Multiple sequence alignment - TraesCS3D01G357400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G357400 chr3D 100.000 6349 0 0 1 6349 470491841 470485493 0.000000e+00 11725.0
1 TraesCS3D01G357400 chr3D 100.000 91 0 0 4112 4202 470487636 470487546 1.090000e-37 169.0
2 TraesCS3D01G357400 chr3D 100.000 91 0 0 4206 4296 470487730 470487640 1.090000e-37 169.0
3 TraesCS3D01G357400 chr3B 92.390 3732 144 59 535 4201 624321671 624318015 0.000000e+00 5190.0
4 TraesCS3D01G357400 chr3B 92.828 1450 51 17 4206 5624 624318106 624316679 0.000000e+00 2052.0
5 TraesCS3D01G357400 chr3B 90.047 422 24 10 5937 6349 624316491 624316079 1.210000e-146 531.0
6 TraesCS3D01G357400 chr3B 92.715 151 8 1 5805 5955 624316687 624316540 1.390000e-51 215.0
7 TraesCS3D01G357400 chr3B 90.071 141 7 4 363 499 624322053 624321916 6.540000e-40 176.0
8 TraesCS3D01G357400 chr3A 90.876 3803 159 77 2 3737 612528951 612525270 0.000000e+00 4927.0
9 TraesCS3D01G357400 chr3A 92.188 1344 58 17 4308 5624 612524652 612523329 0.000000e+00 1857.0
10 TraesCS3D01G357400 chr3A 93.437 579 25 9 3636 4201 612525269 612524691 0.000000e+00 846.0
11 TraesCS3D01G357400 chr3A 91.017 423 28 6 5937 6349 612523140 612522718 4.300000e-156 562.0
12 TraesCS3D01G357400 chr3A 90.132 152 11 3 5805 5955 612523337 612523189 1.810000e-45 195.0
13 TraesCS3D01G357400 chr3A 87.619 105 5 4 4206 4302 612524788 612524684 1.450000e-21 115.0
14 TraesCS3D01G357400 chr3A 81.053 95 17 1 3 97 400644996 400644903 2.450000e-09 75.0
15 TraesCS3D01G357400 chr3A 88.889 54 6 0 3 56 641786493 641786546 4.110000e-07 67.6
16 TraesCS3D01G357400 chr7D 93.973 448 19 3 4466 4905 477931920 477932367 0.000000e+00 671.0
17 TraesCS3D01G357400 chr2A 93.274 446 29 1 4464 4909 138532997 138533441 0.000000e+00 656.0
18 TraesCS3D01G357400 chr2A 100.000 180 0 0 5625 5804 31697496 31697317 3.670000e-87 333.0
19 TraesCS3D01G357400 chr2A 91.667 48 4 0 1 48 773524274 773524321 4.110000e-07 67.6
20 TraesCS3D01G357400 chr4A 93.049 446 29 2 4464 4909 90325603 90325160 0.000000e+00 651.0
21 TraesCS3D01G357400 chr4A 91.572 439 34 3 4464 4902 95390706 95391141 2.530000e-168 603.0
22 TraesCS3D01G357400 chr6B 92.601 446 29 2 4464 4909 275292533 275292092 6.940000e-179 638.0
23 TraesCS3D01G357400 chr6B 98.907 183 2 0 5624 5806 6878490 6878308 1.710000e-85 327.0
24 TraesCS3D01G357400 chr6B 98.333 180 2 1 5625 5804 684219410 684219232 1.330000e-81 315.0
25 TraesCS3D01G357400 chr5A 92.377 446 30 4 4464 4909 582919268 582918827 3.230000e-177 632.0
26 TraesCS3D01G357400 chr5A 89.462 446 32 5 4464 4909 616764696 616764266 3.350000e-152 549.0
27 TraesCS3D01G357400 chr7A 99.462 186 1 0 5619 5804 714589422 714589237 7.880000e-89 339.0
28 TraesCS3D01G357400 chr7A 97.238 181 5 0 5625 5805 709635313 709635493 2.220000e-79 307.0
29 TraesCS3D01G357400 chr2D 100.000 180 0 0 5625 5804 73326073 73325894 3.670000e-87 333.0
30 TraesCS3D01G357400 chr2D 91.111 45 4 0 221 265 15111095 15111139 1.910000e-05 62.1
31 TraesCS3D01G357400 chr7B 98.889 180 2 0 5625 5804 154162649 154162470 7.940000e-84 322.0
32 TraesCS3D01G357400 chr4B 96.809 188 5 1 5617 5804 617203793 617203607 4.780000e-81 313.0
33 TraesCS3D01G357400 chr1B 97.253 182 5 0 5623 5804 661131201 661131020 6.180000e-80 309.0
34 TraesCS3D01G357400 chr1B 74.573 468 61 43 1249 1706 507306454 507306873 1.100000e-32 152.0
35 TraesCS3D01G357400 chr1B 94.118 68 2 2 1121 1187 507306371 507306437 1.130000e-17 102.0
36 TraesCS3D01G357400 chr1B 86.585 82 11 0 2956 3037 342975051 342974970 2.440000e-14 91.6
37 TraesCS3D01G357400 chr1D 74.107 560 70 49 1249 1779 378699501 378700014 1.830000e-35 161.0
38 TraesCS3D01G357400 chr1D 95.312 64 2 1 1124 1187 378699422 378699484 4.050000e-17 100.0
39 TraesCS3D01G357400 chr1D 87.805 82 10 0 2956 3037 269728181 269728100 5.240000e-16 97.1
40 TraesCS3D01G357400 chr1D 94.545 55 2 1 3 56 253521999 253521945 4.080000e-12 84.2
41 TraesCS3D01G357400 chr1A 74.573 468 61 43 1249 1706 479541255 479541674 1.100000e-32 152.0
42 TraesCS3D01G357400 chr1A 87.805 82 10 0 2956 3037 333137367 333137286 5.240000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G357400 chr3D 470485493 470491841 6348 True 11725.0 11725 100.000000 1 6349 1 chr3D.!!$R1 6348
1 TraesCS3D01G357400 chr3B 624316079 624322053 5974 True 1632.8 5190 91.610200 363 6349 5 chr3B.!!$R1 5986
2 TraesCS3D01G357400 chr3A 612522718 612528951 6233 True 1417.0 4927 90.878167 2 6349 6 chr3A.!!$R2 6347

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 305 0.030908 GATGACTTACTCCTCGCCGG 59.969 60.0 0.00 0.00 0.00 6.13 F
2079 2361 0.038892 CAACAATTTGCTGCTCGCCT 60.039 50.0 0.00 0.00 38.05 5.52 F
3326 3632 0.753262 AATAAGATCGGCCGTCAGCT 59.247 50.0 27.15 12.58 43.05 4.24 F
4185 4619 0.615544 AAAGGGGTGCATGGATGGTG 60.616 55.0 0.00 0.00 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2124 2406 0.179029 AAAGGTGTGCTTAGTGCGGT 60.179 50.0 0.00 0.0 46.63 5.68 R
3435 3748 0.107703 TCCATAAAGCCGCTCACCTG 60.108 55.0 0.00 0.0 0.00 4.00 R
4171 4605 0.181114 TCTAGCACCATCCATGCACC 59.819 55.0 0.00 0.0 45.92 5.01 R
5952 6442 0.026285 GCTGCAGCACGGTATTTACG 59.974 55.0 33.36 0.0 41.59 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.812476 CCGGCGTCAATGCGGAGA 62.812 66.667 6.01 0.00 37.37 3.71
64 65 1.360192 GCATAAATGCGGGCTGACC 59.640 57.895 0.00 0.00 44.67 4.02
88 89 3.479269 GACGAGAAAGGGCGCGTG 61.479 66.667 8.43 0.00 44.06 5.34
109 110 1.205055 GAGGGAGAGGGGTTTCGATT 58.795 55.000 0.00 0.00 0.00 3.34
128 129 0.105760 TGGCCATGGTTGTTGGAGTT 60.106 50.000 14.67 0.00 36.26 3.01
131 132 2.166254 GGCCATGGTTGTTGGAGTTATG 59.834 50.000 14.67 0.00 36.26 1.90
132 133 2.825532 GCCATGGTTGTTGGAGTTATGT 59.174 45.455 14.67 0.00 36.26 2.29
133 134 3.367292 GCCATGGTTGTTGGAGTTATGTG 60.367 47.826 14.67 0.00 36.26 3.21
145 146 1.699634 AGTTATGTGTGGCAGTGGTCT 59.300 47.619 0.00 0.00 0.00 3.85
147 148 0.324614 TATGTGTGGCAGTGGTCTGG 59.675 55.000 0.00 0.00 41.57 3.86
148 149 2.281761 GTGTGGCAGTGGTCTGGG 60.282 66.667 0.00 0.00 41.57 4.45
211 212 4.211374 CGAGGAAAAAGACATTCGAACAGT 59.789 41.667 0.00 1.69 0.00 3.55
215 216 5.909610 GGAAAAAGACATTCGAACAGTCAAG 59.090 40.000 25.51 5.23 34.80 3.02
216 217 6.238374 GGAAAAAGACATTCGAACAGTCAAGA 60.238 38.462 25.51 0.00 34.80 3.02
217 218 6.677781 AAAAGACATTCGAACAGTCAAGAA 57.322 33.333 25.51 0.00 34.80 2.52
218 219 5.659048 AAGACATTCGAACAGTCAAGAAC 57.341 39.130 25.51 6.87 34.80 3.01
219 220 4.058817 AGACATTCGAACAGTCAAGAACC 58.941 43.478 25.51 6.32 34.80 3.62
220 221 3.139077 ACATTCGAACAGTCAAGAACCC 58.861 45.455 0.00 0.00 0.00 4.11
232 244 2.875933 TCAAGAACCCACGTTGAATGAC 59.124 45.455 0.00 0.00 30.30 3.06
269 284 2.261671 CGGTCTGGACGGTCTTGG 59.738 66.667 8.23 0.00 0.00 3.61
275 290 1.186200 CTGGACGGTCTTGGAGATGA 58.814 55.000 8.23 0.00 0.00 2.92
282 297 3.444388 ACGGTCTTGGAGATGACTTACTC 59.556 47.826 0.00 0.00 34.01 2.59
287 302 2.785713 GGAGATGACTTACTCCTCGC 57.214 55.000 0.00 0.00 46.28 5.03
289 304 1.002251 GAGATGACTTACTCCTCGCCG 60.002 57.143 0.00 0.00 0.00 6.46
290 305 0.030908 GATGACTTACTCCTCGCCGG 59.969 60.000 0.00 0.00 0.00 6.13
291 306 1.392710 ATGACTTACTCCTCGCCGGG 61.393 60.000 2.18 0.00 0.00 5.73
292 307 2.036890 ACTTACTCCTCGCCGGGT 59.963 61.111 2.18 0.00 0.00 5.28
293 308 2.280823 GACTTACTCCTCGCCGGGTG 62.281 65.000 2.18 0.00 0.00 4.61
294 309 3.718210 CTTACTCCTCGCCGGGTGC 62.718 68.421 2.18 0.00 0.00 5.01
295 310 4.753662 TACTCCTCGCCGGGTGCT 62.754 66.667 2.18 0.00 38.05 4.40
306 321 4.344865 GGGTGCTGGGCCGAAGAA 62.345 66.667 8.22 0.00 0.00 2.52
393 408 6.142818 GCAAATGCATAGTTACCATTACCA 57.857 37.500 0.00 0.00 41.59 3.25
394 409 5.977129 GCAAATGCATAGTTACCATTACCAC 59.023 40.000 0.00 0.00 41.59 4.16
401 416 3.332034 AGTTACCATTACCACGAGCAAC 58.668 45.455 0.00 0.00 0.00 4.17
413 428 0.804364 CGAGCAACTGCAAGCCAATA 59.196 50.000 4.22 0.00 45.16 1.90
415 430 2.730090 CGAGCAACTGCAAGCCAATAAG 60.730 50.000 4.22 0.00 45.16 1.73
416 431 2.229784 GAGCAACTGCAAGCCAATAAGT 59.770 45.455 4.22 0.00 45.16 2.24
418 433 2.030007 GCAACTGCAAGCCAATAAGTCA 60.030 45.455 0.00 0.00 41.59 3.41
499 522 0.905357 AGCAGGCCTATTTCACTCGT 59.095 50.000 3.98 0.00 0.00 4.18
501 524 1.134670 GCAGGCCTATTTCACTCGTCT 60.135 52.381 3.98 0.00 0.00 4.18
