Multiple sequence alignment - TraesCS3D01G353900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G353900 chr3D 100.000 2872 0 0 1 2872 464329944 464332815 0.000000e+00 5304.0
1 TraesCS3D01G353900 chr3D 80.941 1233 140 58 710 1912 464316028 464317195 0.000000e+00 887.0
2 TraesCS3D01G353900 chr3D 90.849 601 55 0 2269 2869 464719513 464720113 0.000000e+00 806.0
3 TraesCS3D01G353900 chr3D 79.730 814 100 44 999 1793 464323784 464324551 1.960000e-146 529.0
4 TraesCS3D01G353900 chr3D 88.742 151 17 0 1643 1793 464311343 464311493 4.890000e-43 185.0
5 TraesCS3D01G353900 chr3D 96.970 33 1 0 710 742 464323557 464323589 4.000000e-04 56.5
6 TraesCS3D01G353900 chr3A 85.382 1546 126 40 550 2079 607486337 607487798 0.000000e+00 1511.0
7 TraesCS3D01G353900 chr3A 90.593 776 37 12 2121 2872 607507941 607508704 0.000000e+00 996.0
8 TraesCS3D01G353900 chr3A 83.037 731 91 26 1191 1913 607467215 607467920 1.450000e-177 632.0
9 TraesCS3D01G353900 chr3A 87.845 543 50 11 1374 1912 607461866 607462396 8.740000e-175 623.0
10 TraesCS3D01G353900 chr3A 90.336 476 39 6 2319 2787 608111829 608112304 4.070000e-173 617.0
11 TraesCS3D01G353900 chr3A 89.823 452 34 9 1 446 530909584 530910029 1.150000e-158 569.0
12 TraesCS3D01G353900 chr3A 83.911 404 32 18 678 1072 607466753 607467132 3.520000e-94 355.0
13 TraesCS3D01G353900 chr3A 90.672 268 20 3 170 437 747152244 747152506 4.550000e-93 351.0
14 TraesCS3D01G353900 chr3A 88.485 165 17 1 1376 1540 607448315 607448477 6.280000e-47 198.0
15 TraesCS3D01G353900 chr3A 93.023 86 6 0 1191 1276 607461545 607461630 3.000000e-25 126.0
16 TraesCS3D01G353900 chr3A 97.059 68 2 0 2796 2863 608112785 608112852 6.500000e-22 115.0
17 TraesCS3D01G353900 chr3A 100.000 28 0 0 715 742 607459872 607459899 5.000000e-03 52.8
18 TraesCS3D01G353900 chr3B 86.125 1355 101 49 550 1878 618001883 618003176 0.000000e+00 1380.0
19 TraesCS3D01G353900 chr3B 90.717 614 57 0 2256 2869 618007517 618008130 0.000000e+00 819.0
20 TraesCS3D01G353900 chr3B 85.226 731 63 31 1191 1912 617886930 617887624 0.000000e+00 710.0
21 TraesCS3D01G353900 chr3B 87.529 425 40 9 1369 1793 617988532 617988943 2.000000e-131 479.0
22 TraesCS3D01G353900 chr3B 84.672 411 34 17 678 1080 617886453 617886842 1.610000e-102 383.0
23 TraesCS3D01G353900 chr3B 76.218 513 53 35 781 1276 617988002 617988462 1.040000e-49 207.0
24 TraesCS3D01G353900 chr3B 92.045 88 3 1 449 536 618001813 618001896 1.400000e-23 121.0
25 TraesCS3D01G353900 chr3B 91.489 47 4 0 1832 1878 617994078 617994124 6.640000e-07 65.8
26 TraesCS3D01G353900 chr4B 90.023 441 31 8 1 441 126972073 126971646 2.500000e-155 558.0
27 TraesCS3D01G353900 chr2A 84.155 568 87 2 2308 2872 9125540 9124973 5.410000e-152 547.0
28 TraesCS3D01G353900 chr1A 89.140 442 37 6 1 441 186997160 186997591 9.050000e-150 540.0
29 TraesCS3D01G353900 chr1A 91.354 347 22 5 100 445 553973374 553973035 4.330000e-128 468.0
30 TraesCS3D01G353900 chr1A 83.102 432 69 4 2309 2738 456244853 456244424 9.650000e-105 390.0
