTTCGATTCCCTTCGCCGCT 62.908 60.000 0.00 0.00 38.97 5.52
1785 1828 1.552337 GTGAGAGATCCTGGTGCAAGA 59.448 52.381 0.00 0.00 0.00 3.02
1793 1836 1.151450 CTGGTGCAAGACCCAACCT 59.849 57.895 0.00 0.00 45.45 3.50
1856 1899 1.378119 GGTTTAAGGAGGCGGGTGG 60.378 63.158 0.00 0.00 0.00 4.61
2335 2378 8.434733 AATAGATGCATTCTCATATTCATCCG 57.565 34.615 0.00 0.00 35.79 4.18
2343 2386 7.201591 GCATTCTCATATTCATCCGTGATAAGG 60.202 40.741 0.00 0.00 33.56 2.69
2370 2413 2.703007 GTGCAAGGATGGGAGACTAGAT 59.297 50.000 0.00 0.00 0.00 1.98
2469 2512 2.041620 AGGGTTCTGCCAAGCATCTAAA 59.958 45.455 0.00 0.00 38.13 1.85
2994 3037 5.755409 TTAAGGGTCTATGCTCTTGTCAA 57.245 39.130 0.00 0.00 30.78 3.18
3168 3211 1.798813 GCCTTAATTCCGCACGATAGG 59.201 52.381 0.00 0.00 43.77 2.57
3172 3215 5.051816 CCTTAATTCCGCACGATAGGTTTA 58.948 41.667 0.00 0.00 43.77 2.01
3174 3217 6.128634 CCTTAATTCCGCACGATAGGTTTATC 60.129 42.308 0.00 0.00 43.77 1.75
3209 3252 9.087424 GCCTATATTTTTCACCTGATTTTGTTC 57.913 33.333 0.00 0.00 0.00 3.18
3263 3307 1.606668 CATGCCAACCGTAGTGTTTGT 59.393 47.619 0.00 0.00 0.00 2.83
3307 3351 8.537728 AGAATTGCAGATTAATCCCAATGTTA 57.462 30.769 22.53 5.57 32.85 2.41
3338 3382 9.502091 TTTCAGTAATACTAACTGCTTTCACAT 57.498 29.630 0.00 0.00 43.30 3.21
3349 3393 2.429971 TGCTTTCACATTTTCACCTGCA 59.570 40.909 0.00 0.00 0.00 4.41
3351 3395 4.280425 TGCTTTCACATTTTCACCTGCATA 59.720 37.500 0.00 0.00 0.00 3.14
3352 3396 5.047164 TGCTTTCACATTTTCACCTGCATAT 60.047 36.000 0.00 0.00 0.00 1.78
3353 3397 5.517770 GCTTTCACATTTTCACCTGCATATC 59.482 40.000 0.00 0.00 0.00 1.63
3400 3444 9.807921 TCTAAGATAAAATGGAACCTTTTGAGT 57.192 29.630 5.67 0.00 0.00 3.41
3401 3445 9.846248 CTAAGATAAAATGGAACCTTTTGAGTG 57.154 33.333 5.67 0.00 0.00 3.51
3402 3446 6.691508 AGATAAAATGGAACCTTTTGAGTGC 58.308 36.000 5.67 0.00 0.00 4.40
3403 3447 4.751767 AAAATGGAACCTTTTGAGTGCA 57.248 36.364 5.67 0.00 0.00 4.57
3404 3448 4.961438 AAATGGAACCTTTTGAGTGCAT 57.039 36.364 0.00 0.00 0.00 3.96
3405 3449 3.947910 ATGGAACCTTTTGAGTGCATG 57.052 42.857 0.00 0.00 0.00 4.06
3406 3450 1.340889 TGGAACCTTTTGAGTGCATGC 59.659 47.619 11.82 11.82 0.00 4.06
3407 3451 1.340889 GGAACCTTTTGAGTGCATGCA 59.659 47.619 18.46 18.46 0.00 3.96
3408 3452 2.028748 GGAACCTTTTGAGTGCATGCAT 60.029 45.455 25.64 12.95 0.00 3.96
3409 3453 3.555586 GGAACCTTTTGAGTGCATGCATT 60.556 43.478 25.64 21.01 0.00 3.56
3410 3454 3.756933 ACCTTTTGAGTGCATGCATTT 57.243 38.095 25.64 15.60 0.00 2.32
3411 3455 4.870123 ACCTTTTGAGTGCATGCATTTA 57.130 36.364 25.64 14.20 0.00 1.40
3412 3456 4.559153 ACCTTTTGAGTGCATGCATTTAC 58.441 39.130 25.64 11.03 0.00 2.01
3426 3470 8.256605 TGCATGCATTTACCAACTAAATAATGT 58.743 29.630 18.46 0.00 33.88 2.71
3427 3471 8.542132 GCATGCATTTACCAACTAAATAATGTG 58.458 33.333 14.21 0.00 33.88 3.21
3443 3487 7.701539 AATAATGTGTGGAAGCACTGAAATA 57.298 32.000 0.00 0.00 39.89 1.40
3470 3514 9.139174 TGCTAAATTTTGTTTCATAAGCTTAGC 57.861 29.630 12.54 6.09 34.44 3.09
3476 3521 5.880054 TGTTTCATAAGCTTAGCTGGTTC 57.120 39.130 7.77 0.00 39.62 3.62
3488 3533 5.607119 TTAGCTGGTTCTTTTGATTCGTC 57.393 39.130 0.00 0.00 0.00 4.20
3497 3542 5.073311 TCTTTTGATTCGTCCAGACTAGG 57.927 43.478 0.00 0.00 0.00 3.02
3508 3553 0.901124 CAGACTAGGCTGTCCTTGCT 59.099 55.000 18.20 0.00 40.66 3.91
3509 3554 1.134848 CAGACTAGGCTGTCCTTGCTC 60.135 57.143 18.20 0.00 40.66 4.26
3541 3589 7.044181 TCTTTCTTCTATGATGCAGTAACCAG 58.956 38.462 0.00 0.00 0.00 4.00
3560 3608 6.691255 ACCAGGGTCAAGTACAATAGTAAA 57.309 37.500 0.00 0.00 30.67 2.01
3561 3609 6.470278 ACCAGGGTCAAGTACAATAGTAAAC 58.530 40.000 0.00 0.00 30.67 2.01
3562 3610 6.271624 ACCAGGGTCAAGTACAATAGTAAACT 59.728 38.462 0.00 0.00 30.67 2.66
3563 3611 6.594159 CCAGGGTCAAGTACAATAGTAAACTG 59.406 42.308 0.00 0.00 30.67 3.16
3564 3612 7.383687 CAGGGTCAAGTACAATAGTAAACTGA 58.616 38.462 0.00 0.00 30.67 3.41
3565 3613 8.041323 CAGGGTCAAGTACAATAGTAAACTGAT 58.959 37.037 0.00 0.00 30.67 2.90
3566 3614 8.041323 AGGGTCAAGTACAATAGTAAACTGATG 58.959 37.037 0.00 0.00 30.67 3.07
3567 3615 8.038944 GGGTCAAGTACAATAGTAAACTGATGA 58.961 37.037 0.00 0.00 30.67 2.92
3568 3616 8.870879 GGTCAAGTACAATAGTAAACTGATGAC 58.129 37.037 0.00 0.00 30.67 3.06
3579 3627 0.912486 ACTGATGACCTAAGTGGGCC 59.088 55.000 0.00 0.00 45.70 5.80
3582 3630 2.771943 CTGATGACCTAAGTGGGCCTAA 59.228 50.000 4.53 0.00 45.70 2.69
3598 3646 6.986231 GTGGGCCTAAAATATTGATTTTCCAG 59.014 38.462 4.53 0.00 42.91 3.86
3609 3657 4.223320 TGATTTTCCAGTTCAGTTTCGC 57.777 40.909 0.00 0.00 0.00 4.70
3615 3663 3.476552 TCCAGTTCAGTTTCGCATCTTT 58.523 40.909 0.00 0.00 0.00 2.52
3616 3664 3.250762 TCCAGTTCAGTTTCGCATCTTTG 59.749 43.478 0.00 0.00 0.00 2.77
3617 3665 2.975851 CAGTTCAGTTTCGCATCTTTGC 59.024 45.455 0.00 0.00 45.78 3.68
3676 3727 3.381045 CATAGTACCATACACGCCACAG 58.619 50.000 0.00 0.00 0.00 3.66
3686 3737 1.486310 ACACGCCACAGATATGGACAT 59.514 47.619 0.00 0.00 43.02 3.06
3688 3739 2.042464 ACGCCACAGATATGGACATCT 58.958 47.619 0.00 0.00 43.02 2.90
3697 3748 7.398618 CCACAGATATGGACATCTAACTCCTAT 59.601 40.741 0.00 0.00 43.02 2.57
3710 3761 7.349412 TCTAACTCCTATAGCTTGAGAAACC 57.651 40.000 10.43 0.00 0.00 3.27
3714 3765 3.126831 CCTATAGCTTGAGAAACCTGCG 58.873 50.000 0.00 0.00 0.00 5.18