530 559 2.174424 GCTCCCTCCATTCTCCATTTCT 59.826 50.000 0.00 0.00 0.00 2.52
531 560 3.372458 GCTCCCTCCATTCTCCATTTCTT 60.372 47.826 0.00 0.00 0.00 2.52
532 561 4.864726 CTCCCTCCATTCTCCATTTCTTT 58.135 43.478 0.00 0.00 0.00 2.52
533 562 4.860022 TCCCTCCATTCTCCATTTCTTTC 58.140 43.478 0.00 0.00 0.00 2.62
558 790 1.057976 CTCGCTTTCGCTTTCTCGC 59.942 57.895 0.00 0.00 35.26 5.03
562 794 0.453449 GCTTTCGCTTTCTCGCCTTG 60.453 55.000 0.00 0.00 0.00 3.61
610 842 2.219325 CTTTCACCGCCTCGCTCTCT 62.219 60.000 0.00 0.00 0.00 3.10
636 872 2.291741 CTCGCCTTTGCAGAAAGAAAGT 59.708 45.455 0.00 0.00 41.12 2.66
660 900 4.589675 GGCCCGAACCCAACCACA 62.590 66.667 0.00 0.00 0.00 4.17
661 901 3.292159 GCCCGAACCCAACCACAC 61.292 66.667 0.00 0.00 0.00 3.82
662 902 2.596338 CCCGAACCCAACCACACC 60.596 66.667 0.00 0.00 0.00 4.16
663 903 2.193517 CCGAACCCAACCACACCA 59.806 61.111 0.00 0.00 0.00 4.17
664 904 1.454111 CCGAACCCAACCACACCAA 60.454 57.895 0.00 0.00 0.00 3.67
670 910 1.391157 CCCAACCACACCAACACCAG 61.391 60.000 0.00 0.00 0.00 4.00
673 913 1.037030 AACCACACCAACACCAGCAG 61.037 55.000 0.00 0.00 0.00 4.24
741 981 3.871574 GAGAGCGAGCGAGCGAGT 61.872 66.667 1.41 0.00 43.00 4.18
978 1247 3.746889 CCACCCACCGCGTACGTA 61.747 66.667 17.90 0.00 37.70 3.57
1099 1380 2.033911 ATGCACACCACATGGCGA 59.966 55.556 0.00 0.00 39.32 5.54
1230 1511 4.704833 CTCGCCCACCACCACCAG 62.705 72.222 0.00 0.00 0.00 4.00
1236 1517 2.981909 CACCACCACCAGCAGCAG 60.982 66.667 0.00 0.00 0.00 4.24
1239 1520 3.667282 CACCACCAGCAGCAGCAC 61.667 66.667 3.17 0.00 45.49 4.40
1605 1886 2.105128 GAGATCTGCGACGTGGGG 59.895 66.667 0.00 0.00 0.00 4.96
1780 2061 1.489649 CCATGATGGAAGAGGTGAGCT 59.510 52.381 5.27 0.00 40.96 4.09
1781 2062 2.702478 CCATGATGGAAGAGGTGAGCTA 59.298 50.000 5.27 0.00 40.96 3.32
1782 2063 3.244146 CCATGATGGAAGAGGTGAGCTAG 60.244 52.174 5.27 0.00 40.96 3.42
1783 2064 1.759445 TGATGGAAGAGGTGAGCTAGC 59.241 52.381 6.62 6.62 0.00 3.42
1908 2189 1.927210 GCACATAGCGGTCACATCG 59.073 57.895 0.00 0.00 0.00 3.84
2079 2361 0.038892 CAACAATTTGCTGCTCGCCT 60.039 50.000 0.00 0.00 38.05 5.52
2124 2406 9.076781 TCAAAGATTGGATGTTGATTAGTTTCA 57.923 29.630 0.00 0.00 0.00 2.69
2206 2488 1.014564 GTCCTCGAACGCTTTGGGAG 61.015 60.000 0.00 0.00 0.00 4.30
2310 2592 3.117054 AGGATAGGAGTACTTGACCCTCC 60.117 52.174 4.19 7.04 44.22 4.30
2348 2630 2.622064 CCTCTGGGGCAATACTGTAC 57.378 55.000 0.00 0.00 0.00 2.90
2360 2642 5.470098 GGCAATACTGTACATAACATGGGAG 59.530 44.000 0.00 0.00 37.50 4.30
2529 2816 2.827322 CACATGAAATCCAAAGCTCCCA 59.173 45.455 0.00 0.00 0.00 4.37
2569 2865 6.821616 ATCTTTCCCATCTTCATGAGTAGT 57.178 37.500 0.00 0.00 30.57 2.73
2583 2879 5.475220 TCATGAGTAGTAGCTGCTTATCTCC 59.525 44.000 10.41 0.00 0.00 3.71
2584 2880 5.055265 TGAGTAGTAGCTGCTTATCTCCT 57.945 43.478 10.41 0.81 0.00 3.69
2585 2881 5.067273 TGAGTAGTAGCTGCTTATCTCCTC 58.933 45.833 10.41 10.43 0.00 3.71
2594 2890 5.602145 AGCTGCTTATCTCCTCTAATCAAGT 59.398 40.000 0.00 0.00 0.00 3.16
2600 2896 7.174599 GCTTATCTCCTCTAATCAAGTACCGTA 59.825 40.741 0.00 0.00 0.00 4.02
2601 2897 6.880942 ATCTCCTCTAATCAAGTACCGTAC 57.119 41.667 0.00 0.00 0.00 3.67
2602 2898 5.999044 TCTCCTCTAATCAAGTACCGTACT 58.001 41.667 5.31 5.31 41.73 2.73
2603 2899 6.054295 TCTCCTCTAATCAAGTACCGTACTC 58.946 44.000 11.66 0.00 38.26 2.59
2610 2906 5.573337 ATCAAGTACCGTACTCACTTACC 57.427 43.478 11.66 0.00 38.26 2.85
2620 2916 3.340814 ACTCACTTACCAATCCAGCTG 57.659 47.619 6.78 6.78 0.00 4.24
2634 2930 2.305635 TCCAGCTGCAATTAACCTCTCA 59.694 45.455 8.66 0.00 0.00 3.27
2636 2932 3.314635 CCAGCTGCAATTAACCTCTCATC 59.685 47.826 8.66 0.00 0.00 2.92
2639 2935 4.080695 AGCTGCAATTAACCTCTCATCTCA 60.081 41.667 1.02 0.00 0.00 3.27
2640 2936 4.820716 GCTGCAATTAACCTCTCATCTCAT 59.179 41.667 0.00 0.00 0.00 2.90
2641 2937 5.298777 GCTGCAATTAACCTCTCATCTCATT 59.701 40.000 0.00 0.00 0.00 2.57
2642 2938 6.513066 GCTGCAATTAACCTCTCATCTCATTC 60.513 42.308 0.00 0.00 0.00 2.67
2643 2939 6.656902 TGCAATTAACCTCTCATCTCATTCT 58.343 36.000 0.00 0.00 0.00 2.40
2644 2940 7.795047 TGCAATTAACCTCTCATCTCATTCTA 58.205 34.615 0.00 0.00 0.00 2.10
2645 2941 7.712639 TGCAATTAACCTCTCATCTCATTCTAC 59.287 37.037 0.00 0.00 0.00 2.59
2646 2942 7.930865 GCAATTAACCTCTCATCTCATTCTACT 59.069 37.037 0.00 0.00 0.00 2.57
2647 2943 9.829507 CAATTAACCTCTCATCTCATTCTACTT 57.170 33.333 0.00 0.00 0.00 2.24
2720 3016 3.362797 TCGTTCGAGAGCGTGGCT 61.363 61.111 9.01 0.00 43.88 4.75
2834 3130 1.210931 CAACACCAGCAAGATGCCG 59.789 57.895 0.00 0.00 46.52 5.69
3049 3345 4.083855 GCACCCGTAAGTTGTTTTACTACC 60.084 45.833 0.00 0.00 32.58 3.18
3183 3484 5.582665 GGACCTCTAGTTGTTTTAGCTGATG 59.417 44.000 0.00 0.00 0.00 3.07
3316 3622 9.814899 ATCATTCTATTGGAGCTAATAAGATCG 57.185 33.333 0.00 0.00 39.11 3.69
3317 3623 8.253810 TCATTCTATTGGAGCTAATAAGATCGG 58.746 37.037 0.00 0.00 39.11 4.18
3324 3630 2.029828 AGCTAATAAGATCGGCCGTCAG 60.030 50.000 27.15 14.62 0.00 3.51
3325 3631 2.329379 CTAATAAGATCGGCCGTCAGC 58.671 52.381 27.15 9.95 42.60 4.26
3326 3632 0.753262 AATAAGATCGGCCGTCAGCT 59.247 50.000 27.15 12.58 43.05 4.24
3332 3639 1.735571 GATCGGCCGTCAGCTTTTTAA 59.264 47.619 27.15 0.03 43.05 1.52
3336 3643 1.877443 GGCCGTCAGCTTTTTAAGACA 59.123 47.619 0.00 0.00 43.05 3.41
3404 3711 3.766051 GGTCCTCCATTTTGCATCTTTCT 59.234 43.478 0.00 0.00 0.00 2.52
3406 3713 5.418840 GGTCCTCCATTTTGCATCTTTCTTA 59.581 40.000 0.00 0.00 0.00 2.10
3407 3714 6.405176 GGTCCTCCATTTTGCATCTTTCTTAG 60.405 42.308 0.00 0.00 0.00 2.18
3408 3715 6.375455 GTCCTCCATTTTGCATCTTTCTTAGA 59.625 38.462 0.00 0.00 37.28 2.10
3409 3716 6.375455 TCCTCCATTTTGCATCTTTCTTAGAC 59.625 38.462 0.00 0.00 35.19 2.59
3410 3717 6.151648 CCTCCATTTTGCATCTTTCTTAGACA 59.848 38.462 0.00 0.00 35.19 3.41
3435 3748 9.661187 CATTTGCATGACTTTCTAACTATCATC 57.339 33.333 0.00 0.00 31.07 2.92
3759 4178 7.895429 AGATCTTTCCATTTCCAACTGGATTTA 59.105 33.333 0.00 0.00 44.98 1.40
3829 4249 3.944087 TGAAGCCTCTAGAAAGAAAGGC 58.056 45.455 9.81 9.81 41.35 4.35
3893 4314 8.946085 CACCAATCAGTGCTTAGATTTAACTTA 58.054 33.333 0.00 0.00 32.43 2.24
3925 4346 1.852633 AAAAGGCCTACTTGGATGGC 58.147 50.000 5.16 0.00 45.42 4.40
3932 4353 1.412710 CCTACTTGGATGGCGCTAGAA 59.587 52.381 7.64 0.00 38.35 2.10
3980 4401 8.167605 TGAAACCTTTATTTTTGGTATGTCGA 57.832 30.769 0.00 0.00 33.17 4.20
4083 4511 2.583143 ACACTACCTGGCTTGTTTTCC 58.417 47.619 0.00 0.00 0.00 3.13
4128 4559 7.981225 ACACTGGGCAATCAAATATAATTGTTC 59.019 33.333 0.57 0.00 35.70 3.18
4129 4560 7.439056 CACTGGGCAATCAAATATAATTGTTCC 59.561 37.037 0.57 2.76 35.70 3.62
4130 4561 7.345392 ACTGGGCAATCAAATATAATTGTTCCT 59.655 33.333 0.57 0.00 35.70 3.36
4154 4588 7.080353 TCACATCAATCAGTGCTTAGATTTG 57.920 36.000 0.00 0.00 35.76 2.32
4158 4592 7.175467 ACATCAATCAGTGCTTAGATTTGAACA 59.825 33.333 0.00 0.00 32.43 3.18
4174 4608 7.611855 AGATTTGAACATACTCTTAAAGGGGTG 59.388 37.037 0.00 0.00 0.00 4.61
4175 4609 4.585879 TGAACATACTCTTAAAGGGGTGC 58.414 43.478 0.00 0.00 0.00 5.01
4176 4610 4.042311 TGAACATACTCTTAAAGGGGTGCA 59.958 41.667 0.00 0.00 0.00 4.57
4177 4611 4.862641 ACATACTCTTAAAGGGGTGCAT 57.137 40.909 0.00 0.00 0.00 3.96
4178 4612 4.526970 ACATACTCTTAAAGGGGTGCATG 58.473 43.478 0.00 0.00 0.00 4.06
4179 4613 2.514458 ACTCTTAAAGGGGTGCATGG 57.486 50.000 0.00 0.00 0.00 3.66
4180 4614 1.992557 ACTCTTAAAGGGGTGCATGGA 59.007 47.619 0.00 0.00 0.00 3.41
4181 4615 2.582636 ACTCTTAAAGGGGTGCATGGAT 59.417 45.455 0.00 0.00 0.00 3.41
4182 4616 2.954318 CTCTTAAAGGGGTGCATGGATG 59.046 50.000 0.00 0.00 0.00 3.51
4183 4617 2.034124 CTTAAAGGGGTGCATGGATGG 58.966 52.381 0.00 0.00 0.00 3.51
4184 4618 1.006813 TAAAGGGGTGCATGGATGGT 58.993 50.000 0.00 0.00 0.00 3.55
4185 4619 0.615544 AAAGGGGTGCATGGATGGTG 60.616 55.000 0.00 0.00 0.00 4.17
4186 4620 3.149648 GGGGTGCATGGATGGTGC 61.150 66.667 0.00 0.00 42.81 5.01
4187 4621 2.043652 GGGTGCATGGATGGTGCT 60.044 61.111 0.00 0.00 42.92 4.40
4188 4622 1.227102 GGGTGCATGGATGGTGCTA 59.773 57.895 0.00 0.00 42.92 3.49
4189 4623 0.820891 GGGTGCATGGATGGTGCTAG 60.821 60.000 0.00 0.00 42.92 3.42
4190 4624 0.181114 GGTGCATGGATGGTGCTAGA 59.819 55.000 0.00 0.00 42.92 2.43
4191 4625 1.303309 GTGCATGGATGGTGCTAGAC 58.697 55.000 0.00 0.00 42.92 2.59
4192 4626 1.134280 GTGCATGGATGGTGCTAGACT 60.134 52.381 0.00 0.00 42.92 3.24
4193 4627 1.134310 TGCATGGATGGTGCTAGACTG 60.134 52.381 0.00 0.00 42.92 3.51
4194 4628 1.139654 GCATGGATGGTGCTAGACTGA 59.860 52.381 0.00 0.00 39.45 3.41
4195 4629 2.224475 GCATGGATGGTGCTAGACTGAT 60.224 50.000 0.00 0.00 39.45 2.90
4196 4630 3.007290 GCATGGATGGTGCTAGACTGATA 59.993 47.826 0.00 0.00 39.45 2.15
4197 4631 4.503817 GCATGGATGGTGCTAGACTGATAA 60.504 45.833 0.00 0.00 39.45 1.75
4198 4632 5.614308 CATGGATGGTGCTAGACTGATAAA 58.386 41.667 0.00 0.00 0.00 1.40
4199 4633 5.692115 TGGATGGTGCTAGACTGATAAAA 57.308 39.130 0.00 0.00 0.00 1.52
4200 4634 5.674525 TGGATGGTGCTAGACTGATAAAAG 58.325 41.667 0.00 0.00 0.00 2.27
4201 4635 4.513318 GGATGGTGCTAGACTGATAAAAGC 59.487 45.833 0.00 0.00 0.00 3.51
4202 4636 3.873910 TGGTGCTAGACTGATAAAAGCC 58.126 45.455 0.00 0.00 32.14 4.35
4203 4637 3.519510 TGGTGCTAGACTGATAAAAGCCT 59.480 43.478 0.00 0.00 32.14 4.58
4204 4638 3.873952 GGTGCTAGACTGATAAAAGCCTG 59.126 47.826 0.00 0.00 32.14 4.85
4205 4639 4.383118 GGTGCTAGACTGATAAAAGCCTGA 60.383 45.833 0.00 0.00 32.14 3.86
4206 4640 5.178797 GTGCTAGACTGATAAAAGCCTGAA 58.821 41.667 0.00 0.00 32.14 3.02
4207 4641 5.819901 GTGCTAGACTGATAAAAGCCTGAAT 59.180 40.000 0.00 0.00 32.14 2.57
4208 4642 6.018343 GTGCTAGACTGATAAAAGCCTGAATC 60.018 42.308 0.00 0.00 32.14 2.52
4209 4643 6.051717 GCTAGACTGATAAAAGCCTGAATCA 58.948 40.000 0.00 0.00 0.00 2.57
4210 4644 6.540189 GCTAGACTGATAAAAGCCTGAATCAA 59.460 38.462 0.00 0.00 0.00 2.57
4211 4645 7.066284 GCTAGACTGATAAAAGCCTGAATCAAA 59.934 37.037 0.00 0.00 0.00 2.69
4212 4646 7.951347 AGACTGATAAAAGCCTGAATCAAAT 57.049 32.000 0.00 0.00 0.00 2.32
4214 4648 9.638176 AGACTGATAAAAGCCTGAATCAAATAT 57.362 29.630 0.00 0.00 0.00 1.28
4223 4657 9.822185 AAAGCCTGAATCAAATATAATTGTTCC 57.178 29.630 0.57 0.00 0.00 3.62
4224 4658 8.773033 AGCCTGAATCAAATATAATTGTTCCT 57.227 30.769 0.57 0.00 0.00 3.36
4225 4659 8.854117 AGCCTGAATCAAATATAATTGTTCCTC 58.146 33.333 0.57 0.00 0.00 3.71
4226 4660 8.632679 GCCTGAATCAAATATAATTGTTCCTCA 58.367 33.333 0.57 0.42 0.00 3.86
4227 4661 9.956720 CCTGAATCAAATATAATTGTTCCTCAC 57.043 33.333 0.57 0.00 0.00 3.51
4237 4671 9.857656 ATATAATTGTTCCTCACATCAATCAGT 57.142 29.630 0.00 0.00 34.43 3.41
4238 4672 5.892160 ATTGTTCCTCACATCAATCAGTG 57.108 39.130 0.00 0.00 34.43 3.66
4239 4673 3.076621 TGTTCCTCACATCAATCAGTGC 58.923 45.455 0.00 0.00 35.76 4.40
4240 4674 3.244665 TGTTCCTCACATCAATCAGTGCT 60.245 43.478 0.00 0.00 35.76 4.40
4241 4675 3.708403 TCCTCACATCAATCAGTGCTT 57.292 42.857 0.00 0.00 35.76 3.91
4242 4676 4.824479 TCCTCACATCAATCAGTGCTTA 57.176 40.909 0.00 0.00 35.76 3.09
4243 4677 4.763073 TCCTCACATCAATCAGTGCTTAG 58.237 43.478 0.00 0.00 35.76 2.18
4244 4678 4.467438 TCCTCACATCAATCAGTGCTTAGA 59.533 41.667 0.00 0.00 35.76 2.10
4245 4679 5.129980 TCCTCACATCAATCAGTGCTTAGAT 59.870 40.000 0.00 0.00 35.76 1.98
4246 4680 5.821470 CCTCACATCAATCAGTGCTTAGATT 59.179 40.000 0.00 0.00 35.76 2.40
4247 4681 6.318144 CCTCACATCAATCAGTGCTTAGATTT 59.682 38.462 0.00 0.00 35.76 2.17
4248 4682 7.080353 TCACATCAATCAGTGCTTAGATTTG 57.920 36.000 0.00 0.00 35.76 2.32
4249 4683 6.880529 TCACATCAATCAGTGCTTAGATTTGA 59.119 34.615 0.00 0.00 35.76 2.69
4250 4684 7.391275 TCACATCAATCAGTGCTTAGATTTGAA 59.609 33.333 0.00 0.00 35.76 2.69
4251 4685 7.484007 CACATCAATCAGTGCTTAGATTTGAAC 59.516 37.037 0.00 0.00 32.43 3.18
4252 4686 7.175467 ACATCAATCAGTGCTTAGATTTGAACA 59.825 33.333 0.00 0.00 32.43 3.18
4295 4729 4.513318 GGATGGTGCTAGACTGATAAAAGC 59.487 45.833 0.00 0.00 0.00 3.51
4302 4736 7.148171 GGTGCTAGACTGATAAAAGCAATTCTT 60.148 37.037 0.00 0.00 44.16 2.52
4303 4737 7.695618 GTGCTAGACTGATAAAAGCAATTCTTG 59.304 37.037 0.00 0.00 44.16 3.02
4304 4738 7.391554 TGCTAGACTGATAAAAGCAATTCTTGT 59.608 33.333 0.00 0.00 40.05 3.16
4305 4739 7.695618 GCTAGACTGATAAAAGCAATTCTTGTG 59.304 37.037 0.00 0.00 34.67 3.33
4314 4774 1.738030 GCAATTCTTGTGGATGCTGCC 60.738 52.381 0.00 0.00 34.29 4.85
4418 4878 1.742761 ATTCACACTGGGCAATCTCG 58.257 50.000 0.00 0.00 0.00 4.04
4435 4895 4.295857 TCTCGTATAATAGTTGCGTGCA 57.704 40.909 0.00 0.00 0.00 4.57
4489 4949 3.853307 GCATCTCCCTTTTGAACGTGTTG 60.853 47.826 0.00 0.00 0.00 3.33
4524 4988 2.796593 TGCTGCATTCGTCTGATATTCG 59.203 45.455 0.00 0.00 0.00 3.34
4527 4991 2.102420 TGCATTCGTCTGATATTCGGGT 59.898 45.455 0.00 0.00 0.00 5.28
4534 4998 4.081862 TCGTCTGATATTCGGGTTGAAACT 60.082 41.667 0.00 0.00 40.71 2.66
4650 5114 5.531634 ACCACTAGCATGTCATTTTGTTTG 58.468 37.500 0.00 0.00 0.00 2.93
4666 5130 1.021202 TTTGTGGAGCTTGGTTGACG 58.979 50.000 0.00 0.00 0.00 4.35
4722 5186 2.032634 TTCATCAACGCGAGGGTGC 61.033 57.895 15.93 0.00 0.00 5.01
4809 5273 3.241530 ACGACAAGGGCCAGCAGA 61.242 61.111 6.18 0.00 0.00 4.26
4835 5299 4.641645 CACGGCCAGGCTCACCAA 62.642 66.667 12.43 0.00 39.06 3.67
5113 5589 2.434185 CCACCACCATCACGTCGG 60.434 66.667 0.00 0.00 0.00 4.79
5327 5809 4.593864 GAGATCGGCGGCCACCTC 62.594 72.222 20.71 16.67 0.00 3.85
5352 5834 0.812549 TGATTTCGTCGGGTGATCGA 59.187 50.000 0.00 0.00 36.76 3.59
5410 5898 1.785768 TGTTGTAATGTACGCACGCT 58.214 45.000 0.00 0.00 0.00 5.07
5418 5906 2.503158 TACGCACGCTACGCACTG 60.503 61.111 0.00 0.00 0.00 3.66
5546 6034 3.245016 TGAAACATTGACATGCCCTCTCT 60.245 43.478 0.00 0.00 33.05 3.10
5547 6035 2.706339 ACATTGACATGCCCTCTCTC 57.294 50.000 0.00 0.00 33.05 3.20
5587 6076 4.942761 ATTCAAACAGCTGTCCAACATT 57.057 36.364 21.95 6.60 0.00 2.71
5588 6077 3.713858 TCAAACAGCTGTCCAACATTG 57.286 42.857 21.95 18.92 0.00 2.82
5589 6078 2.129607 CAAACAGCTGTCCAACATTGC 58.870 47.619 21.95 0.00 0.00 3.56
5590 6079 1.696063 AACAGCTGTCCAACATTGCT 58.304 45.000 21.95 0.00 30.88 3.91
5591 6080 1.242076 ACAGCTGTCCAACATTGCTC 58.758 50.000 15.25 0.00 28.65 4.26
5601 6090 2.624838 CCAACATTGCTCTCAAACACCT 59.375 45.455 0.00 0.00 35.56 4.00
5624 6113 1.002430 TGGGCTACACAGAGCTTGAAG 59.998 52.381 0.00 0.00 42.43 3.02
5625 6114 1.276421 GGGCTACACAGAGCTTGAAGA 59.724 52.381 0.00 0.00 42.43 2.87
5626 6115 2.615869 GGCTACACAGAGCTTGAAGAG 58.384 52.381 0.00 0.00 42.43 2.85
5638 6127 3.921969 CTTGAAGAGCAATGCTAGACG 57.078 47.619 8.12 0.00 39.88 4.18
5639 6128 3.257393 CTTGAAGAGCAATGCTAGACGT 58.743 45.455 8.12 0.00 39.88 4.34
5640 6129 4.424626 CTTGAAGAGCAATGCTAGACGTA 58.575 43.478 8.12 0.00 39.88 3.57
5641 6130 3.770666 TGAAGAGCAATGCTAGACGTAC 58.229 45.455 8.12 0.00 39.88 3.67
5642 6131 2.476873 AGAGCAATGCTAGACGTACG 57.523 50.000 15.01 15.01 39.88 3.67
5643 6132 1.065701 AGAGCAATGCTAGACGTACGG 59.934 52.381 21.06 2.24 39.88 4.02
5644 6133 0.102481 AGCAATGCTAGACGTACGGG 59.898 55.000 21.06 7.74 36.99 5.28
5645 6134 1.488261 GCAATGCTAGACGTACGGGC 61.488 60.000 21.06 17.10 0.00 6.13
5646 6135 1.065273 AATGCTAGACGTACGGGCG 59.935 57.895 21.06 6.01 37.94 6.13
5648 6137 1.660560 ATGCTAGACGTACGGGCGTT 61.661 55.000 21.06 0.00 45.79 4.84
5649 6138 1.870901 GCTAGACGTACGGGCGTTG 60.871 63.158 21.06 5.63 45.79 4.10
5650 6139 1.503542 CTAGACGTACGGGCGTTGT 59.496 57.895 21.06 0.00 45.79 3.32
5651 6140 0.726827 CTAGACGTACGGGCGTTGTA 59.273 55.000 21.06 0.00 45.79 2.41
5652 6141 0.446222 TAGACGTACGGGCGTTGTAC 59.554 55.000 21.06 3.96 45.79 2.90
5655 6144 2.506881 GTACGGGCGTTGTACGGG 60.507 66.667 1.14 0.00 42.82 5.28
5656 6145 3.757828 TACGGGCGTTGTACGGGG 61.758 66.667 1.14 0.00 42.82 5.73
5659 6148 3.789290 GGGCGTTGTACGGGGGAT 61.789 66.667 1.14 0.00 42.82 3.85
5660 6149 2.269883 GGCGTTGTACGGGGGATT 59.730 61.111 1.14 0.00 42.82 3.01
5661 6150 1.377594 GGCGTTGTACGGGGGATTT 60.378 57.895 1.14 0.00 42.82 2.17
5662 6151 0.107752 GGCGTTGTACGGGGGATTTA 60.108 55.000 1.14 0.00 42.82 1.40
5663 6152 1.009078 GCGTTGTACGGGGGATTTAC 58.991 55.000 1.14 0.00 42.82 2.01
5664 6153 1.675415 GCGTTGTACGGGGGATTTACA 60.675 52.381 1.14 0.00 42.82 2.41
5665 6154 2.273557 CGTTGTACGGGGGATTTACAG 58.726 52.381 0.00 0.00 38.08 2.74
5666 6155 2.635714 GTTGTACGGGGGATTTACAGG 58.364 52.381 0.00 0.00 0.00 4.00
5667 6156 0.542805 TGTACGGGGGATTTACAGGC 59.457 55.000 0.00 0.00 0.00 4.85
5668 6157 0.835276 GTACGGGGGATTTACAGGCT 59.165 55.000 0.00 0.00 0.00 4.58
5669 6158 1.125633 TACGGGGGATTTACAGGCTC 58.874 55.000 0.00 0.00 0.00 4.70
5670 6159 1.227556 CGGGGGATTTACAGGCTCG 60.228 63.158 0.00 0.00 0.00 5.03
5671 6160 1.912971 GGGGGATTTACAGGCTCGT 59.087 57.895 0.00 0.00 0.00 4.18