3720 3771 1.398390 CTTGAGAAACCTGCGGTATGC 59.602 52.381 0.62 0.00 46.70 3.14
3728 3779 3.274393 CTGCGGTATGCTGGTAGAC 57.726 57.895 0.00 0.00 46.63 2.59
3738 3793 5.698545 GGTATGCTGGTAGACATCTTGAATC 59.301 44.000 0.00 0.00 0.00 2.52
3757 3813 6.689554 TGAATCACAAAAGCTATGCAATTCA 58.310 32.000 17.28 17.28 33.35 2.57
3760 3816 8.638685 AATCACAAAAGCTATGCAATTCATAC 57.361 30.769 0.00 0.00 36.63 2.39
3906 3969 8.152898 TGATATATCCTGTTCAAAGATGACCTG 58.847 37.037 10.25 0.00 34.61 4.00
3916 3979 6.065976 TCAAAGATGACCTGAACATACCAT 57.934 37.500 0.00 0.00 0.00 3.55
3919 3982 2.418368 TGACCTGAACATACCATGCC 57.582 50.000 0.00 0.00 0.00 4.40
3960 4023 3.362040 CCTGAACAATCCAGGCCAA 57.638 52.632 5.01 0.00 43.93 4.52
3961 4024 1.856629 CCTGAACAATCCAGGCCAAT 58.143 50.000 5.01 0.00 43.93 3.16
3962 4025 1.479323 CCTGAACAATCCAGGCCAATG 59.521 52.381 5.01 0.00 43.93 2.82
3963 4026 1.479323 CTGAACAATCCAGGCCAATGG 59.521 52.381 5.01 4.76 42.11 3.16
3970 4033 1.473258 TCCAGGCCAATGGAAATTCG 58.527 50.000 11.25 0.00 46.45 3.34
3971 4034 1.005332 TCCAGGCCAATGGAAATTCGA 59.995 47.619 11.25 0.00 46.45 3.71
3972 4035 1.134946 CCAGGCCAATGGAAATTCGAC 59.865 52.381 5.01 0.00 43.57 4.20
3973 4036 2.094675 CAGGCCAATGGAAATTCGACT 58.905 47.619 5.01 0.00 0.00 4.18
3974 4037 2.098117 CAGGCCAATGGAAATTCGACTC 59.902 50.000 5.01 0.00 0.00 3.36
3975 4038 2.091541 GGCCAATGGAAATTCGACTCA 58.908 47.619 2.05 0.00 0.00 3.41
3976 4039 2.098117 GGCCAATGGAAATTCGACTCAG 59.902 50.000 2.05 0.00 0.00 3.35
3977 4040 3.009723 GCCAATGGAAATTCGACTCAGA 58.990 45.455 2.05 0.00 0.00 3.27
3978 4041 3.064545 GCCAATGGAAATTCGACTCAGAG 59.935 47.826 2.05 0.00 0.00 3.35
3979 4042 4.507710 CCAATGGAAATTCGACTCAGAGA 58.492 43.478 3.79 0.00 0.00 3.10
3980 4043 4.937620 CCAATGGAAATTCGACTCAGAGAA 59.062 41.667 3.79 0.00 0.00 2.87
3981 4044 5.064452 CCAATGGAAATTCGACTCAGAGAAG 59.936 44.000 3.79 0.00 0.00 2.85
3982 4045 3.589988 TGGAAATTCGACTCAGAGAAGC 58.410 45.455 3.79 0.00 0.00 3.86
3983 4046 3.006859 TGGAAATTCGACTCAGAGAAGCA 59.993 43.478 3.79 0.00 0.00 3.91
3984 4047 3.997021 GGAAATTCGACTCAGAGAAGCAA 59.003 43.478 3.79 0.00 0.00 3.91
3985 4048 4.092675 GGAAATTCGACTCAGAGAAGCAAG 59.907 45.833 3.79 0.00 0.00 4.01
3986 4049 2.071688 TTCGACTCAGAGAAGCAAGC 57.928 50.000 3.79 0.00 0.00 4.01
3987 4050 1.252175 TCGACTCAGAGAAGCAAGCT 58.748 50.000 3.79 0.00 0.00 3.74
3988 4051 1.615883 TCGACTCAGAGAAGCAAGCTT 59.384 47.619 7.07 7.07 39.23 3.74
3989 4052 2.036475 TCGACTCAGAGAAGCAAGCTTT 59.964 45.455 8.91 0.00 36.26 3.51
3990 4053 2.411409 CGACTCAGAGAAGCAAGCTTTC 59.589 50.000 8.91 8.43 36.26 2.62
3991 4054 3.663025 GACTCAGAGAAGCAAGCTTTCT 58.337 45.455 8.91 10.35 36.26 2.52
3992 4055 4.617067 CGACTCAGAGAAGCAAGCTTTCTA 60.617 45.833 8.91 3.66 36.26 2.10
3993 4056 4.565022 ACTCAGAGAAGCAAGCTTTCTAC 58.435 43.478 8.91 0.00 36.26 2.59
3994 4057 4.039730 ACTCAGAGAAGCAAGCTTTCTACA 59.960 41.667 8.91 4.12 36.26 2.74
3995 4058 5.157940 TCAGAGAAGCAAGCTTTCTACAT 57.842 39.130 8.91 0.00 36.26 2.29
3996 4059 5.555017 TCAGAGAAGCAAGCTTTCTACATT 58.445 37.500 8.91 0.00 36.26 2.71
3997 4060 6.701340 TCAGAGAAGCAAGCTTTCTACATTA 58.299 36.000 8.91 0.00 36.26 1.90
3998 4061 6.591834 TCAGAGAAGCAAGCTTTCTACATTAC 59.408 38.462 8.91 0.00 36.26 1.89
3999 4062 6.593382 CAGAGAAGCAAGCTTTCTACATTACT 59.407 38.462 8.91 0.00 36.26 2.24
4000 4063 6.816140 AGAGAAGCAAGCTTTCTACATTACTC 59.184 38.462 8.91 7.37 36.26 2.59
4001 4064 6.467677 AGAAGCAAGCTTTCTACATTACTCA 58.532 36.000 8.91 0.00 36.26 3.41
4002 4065 6.370166 AGAAGCAAGCTTTCTACATTACTCAC 59.630 38.462 8.91 0.00 36.26 3.51
4003 4066 4.627467 AGCAAGCTTTCTACATTACTCACG 59.373 41.667 0.00 0.00 0.00 4.35
4004 4067 4.625742 GCAAGCTTTCTACATTACTCACGA 59.374 41.667 0.00 0.00 0.00 4.35
4005 4068 5.220303 GCAAGCTTTCTACATTACTCACGAG 60.220 44.000 0.00 0.00 0.00 4.18
4006 4069 5.000012 AGCTTTCTACATTACTCACGAGG 58.000 43.478 0.00 0.00 0.00 4.63
4007 4070 3.552294 GCTTTCTACATTACTCACGAGGC 59.448 47.826 0.00 0.00 0.00 4.70
4008 4071 4.744570 CTTTCTACATTACTCACGAGGCA 58.255 43.478 0.00 0.00 0.00 4.75
4009 4072 5.339008 TTTCTACATTACTCACGAGGCAT 57.661 39.130 0.00 0.00 0.00 4.40
4010 4073 4.569761 TCTACATTACTCACGAGGCATC 57.430 45.455 0.00 0.00 0.00 3.91
4011 4074 4.207955 TCTACATTACTCACGAGGCATCT 58.792 43.478 0.00 0.00 0.00 2.90
4012 4075 3.444703 ACATTACTCACGAGGCATCTC 57.555 47.619 0.00 0.00 36.69 2.75
4013 4076 2.760650 ACATTACTCACGAGGCATCTCA 59.239 45.455 0.00 0.00 39.95 3.27
4014 4077 3.195610 ACATTACTCACGAGGCATCTCAA 59.804 43.478 0.00 0.00 39.95 3.02
4015 4078 4.141846 ACATTACTCACGAGGCATCTCAAT 60.142 41.667 0.00 0.00 39.95 2.57
4016 4079 4.471904 TTACTCACGAGGCATCTCAATT 57.528 40.909 0.00 0.00 39.95 2.32
4017 4080 5.592104 TTACTCACGAGGCATCTCAATTA 57.408 39.130 0.00 0.00 39.95 1.40
4018 4081 3.786635 ACTCACGAGGCATCTCAATTAC 58.213 45.455 0.00 0.00 39.95 1.89
4019 4082 3.195610 ACTCACGAGGCATCTCAATTACA 59.804 43.478 0.00 0.00 39.95 2.41
4020 4083 4.141846 ACTCACGAGGCATCTCAATTACAT 60.142 41.667 0.00 0.00 39.95 2.29
4021 4084 4.371786 TCACGAGGCATCTCAATTACATC 58.628 43.478 0.00 0.00 39.95 3.06
4022 4085 4.122046 CACGAGGCATCTCAATTACATCA 58.878 43.478 0.00 0.00 39.95 3.07