5672 6161 0.255033 GGGGGATTTACAGGCTCGTT 59.745 55.000 0.00 0.00 0.00 3.85
5673 6162 1.379527 GGGGATTTACAGGCTCGTTG 58.620 55.000 0.00 0.00 0.00 4.10
5674 6163 1.065709 GGGGATTTACAGGCTCGTTGA 60.066 52.381 0.00 0.00 0.00 3.18
5675 6164 2.007608 GGGATTTACAGGCTCGTTGAC 58.992 52.381 0.00 0.00 0.00 3.18
5676 6165 2.354805 GGGATTTACAGGCTCGTTGACT 60.355 50.000 0.00 0.00 0.00 3.41
5681 6170 3.521995 CAGGCTCGTTGACTGTGAT 57.478 52.632 5.99 0.00 46.57 3.06
5682 6171 1.800805 CAGGCTCGTTGACTGTGATT 58.199 50.000 5.99 0.00 46.57 2.57
5683 6172 1.462283 CAGGCTCGTTGACTGTGATTG 59.538 52.381 5.99 0.00 46.57 2.67
5684 6173 0.798776 GGCTCGTTGACTGTGATTGG 59.201 55.000 0.00 0.00 0.00 3.16
5685 6174 1.512926 GCTCGTTGACTGTGATTGGT 58.487 50.000 0.00 0.00 0.00 3.67
5686 6175 1.873591 GCTCGTTGACTGTGATTGGTT 59.126 47.619 0.00 0.00 0.00 3.67
5687 6176 2.349817 GCTCGTTGACTGTGATTGGTTG 60.350 50.000 0.00 0.00 0.00 3.77
5688 6177 2.217750 TCGTTGACTGTGATTGGTTGG 58.782 47.619 0.00 0.00 0.00 3.77
5689 6178 2.158885 TCGTTGACTGTGATTGGTTGGA 60.159 45.455 0.00 0.00 0.00 3.53
5690 6179 2.616376 CGTTGACTGTGATTGGTTGGAA 59.384 45.455 0.00 0.00 0.00 3.53
5691 6180 3.253188 CGTTGACTGTGATTGGTTGGAAT 59.747 43.478 0.00 0.00 0.00 3.01
5692 6181 4.454161 CGTTGACTGTGATTGGTTGGAATA 59.546 41.667 0.00 0.00 0.00 1.75
5693 6182 5.123820 CGTTGACTGTGATTGGTTGGAATAT 59.876 40.000 0.00 0.00 0.00 1.28
5694 6183 6.324819 GTTGACTGTGATTGGTTGGAATATG 58.675 40.000 0.00 0.00 0.00 1.78
5695 6184 5.814481 TGACTGTGATTGGTTGGAATATGA 58.186 37.500 0.00 0.00 0.00 2.15
5696 6185 6.425735 TGACTGTGATTGGTTGGAATATGAT 58.574 36.000 0.00 0.00 0.00 2.45
5697 6186 6.891361 TGACTGTGATTGGTTGGAATATGATT 59.109 34.615 0.00 0.00 0.00 2.57
5698 6187 8.052141 TGACTGTGATTGGTTGGAATATGATTA 58.948 33.333 0.00 0.00 0.00 1.75
5699 6188 8.821686 ACTGTGATTGGTTGGAATATGATTAA 57.178 30.769 0.00 0.00 0.00 1.40
5700 6189 8.906867 ACTGTGATTGGTTGGAATATGATTAAG 58.093 33.333 0.00 0.00 0.00 1.85
5701 6190 8.236585 TGTGATTGGTTGGAATATGATTAAGG 57.763 34.615 0.00 0.00 0.00 2.69
5702 6191 7.287466 TGTGATTGGTTGGAATATGATTAAGGG 59.713 37.037 0.00 0.00 0.00 3.95
5703 6192 6.782000 TGATTGGTTGGAATATGATTAAGGGG 59.218 38.462 0.00 0.00 0.00 4.79
5704 6193 5.073437 TGGTTGGAATATGATTAAGGGGG 57.927 43.478 0.00 0.00 0.00 5.40
5705 6194 4.734503 TGGTTGGAATATGATTAAGGGGGA 59.265 41.667 0.00 0.00 0.00 4.81
5706 6195 5.077564 GGTTGGAATATGATTAAGGGGGAC 58.922 45.833 0.00 0.00 0.00 4.46
5707 6196 4.634012 TGGAATATGATTAAGGGGGACG 57.366 45.455 0.00 0.00 0.00 4.79
5708 6197 3.329520 TGGAATATGATTAAGGGGGACGG 59.670 47.826 0.00 0.00 0.00 4.79
5709 6198 3.344515 GAATATGATTAAGGGGGACGGC 58.655 50.000 0.00 0.00 0.00 5.68
5710 6199 1.061546 TATGATTAAGGGGGACGGCC 58.938 55.000 0.00 0.00 0.00 6.13
5721 6210 3.961414 GACGGCCCCACCCTGAAA 61.961 66.667 0.00 0.00 33.26 2.69
5722 6211 3.501040 GACGGCCCCACCCTGAAAA 62.501 63.158 0.00 0.00 33.26 2.29
5723 6212 2.037208 CGGCCCCACCCTGAAAAT 59.963 61.111 0.00 0.00 33.26 1.82
5724 6213 2.052104 CGGCCCCACCCTGAAAATC 61.052 63.158 0.00 0.00 33.26 2.17
5725 6214 1.078347 GGCCCCACCCTGAAAATCA 59.922 57.895 0.00 0.00 0.00 2.57
5726 6215 0.972471 GGCCCCACCCTGAAAATCAG 60.972 60.000 0.00 0.32 43.91 2.90
5748 6237 3.157881 GGGGGAAGCAATTAGATTAGGC 58.842 50.000 0.00 0.00 0.00 3.93
5749 6238 3.157881 GGGGAAGCAATTAGATTAGGCC 58.842 50.000 0.00 0.00 0.00 5.19
5750 6239 3.436470 GGGGAAGCAATTAGATTAGGCCA 60.436 47.826 5.01 0.00 0.00 5.36
5751 6240 3.570125 GGGAAGCAATTAGATTAGGCCAC 59.430 47.826 5.01 0.00 0.00 5.01
5752 6241 3.251004 GGAAGCAATTAGATTAGGCCACG 59.749 47.826 5.01 0.00 0.00 4.94
5753 6242 2.851195 AGCAATTAGATTAGGCCACGG 58.149 47.619 5.01 0.00 0.00 4.94
5754 6243 2.172717 AGCAATTAGATTAGGCCACGGT 59.827 45.455 5.01 0.00 0.00 4.83
5755 6244 2.290641 GCAATTAGATTAGGCCACGGTG 59.709 50.000 5.01 0.00 0.00 4.94
5756 6245 3.541632 CAATTAGATTAGGCCACGGTGT 58.458 45.455 5.01 0.00 0.00 4.16
5757 6246 2.973694 TTAGATTAGGCCACGGTGTC 57.026 50.000 5.01 0.00 0.00 3.67
5758 6247 1.855295 TAGATTAGGCCACGGTGTCA 58.145 50.000 5.01 0.00 0.00 3.58
5759 6248 1.204146 AGATTAGGCCACGGTGTCAT 58.796 50.000 5.01 0.00 0.00 3.06
5760 6249 1.139058 AGATTAGGCCACGGTGTCATC 59.861 52.381 5.01 1.56 0.00 2.92
5761 6250 0.180406 ATTAGGCCACGGTGTCATCC 59.820 55.000 5.01 2.99 0.00 3.51
5762 6251 0.907704 TTAGGCCACGGTGTCATCCT 60.908 55.000 5.01 9.88 0.00 3.24
5763 6252 1.613317 TAGGCCACGGTGTCATCCTG 61.613 60.000 5.01 0.00 0.00 3.86
5764 6253 2.347490 GCCACGGTGTCATCCTGT 59.653 61.111 7.45 0.00 0.00 4.00
5765 6254 1.594833 GCCACGGTGTCATCCTGTA 59.405 57.895 7.45 0.00 0.00 2.74
5766 6255 0.036765 GCCACGGTGTCATCCTGTAA 60.037 55.000 7.45 0.00 0.00 2.41
5767 6256 1.609580 GCCACGGTGTCATCCTGTAAA 60.610 52.381 7.45 0.00 0.00 2.01
5768 6257 2.773487 CCACGGTGTCATCCTGTAAAA 58.227 47.619 7.45 0.00 0.00 1.52
5769 6258 2.482721 CCACGGTGTCATCCTGTAAAAC 59.517 50.000 7.45 0.00 0.00 2.43
5770 6259 3.399330 CACGGTGTCATCCTGTAAAACT 58.601 45.455 0.00 0.00 0.00 2.66
5771 6260 3.813166 CACGGTGTCATCCTGTAAAACTT 59.187 43.478 0.00 0.00 0.00 2.66
5772 6261 4.274950 CACGGTGTCATCCTGTAAAACTTT 59.725 41.667 0.00 0.00 0.00 2.66
5773 6262 4.274950 ACGGTGTCATCCTGTAAAACTTTG 59.725 41.667 0.00 0.00 0.00 2.77
5774 6263 4.274950 CGGTGTCATCCTGTAAAACTTTGT 59.725 41.667 0.00 0.00 0.00 2.83
5775 6264 5.467399 CGGTGTCATCCTGTAAAACTTTGTA 59.533 40.000 0.00 0.00 0.00 2.41
5776 6265 6.565247 CGGTGTCATCCTGTAAAACTTTGTAC 60.565 42.308 0.00 0.00 0.00 2.90
5777 6266 6.360329 GTGTCATCCTGTAAAACTTTGTACG 58.640 40.000 0.00 0.00 0.00 3.67
5778 6267 6.201425 GTGTCATCCTGTAAAACTTTGTACGA 59.799 38.462 0.00 0.00 0.00 3.43
5779 6268 6.932400 TGTCATCCTGTAAAACTTTGTACGAT 59.068 34.615 0.00 0.00 0.00 3.73
5780 6269 7.117236 TGTCATCCTGTAAAACTTTGTACGATC 59.883 37.037 0.00 0.00 0.00 3.69
5781 6270 7.117236 GTCATCCTGTAAAACTTTGTACGATCA 59.883 37.037 0.00 0.00 0.00 2.92
5782 6271 7.822334 TCATCCTGTAAAACTTTGTACGATCAT 59.178 33.333 0.00 0.00 0.00 2.45
5783 6272 7.591006 TCCTGTAAAACTTTGTACGATCATC 57.409 36.000 0.00 0.00 0.00 2.92
5784 6273 6.592607 TCCTGTAAAACTTTGTACGATCATCC 59.407 38.462 0.00 0.00 0.00 3.51
5785 6274 6.594159 CCTGTAAAACTTTGTACGATCATCCT 59.406 38.462 0.00 0.00 0.00 3.24
5786 6275 7.359262 TGTAAAACTTTGTACGATCATCCTG 57.641 36.000 0.00 0.00 0.00 3.86
5787 6276 6.932400 TGTAAAACTTTGTACGATCATCCTGT 59.068 34.615 0.00 0.00 0.00 4.00
5788 6277 8.089597 TGTAAAACTTTGTACGATCATCCTGTA 58.910 33.333 0.00 0.00 0.00 2.74
5789 6278 6.963049 AAACTTTGTACGATCATCCTGTAC 57.037 37.500 0.00 0.00 39.08 2.90
5790 6279 4.669318 ACTTTGTACGATCATCCTGTACG 58.331 43.478 0.00 0.00 40.97 3.67
5791 6280 4.157289 ACTTTGTACGATCATCCTGTACGT 59.843 41.667 0.00 0.00 40.97 3.57
5792 6281 3.685836 TGTACGATCATCCTGTACGTG 57.314 47.619 0.00 0.00 40.97 4.49
5793 6282 3.011818 TGTACGATCATCCTGTACGTGT 58.988 45.455 0.00 0.00 40.97 4.49
5794 6283 4.190772 TGTACGATCATCCTGTACGTGTA 58.809 43.478 0.00 0.00 40.97 2.90
5795 6284 3.965292 ACGATCATCCTGTACGTGTAG 57.035 47.619 0.00 0.00 35.91 2.74
5796 6285 3.276857 ACGATCATCCTGTACGTGTAGT 58.723 45.455 0.00 0.00 35.91 2.73
5797 6286 4.445453 ACGATCATCCTGTACGTGTAGTA 58.555 43.478 0.00 0.00 35.91 1.82
5798 6287 5.061853 ACGATCATCCTGTACGTGTAGTAT 58.938 41.667 0.00 0.00 37.69 2.12
5799 6288 5.530171 ACGATCATCCTGTACGTGTAGTATT 59.470 40.000 0.00 0.00 37.69 1.89
5800 6289 6.707608 ACGATCATCCTGTACGTGTAGTATTA 59.292 38.462 0.00 0.00 37.69 0.98
5801 6290 7.389884 ACGATCATCCTGTACGTGTAGTATTAT 59.610 37.037 0.00 0.00 37.69 1.28
5802 6291 8.235226 CGATCATCCTGTACGTGTAGTATTATT 58.765 37.037 0.00 0.00 37.69 1.40
5803 6292 9.343103 GATCATCCTGTACGTGTAGTATTATTG 57.657 37.037 0.00 0.00 37.69 1.90
5804 6293 7.654568 TCATCCTGTACGTGTAGTATTATTGG 58.345 38.462 0.00 0.00 37.69 3.16
5805 6294 7.503230 TCATCCTGTACGTGTAGTATTATTGGA 59.497 37.037 0.00 0.00 37.69 3.53
5806 6295 7.268199 TCCTGTACGTGTAGTATTATTGGAG 57.732 40.000 0.00 0.00 37.69 3.86
5807 6296 5.919141 CCTGTACGTGTAGTATTATTGGAGC 59.081 44.000 0.00 0.00 37.69 4.70
5808 6297 6.238953 CCTGTACGTGTAGTATTATTGGAGCT 60.239 42.308 0.00 0.00 37.69 4.09
5809 6298 7.104043 TGTACGTGTAGTATTATTGGAGCTT 57.896 36.000 0.00 0.00 37.69 3.74
5810 6299 6.976349 TGTACGTGTAGTATTATTGGAGCTTG 59.024 38.462 0.00 0.00 37.69 4.01
5811 6300 6.216801 ACGTGTAGTATTATTGGAGCTTGA 57.783 37.500 0.00 0.00 0.00 3.02
5812 6301 6.636705 ACGTGTAGTATTATTGGAGCTTGAA 58.363 36.000 0.00 0.00 0.00 2.69
5821 6311 9.952188 GTATTATTGGAGCTTGAAAATACCTTC 57.048 33.333 0.00 0.00 0.00 3.46
5857 6347 0.329596 GGTCTCCTGCCATTTGTCCT 59.670 55.000 0.00 0.00 0.00 3.85
5858 6348 1.559682 GGTCTCCTGCCATTTGTCCTA 59.440 52.381 0.00 0.00 0.00 2.94
5859 6349 2.420687 GGTCTCCTGCCATTTGTCCTAG 60.421 54.545 0.00 0.00 0.00 3.02
5876 6366 7.676683 TGTCCTAGTAGAGCTTTTGGATTAT 57.323 36.000 0.00 0.00 0.00 1.28
5880 6370 7.569111 TCCTAGTAGAGCTTTTGGATTATCCTT 59.431 37.037 12.91 0.00 37.46 3.36
5900 6390 8.947055 ATCCTTTGGTAATTAATGAAATGCAC 57.053 30.769 0.00 0.00 0.00 4.57
5952 6442 5.243060 AGTTACCTCTTGTTTATGCCCAAAC 59.757 40.000 3.87 3.87 38.60 2.93
5955 6445 3.754323 CCTCTTGTTTATGCCCAAACGTA 59.246 43.478 0.00 0.00 40.56 3.57
5956 6446 4.216687 CCTCTTGTTTATGCCCAAACGTAA 59.783 41.667 0.00 0.00 40.56 3.18
5957 6447 5.278561 CCTCTTGTTTATGCCCAAACGTAAA 60.279 40.000 0.00 0.00 40.56 2.01
5961 6483 5.952033 TGTTTATGCCCAAACGTAAATACC 58.048 37.500 0.00 0.00 40.56 2.73
5964 6486 1.805345 TGCCCAAACGTAAATACCGTG 59.195 47.619 0.00 0.00 38.77 4.94
5984 6506 1.468736 GCTGCAGCTCCTTGTTTATGC 60.469 52.381 31.33 0.00 38.21 3.14
6060 6628 6.068670 TCTGTAGAATATGACCATCTTCCGA 58.931 40.000 5.00 0.00 0.00 4.55
6103 6673 7.602753 TCGATGATATGATATGAACGAAACCT 58.397 34.615 2.21 0.00 0.00 3.50
6108 6678 3.937814 TGATATGAACGAAACCTGCTGT 58.062 40.909 0.00 0.00 0.00 4.40
6109 6679 5.079689 TGATATGAACGAAACCTGCTGTA 57.920 39.130 0.00 0.00 0.00 2.74
6141 6712 8.500753 AGTCTTTTGATGTGCGGTTATATTAA 57.499 30.769 0.00 0.00 0.00 1.40
6174 6745 1.423721 GCCGTCGTTTCCGTTATCCC 61.424 60.000 0.00 0.00 35.01 3.85
6181 6752 4.037923 GTCGTTTCCGTTATCCCCTGTATA 59.962 45.833 0.00 0.00 35.01 1.47
6270 6841 2.348660 CCCCGTCACGCTAACAAATTA 58.651 47.619 0.00 0.00 0.00 1.40
6325 6896 0.464452 ACCCTTTCGATCACGGATCC 59.536 55.000 0.00 0.00 35.83 3.36
6337 6908 0.606604 ACGGATCCACGCACTAAACT 59.393 50.000 13.41 0.00 37.37 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.892425 GGCCTCTCCGCATTGACG 60.892 66.667 0.00 0.00 0.00 4.35
27 28 4.429213 GCTTTAGAGCGGCCTCTC 57.571 61.111 15.22 15.22 45.21 3.20
63 64 0.737715 CCCTTTCTCGTCTGAAGCGG 60.738 60.000 0.00 0.00 0.00 5.52
64 65 1.355066 GCCCTTTCTCGTCTGAAGCG 61.355 60.000 0.00 0.00 0.00 4.68
65 66 1.355066 CGCCCTTTCTCGTCTGAAGC 61.355 60.000 0.00 0.00 0.00 3.86
70 71 3.681835 ACGCGCCCTTTCTCGTCT 61.682 61.111 5.73 0.00 0.00 4.18
88 89 2.585153 GAAACCCCTCTCCCTCGC 59.415 66.667 0.00 0.00 0.00 5.03
98 99 1.675720 CCATGGCCAATCGAAACCCC 61.676 60.000 10.96 0.00 0.00 4.95
109 110 0.105760 AACTCCAACAACCATGGCCA 60.106 50.000 13.04 8.56 37.88 5.36
128 129 0.324614 CCAGACCACTGCCACACATA 59.675 55.000 0.00 0.00 42.25 2.29
131 132 2.281761 CCCAGACCACTGCCACAC 60.282 66.667 0.00 0.00 42.25 3.82
132 133 4.269523 GCCCAGACCACTGCCACA 62.270 66.667 0.00 0.00 42.25 4.17
163 164 1.298859 CGAAAACAAGCCGAGGGAGG 61.299 60.000 0.00 0.00 0.00 4.30
171 172 2.350102 CCTCGTAAACCGAAAACAAGCC 60.350 50.000 0.00 0.00 46.75 4.35
173 174 4.799419 TTCCTCGTAAACCGAAAACAAG 57.201 40.909 0.00 0.00 46.75 3.16
192 193 6.715464 TCTTGACTGTTCGAATGTCTTTTTC 58.285 36.000 24.42 3.52 0.00 2.29
197 198 4.058817 GGTTCTTGACTGTTCGAATGTCT 58.941 43.478 24.42 2.57 0.00 3.41
203 204 1.537348 CGTGGGTTCTTGACTGTTCGA 60.537 52.381 0.00 0.00 0.00 3.71
211 212 2.875933 GTCATTCAACGTGGGTTCTTGA 59.124 45.455 0.00 0.00 32.98 3.02
215 216 3.701532 TTTGTCATTCAACGTGGGTTC 57.298 42.857 0.00 0.00 35.61 3.62
216 217 3.193691 TGTTTTGTCATTCAACGTGGGTT 59.806 39.130 0.00 0.00 35.61 4.11
217 218 2.755655 TGTTTTGTCATTCAACGTGGGT 59.244 40.909 0.00 0.00 35.61 4.51
218 219 3.112580 GTGTTTTGTCATTCAACGTGGG 58.887 45.455 0.00 0.00 35.61 4.61
219 220 2.781101 CGTGTTTTGTCATTCAACGTGG 59.219 45.455 0.00 0.00 35.61 4.94
220 221 3.421741 ACGTGTTTTGTCATTCAACGTG 58.578 40.909 0.00 0.00 38.03 4.49
250 262 2.915659 AAGACCGTCCAGACCGCA 60.916 61.111 0.00 0.00 0.00 5.69
258 270 1.187087 AGTCATCTCCAAGACCGTCC 58.813 55.000 0.00 0.00 35.38 4.79
262 274 4.394439 GGAGTAAGTCATCTCCAAGACC 57.606 50.000 6.37 0.00 46.59 3.85
269 284 1.002251 CGGCGAGGAGTAAGTCATCTC 60.002 57.143 0.00 0.00 33.56 2.75
275 290 2.036890 ACCCGGCGAGGAGTAAGT 59.963 61.111 19.10 0.00 45.00 2.24
289 304 3.739589 TATTTCTTCGGCCCAGCACCC 62.740 57.143 0.00 0.00 0.00 4.61
290 305 0.393808 TATTTCTTCGGCCCAGCACC 60.394 55.000 0.00 0.00 0.00 5.01
291 306 1.459450 TTATTTCTTCGGCCCAGCAC 58.541 50.000 0.00 0.00 0.00 4.40
292 307 2.208132 TTTATTTCTTCGGCCCAGCA 57.792 45.000 0.00 0.00 0.00 4.41
293 308 3.381590 AGATTTTATTTCTTCGGCCCAGC 59.618 43.478 0.00 0.00 0.00 4.85
294 309 4.036852 GGAGATTTTATTTCTTCGGCCCAG 59.963 45.833 0.00 0.00 0.00 4.45
295 310 3.951680 GGAGATTTTATTTCTTCGGCCCA 59.048 43.478 0.00 0.00 0.00 5.36
296 311 3.951680 TGGAGATTTTATTTCTTCGGCCC 59.048 43.478 0.00 0.00 0.00 5.80
297 312 4.202020 GGTGGAGATTTTATTTCTTCGGCC 60.202 45.833 0.00 0.00 0.00 6.13
298 313 4.495844 CGGTGGAGATTTTATTTCTTCGGC 60.496 45.833 0.00 0.00 0.00 5.54
299 314 4.634443 ACGGTGGAGATTTTATTTCTTCGG 59.366 41.667 0.00 0.00 0.00 4.30
300 315 5.350365 TGACGGTGGAGATTTTATTTCTTCG 59.650 40.000 0.00 0.00 0.00 3.79
301 316 6.737254 TGACGGTGGAGATTTTATTTCTTC 57.263 37.500 0.00 0.00 0.00 2.87
302 317 7.519032 TTTGACGGTGGAGATTTTATTTCTT 57.481 32.000 0.00 0.00 0.00 2.52
303 318 7.447238 TCTTTTGACGGTGGAGATTTTATTTCT 59.553 33.333 0.00 0.00 0.00 2.52
304 319 7.590279 TCTTTTGACGGTGGAGATTTTATTTC 58.410 34.615 0.00 0.00 0.00 2.17
305 320 7.519032 TCTTTTGACGGTGGAGATTTTATTT 57.481 32.000 0.00 0.00 0.00 1.40
306 321 7.230712 ACTTCTTTTGACGGTGGAGATTTTATT 59.769 33.333 0.00 0.00 0.00 1.40
393 408 1.174712 ATTGGCTTGCAGTTGCTCGT 61.175 50.000 5.62 0.00 42.66 4.18
394 409 0.804364 TATTGGCTTGCAGTTGCTCG 59.196 50.000 5.62 0.00 42.66 5.03
401 416 1.202110 CGCTGACTTATTGGCTTGCAG 60.202 52.381 0.00 0.00 0.00 4.41
499 522 0.039764 TGGAGGGAGCGAAAGAGAGA 59.960 55.000 0.00 0.00 0.00 3.10
501 524 1.482593 GAATGGAGGGAGCGAAAGAGA 59.517 52.381 0.00 0.00 0.00 3.10
530 559 0.992072 CGAAAGCGAGCGAGATGAAA 59.008 50.000 0.00 0.00 40.82 2.69
531 560 2.653742 CGAAAGCGAGCGAGATGAA 58.346 52.632 0.00 0.00 40.82 2.57
532 561 4.384485 CGAAAGCGAGCGAGATGA 57.616 55.556 0.00 0.00 40.82 2.92
610 842 2.034066 CTGCAAAGGCGAGGGGAA 59.966 61.111 0.00 0.00 45.35 3.97
655 895 1.453745 CTGCTGGTGTTGGTGTGGT 60.454 57.895 0.00 0.00 0.00 4.16
656 896 2.848858 GCTGCTGGTGTTGGTGTGG 61.849 63.158 0.00 0.00 0.00 4.17
657 897 2.067091 CTGCTGCTGGTGTTGGTGTG 62.067 60.000 0.00 0.00 0.00 3.82
658 898 1.825191 CTGCTGCTGGTGTTGGTGT 60.825 57.895 0.00 0.00 0.00 4.16
659 899 3.036577 CTGCTGCTGGTGTTGGTG 58.963 61.111 0.00 0.00 0.00 4.17
660 900 2.908940 GCTGCTGCTGGTGTTGGT 60.909 61.111 8.53 0.00 36.03 3.67
661 901 2.908428 TGCTGCTGCTGGTGTTGG 60.908 61.111 17.00 0.00 40.48 3.77
662 902 2.643272 CTGCTGCTGCTGGTGTTG 59.357 61.111 17.00 0.00 40.48 3.33
663 903 3.292936 GCTGCTGCTGCTGGTGTT 61.293 61.111 22.10 0.00 40.48 3.32
681 921 4.074526 GGTGCTCGGCTCAGCTCA 62.075 66.667 0.00 0.00 40.39 4.26
691 931 1.209275 GATTCATCGACGGGTGCTCG 61.209 60.000 0.00 0.00 0.00 5.03
705 945 5.468540 TCTCTTTTCTTGTCCTCGATTCA 57.531 39.130 0.00 0.00 0.00 2.57
741 981 2.223595 CGCGCCTTTTATCTCTCTCTCA 60.224 50.000 0.00 0.00 0.00 3.27
935 1204 1.452145 GCGAGGTAGAGCAGGAGGAG 61.452 65.000 0.00 0.00 0.00 3.69
936 1205 1.454111 GCGAGGTAGAGCAGGAGGA 60.454 63.158 0.00 0.00 0.00 3.71
937 1206 1.454847 AGCGAGGTAGAGCAGGAGG 60.455 63.158 0.00 0.00 35.48 4.30
2124 2406 0.179029 AAAGGTGTGCTTAGTGCGGT 60.179 50.000 0.00 0.00 46.63 5.68
2206 2488 1.282157 AGTTTCCAGCATCACCTACCC 59.718 52.381 0.00 0.00 0.00 3.69
2310 2592 3.997064 CTGGAAGAGGACGCTGCGG 62.997 68.421 26.95 8.45 34.07 5.69
2344 2626 4.951715 ACGTAGACTCCCATGTTATGTACA 59.048 41.667 0.00 0.00 41.97 2.90
2345 2627 5.511234 ACGTAGACTCCCATGTTATGTAC 57.489 43.478 0.00 0.00 0.00 2.90
2346 2628 5.237127 CGTACGTAGACTCCCATGTTATGTA 59.763 44.000 7.22 0.00 0.00 2.29
2347 2629 4.036027 CGTACGTAGACTCCCATGTTATGT 59.964 45.833 7.22 0.00 0.00 2.29
2348 2630 4.274214 TCGTACGTAGACTCCCATGTTATG 59.726 45.833 16.05 0.00 0.00 1.90
2360 2642 5.154215 AGCTTTCTACATCGTACGTAGAC 57.846 43.478 16.05 4.16 43.80 2.59