4023 4086 4.753610 CACGAGGCATCTCAATTACATCAT 59.246 41.667 0.00 0.00 39.95 2.45
4024 4087 5.237996 CACGAGGCATCTCAATTACATCATT 59.762 40.000 0.00 0.00 39.95 2.57
4025 4088 5.824624 ACGAGGCATCTCAATTACATCATTT 59.175 36.000 0.00 0.00 39.95 2.32
4026 4089 6.140786 CGAGGCATCTCAATTACATCATTTG 58.859 40.000 0.00 0.00 39.95 2.32
4027 4090 5.839621 AGGCATCTCAATTACATCATTTGC 58.160 37.500 0.00 0.00 0.00 3.68
4028 4091 5.361571 AGGCATCTCAATTACATCATTTGCA 59.638 36.000 0.00 0.00 0.00 4.08
4029 4092 6.044046 GGCATCTCAATTACATCATTTGCAA 58.956 36.000 0.00 0.00 0.00 4.08
4030 4093 6.535865 GGCATCTCAATTACATCATTTGCAAA 59.464 34.615 15.44 15.44 0.00 3.68
4031 4094 7.225931 GGCATCTCAATTACATCATTTGCAAAT 59.774 33.333 18.99 18.99 0.00 2.32
4032 4095 8.609176 GCATCTCAATTACATCATTTGCAAATT 58.391 29.630 21.95 10.38 0.00 1.82
4033 4096 9.914923 CATCTCAATTACATCATTTGCAAATTG 57.085 29.630 21.95 19.77 40.24 2.32
4034 4097 9.661563 ATCTCAATTACATCATTTGCAAATTGT 57.338 25.926 25.11 25.11 40.04 2.71
4038 4101 9.976255 CAATTACATCATTTGCAAATTGTAAGG 57.024 29.630 32.31 26.77 36.15 2.69
4039 4102 7.593875 TTACATCATTTGCAAATTGTAAGGC 57.406 32.000 29.00 0.00 31.63 4.35
4040 4103 5.549347 ACATCATTTGCAAATTGTAAGGCA 58.451 33.333 22.15 4.93 0.00 4.75
4041 4104 5.640357 ACATCATTTGCAAATTGTAAGGCAG 59.360 36.000 22.15 9.94 37.59 4.85
4042 4105 5.465532 TCATTTGCAAATTGTAAGGCAGA 57.534 34.783 21.95 10.03 37.59 4.26
4043 4106 5.472148 TCATTTGCAAATTGTAAGGCAGAG 58.528 37.500 21.95 6.65 37.59 3.35
4044 4107 4.935352 TTTGCAAATTGTAAGGCAGAGT 57.065 36.364 8.05 0.00 37.59 3.24
4045 4108 6.208402 TCATTTGCAAATTGTAAGGCAGAGTA 59.792 34.615 21.95 0.00 37.59 2.59
4046 4109 6.588719 TTTGCAAATTGTAAGGCAGAGTAT 57.411 33.333 8.05 0.00 37.59 2.12
4047 4110 6.588719 TTGCAAATTGTAAGGCAGAGTATT 57.411 33.333 0.00 0.00 37.59 1.89
4048 4111 7.695480 TTGCAAATTGTAAGGCAGAGTATTA 57.305 32.000 0.00 0.00 37.59 0.98
4049 4112 7.083875 TGCAAATTGTAAGGCAGAGTATTAC 57.916 36.000 0.00 0.00 0.00 1.89
4050 4113 6.094881 TGCAAATTGTAAGGCAGAGTATTACC 59.905 38.462 0.00 0.00 0.00 2.85
4051 4114 6.094881 GCAAATTGTAAGGCAGAGTATTACCA 59.905 38.462 0.00 0.00 0.00 3.25
4052 4115 7.201821 GCAAATTGTAAGGCAGAGTATTACCAT 60.202 37.037 0.00 0.00 0.00 3.55
4053 4116 8.345565 CAAATTGTAAGGCAGAGTATTACCATC 58.654 37.037 0.00 0.00 0.00 3.51
4054 4117 6.808321 TTGTAAGGCAGAGTATTACCATCT 57.192 37.500 0.00 0.00 0.00 2.90
4055 4118 6.161855 TGTAAGGCAGAGTATTACCATCTG 57.838 41.667 8.14 8.14 42.70 2.90
4056 4119 4.696479 AAGGCAGAGTATTACCATCTGG 57.304 45.455 12.47 0.00 40.64 3.86
4071 4134 5.018539 CCATCTGGTAAGGTAAACATCGA 57.981 43.478 0.00 0.00 0.00 3.59
4072 4135 5.424757 CCATCTGGTAAGGTAAACATCGAA 58.575 41.667 0.00 0.00 0.00 3.71
4073 4136 5.293569 CCATCTGGTAAGGTAAACATCGAAC 59.706 44.000 0.00 0.00 0.00 3.95
4074 4137 4.824289 TCTGGTAAGGTAAACATCGAACC 58.176 43.478 0.00 0.00 0.00 3.62
4075 4138 4.283978 TCTGGTAAGGTAAACATCGAACCA 59.716 41.667 6.03 2.42 35.64 3.67
4076 4139 4.571919 TGGTAAGGTAAACATCGAACCAG 58.428 43.478 6.03 0.00 35.64 4.00
4077 4140 4.040706 TGGTAAGGTAAACATCGAACCAGT 59.959 41.667 6.03 0.00 35.64 4.00
4078 4141 4.999311 GGTAAGGTAAACATCGAACCAGTT 59.001 41.667 6.03 0.00 35.64 3.16
4079 4142 5.121298 GGTAAGGTAAACATCGAACCAGTTC 59.879 44.000 6.03 0.23 35.64 3.01
4080 4143 4.618920 AGGTAAACATCGAACCAGTTCT 57.381 40.909 8.77 0.00 37.44 3.01
4081 4144 5.733620 AGGTAAACATCGAACCAGTTCTA 57.266 39.130 8.77 0.00 37.44 2.10
4082 4145 6.295719 AGGTAAACATCGAACCAGTTCTAT 57.704 37.500 8.77 0.72 37.44 1.98
4083 4146 6.708285 AGGTAAACATCGAACCAGTTCTATT 58.292 36.000 8.77 0.43 37.44 1.73
4084 4147 7.166167 AGGTAAACATCGAACCAGTTCTATTT 58.834 34.615 8.77 6.30 37.44 1.40
4085 4148 8.316214 AGGTAAACATCGAACCAGTTCTATTTA 58.684 33.333 8.77 5.52 37.44 1.40
4086 4149 9.106070 GGTAAACATCGAACCAGTTCTATTTAT 57.894 33.333 8.77 0.00 37.44 1.40
4091 4154 8.774586 ACATCGAACCAGTTCTATTTATATTGC 58.225 33.333 8.77 0.00 37.44 3.56
4092 4155 8.773645 CATCGAACCAGTTCTATTTATATTGCA 58.226 33.333 8.77 0.00 37.44 4.08
4093 4156 8.902540 TCGAACCAGTTCTATTTATATTGCAT 57.097 30.769 8.77 0.00 37.44 3.96
4094 4157 8.988934 TCGAACCAGTTCTATTTATATTGCATC 58.011 33.333 8.77 0.00 37.44 3.91
4095 4158 8.993121 CGAACCAGTTCTATTTATATTGCATCT 58.007 33.333 8.77 0.00 37.44 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.028130 TTTCGCTGATGTGGCAAACA 58.972 45.000 0.00 0.00 44.79 2.83
9 10 2.352503 ATTTCGCTGATGTGGCAAAC 57.647 45.000 0.00 0.00 0.00 2.93
10 11 2.816672 TGTATTTCGCTGATGTGGCAAA 59.183 40.909 0.00 0.00 0.00 3.68
11 12 2.431454 TGTATTTCGCTGATGTGGCAA 58.569 42.857 0.00 0.00 0.00 4.52
12 13 2.106477 TGTATTTCGCTGATGTGGCA 57.894 45.000 0.00 0.00 0.00 4.92
13 14 2.348872 CGATGTATTTCGCTGATGTGGC 60.349 50.000 0.00 0.00 31.60 5.01
14 15 3.123050 TCGATGTATTTCGCTGATGTGG 58.877 45.455 0.00 0.00 38.97 4.17
15 16 4.777140 TTCGATGTATTTCGCTGATGTG 57.223 40.909 0.00 0.00 38.97 3.21
16 17 6.091305 CCATATTCGATGTATTTCGCTGATGT 59.909 38.462 0.00 0.00 38.97 3.06
17 18 6.091305 ACCATATTCGATGTATTTCGCTGATG 59.909 38.462 0.00 0.00 38.97 3.07
18 19 6.166279 ACCATATTCGATGTATTTCGCTGAT 58.834 36.000 0.00 0.00 38.97 2.90