2429 2712 9.334693 CATTAATAAAGAAGTCAGACAAGCAAC 57.665 33.333 2.66 0.00 0.00 4.17
2529 2816 5.525012 GGAAAGATTTTCTTTGCTGTTTGCT 59.475 36.000 12.50 0.00 46.83 3.91
2569 2865 6.780031 ACTTGATTAGAGGAGATAAGCAGCTA 59.220 38.462 0.00 0.00 30.91 3.32
2583 2879 6.680874 AGTGAGTACGGTACTTGATTAGAG 57.319 41.667 20.91 0.00 39.59 2.43
2584 2880 7.066284 GGTAAGTGAGTACGGTACTTGATTAGA 59.934 40.741 20.91 2.94 39.59 2.10
2585 2881 7.148188 TGGTAAGTGAGTACGGTACTTGATTAG 60.148 40.741 20.91 0.00 39.59 1.73
2594 2890 4.343231 TGGATTGGTAAGTGAGTACGGTA 58.657 43.478 0.00 0.00 0.00 4.02
2600 2896 2.616510 GCAGCTGGATTGGTAAGTGAGT 60.617 50.000 17.12 0.00 0.00 3.41
2601 2897 2.012673 GCAGCTGGATTGGTAAGTGAG 58.987 52.381 17.12 0.00 0.00 3.51
2602 2898 1.350684 TGCAGCTGGATTGGTAAGTGA 59.649 47.619 17.12 0.00 0.00 3.41
2603 2899 1.825090 TGCAGCTGGATTGGTAAGTG 58.175 50.000 17.12 0.00 0.00 3.16
2610 2906 3.698040 AGAGGTTAATTGCAGCTGGATTG 59.302 43.478 17.12 0.00 0.00 2.67
2620 2916 7.930865 AGTAGAATGAGATGAGAGGTTAATTGC 59.069 37.037 0.00 0.00 0.00 3.56
2634 2930 5.658634 TGCACACCTAGAAGTAGAATGAGAT 59.341 40.000 0.00 0.00 0.00 2.75
2636 2932 5.330455 TGCACACCTAGAAGTAGAATGAG 57.670 43.478 0.00 0.00 0.00 2.90
2639 2935 5.105146 CCTCTTGCACACCTAGAAGTAGAAT 60.105 44.000 0.00 0.00 0.00 2.40
2640 2936 4.220821 CCTCTTGCACACCTAGAAGTAGAA 59.779 45.833 0.00 0.00 0.00 2.10
2641 2937 3.764434 CCTCTTGCACACCTAGAAGTAGA 59.236 47.826 0.00 0.00 0.00 2.59
2642 2938 3.511934 ACCTCTTGCACACCTAGAAGTAG 59.488 47.826 0.00 0.00 0.00 2.57
2643 2939 3.507411 ACCTCTTGCACACCTAGAAGTA 58.493 45.455 0.00 0.00 0.00 2.24
2644 2940 2.330216 ACCTCTTGCACACCTAGAAGT 58.670 47.619 0.00 0.00 0.00 3.01
2645 2941 3.368531 GGTACCTCTTGCACACCTAGAAG 60.369 52.174 4.06 0.00 0.00 2.85
2646 2942 2.565834 GGTACCTCTTGCACACCTAGAA 59.434 50.000 4.06 0.00 0.00 2.10
2647 2943 2.176889 GGTACCTCTTGCACACCTAGA 58.823 52.381 4.06 0.00 0.00 2.43
2648 2944 1.135083 CGGTACCTCTTGCACACCTAG 60.135 57.143 10.90 0.00 0.00 3.02
2702 2998 3.173240 GCCACGCTCTCGAACGAC 61.173 66.667 8.89 0.00 39.41 4.34
2834 3130 0.322816 TGCTCATGCCTTCCTTGACC 60.323 55.000 0.00 0.00 38.71 4.02
3183 3484 1.648467 GACACCGAGGATTGCTTGCC 61.648 60.000 0.00 0.00 0.00 4.52
3226 3527 1.134367 CATCACTCATGCTTGGCCTTG 59.866 52.381 3.32 0.00 0.00 3.61
3227 3528 1.471119 CATCACTCATGCTTGGCCTT 58.529 50.000 3.32 0.00 0.00 4.35
3228 3529 0.395311 CCATCACTCATGCTTGGCCT 60.395 55.000 3.32 0.00 0.00 5.19
3229 3530 0.394762 TCCATCACTCATGCTTGGCC 60.395 55.000 0.00 0.00 31.97 5.36
3230 3531 1.022735 CTCCATCACTCATGCTTGGC 58.977 55.000 0.00 0.00 31.97 4.52
3231 3532 2.014857 CACTCCATCACTCATGCTTGG 58.985 52.381 0.00 0.00 32.74 3.61
3272 3573 0.978907 ATTTGGAAGCCAAGCCAAGG 59.021 50.000 0.00 0.00 44.84 3.61
3315 3621 1.136057 GTCTTAAAAAGCTGACGGCCG 60.136 52.381 26.86 26.86 43.05 6.13
3316 3622 1.877443 TGTCTTAAAAAGCTGACGGCC 59.123 47.619 1.62 0.00 43.05 6.13
3317 3623 3.831715 ATGTCTTAAAAAGCTGACGGC 57.168 42.857 0.00 0.00 42.19 5.68
3404 3711 8.621532 AGTTAGAAAGTCATGCAAATGTCTAA 57.378 30.769 0.00 0.00 0.00 2.10
3406 3713 8.798859 ATAGTTAGAAAGTCATGCAAATGTCT 57.201 30.769 0.00 0.00 0.00 3.41
3407 3714 8.668353 TGATAGTTAGAAAGTCATGCAAATGTC 58.332 33.333 0.00 0.00 0.00 3.06
3408 3715 8.565896 TGATAGTTAGAAAGTCATGCAAATGT 57.434 30.769 0.00 0.00 0.00 2.71
3409 3716 9.661187 GATGATAGTTAGAAAGTCATGCAAATG 57.339 33.333 0.00 0.00 30.24 2.32
3410 3717 9.399797 TGATGATAGTTAGAAAGTCATGCAAAT 57.600 29.630 0.00 0.00 30.24 2.32
3435 3748 0.107703 TCCATAAAGCCGCTCACCTG 60.108 55.000 0.00 0.00 0.00 4.00
3809 4228 3.938334 CAGCCTTTCTTTCTAGAGGCTTC 59.062 47.826 16.18 0.00 45.12 3.86
3812 4231 3.618690 TCAGCCTTTCTTTCTAGAGGC 57.381 47.619 9.81 9.81 40.39 4.70
3829 4249 9.865321 AAAAGGACATGAATTGACAATTATCAG 57.135 29.630 13.34 6.92 0.00 2.90
3893 4314 6.602278 AGTAGGCCTTTTTGTAAAGAAGAGT 58.398 36.000 12.58 0.00 42.78 3.24
3980 4401 8.579850 TCAGCTTAAACATTCATAACTCCAAT 57.420 30.769 0.00 0.00 0.00 3.16
4083 4511 4.010349 GTGTGAATAGAAAAGGGGTCCTG 58.990 47.826 0.00 0.00 32.13 3.86
4128 4559 4.763073 TCTAAGCACTGATTGATGTGAGG 58.237 43.478 0.00 0.00 36.38 3.86
4129 4560 6.922247 AATCTAAGCACTGATTGATGTGAG 57.078 37.500 0.00 0.00 36.38 3.51
4130 4561 6.880529 TCAAATCTAAGCACTGATTGATGTGA 59.119 34.615 7.61 7.61 36.38 3.58
4154 4588 4.585879 TGCACCCCTTTAAGAGTATGTTC 58.414 43.478 0.00 0.00 0.00 3.18
4158 4592 3.785887 TCCATGCACCCCTTTAAGAGTAT 59.214 43.478 0.00 0.00 0.00 2.12
4169 4603 2.283143 TAGCACCATCCATGCACCCC 62.283 60.000 0.00 0.00 45.92 4.95
4170 4604 0.820891 CTAGCACCATCCATGCACCC 60.821 60.000 0.00 0.00 45.92 4.61
4171 4605 0.181114 TCTAGCACCATCCATGCACC 59.819 55.000 0.00 0.00 45.92 5.01
4174 4608 1.139654 TCAGTCTAGCACCATCCATGC 59.860 52.381 0.00 0.00 43.74 4.06
4175 4609 3.766068 ATCAGTCTAGCACCATCCATG 57.234 47.619 0.00 0.00 0.00 3.66
4176 4610 5.894298 TTTATCAGTCTAGCACCATCCAT 57.106 39.130 0.00 0.00 0.00 3.41
4177 4611 5.674525 CTTTTATCAGTCTAGCACCATCCA 58.325 41.667 0.00 0.00 0.00 3.41
4178 4612 4.513318 GCTTTTATCAGTCTAGCACCATCC 59.487 45.833 0.00 0.00 0.00 3.51
4179 4613 4.513318 GGCTTTTATCAGTCTAGCACCATC 59.487 45.833 0.00 0.00 33.60 3.51
4180 4614 4.164988 AGGCTTTTATCAGTCTAGCACCAT 59.835 41.667 0.00 0.00 33.60 3.55
4181 4615 3.519510 AGGCTTTTATCAGTCTAGCACCA 59.480 43.478 0.00 0.00 33.60 4.17
4182 4616 3.873952 CAGGCTTTTATCAGTCTAGCACC 59.126 47.826 0.00 0.00 33.60 5.01
4183 4617 4.759782 TCAGGCTTTTATCAGTCTAGCAC 58.240 43.478 0.00 0.00 33.60 4.40
4184 4618 5.420725 TTCAGGCTTTTATCAGTCTAGCA 57.579 39.130 0.00 0.00 33.60 3.49
4185 4619 6.051717 TGATTCAGGCTTTTATCAGTCTAGC 58.948 40.000 0.00 0.00 0.00 3.42
4186 4620 8.498054 TTTGATTCAGGCTTTTATCAGTCTAG 57.502 34.615 0.00 0.00 0.00 2.43
4188 4622 7.951347 ATTTGATTCAGGCTTTTATCAGTCT 57.049 32.000 0.00 0.00 0.00 3.24
4197 4631 9.822185 GGAACAATTATATTTGATTCAGGCTTT 57.178 29.630 13.01 0.00 0.00 3.51
4198 4632 9.205513 AGGAACAATTATATTTGATTCAGGCTT 57.794 29.630 13.01 0.00 0.00 4.35
4199 4633 8.773033 AGGAACAATTATATTTGATTCAGGCT 57.227 30.769 13.01 0.00 0.00 4.58
4200 4634 8.632679 TGAGGAACAATTATATTTGATTCAGGC 58.367 33.333 13.01 7.46 0.00 4.85
4201 4635 9.956720 GTGAGGAACAATTATATTTGATTCAGG 57.043 33.333 13.01 0.00 0.00 3.86
4211 4645 9.857656 ACTGATTGATGTGAGGAACAATTATAT 57.142 29.630 0.00 0.00 43.61 0.86
4212 4646 9.112725 CACTGATTGATGTGAGGAACAATTATA 57.887 33.333 0.00 0.00 43.61 0.98
4213 4647 7.415989 GCACTGATTGATGTGAGGAACAATTAT 60.416 37.037 0.00 0.00 43.61 1.28
4214 4648 6.127925 GCACTGATTGATGTGAGGAACAATTA 60.128 38.462 0.00 0.00 43.61 1.40
4215 4649 5.336213 GCACTGATTGATGTGAGGAACAATT 60.336 40.000 0.00 0.00 43.61 2.32
4216 4650 4.157289 GCACTGATTGATGTGAGGAACAAT 59.843 41.667 0.00 0.00 43.61 2.71
4217 4651 3.503363 GCACTGATTGATGTGAGGAACAA 59.497 43.478 0.00 0.00 43.61 2.83
4218 4652 3.076621 GCACTGATTGATGTGAGGAACA 58.923 45.455 0.00 0.00 44.79 3.18
4219 4653 3.341823 AGCACTGATTGATGTGAGGAAC 58.658 45.455 0.00 0.00 36.38 3.62
4220 4654 3.708403 AGCACTGATTGATGTGAGGAA 57.292 42.857 0.00 0.00 36.38 3.36
4221 4655 3.708403 AAGCACTGATTGATGTGAGGA 57.292 42.857 0.00 0.00 36.38 3.71
4222 4656 4.763073 TCTAAGCACTGATTGATGTGAGG 58.237 43.478 0.00 0.00 36.38 3.86
4223 4657 6.922247 AATCTAAGCACTGATTGATGTGAG 57.078 37.500 0.00 0.00 36.38 3.51
4224 4658 6.880529 TCAAATCTAAGCACTGATTGATGTGA 59.119 34.615 7.61 7.61 36.38 3.58
4225 4659 7.080353 TCAAATCTAAGCACTGATTGATGTG 57.920 36.000 0.00 0.00 33.72 3.21
4226 4660 7.175467 TGTTCAAATCTAAGCACTGATTGATGT 59.825 33.333 0.00 0.00 33.72 3.06
4227 4661 7.532571 TGTTCAAATCTAAGCACTGATTGATG 58.467 34.615 0.00 0.00 33.72 3.07
4228 4662 7.692460 TGTTCAAATCTAAGCACTGATTGAT 57.308 32.000 0.00 0.00 33.72 2.57
4229 4663 7.692460 ATGTTCAAATCTAAGCACTGATTGA 57.308 32.000 0.00 0.00 33.72 2.57
4230 4664 8.671921 AGTATGTTCAAATCTAAGCACTGATTG 58.328 33.333 0.00 0.00 33.72 2.67
4231 4665 8.798859 AGTATGTTCAAATCTAAGCACTGATT 57.201 30.769 0.00 0.00 34.75 2.57
4232 4666 8.263640 AGAGTATGTTCAAATCTAAGCACTGAT 58.736 33.333 0.00 0.00 0.00 2.90
4233 4667 7.615403 AGAGTATGTTCAAATCTAAGCACTGA 58.385 34.615 0.00 0.00 0.00 3.41
4234 4668 7.840342 AGAGTATGTTCAAATCTAAGCACTG 57.160 36.000 0.00 0.00 0.00 3.66