19 20 5.538118 ACCATATTCGATGTATTTCGCTGA 58.462 37.500 0.00 0.00 38.97 4.26
20 21 5.845985 ACCATATTCGATGTATTTCGCTG 57.154 39.130 0.00 0.00 38.97 5.18
21 22 6.146184 CAGAACCATATTCGATGTATTTCGCT 59.854 38.462 0.00 0.00 38.97 4.93
22 23 6.299604 CAGAACCATATTCGATGTATTTCGC 58.700 40.000 0.00 0.00 38.97 4.70
23 24 6.423905 ACCAGAACCATATTCGATGTATTTCG 59.576 38.462 0.00 0.00 40.46 3.46
24 25 7.441157 TCACCAGAACCATATTCGATGTATTTC 59.559 37.037 0.00 0.00 0.00 2.17
25 26 7.226720 GTCACCAGAACCATATTCGATGTATTT 59.773 37.037 0.00 0.00 0.00 1.40
26 27 6.706270 GTCACCAGAACCATATTCGATGTATT 59.294 38.462 0.00 0.00 0.00 1.89
27 28 6.223852 GTCACCAGAACCATATTCGATGTAT 58.776 40.000 0.00 0.00 0.00 2.29
28 29 5.452776 GGTCACCAGAACCATATTCGATGTA 60.453 44.000 0.00 0.00 0.00 2.29
29 30 4.442706 GTCACCAGAACCATATTCGATGT 58.557 43.478 0.00 0.00 0.00 3.06
30 31 3.809832 GGTCACCAGAACCATATTCGATG 59.190 47.826 0.00 0.00 0.00 3.84
31 32 3.492656 CGGTCACCAGAACCATATTCGAT 60.493 47.826 0.00 0.00 0.00 3.59
32 33 2.159156 CGGTCACCAGAACCATATTCGA 60.159 50.000 0.00 0.00 0.00 3.71
33 34 2.201732 CGGTCACCAGAACCATATTCG 58.798 52.381 0.00 0.00 0.00 3.34
34 35 3.261981 ACGGTCACCAGAACCATATTC 57.738 47.619 0.00 0.00 0.00 1.75
35 36 4.028131 TCTACGGTCACCAGAACCATATT 58.972 43.478 0.00 0.00 0.00 1.28
36 37 3.637229 CTCTACGGTCACCAGAACCATAT 59.363 47.826 0.00 0.00 0.00 1.78
37 38 3.021695 CTCTACGGTCACCAGAACCATA 58.978 50.000 0.00 0.00 0.00 2.74
38 39 1.825474 CTCTACGGTCACCAGAACCAT 59.175 52.381 0.00 0.00 0.00 3.55
39 40 1.254026 CTCTACGGTCACCAGAACCA 58.746 55.000 0.00 0.00 0.00 3.67
40 41 1.067776 CACTCTACGGTCACCAGAACC 60.068 57.143 0.00 0.00 0.00 3.62
41 42 1.884579 TCACTCTACGGTCACCAGAAC 59.115 52.381 0.00 0.00 0.00 3.01
42 43 1.884579 GTCACTCTACGGTCACCAGAA 59.115 52.381 0.00 0.00 0.00 3.02
43 44 1.202842 TGTCACTCTACGGTCACCAGA 60.203 52.381 0.00 0.00 0.00 3.86
44 45 1.068472 GTGTCACTCTACGGTCACCAG 60.068 57.143 0.00 0.00 0.00 4.00
45 46 0.956633 GTGTCACTCTACGGTCACCA 59.043 55.000 0.00 0.00 0.00 4.17
46 47 1.245732 AGTGTCACTCTACGGTCACC 58.754 55.000 0.00 0.00 0.00 4.02
47 48 2.351544 GGAAGTGTCACTCTACGGTCAC 60.352 54.545 5.82 0.00 0.00 3.67
48 49 1.884579 GGAAGTGTCACTCTACGGTCA 59.115 52.381 5.82 0.00 0.00 4.02
49 50 2.095161 CAGGAAGTGTCACTCTACGGTC 60.095 54.545 5.82 0.00 0.00 4.79
50 51 1.887198 CAGGAAGTGTCACTCTACGGT 59.113 52.381 5.82 0.00 0.00 4.83
51 52 1.202582 CCAGGAAGTGTCACTCTACGG 59.797 57.143 5.82 1.70 0.00 4.02
52 53 1.402984 GCCAGGAAGTGTCACTCTACG 60.403 57.143 5.82 0.00 0.00 3.51
53 54 1.618837 TGCCAGGAAGTGTCACTCTAC 59.381 52.381 5.82 0.00 0.00 2.59
54 55 2.009681 TGCCAGGAAGTGTCACTCTA 57.990 50.000 5.82 0.00 0.00 2.43
55 56 1.131638 TTGCCAGGAAGTGTCACTCT 58.868 50.000 5.82 0.00 0.00 3.24
56 57 2.079925 GATTGCCAGGAAGTGTCACTC 58.920 52.381 5.82 0.09 0.00 3.51
57 58 1.701847 AGATTGCCAGGAAGTGTCACT 59.298 47.619 0.00 0.00 0.00 3.41
58 59 2.079925 GAGATTGCCAGGAAGTGTCAC 58.920 52.381 0.00 0.00 0.00 3.67
59 60 1.338105 CGAGATTGCCAGGAAGTGTCA 60.338 52.381 0.00 0.00 0.00 3.58
60 61 1.363744 CGAGATTGCCAGGAAGTGTC 58.636 55.000 0.00 0.00 0.00 3.67
61 62 0.036010 CCGAGATTGCCAGGAAGTGT 60.036 55.000 0.00 0.00 0.00 3.55
62 63 0.036010 ACCGAGATTGCCAGGAAGTG 60.036 55.000 0.00 0.00 0.00 3.16
63 64 0.036010 CACCGAGATTGCCAGGAAGT 60.036 55.000 0.00 0.00 0.00 3.01
64 65 0.250234 TCACCGAGATTGCCAGGAAG 59.750 55.000 0.00 0.00 0.00 3.46
65 66 0.036388 GTCACCGAGATTGCCAGGAA 60.036 55.000 0.00 0.00 0.00 3.36
66 67 1.596934 GTCACCGAGATTGCCAGGA 59.403 57.895 0.00 0.00 0.00 3.86
67 68 1.450312 GGTCACCGAGATTGCCAGG 60.450 63.158 0.00 0.00 0.00 4.45
68 69 4.208632 GGTCACCGAGATTGCCAG 57.791 61.111 0.00 0.00 0.00 4.85
79 80 3.189910 GGAAAGGTCAAAATACGGTCACC 59.810 47.826 0.00 0.00 0.00 4.02
80 81 4.070009 AGGAAAGGTCAAAATACGGTCAC 58.930 43.478 0.00 0.00 0.00 3.67
81 82 4.069304 CAGGAAAGGTCAAAATACGGTCA 58.931 43.478 0.00 0.00 0.00 4.02
82 83 4.320870 TCAGGAAAGGTCAAAATACGGTC 58.679 43.478 0.00 0.00 0.00 4.79
83 84 4.360951 TCAGGAAAGGTCAAAATACGGT 57.639 40.909 0.00 0.00 0.00 4.83
84 85 5.897377 ATTCAGGAAAGGTCAAAATACGG 57.103 39.130 0.00 0.00 0.00 4.02
85 86 7.119262 ACTGTATTCAGGAAAGGTCAAAATACG 59.881 37.037 4.24 0.00 45.14 3.06
86 87 8.237267 CACTGTATTCAGGAAAGGTCAAAATAC 58.763 37.037 4.24 0.00 45.14 1.89
87 88 8.160765 TCACTGTATTCAGGAAAGGTCAAAATA 58.839 33.333 4.24 0.00 45.14 1.40
88 89 7.004086 TCACTGTATTCAGGAAAGGTCAAAAT 58.996 34.615 4.24 0.00 45.14 1.82
89 90 6.262273 GTCACTGTATTCAGGAAAGGTCAAAA 59.738 38.462 4.24 0.00 45.14 2.44
90 91 5.763204 GTCACTGTATTCAGGAAAGGTCAAA 59.237 40.000 4.24 0.00 45.14 2.69
91 92 5.305585 GTCACTGTATTCAGGAAAGGTCAA 58.694 41.667 4.24 0.00 45.14 3.18
92 93 4.262894 GGTCACTGTATTCAGGAAAGGTCA 60.263 45.833 4.24 0.00 45.14 4.02
93 94 4.254492 GGTCACTGTATTCAGGAAAGGTC 58.746 47.826 4.24 0.00 45.14 3.85
94 95 3.650942 TGGTCACTGTATTCAGGAAAGGT 59.349 43.478 4.24 0.00 45.14 3.50
95 96 4.286297 TGGTCACTGTATTCAGGAAAGG 57.714 45.455 4.24 0.00 45.14 3.11
96 97 6.824305 ATTTGGTCACTGTATTCAGGAAAG 57.176 37.500 4.24 0.00 45.14 2.62
97 98 6.775142 TCAATTTGGTCACTGTATTCAGGAAA 59.225 34.615 4.24 0.00 45.14 3.13
98 99 6.303054 TCAATTTGGTCACTGTATTCAGGAA 58.697 36.000 4.24 0.00 45.14 3.36