4235 4669 9.944376 TTAAGAGTATGTTCAAATCTAAGCACT 57.056 29.630 0.00 0.00 0.00 4.40
4240 4674 9.681062 CCCCTTTAAGAGTATGTTCAAATCTAA 57.319 33.333 0.00 0.00 0.00 2.10
4241 4675 8.832735 ACCCCTTTAAGAGTATGTTCAAATCTA 58.167 33.333 0.00 0.00 0.00 1.98
4242 4676 7.611855 CACCCCTTTAAGAGTATGTTCAAATCT 59.388 37.037 0.00 0.00 0.00 2.40
4243 4677 7.628580 GCACCCCTTTAAGAGTATGTTCAAATC 60.629 40.741 0.00 0.00 0.00 2.17
4244 4678 6.152831 GCACCCCTTTAAGAGTATGTTCAAAT 59.847 38.462 0.00 0.00 0.00 2.32
4245 4679 5.475564 GCACCCCTTTAAGAGTATGTTCAAA 59.524 40.000 0.00 0.00 0.00 2.69
4246 4680 5.007682 GCACCCCTTTAAGAGTATGTTCAA 58.992 41.667 0.00 0.00 0.00 2.69
4247 4681 4.042311 TGCACCCCTTTAAGAGTATGTTCA 59.958 41.667 0.00 0.00 0.00 3.18
4248 4682 4.585879 TGCACCCCTTTAAGAGTATGTTC 58.414 43.478 0.00 0.00 0.00 3.18
4249 4683 4.650972 TGCACCCCTTTAAGAGTATGTT 57.349 40.909 0.00 0.00 0.00 2.71
4250 4684 4.526970 CATGCACCCCTTTAAGAGTATGT 58.473 43.478 0.00 0.00 0.00 2.29
4251 4685 3.885297 CCATGCACCCCTTTAAGAGTATG 59.115 47.826 0.00 0.00 0.00 2.39
4252 4686 3.785887 TCCATGCACCCCTTTAAGAGTAT 59.214 43.478 0.00 0.00 0.00 2.12
4265 4699 0.181114 TCTAGCACCATCCATGCACC 59.819 55.000 0.00 0.00 45.92 5.01
4302 4736 4.408821 GTCCGGGCAGCATCCACA 62.409 66.667 0.00 0.00 0.00 4.17
4303 4737 2.252072 TAAGTCCGGGCAGCATCCAC 62.252 60.000 9.71 0.00 0.00 4.02
4304 4738 1.344953 ATAAGTCCGGGCAGCATCCA 61.345 55.000 9.71 0.00 0.00 3.41
4305 4739 0.886490 CATAAGTCCGGGCAGCATCC 60.886 60.000 9.71 0.00 0.00 3.51
4314 4774 3.139077 GGCTTAACATCCATAAGTCCGG 58.861 50.000 0.00 0.00 33.77 5.14
4370 4830 3.054878 GAGTGCAAAACAAGCCAGATTG 58.945 45.455 0.00 0.00 36.22 2.67
4418 4878 4.748023 CGTTCTGCACGCAACTATTATAC 58.252 43.478 0.00 0.00 43.37 1.47
4489 4949 2.079158 TGCAGCAGTACTCTTGATTGC 58.921 47.619 7.21 0.69 35.09 3.56
4524 4988 3.056821 GGATACCTGCAAAGTTTCAACCC 60.057 47.826 8.55 0.00 0.00 4.11
4583 5047 1.992557 ACCTGATTCCTTGTTAGGCCA 59.007 47.619 5.01 0.00 41.69 5.36
4650 5114 0.814010 ACACGTCAACCAAGCTCCAC 60.814 55.000 0.00 0.00 0.00 4.02
4666 5130 2.756207 ACCGCCATTATTAACCCAACAC 59.244 45.455 0.00 0.00 0.00 3.32
4835 5299 4.284860 TGCTGCTGCGACGAGTGT 62.285 61.111 11.21 0.00 43.34 3.55
5327 5809 0.178068 ACCCGACGAAATCATGGAGG 59.822 55.000 0.00 0.00 0.00 4.30
5410 5898 2.552743 CCTAGCATACTAGCAGTGCGTA 59.447 50.000 10.00 7.40 44.00 4.42
5418 5906 8.927675 ACTATATACCATCCTAGCATACTAGC 57.072 38.462 0.00 0.00 44.00 3.42
5546 6034 7.206789 TGAATTTTGGATCTAGTACATGGGA 57.793 36.000 0.00 0.00 0.00 4.37
5547 6035 7.880160 TTGAATTTTGGATCTAGTACATGGG 57.120 36.000 0.00 0.00 0.00 4.00
5587 6076 1.679139 CCACAAGGTGTTTGAGAGCA 58.321 50.000 0.00 0.00 39.21 4.26
5588 6077 0.954452 CCCACAAGGTGTTTGAGAGC 59.046 55.000 0.00 0.00 39.21 4.09
5589 6078 0.954452 GCCCACAAGGTGTTTGAGAG 59.046 55.000 0.00 0.00 39.21 3.20
5590 6079 0.550914 AGCCCACAAGGTGTTTGAGA 59.449 50.000 0.00 0.00 39.21 3.27
5591 6080 1.880027 GTAGCCCACAAGGTGTTTGAG 59.120 52.381 0.00 0.00 39.21 3.02
5624 6113 1.478137 CCGTACGTCTAGCATTGCTC 58.522 55.000 15.81 0.00 40.44 4.26
5625 6114 0.102481 CCCGTACGTCTAGCATTGCT 59.898 55.000 16.63 16.63 43.41 3.91
5626 6115 1.488261 GCCCGTACGTCTAGCATTGC 61.488 60.000 15.21 0.00 0.00 3.56
5627 6116 1.206745 CGCCCGTACGTCTAGCATTG 61.207 60.000 15.21 0.00 0.00 2.82
5628 6117 1.065273 CGCCCGTACGTCTAGCATT 59.935 57.895 15.21 0.00 0.00 3.56
5629 6118 2.117156 ACGCCCGTACGTCTAGCAT 61.117 57.895 15.21 0.00 44.43 3.79
5630 6119 2.747460 ACGCCCGTACGTCTAGCA 60.747 61.111 15.21 0.00 44.43 3.49
5638 6127 2.506881 CCCGTACAACGCCCGTAC 60.507 66.667 0.00 0.00 40.91 3.67
5639 6128 3.757828 CCCCGTACAACGCCCGTA 61.758 66.667 0.00 0.00 40.91 4.02
5642 6131 2.825075 AAATCCCCCGTACAACGCCC 62.825 60.000 0.00 0.00 40.91 6.13
5643 6132 0.107752 TAAATCCCCCGTACAACGCC 60.108 55.000 0.00 0.00 40.91 5.68
5644 6133 1.009078 GTAAATCCCCCGTACAACGC 58.991 55.000 0.00 0.00 40.91 4.84
5645 6134 2.273557 CTGTAAATCCCCCGTACAACG 58.726 52.381 0.00 0.00 42.11 4.10
5646 6135 2.635714 CCTGTAAATCCCCCGTACAAC 58.364 52.381 0.00 0.00 0.00 3.32
5647 6136 1.065272 GCCTGTAAATCCCCCGTACAA 60.065 52.381 0.00 0.00 0.00 2.41
5648 6137 0.542805 GCCTGTAAATCCCCCGTACA 59.457 55.000 0.00 0.00 0.00 2.90
5649 6138 0.835276 AGCCTGTAAATCCCCCGTAC 59.165 55.000 0.00 0.00 0.00 3.67
5650 6139 1.125633 GAGCCTGTAAATCCCCCGTA 58.874 55.000 0.00 0.00 0.00 4.02
5651 6140 1.912971 GAGCCTGTAAATCCCCCGT 59.087 57.895 0.00 0.00 0.00 5.28
5652 6141 1.227556 CGAGCCTGTAAATCCCCCG 60.228 63.158 0.00 0.00 0.00 5.73
5653 6142 0.255033 AACGAGCCTGTAAATCCCCC 59.745 55.000 0.00 0.00 0.00 5.40
5654 6143 1.065709 TCAACGAGCCTGTAAATCCCC 60.066 52.381 0.00 0.00 0.00 4.81
5655 6144 2.007608 GTCAACGAGCCTGTAAATCCC 58.992 52.381 0.00 0.00 0.00 3.85
5656 6145 2.673368 CAGTCAACGAGCCTGTAAATCC 59.327 50.000 0.00 0.00 0.00 3.01
5657 6146 3.123621 CACAGTCAACGAGCCTGTAAATC 59.876 47.826 0.00 0.00 37.34 2.17
5658 6147 3.067106 CACAGTCAACGAGCCTGTAAAT 58.933 45.455 0.00 0.00 37.34 1.40
5659 6148 2.101750 TCACAGTCAACGAGCCTGTAAA 59.898 45.455 0.00 0.00 37.34 2.01
5660 6149 1.684450 TCACAGTCAACGAGCCTGTAA 59.316 47.619 0.00 0.00 37.34 2.41
5661 6150 1.324383 TCACAGTCAACGAGCCTGTA 58.676 50.000 0.00 0.00 37.34 2.74
5662 6151 0.681733 ATCACAGTCAACGAGCCTGT 59.318 50.000 0.00 0.00 39.93 4.00
5663 6152 1.462283 CAATCACAGTCAACGAGCCTG 59.538 52.381 0.00 0.00 0.00 4.85
5664 6153 1.609061 CCAATCACAGTCAACGAGCCT 60.609 52.381 0.00 0.00 0.00 4.58
5665 6154 0.798776 CCAATCACAGTCAACGAGCC 59.201 55.000 0.00 0.00 0.00 4.70
5666 6155 1.512926 ACCAATCACAGTCAACGAGC 58.487 50.000 0.00 0.00 0.00 5.03
5667 6156 2.224079 CCAACCAATCACAGTCAACGAG 59.776 50.000 0.00 0.00 0.00 4.18
5668 6157 2.158885 TCCAACCAATCACAGTCAACGA 60.159 45.455 0.00 0.00 0.00 3.85
5669 6158 2.217750 TCCAACCAATCACAGTCAACG 58.782 47.619 0.00 0.00 0.00 4.10
5670 6159 4.853924 ATTCCAACCAATCACAGTCAAC 57.146 40.909 0.00 0.00 0.00 3.18
5671 6160 6.244654 TCATATTCCAACCAATCACAGTCAA 58.755 36.000 0.00 0.00 0.00 3.18
5672 6161 5.814481 TCATATTCCAACCAATCACAGTCA 58.186 37.500 0.00 0.00 0.00 3.41
5673 6162 6.949352 ATCATATTCCAACCAATCACAGTC 57.051 37.500 0.00 0.00 0.00 3.51
5674 6163 8.821686 TTAATCATATTCCAACCAATCACAGT 57.178 30.769 0.00 0.00 0.00 3.55
5675 6164 8.355169 CCTTAATCATATTCCAACCAATCACAG 58.645 37.037 0.00 0.00 0.00 3.66
5676 6165 7.287466 CCCTTAATCATATTCCAACCAATCACA 59.713 37.037 0.00 0.00 0.00 3.58
5677 6166 7.255942 CCCCTTAATCATATTCCAACCAATCAC 60.256 40.741 0.00 0.00 0.00 3.06
5678 6167 6.782000 CCCCTTAATCATATTCCAACCAATCA 59.218 38.462 0.00 0.00 0.00 2.57
5679 6168 6.211384 CCCCCTTAATCATATTCCAACCAATC 59.789 42.308 0.00 0.00 0.00 2.67
5680 6169 6.084060 CCCCCTTAATCATATTCCAACCAAT 58.916 40.000 0.00 0.00 0.00 3.16
5681 6170 5.196779 TCCCCCTTAATCATATTCCAACCAA 59.803 40.000 0.00 0.00 0.00 3.67
5682 6171 4.734503 TCCCCCTTAATCATATTCCAACCA 59.265 41.667 0.00 0.00 0.00 3.67
5683 6172 5.077564 GTCCCCCTTAATCATATTCCAACC 58.922 45.833 0.00 0.00 0.00 3.77
5684 6173 4.760204 CGTCCCCCTTAATCATATTCCAAC 59.240 45.833 0.00 0.00 0.00 3.77
5685 6174 4.202524 CCGTCCCCCTTAATCATATTCCAA 60.203 45.833 0.00 0.00 0.00 3.53
5686 6175 3.329520 CCGTCCCCCTTAATCATATTCCA 59.670 47.826 0.00 0.00 0.00 3.53
5687 6176 3.872630 GCCGTCCCCCTTAATCATATTCC 60.873 52.174 0.00 0.00 0.00 3.01
5688 6177 3.344515 GCCGTCCCCCTTAATCATATTC 58.655 50.000 0.00 0.00 0.00 1.75
5689 6178 2.041216 GGCCGTCCCCCTTAATCATATT 59.959 50.000 0.00 0.00 0.00 1.28
5690 6179 1.633945 GGCCGTCCCCCTTAATCATAT 59.366 52.381 0.00 0.00 0.00 1.78
5691 6180 1.061546 GGCCGTCCCCCTTAATCATA 58.938 55.000 0.00 0.00 0.00 2.15
5692 6181 1.844130 GGCCGTCCCCCTTAATCAT 59.156 57.895 0.00 0.00 0.00 2.45
5693 6182 3.326900 GGCCGTCCCCCTTAATCA 58.673 61.111 0.00 0.00 0.00 2.57
5704 6193 2.781431 ATTTTCAGGGTGGGGCCGTC 62.781 60.000 0.00 0.00 38.44 4.79
5705 6194 2.781431 GATTTTCAGGGTGGGGCCGT 62.781 60.000 0.00 0.00 38.44 5.68
5706 6195 2.037208 ATTTTCAGGGTGGGGCCG 59.963 61.111 0.00 0.00 38.44 6.13
5707 6196 0.972471 CTGATTTTCAGGGTGGGGCC 60.972 60.000 0.00 0.00 40.71 5.80
5708 6197 2.583472 CTGATTTTCAGGGTGGGGC 58.417 57.895 0.00 0.00 40.71 5.80
5727 6216 3.157881 GCCTAATCTAATTGCTTCCCCC 58.842 50.000 0.00 0.00 0.00 5.40
5728 6217 3.157881 GGCCTAATCTAATTGCTTCCCC 58.842 50.000 0.00 0.00 0.00 4.81