99 100 5.875224 TCAATTTGGTCACTGTATTCAGGA 58.125 37.500 4.24 0.00 45.14 3.86
100 101 6.381801 GTTCAATTTGGTCACTGTATTCAGG 58.618 40.000 4.24 0.00 45.14 3.86
101 102 6.381801 GGTTCAATTTGGTCACTGTATTCAG 58.618 40.000 0.00 0.00 46.18 3.02
102 103 5.242838 GGGTTCAATTTGGTCACTGTATTCA 59.757 40.000 0.00 0.00 0.00 2.57
103 104 5.476945 AGGGTTCAATTTGGTCACTGTATTC 59.523 40.000 0.00 0.00 0.00 1.75
104 105 5.393866 AGGGTTCAATTTGGTCACTGTATT 58.606 37.500 0.00 0.00 0.00 1.89
105 106 4.998051 AGGGTTCAATTTGGTCACTGTAT 58.002 39.130 0.00 0.00 0.00 2.29
106 107 4.447138 AGGGTTCAATTTGGTCACTGTA 57.553 40.909 0.00 0.00 0.00 2.74
107 108 3.312736 AGGGTTCAATTTGGTCACTGT 57.687 42.857 0.00 0.00 0.00 3.55
108 109 3.758554 CCTAGGGTTCAATTTGGTCACTG 59.241 47.826 0.00 0.00 0.00 3.66
109 110 3.655777 TCCTAGGGTTCAATTTGGTCACT 59.344 43.478 9.46 0.00 0.00 3.41
110 111 4.028993 TCCTAGGGTTCAATTTGGTCAC 57.971 45.455 9.46 0.00 0.00 3.67
111 112 4.290985 TGATCCTAGGGTTCAATTTGGTCA 59.709 41.667 9.46 0.00 29.64 4.02
112 113 4.855340 TGATCCTAGGGTTCAATTTGGTC 58.145 43.478 9.46 0.00 29.64 4.02
113 114 4.946160 TGATCCTAGGGTTCAATTTGGT 57.054 40.909 9.46 0.00 29.64 3.67
114 115 6.796785 ATTTGATCCTAGGGTTCAATTTGG 57.203 37.500 21.46 0.00 39.95 3.28
115 116 7.839907 TCAATTTGATCCTAGGGTTCAATTTG 58.160 34.615 29.59 29.59 44.08 2.32
116 117 7.895429 TCTCAATTTGATCCTAGGGTTCAATTT 59.105 33.333 21.46 20.23 39.95 1.82
117 118 7.413446 TCTCAATTTGATCCTAGGGTTCAATT 58.587 34.615 21.46 17.01 39.95 2.32
118 119 6.973642 TCTCAATTTGATCCTAGGGTTCAAT 58.026 36.000 21.46 10.22 39.95 2.57
119 120 6.387192 TCTCAATTTGATCCTAGGGTTCAA 57.613 37.500 18.62 18.62 38.96 2.69
120 121 6.581388 ATCTCAATTTGATCCTAGGGTTCA 57.419 37.500 9.46 9.97 30.56 3.18
121 122 7.740805 AGTATCTCAATTTGATCCTAGGGTTC 58.259 38.462 9.46 7.30 0.00 3.62
122 123 7.698163 AGTATCTCAATTTGATCCTAGGGTT 57.302 36.000 9.46 0.00 0.00 4.11
123 124 8.980832 ATAGTATCTCAATTTGATCCTAGGGT 57.019 34.615 9.46 0.00 0.00 4.34
141 142 9.733219 GGCCGAGTAAATTACATCTATAGTATC 57.267 37.037 5.89 0.00 0.00 2.24
142 143 8.693625 GGGCCGAGTAAATTACATCTATAGTAT 58.306 37.037 5.89 0.00 0.00 2.12
143 144 7.670979 TGGGCCGAGTAAATTACATCTATAGTA 59.329 37.037 5.89 0.00 0.00 1.82
144 145 6.495872 TGGGCCGAGTAAATTACATCTATAGT 59.504 38.462 5.89 0.00 0.00 2.12
145 146 6.931838 TGGGCCGAGTAAATTACATCTATAG 58.068 40.000 5.89 0.00 0.00 1.31
146 147 6.495872 ACTGGGCCGAGTAAATTACATCTATA 59.504 38.462 20.11 0.00 0.00 1.31
147 148 5.307196 ACTGGGCCGAGTAAATTACATCTAT 59.693 40.000 20.11 0.00 0.00 1.98
148 149 4.652421 ACTGGGCCGAGTAAATTACATCTA 59.348 41.667 20.11 0.00 0.00 1.98
149 150 3.454812 ACTGGGCCGAGTAAATTACATCT 59.545 43.478 20.11 0.00 0.00 2.90
150 151 3.805207 ACTGGGCCGAGTAAATTACATC 58.195 45.455 20.11 0.17 0.00 3.06
151 152 3.740141 CGACTGGGCCGAGTAAATTACAT 60.740 47.826 21.54 0.00 0.00 2.29
152 153 2.417651 CGACTGGGCCGAGTAAATTACA 60.418 50.000 21.54 0.00 0.00 2.41
153 154 2.199236 CGACTGGGCCGAGTAAATTAC 58.801 52.381 21.54 6.18 0.00 1.89
154 155 1.826720 ACGACTGGGCCGAGTAAATTA 59.173 47.619 21.54 0.00 0.00 1.40
155 156 0.611714 ACGACTGGGCCGAGTAAATT 59.388 50.000 21.54 2.31 0.00 1.82
156 157 0.611714 AACGACTGGGCCGAGTAAAT 59.388 50.000 21.54 6.30 0.00 1.40
157 158 0.393820 AAACGACTGGGCCGAGTAAA 59.606 50.000 21.54 0.00 0.00 2.01
158 159 0.037975 GAAACGACTGGGCCGAGTAA 60.038 55.000 21.54 0.00 0.00 2.24
159 160 1.180456 TGAAACGACTGGGCCGAGTA 61.180 55.000 21.54 0.40 0.00 2.59
160 161 2.342648 GAAACGACTGGGCCGAGT 59.657 61.111 21.67 21.67 0.00 4.18
161 162 1.738099 CTGAAACGACTGGGCCGAG 60.738 63.158 14.03 14.03 0.00 4.63
162 163 1.750341 TTCTGAAACGACTGGGCCGA 61.750 55.000 0.00 0.00 0.00 5.54
163 164 1.301401 TTCTGAAACGACTGGGCCG 60.301 57.895 0.00 0.00 0.00 6.13
164 165 0.250338 AGTTCTGAAACGACTGGGCC 60.250 55.000 0.00 0.00 40.48 5.80
165 166 1.594331 AAGTTCTGAAACGACTGGGC 58.406 50.000 0.00 0.00 40.48 5.36
166 167 2.548480 GGAAAGTTCTGAAACGACTGGG 59.452 50.000 0.00 0.00 40.48 4.45
167 168 3.467803 AGGAAAGTTCTGAAACGACTGG 58.532 45.455 0.00 0.00 40.48 4.00
168 169 4.372656 AGAGGAAAGTTCTGAAACGACTG 58.627 43.478 0.00 0.00 40.48 3.51
169 170 4.623002 GAGAGGAAAGTTCTGAAACGACT 58.377 43.478 0.00 0.00 40.48 4.18
170 171 3.425858 CGAGAGGAAAGTTCTGAAACGAC 59.574 47.826 0.00 0.00 40.48 4.34
171 172 3.067742 ACGAGAGGAAAGTTCTGAAACGA 59.932 43.478 0.00 0.00 40.48 3.85
172 173 3.381949 ACGAGAGGAAAGTTCTGAAACG 58.618 45.455 0.00 0.00 40.48 3.60
173 174 3.741856 GGACGAGAGGAAAGTTCTGAAAC 59.258 47.826 0.00 0.00 35.50 2.78
174 175 3.552273 CGGACGAGAGGAAAGTTCTGAAA 60.552 47.826 0.00 0.00 0.00 2.69
175 176 2.030185 CGGACGAGAGGAAAGTTCTGAA 60.030 50.000 0.00 0.00 0.00 3.02
176 177 1.540267 CGGACGAGAGGAAAGTTCTGA 59.460 52.381 0.00 0.00 0.00 3.27
177 178 1.983972 CGGACGAGAGGAAAGTTCTG 58.016 55.000 0.00 0.00 0.00 3.02
178 179 0.244178 GCGGACGAGAGGAAAGTTCT 59.756 55.000 0.00 0.00 0.00 3.01
179 180 0.736672 GGCGGACGAGAGGAAAGTTC 60.737 60.000 0.00 0.00 0.00 3.01
180 181 1.292541 GGCGGACGAGAGGAAAGTT 59.707 57.895 0.00 0.00 0.00 2.66
181 182 2.647158 GGGCGGACGAGAGGAAAGT 61.647 63.158 0.00 0.00 0.00 2.66
182 183 2.184579 GGGCGGACGAGAGGAAAG 59.815 66.667 0.00 0.00 0.00 2.62
183 184 3.387947 GGGGCGGACGAGAGGAAA 61.388 66.667 0.00 0.00 0.00 3.13
201 202 1.686115 CCAGTGCCAAAGAATAGGGGG 60.686 57.143 0.00 0.00 0.00 5.40
202 203 1.767759 CCAGTGCCAAAGAATAGGGG 58.232 55.000 0.00 0.00 0.00 4.79
203 204 1.106285 GCCAGTGCCAAAGAATAGGG 58.894 55.000 0.00 0.00 0.00 3.53
204 205 1.747355 CTGCCAGTGCCAAAGAATAGG 59.253 52.381 0.00 0.00 36.33 2.57
205 206 1.747355 CCTGCCAGTGCCAAAGAATAG 59.253 52.381 0.00 0.00 36.33 1.73
206 207 1.838112 CCTGCCAGTGCCAAAGAATA 58.162 50.000 0.00 0.00 36.33 1.75
207 208 1.538687 GCCTGCCAGTGCCAAAGAAT 61.539 55.000 0.00 0.00 36.33 2.40
208 209 2.202395 GCCTGCCAGTGCCAAAGAA 61.202 57.895 0.00 0.00 36.33 2.52
209 210 2.598394 GCCTGCCAGTGCCAAAGA 60.598 61.111 0.00 0.00 36.33 2.52
215 216 3.994853 GTTTGGGCCTGCCAGTGC 61.995 66.667 10.86 0.00 37.98 4.40
216 217 3.305516 GGTTTGGGCCTGCCAGTG 61.306 66.667 10.86 0.00 37.98 3.66
217 218 3.511610 AGGTTTGGGCCTGCCAGT 61.512 61.111 10.86 0.00 37.50 4.00
226 227 2.733945 CGTTTGGCCAGGTTTGGG 59.266 61.111 5.11 0.00 45.16 4.12
296 298 2.986979 TAGCCTCGTGTCGTGCCA 60.987 61.111 0.00 0.00 0.00 4.92
419 427 3.189287 ACTTGCACACTTAAGTAGCATGC 59.811 43.478 28.73 24.27 37.82 4.06
432 440 1.989706 TTTTAGGGGGACTTGCACAC 58.010 50.000 0.00 0.00 0.00 3.82
458 470 9.719279 GTACTAGTATACTTGCACACTTAAGAG 57.281 37.037 11.40 3.53 0.00 2.85
459 471 9.458727 AGTACTAGTATACTTGCACACTTAAGA 57.541 33.333 11.40 0.00 30.99 2.10
465 477 5.041940 GGCAGTACTAGTATACTTGCACAC 58.958 45.833 21.90 14.01 32.92 3.82
868 884 1.302366 TGGCTCATTCATGATCGCAC 58.698 50.000 0.00 0.00 36.02 5.34
1437 1480 4.794648 CCGAAGGCGCCATGGGAA 62.795 66.667 31.54 0.00 46.14 3.97
1478 1521 3.458189 CGGAGGATGATGTTGTAAGTCC 58.542 50.000 0.00 0.00 0.00 3.85
1561 1604 2.260434 GTCCGGAGCAACTACGCA 59.740 61.111 3.06 0.00 36.34 5.24
1565 1608 4.124351 CGCGGTCCGGAGCAACTA 62.124 66.667 31.39 0.00 0.00 2.24
1686 1729 3.243367 GGAGCACTGCATTGTAACAAACA 60.243 43.478 5.89 0.00 35.88 2.83
1785 1828 2.112279 TGTAAGTGGAGAGGTTGGGT 57.888 50.000 0.00 0.00 0.00 4.51
1793 1836 2.093500 AGCATCGCATTGTAAGTGGAGA 60.093 45.455 0.00 0.00 0.00 3.71
1856 1899 2.290577 GCAATCATCCTCTCCCATACCC 60.291 54.545 0.00 0.00 0.00 3.69
2125 2168 1.428912 ACCATCAAAGAGCCCCTTCAA 59.571 47.619 0.00 0.00 33.02 2.69
2311 2354 7.494952 CACGGATGAATATGAGAATGCATCTAT 59.505 37.037 0.00 0.00 40.50 1.98
2335 2378 2.359900 CTTGCACAGTCCCCTTATCAC 58.640 52.381 0.00 0.00 0.00 3.06
2343 2386 1.379044 CCCATCCTTGCACAGTCCC 60.379 63.158 0.00 0.00 0.00 4.46
2408 2451 7.611467 TGTAAATATGAGGATTCAGTTTGCAGT 59.389 33.333 0.00 0.00 35.10 4.40
2469 2512 9.424319 CCGTATATTCTTACAGCATCACTAAAT 57.576 33.333 0.00 0.00 0.00 1.40
2679 2722 0.964358 GAGCAAGGGCAGCATCAACT 60.964 55.000 0.00 0.00 44.61 3.16
3127 3170 6.360618 AGGCAAAGAAGATATTACCAAGAGG 58.639 40.000 0.00 0.00 42.21 3.69
3172 3215 7.015584 GGTGAAAAATATAGGCCATGGAAAGAT 59.984 37.037 18.40 5.01 0.00 2.40
3174 3217 6.324770 AGGTGAAAAATATAGGCCATGGAAAG 59.675 38.462 18.40 0.00 0.00 2.62
3224 3268 6.109359 GGCATGAGAGAAACTACATAAGTGT 58.891 40.000 0.00 0.00 38.88 3.55
3263 3307 7.494211 CAATTCTTGATTATGATGCCCTCAAA 58.506 34.615 0.00 0.00 37.44 2.69
3319 3363 8.082242 GGTGAAAATGTGAAAGCAGTTAGTATT 58.918 33.333 0.00 0.00 0.00 1.89
3324 3368 5.735922 GCAGGTGAAAATGTGAAAGCAGTTA 60.736 40.000 0.00 0.00 0.00 2.24
3329 3373 3.096489 TGCAGGTGAAAATGTGAAAGC 57.904 42.857 0.00 0.00 0.00 3.51
3349 3393 3.306364 GCATACTGCTCCGAACCTGATAT 60.306 47.826 0.00 0.00 40.96 1.63
3351 3395 1.202580 GCATACTGCTCCGAACCTGAT 60.203 52.381 0.00 0.00 40.96 2.90
3352 3396 0.175760 GCATACTGCTCCGAACCTGA 59.824 55.000 0.00 0.00 40.96 3.86
3353 3397 2.682893 GCATACTGCTCCGAACCTG 58.317 57.895 0.00 0.00 40.96 4.00
3389 3433 3.756933 AATGCATGCACTCAAAAGGTT 57.243 38.095 25.37 7.08 0.00 3.50
3397 3441 3.855689 AGTTGGTAAATGCATGCACTC 57.144 42.857 25.37 13.06 0.00 3.51
3398 3442 5.720371 TTTAGTTGGTAAATGCATGCACT 57.280 34.783 25.37 10.02 0.00 4.40
3399 3443 8.542132 CATTATTTAGTTGGTAAATGCATGCAC 58.458 33.333 25.37 10.28 40.83 4.57
3400 3444 8.256605 ACATTATTTAGTTGGTAAATGCATGCA 58.743 29.630 25.04 25.04 40.83 3.96
3401 3445 8.542132 CACATTATTTAGTTGGTAAATGCATGC 58.458 33.333 11.82 11.82 40.83 4.06
3402 3446 9.585099 ACACATTATTTAGTTGGTAAATGCATG 57.415 29.630 0.00 0.00 40.83 4.06
3403 3447 9.585099 CACACATTATTTAGTTGGTAAATGCAT 57.415 29.630 0.00 0.00 40.83 3.96
3404 3448 8.031864 CCACACATTATTTAGTTGGTAAATGCA 58.968 33.333 0.00 0.00 40.83 3.96
3405 3449 8.247562 TCCACACATTATTTAGTTGGTAAATGC 58.752 33.333 1.13 0.00 40.83 3.56
3408 3452 8.301002 GCTTCCACACATTATTTAGTTGGTAAA 58.699 33.333 0.00 0.00 35.03 2.01
3409 3453 7.448777 TGCTTCCACACATTATTTAGTTGGTAA 59.551 33.333 0.00 0.00 0.00 2.85
3410 3454 6.943146 TGCTTCCACACATTATTTAGTTGGTA 59.057 34.615 0.00 0.00 0.00 3.25
3411 3455 5.772672 TGCTTCCACACATTATTTAGTTGGT 59.227 36.000 0.00 0.00 0.00 3.67
3412 3456 6.071952 AGTGCTTCCACACATTATTTAGTTGG 60.072 38.462 0.00 0.00 44.53 3.77
3452 3496 6.490040 AGAACCAGCTAAGCTTATGAAACAAA 59.510 34.615 6.64 0.00 36.40 2.83
3463 3507 4.154918 CGAATCAAAAGAACCAGCTAAGCT 59.845 41.667 0.00 0.00 40.77 3.74