5729 6218 3.570125 GTGGCCTAATCTAATTGCTTCCC 59.430 47.826 3.32 0.00 0.00 3.97
5730 6219 3.251004 CGTGGCCTAATCTAATTGCTTCC 59.749 47.826 3.32 0.00 0.00 3.46
5731 6220 3.251004 CCGTGGCCTAATCTAATTGCTTC 59.749 47.826 3.32 0.00 0.00 3.86
5732 6221 3.214328 CCGTGGCCTAATCTAATTGCTT 58.786 45.455 3.32 0.00 0.00 3.91
5733 6222 2.172717 ACCGTGGCCTAATCTAATTGCT 59.827 45.455 3.32 0.00 0.00 3.91
5734 6223 2.290641 CACCGTGGCCTAATCTAATTGC 59.709 50.000 3.32 0.00 0.00 3.56
5735 6224 3.541632 ACACCGTGGCCTAATCTAATTG 58.458 45.455 3.32 0.00 0.00 2.32
5736 6225 3.199071 TGACACCGTGGCCTAATCTAATT 59.801 43.478 3.32 0.00 0.00 1.40
5737 6226 2.769663 TGACACCGTGGCCTAATCTAAT 59.230 45.455 3.32 0.00 0.00 1.73
5738 6227 2.181125 TGACACCGTGGCCTAATCTAA 58.819 47.619 3.32 0.00 0.00 2.10
5739 6228 1.855295 TGACACCGTGGCCTAATCTA 58.145 50.000 3.32 0.00 0.00 1.98
5740 6229 1.139058 GATGACACCGTGGCCTAATCT 59.861 52.381 3.32 0.00 0.00 2.40
5741 6230 1.583054 GATGACACCGTGGCCTAATC 58.417 55.000 3.32 0.00 0.00 1.75
5742 6231 0.180406 GGATGACACCGTGGCCTAAT 59.820 55.000 3.32 0.00 0.00 1.73
5743 6232 0.907704 AGGATGACACCGTGGCCTAA 60.908 55.000 3.32 0.00 34.73 2.69
5744 6233 1.305802 AGGATGACACCGTGGCCTA 60.306 57.895 3.32 0.00 34.73 3.93
5745 6234 2.607750 AGGATGACACCGTGGCCT 60.608 61.111 3.32 0.50 34.73 5.19
5746 6235 1.895020 TACAGGATGACACCGTGGCC 61.895 60.000 0.75 0.00 39.69 5.36
5747 6236 0.036765 TTACAGGATGACACCGTGGC 60.037 55.000 3.03 0.00 39.69 5.01
5748 6237 2.465860 TTTACAGGATGACACCGTGG 57.534 50.000 3.03 0.00 39.69 4.94
5749 6238 3.399330 AGTTTTACAGGATGACACCGTG 58.601 45.455 0.00 0.00 39.69 4.94
5750 6239 3.764237 AGTTTTACAGGATGACACCGT 57.236 42.857 0.00 0.00 39.69 4.83
5751 6240 4.274950 ACAAAGTTTTACAGGATGACACCG 59.725 41.667 0.00 0.00 39.69 4.94
5752 6241 5.767816 ACAAAGTTTTACAGGATGACACC 57.232 39.130 0.00 0.00 39.69 4.16
5753 6242 6.201425 TCGTACAAAGTTTTACAGGATGACAC 59.799 38.462 0.00 0.00 39.69 3.67
5754 6243 6.282167 TCGTACAAAGTTTTACAGGATGACA 58.718 36.000 0.00 0.00 39.69 3.58
5755 6244 6.774354 TCGTACAAAGTTTTACAGGATGAC 57.226 37.500 0.00 0.00 39.69 3.06
5756 6245 7.156000 TGATCGTACAAAGTTTTACAGGATGA 58.844 34.615 0.00 0.00 39.69 2.92
5757 6246 7.359262 TGATCGTACAAAGTTTTACAGGATG 57.641 36.000 0.00 0.00 46.00 3.51
5758 6247 7.280205 GGATGATCGTACAAAGTTTTACAGGAT 59.720 37.037 0.00 0.00 0.00 3.24
5759 6248 6.592607 GGATGATCGTACAAAGTTTTACAGGA 59.407 38.462 0.00 0.00 0.00 3.86
5760 6249 6.594159 AGGATGATCGTACAAAGTTTTACAGG 59.406 38.462 0.00 0.00 0.00 4.00
5761 6250 7.117812 ACAGGATGATCGTACAAAGTTTTACAG 59.882 37.037 0.00 0.00 39.69 2.74
5762 6251 6.932400 ACAGGATGATCGTACAAAGTTTTACA 59.068 34.615 0.00 0.00 39.69 2.41
5763 6252 7.360575 ACAGGATGATCGTACAAAGTTTTAC 57.639 36.000 0.00 0.00 39.69 2.01
5764 6253 7.274033 CGTACAGGATGATCGTACAAAGTTTTA 59.726 37.037 0.00 0.00 39.69 1.52
5765 6254 6.090358 CGTACAGGATGATCGTACAAAGTTTT 59.910 38.462 0.00 0.00 39.69 2.43
5766 6255 5.575606 CGTACAGGATGATCGTACAAAGTTT 59.424 40.000 0.00 0.00 39.69 2.66
5767 6256 5.100259 CGTACAGGATGATCGTACAAAGTT 58.900 41.667 0.00 0.00 39.69 2.66
5768 6257 4.157289 ACGTACAGGATGATCGTACAAAGT 59.843 41.667 0.00 0.00 43.48 2.66
5769 6258 4.499399 CACGTACAGGATGATCGTACAAAG 59.501 45.833 0.00 0.00 43.46 2.77
5770 6259 4.082625 ACACGTACAGGATGATCGTACAAA 60.083 41.667 0.00 0.00 43.46 2.83
5771 6260 3.441222 ACACGTACAGGATGATCGTACAA 59.559 43.478 0.00 0.00 43.46 2.41
5772 6261 3.011818 ACACGTACAGGATGATCGTACA 58.988 45.455 0.00 0.00 43.46 2.90
5773 6262 3.687572 ACACGTACAGGATGATCGTAC 57.312 47.619 0.00 0.00 43.46 3.67
5774 6263 4.445453 ACTACACGTACAGGATGATCGTA 58.555 43.478 0.00 0.00 43.46 3.43
5775 6264 3.276857 ACTACACGTACAGGATGATCGT 58.723 45.455 0.00 0.00 45.16 3.73
5776 6265 3.965292 ACTACACGTACAGGATGATCG 57.035 47.619 0.00 0.00 39.69 3.69
5777 6266 9.343103 CAATAATACTACACGTACAGGATGATC 57.657 37.037 0.00 0.00 39.69 2.92
5778 6267 8.304596 CCAATAATACTACACGTACAGGATGAT 58.695 37.037 0.00 0.00 39.69 2.45
5779 6268 7.503230 TCCAATAATACTACACGTACAGGATGA 59.497 37.037 0.00 0.00 39.69 2.92
5780 6269 7.654568 TCCAATAATACTACACGTACAGGATG 58.345 38.462 0.00 0.00 46.00 3.51
5781 6270 7.523380 GCTCCAATAATACTACACGTACAGGAT 60.523 40.741 0.00 0.00 0.00 3.24
5782 6271 6.238842 GCTCCAATAATACTACACGTACAGGA 60.239 42.308 0.00 0.00 0.00 3.86
5783 6272 5.919141 GCTCCAATAATACTACACGTACAGG 59.081 44.000 0.00 0.00 0.00 4.00
5784 6273 6.736123 AGCTCCAATAATACTACACGTACAG 58.264 40.000 0.00 0.00 0.00 2.74
5785 6274 6.704289 AGCTCCAATAATACTACACGTACA 57.296 37.500 0.00 0.00 0.00 2.90
5786 6275 7.198390 TCAAGCTCCAATAATACTACACGTAC 58.802 38.462 0.00 0.00 0.00 3.67
5787 6276 7.337480 TCAAGCTCCAATAATACTACACGTA 57.663 36.000 0.00 0.00 0.00 3.57
5788 6277 6.216801 TCAAGCTCCAATAATACTACACGT 57.783 37.500 0.00 0.00 0.00 4.49
5789 6278 7.534085 TTTCAAGCTCCAATAATACTACACG 57.466 36.000 0.00 0.00 0.00 4.49
5794 6283 9.700831 AAGGTATTTTCAAGCTCCAATAATACT 57.299 29.630 13.60 0.00 31.22 2.12
5795 6284 9.952188 GAAGGTATTTTCAAGCTCCAATAATAC 57.048 33.333 0.00 0.00 0.00 1.89
5796 6285 9.920946 AGAAGGTATTTTCAAGCTCCAATAATA 57.079 29.630 0.00 0.00 0.00 0.98
5797 6286 8.829373 AGAAGGTATTTTCAAGCTCCAATAAT 57.171 30.769 0.00 0.00 0.00 1.28
5798 6287 8.650143 AAGAAGGTATTTTCAAGCTCCAATAA 57.350 30.769 0.00 0.00 0.00 1.40
5799 6288 7.339466 GGAAGAAGGTATTTTCAAGCTCCAATA 59.661 37.037 0.00 0.00 0.00 1.90
5800 6289 6.153510 GGAAGAAGGTATTTTCAAGCTCCAAT 59.846 38.462 0.00 0.00 0.00 3.16
5801 6290 5.476945 GGAAGAAGGTATTTTCAAGCTCCAA 59.523 40.000 0.00 0.00 0.00 3.53
5802 6291 5.010282 GGAAGAAGGTATTTTCAAGCTCCA 58.990 41.667 0.00 0.00 0.00 3.86
5803 6292 5.010282 TGGAAGAAGGTATTTTCAAGCTCC 58.990 41.667 0.00 0.00 0.00 4.70
5804 6293 6.575162 TTGGAAGAAGGTATTTTCAAGCTC 57.425 37.500 0.00 0.00 0.00 4.09
5805 6294 6.515035 CGTTTGGAAGAAGGTATTTTCAAGCT 60.515 38.462 0.00 0.00 0.00 3.74
5806 6295 5.629435 CGTTTGGAAGAAGGTATTTTCAAGC 59.371 40.000 0.00 0.00 0.00 4.01
5807 6296 6.149633 CCGTTTGGAAGAAGGTATTTTCAAG 58.850 40.000 0.00 0.00 37.49 3.02
5808 6297 5.508320 GCCGTTTGGAAGAAGGTATTTTCAA 60.508 40.000 0.00 0.00 37.49 2.69
5809 6298 4.022676 GCCGTTTGGAAGAAGGTATTTTCA 60.023 41.667 0.00 0.00 37.49 2.69
5810 6299 4.217767 AGCCGTTTGGAAGAAGGTATTTTC 59.782 41.667 0.00 0.00 37.49 2.29
5811 6300 4.149598 AGCCGTTTGGAAGAAGGTATTTT 58.850 39.130 0.00 0.00 37.49 1.82
5812 6301 3.763057 AGCCGTTTGGAAGAAGGTATTT 58.237 40.909 0.00 0.00 37.49 1.40
5821 6311 3.081804 AGACCATAAAGCCGTTTGGAAG 58.918 45.455 1.42 0.00 37.49 3.46
5857 6347 7.993183 CCAAAGGATAATCCAAAAGCTCTACTA 59.007 37.037 0.00 0.00 39.61 1.82
5858 6348 6.830838 CCAAAGGATAATCCAAAAGCTCTACT 59.169 38.462 0.00 0.00 39.61 2.57
5859 6349 6.603599 ACCAAAGGATAATCCAAAAGCTCTAC 59.396 38.462 0.00 0.00 39.61 2.59
5876 6366 7.032580 CGTGCATTTCATTAATTACCAAAGGA 58.967 34.615 0.00 0.00 0.00 3.36
5880 6370 5.714047 TGCGTGCATTTCATTAATTACCAA 58.286 33.333 0.00 0.00 0.00 3.67
5952 6442 0.026285 GCTGCAGCACGGTATTTACG 59.974 55.000 33.36 0.00 41.59 3.18
5955 6445 1.026718 GGAGCTGCAGCACGGTATTT 61.027 55.000 38.24 17.06 45.16 1.40
5956 6446 1.450312 GGAGCTGCAGCACGGTATT 60.450 57.895 38.24 17.87 45.16 1.89
5957 6447 1.903877 AAGGAGCTGCAGCACGGTAT 61.904 55.000 38.24 18.66 45.16 2.73
5961 6483 1.789078 AAACAAGGAGCTGCAGCACG 61.789 55.000 38.24 22.09 45.16 5.34
5964 6486 1.468736 GCATAAACAAGGAGCTGCAGC 60.469 52.381 31.53 31.53 42.49 5.25
5984 6506 8.079809 CACAGTAATGGTAGTAAAACTTTTGGG 58.920 37.037 0.00 0.00 0.00 4.12
6060 6628 4.546829 TCGAAAGGCTAACATAACAGGT 57.453 40.909 0.00 0.00 0.00 4.00
6103 6673 8.935844 CACATCAAAAGACTAACTAATACAGCA 58.064 33.333 0.00 0.00 0.00 4.41
6108 6678 7.101054 ACCGCACATCAAAAGACTAACTAATA 58.899 34.615 0.00 0.00 0.00 0.98
6109 6679 5.938125 ACCGCACATCAAAAGACTAACTAAT 59.062 36.000 0.00 0.00 0.00 1.73
6141 6712 3.532892 CGACGGCGTGATTAGTACTAT 57.467 47.619 21.19 0.00 0.00 2.12
6174 6745 2.257207 ACCCCCATCGATGTATACAGG 58.743 52.381 23.27 15.44 0.00 4.00
6181 6752 1.074471 AGGCTACCCCCATCGATGT 60.074 57.895 23.27 8.00 0.00 3.06
6270 6841 2.106566 CTGCTAGCCCCGATGATAGAT 58.893 52.381 13.29 0.00 0.00 1.98
6325 6896 2.482336 TGTGGCATTAGTTTAGTGCGTG 59.518 45.455 0.00 0.00 41.70 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.