3470 3514 4.065088 TCTGGACGAATCAAAAGAACCAG 58.935 43.478 0.00 0.00 43.13 4.00
3476 3521 3.619038 GCCTAGTCTGGACGAATCAAAAG 59.381 47.826 0.00 0.00 36.20 2.27
3488 3533 0.107945 GCAAGGACAGCCTAGTCTGG 60.108 60.000 5.66 0.00 46.28 3.86
3497 3542 0.037790 AAGAGACGAGCAAGGACAGC 60.038 55.000 0.00 0.00 0.00 4.40
3508 3553 6.127619 TGCATCATAGAAGAAAGAAGAGACGA 60.128 38.462 0.00 0.00 0.00 4.20
3509 3554 6.038985 TGCATCATAGAAGAAAGAAGAGACG 58.961 40.000 0.00 0.00 0.00 4.18
3541 3589 8.038944 TCATCAGTTTACTATTGTACTTGACCC 58.961 37.037 0.00 0.00 0.00 4.46
3560 3608 0.912486 GGCCCACTTAGGTCATCAGT 59.088 55.000 0.00 0.00 34.66 3.41
3561 3609 1.207791 AGGCCCACTTAGGTCATCAG 58.792 55.000 0.00 0.00 32.23 2.90
3562 3610 2.561209 TAGGCCCACTTAGGTCATCA 57.439 50.000 0.00 0.00 32.23 3.07
3563 3611 3.926058 TTTAGGCCCACTTAGGTCATC 57.074 47.619 0.00 0.00 32.23 2.92
3564 3612 4.881157 ATTTTAGGCCCACTTAGGTCAT 57.119 40.909 0.00 0.00 32.23 3.06
3565 3613 5.987019 ATATTTTAGGCCCACTTAGGTCA 57.013 39.130 0.00 0.00 32.23 4.02
3566 3614 6.362248 TCAATATTTTAGGCCCACTTAGGTC 58.638 40.000 0.00 0.00 34.66 3.85
3567 3615 6.335781 TCAATATTTTAGGCCCACTTAGGT 57.664 37.500 0.00 0.00 34.66 3.08
3568 3616 7.839680 AATCAATATTTTAGGCCCACTTAGG 57.160 36.000 0.00 0.00 37.03 2.69
3582 3630 9.410556 CGAAACTGAACTGGAAAATCAATATTT 57.589 29.630 0.00 0.00 36.87 1.40
3609 3657 9.941991 CATAAACGAAATAAACAAGCAAAGATG 57.058 29.630 0.00 0.00 0.00 2.90
3644 3694 7.013083 CGTGTATGGTACTATGGTTACTTCTCT 59.987 40.741 1.31 0.00 0.00 3.10
3652 3702 2.767394 TGGCGTGTATGGTACTATGGTT 59.233 45.455 1.31 0.00 0.00 3.67
3662 3712 2.037121 TCCATATCTGTGGCGTGTATGG 59.963 50.000 0.00 0.00 41.90 2.74
3676 3727 8.760980 AGCTATAGGAGTTAGATGTCCATATC 57.239 38.462 1.04 0.00 35.02 1.63
3686 3737 7.068839 CAGGTTTCTCAAGCTATAGGAGTTAGA 59.931 40.741 1.04 0.00 38.76 2.10
3688 3739 6.407074 GCAGGTTTCTCAAGCTATAGGAGTTA 60.407 42.308 1.04 0.00 38.76 2.24
3710 3761 0.459899 TGTCTACCAGCATACCGCAG 59.540 55.000 0.00 0.00 46.13 5.18
3714 3765 4.672587 TCAAGATGTCTACCAGCATACC 57.327 45.455 0.00 0.00 0.00 2.73
3720 3771 7.439157 TTTTGTGATTCAAGATGTCTACCAG 57.561 36.000 0.00 0.00 37.35 4.00
3726 3777 6.471519 GCATAGCTTTTGTGATTCAAGATGTC 59.528 38.462 0.00 0.00 37.35 3.06
3728 3779 6.327154 TGCATAGCTTTTGTGATTCAAGATG 58.673 36.000 0.00 0.00 37.35 2.90
3738 3793 9.740239 ATTAGTATGAATTGCATAGCTTTTGTG 57.260 29.630 0.00 0.00 40.04 3.33
3817 3877 9.877178 AGATGTACACTTGAAGTAAAATAGGAG 57.123 33.333 0.00 0.00 0.00 3.69
3848 3908 9.905171 AAGCTGAGAAGATACAAAAGAAAAATC 57.095 29.630 0.00 0.00 0.00 2.17
3860 3921 5.065704 TCACACTGAAGCTGAGAAGATAC 57.934 43.478 0.00 0.00 0.00 2.24
3916 3979 2.749076 CTGAGTCGAATTTCCATTGGCA 59.251 45.455 0.00 0.00 0.00 4.92
3919 3982 3.686241 TGCTCTGAGTCGAATTTCCATTG 59.314 43.478 6.53 0.00 0.00 2.82
3951 4014 1.005332 TCGAATTTCCATTGGCCTGGA 59.995 47.619 9.65 9.65 43.62 3.86
3958 4021 5.447010 GCTTCTCTGAGTCGAATTTCCATTG 60.447 44.000 4.32 0.00 0.00 2.82
3959 4022 4.633565 GCTTCTCTGAGTCGAATTTCCATT 59.366 41.667 4.32 0.00 0.00 3.16
3960 4023 4.187694 GCTTCTCTGAGTCGAATTTCCAT 58.812 43.478 4.32 0.00 0.00 3.41
3961 4024 3.006859 TGCTTCTCTGAGTCGAATTTCCA 59.993 43.478 4.32 0.00 0.00 3.53
3962 4025 3.589988 TGCTTCTCTGAGTCGAATTTCC 58.410 45.455 4.32 0.00 0.00 3.13
3963 4026 4.435386 GCTTGCTTCTCTGAGTCGAATTTC 60.435 45.833 4.32 0.00 0.00 2.17
3964 4027 3.434984 GCTTGCTTCTCTGAGTCGAATTT 59.565 43.478 4.32 0.00 0.00 1.82
3965 4028 2.999355 GCTTGCTTCTCTGAGTCGAATT 59.001 45.455 4.32 0.00 0.00 2.17
3966 4029 2.233431 AGCTTGCTTCTCTGAGTCGAAT 59.767 45.455 4.32 0.00 0.00 3.34
3967 4030 1.615883 AGCTTGCTTCTCTGAGTCGAA 59.384 47.619 4.32 0.00 0.00 3.71
3968 4031 1.252175 AGCTTGCTTCTCTGAGTCGA 58.748 50.000 4.32 0.00 0.00 4.20
3969 4032 2.077413 AAGCTTGCTTCTCTGAGTCG 57.923 50.000 0.00 0.00 0.00 4.18
3970 4033 3.663025 AGAAAGCTTGCTTCTCTGAGTC 58.337 45.455 0.00 1.12 0.00 3.36
3971 4034 3.767902 AGAAAGCTTGCTTCTCTGAGT 57.232 42.857 0.00 0.00 0.00 3.41
3972 4035 4.564041 TGTAGAAAGCTTGCTTCTCTGAG 58.436 43.478 13.52 0.00 34.90 3.35
3973 4036 4.607293 TGTAGAAAGCTTGCTTCTCTGA 57.393 40.909 13.52 0.00 34.90 3.27
3974 4037 5.876612 AATGTAGAAAGCTTGCTTCTCTG 57.123 39.130 13.52 0.00 34.90 3.35
3975 4038 6.706295 AGTAATGTAGAAAGCTTGCTTCTCT 58.294 36.000 13.52 7.58 34.90 3.10
3976 4039 6.591834 TGAGTAATGTAGAAAGCTTGCTTCTC 59.408 38.462 13.52 11.16 34.90 2.87
3977 4040 6.370166 GTGAGTAATGTAGAAAGCTTGCTTCT 59.630 38.462 13.52 8.38 37.00 2.85
3978 4041 6.538444 GTGAGTAATGTAGAAAGCTTGCTTC 58.462 40.000 13.52 8.35 0.00 3.86
3979 4042 5.120830 CGTGAGTAATGTAGAAAGCTTGCTT 59.879 40.000 13.52 1.55 0.00 3.91
3980 4043 4.627467 CGTGAGTAATGTAGAAAGCTTGCT 59.373 41.667 12.76 12.76 0.00 3.91
3981 4044 4.625742 TCGTGAGTAATGTAGAAAGCTTGC 59.374 41.667 0.00 0.00 0.00 4.01
3982 4045 5.289675 CCTCGTGAGTAATGTAGAAAGCTTG 59.710 44.000 0.00 0.00 0.00 4.01
3983 4046 5.411781 CCTCGTGAGTAATGTAGAAAGCTT 58.588 41.667 0.00 0.00 0.00 3.74
3984 4047 4.678309 GCCTCGTGAGTAATGTAGAAAGCT 60.678 45.833 0.00 0.00 0.00 3.74
3985 4048 3.552294 GCCTCGTGAGTAATGTAGAAAGC 59.448 47.826 0.00 0.00 0.00 3.51
3986 4049 4.744570 TGCCTCGTGAGTAATGTAGAAAG 58.255 43.478 0.00 0.00 0.00 2.62
3987 4050 4.794278 TGCCTCGTGAGTAATGTAGAAA 57.206 40.909 0.00 0.00 0.00 2.52
3988 4051 4.645136 AGATGCCTCGTGAGTAATGTAGAA 59.355 41.667 0.00 0.00 0.00 2.10
3989 4052 4.207955 AGATGCCTCGTGAGTAATGTAGA 58.792 43.478 0.00 0.00 0.00 2.59
3990 4053 4.036852 TGAGATGCCTCGTGAGTAATGTAG 59.963 45.833 0.00 0.00 42.33 2.74
3991 4054 3.951680 TGAGATGCCTCGTGAGTAATGTA 59.048 43.478 0.00 0.00 42.33 2.29
3992 4055 2.760650 TGAGATGCCTCGTGAGTAATGT 59.239 45.455 0.00 0.00 42.33 2.71
3993 4056 3.443099 TGAGATGCCTCGTGAGTAATG 57.557 47.619 0.00 0.00 42.33 1.90
3994 4057 4.679373 ATTGAGATGCCTCGTGAGTAAT 57.321 40.909 0.00 0.00 42.33 1.89
3995 4058 4.471904 AATTGAGATGCCTCGTGAGTAA 57.528 40.909 0.00 0.00 42.33 2.24
3996 4059 4.401202 TGTAATTGAGATGCCTCGTGAGTA 59.599 41.667 0.00 0.00 42.33 2.59
3997 4060 3.195610 TGTAATTGAGATGCCTCGTGAGT 59.804 43.478 0.00 0.00 42.33 3.41
3998 4061 3.785486 TGTAATTGAGATGCCTCGTGAG 58.215 45.455 0.00 0.00 42.33 3.51
3999 4062 3.885724 TGTAATTGAGATGCCTCGTGA 57.114 42.857 0.00 0.00 42.33 4.35
4000 4063 4.122046 TGATGTAATTGAGATGCCTCGTG 58.878 43.478 0.00 0.00 42.33 4.35
4001 4064 4.406648 TGATGTAATTGAGATGCCTCGT 57.593 40.909 0.00 0.00 42.33 4.18
4002 4065 5.936686 AATGATGTAATTGAGATGCCTCG 57.063 39.130 0.00 0.00 42.33 4.63
4003 4066 5.919141 GCAAATGATGTAATTGAGATGCCTC 59.081 40.000 0.00 0.00 39.86 4.70
4004 4067 5.361571 TGCAAATGATGTAATTGAGATGCCT 59.638 36.000 0.00 0.00 0.00 4.75
4005 4068 5.593968 TGCAAATGATGTAATTGAGATGCC 58.406 37.500 0.00 0.00 0.00 4.40
4006 4069 7.528481 TTTGCAAATGATGTAATTGAGATGC 57.472 32.000 8.05 0.00 33.42 3.91
4007 4070 9.914923 CAATTTGCAAATGATGTAATTGAGATG 57.085 29.630 24.74 10.33 41.07 2.90
4008 4071 9.661563 ACAATTTGCAAATGATGTAATTGAGAT 57.338 25.926 24.74 1.53 41.07 2.75
4012 4075 9.976255 CCTTACAATTTGCAAATGATGTAATTG 57.024 29.630 30.88 24.72 42.48 2.32
4013 4076 8.667463 GCCTTACAATTTGCAAATGATGTAATT 58.333 29.630 30.88 14.25 34.07 1.40
4014 4077 7.823310 TGCCTTACAATTTGCAAATGATGTAAT 59.177 29.630 30.88 14.26 34.07 1.89
4015 4078 7.157347 TGCCTTACAATTTGCAAATGATGTAA 58.843 30.769 29.79 29.79 33.74 2.41
4016 4079 6.695429 TGCCTTACAATTTGCAAATGATGTA 58.305 32.000 24.74 24.02 0.00 2.29
4017 4080 5.549347 TGCCTTACAATTTGCAAATGATGT 58.451 33.333 24.74 24.96 0.00 3.06
4018 4081 5.870433 TCTGCCTTACAATTTGCAAATGATG 59.130 36.000 24.74 21.02 32.58 3.07
4019 4082 6.040209 TCTGCCTTACAATTTGCAAATGAT 57.960 33.333 24.74 17.47 32.58 2.45
4020 4083 5.010922 ACTCTGCCTTACAATTTGCAAATGA 59.989 36.000 24.74 12.92 32.58 2.57
4021 4084 5.232463 ACTCTGCCTTACAATTTGCAAATG 58.768 37.500 24.74 19.33 32.58 2.32
4022 4085 5.473066 ACTCTGCCTTACAATTTGCAAAT 57.527 34.783 18.99 18.99 32.58 2.32
4023 4086 4.935352 ACTCTGCCTTACAATTTGCAAA 57.065 36.364 15.44 15.44 32.58 3.68
4024 4087 6.588719 AATACTCTGCCTTACAATTTGCAA 57.411 33.333 0.00 0.00 32.58 4.08
4025 4088 6.094881 GGTAATACTCTGCCTTACAATTTGCA 59.905 38.462 0.00 0.00 0.00 4.08
4026 4089 6.094881 TGGTAATACTCTGCCTTACAATTTGC 59.905 38.462 0.00 0.00 0.00 3.68
4027 4090 7.624360 TGGTAATACTCTGCCTTACAATTTG 57.376 36.000 0.00 0.00 0.00 2.32
4028 4091 8.275040 AGATGGTAATACTCTGCCTTACAATTT 58.725 33.333 0.00 0.00 0.00 1.82
4029 4092 7.716998 CAGATGGTAATACTCTGCCTTACAATT 59.283 37.037 0.00 0.00 30.91 2.32
4030 4093 7.220030 CAGATGGTAATACTCTGCCTTACAAT 58.780 38.462 0.00 0.00 30.91 2.71
4031 4094 6.408092 CCAGATGGTAATACTCTGCCTTACAA 60.408 42.308 4.65 0.00 36.02 2.41
4032 4095 5.070446 CCAGATGGTAATACTCTGCCTTACA 59.930 44.000 4.65 0.00 36.02 2.41
4033 4096 5.542779 CCAGATGGTAATACTCTGCCTTAC 58.457 45.833 4.65 0.00 36.02 2.34
4034 4097 5.808366 CCAGATGGTAATACTCTGCCTTA 57.192 43.478 4.65 0.00 36.02 2.69
4035 4098 4.696479 CCAGATGGTAATACTCTGCCTT 57.304 45.455 4.65 0.00 36.02 4.35
4049 4112 5.018539 TCGATGTTTACCTTACCAGATGG 57.981 43.478 0.00 0.00 42.17 3.51
4050 4113 5.293569 GGTTCGATGTTTACCTTACCAGATG 59.706 44.000 0.00 0.00 0.00 2.90
4051 4114 5.046159 TGGTTCGATGTTTACCTTACCAGAT 60.046 40.000 4.92 0.00 33.05 2.90
4052 4115 4.283978 TGGTTCGATGTTTACCTTACCAGA 59.716 41.667 4.92 0.00 33.05 3.86
4053 4116 4.571919 TGGTTCGATGTTTACCTTACCAG 58.428 43.478 4.92 0.00 33.05 4.00
4054 4117 4.040706 ACTGGTTCGATGTTTACCTTACCA 59.959 41.667 4.92 1.91 33.05 3.25
4055 4118 4.572909 ACTGGTTCGATGTTTACCTTACC 58.427 43.478 4.92 0.00 33.05 2.85
4056 4119 5.930569 AGAACTGGTTCGATGTTTACCTTAC 59.069 40.000 4.92 0.00 43.97 2.34
4057 4120 6.105397 AGAACTGGTTCGATGTTTACCTTA 57.895 37.500 4.92 0.00 43.97 2.69
4058 4121 4.969484 AGAACTGGTTCGATGTTTACCTT 58.031 39.130 4.92 0.00 43.97 3.50
4059 4122 4.618920 AGAACTGGTTCGATGTTTACCT 57.381 40.909 4.92 0.00 43.97 3.08
4060 4123 6.980051 AATAGAACTGGTTCGATGTTTACC 57.020 37.500 9.19 0.00 43.97 2.85
4065 4128 8.774586 GCAATATAAATAGAACTGGTTCGATGT 58.225 33.333 9.19 7.04 43.97 3.06
4066 4129 8.773645 TGCAATATAAATAGAACTGGTTCGATG 58.226 33.333 9.19 0.30 43.97 3.84
4067 4130 8.902540 TGCAATATAAATAGAACTGGTTCGAT 57.097 30.769 7.67 5.70 43.97 3.59
4068 4131 8.902540 ATGCAATATAAATAGAACTGGTTCGA 57.097 30.769 7.67 3.63 43.97 3.71
4069 4132 8.993121 AGATGCAATATAAATAGAACTGGTTCG 58.007 33.333 7.67 0.00 43.97 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.