31 TraesCS3D01G353900 chr2B 84.229 558 79 4 2315 2872 13155523 13154975 4.210000e-148 534.0
32 TraesCS3D01G353900 chr2B 83.154 558 88 3 2315 2872 13220976 13220425 3.300000e-139 505.0
33 TraesCS3D01G353900 chr2B 81.605 598 87 9 2276 2872 13393569 13392994 9.310000e-130 473.0
34 TraesCS3D01G353900 chr1B 88.789 446 33 8 1 445 286971328 286971757 5.450000e-147 531.0
35 TraesCS3D01G353900 chr1B 89.877 326 26 3 115 440 286971195 286970877 2.060000e-111 412.0
36 TraesCS3D01G353900 chr5B 90.885 373 26 5 74 446 58902278 58902642 7.150000e-136 494.0
37 TraesCS3D01G353900 chr5B 89.619 289 23 3 115 403 58902121 58901840 7.560000e-96 361.0
38 TraesCS3D01G353900 chr5B 95.000 80 4 0 1191 1270 206763538 206763459 3.000000e-25 126.0
39 TraesCS3D01G353900 chr2D 87.302 441 42 5 1 435 319611019 319611451 2.570000e-135 492.0
40 TraesCS3D01G353900 chr2D 81.338 568 97 5 2314 2872 9874761 9874194 1.210000e-123 453.0
41 TraesCS3D01G353900 chr2D 80.143 559 100 6 2312 2869 10979611 10980159 9.580000e-110 407.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G353900 chr3D 464329944 464332815 2871 False 5304.000000 5304 100.000000 1 2872 1 chr3D.!!$F3 2871
1 TraesCS3D01G353900 chr3D 464316028 464317195 1167 False 887.000000 887 80.941000 710 1912 1 chr3D.!!$F2 1202
2 TraesCS3D01G353900 chr3D 464719513 464720113 600 False 806.000000 806 90.849000 2269 2869 1 chr3D.!!$F4 600
3 TraesCS3D01G353900 chr3D 464323557 464324551 994 False 292.750000 529 88.350000 710 1793 2 chr3D.!!$F5 1083
4 TraesCS3D01G353900 chr3A 607486337 607487798 1461 False 1511.000000 1511 85.382000 550 2079 1 chr3A.!!$F3 1529
5 TraesCS3D01G353900 chr3A 607507941 607508704 763 False 996.000000 996 90.593000 2121 2872 1 chr3A.!!$F4 751
6 TraesCS3D01G353900 chr3A 607466753 607467920 1167 False 493.500000 632 83.474000 678 1913 2 chr3A.!!$F7 1235
7 TraesCS3D01G353900 chr3A 608111829 608112852 1023 False 366.000000 617 93.697500 2319 2863 2 chr3A.!!$F8 544
8 TraesCS3D01G353900 chr3A 607459872 607462396 2524 False 267.266667 623 93.622667 715 1912 3 chr3A.!!$F6 1197
9 TraesCS3D01G353900 chr3B 618007517 618008130 613 False 819.000000 819 90.717000 2256 2869 1 chr3B.!!$F2 613
10 TraesCS3D01G353900 chr3B 618001813 618003176 1363 False 750.500000 1380 89.085000 449 1878 2 chr3B.!!$F5 1429
11 TraesCS3D01G353900 chr3B 617886453 617887624 1171 False 546.500000 710 84.949000 678 1912 2 chr3B.!!$F3 1234
12 TraesCS3D01G353900 chr3B 617988002 617988943 941 False 343.000000 479 81.873500 781 1793 2 chr3B.!!$F4 1012
13 TraesCS3D01G353900 chr2A 9124973 9125540 567 True 547.000000 547 84.155000 2308 2872 1 chr2A.!!$R1 564
14 TraesCS3D01G353900 chr2B 13154975 13155523 548 True 534.000000 534 84.229000 2315 2872 1 chr2B.!!$R1 557
15 TraesCS3D01G353900 chr2B 13220425 13220976 551 True 505.000000 505 83.154000 2315 2872 1 chr2B.!!$R2 557
16 TraesCS3D01G353900 chr2B 13392994 13393569 575 True 473.000000 473 81.605000 2276 2872 1 chr2B.!!$R3 596
17 TraesCS3D01G353900 chr2D 9874194 9874761 567 True 453.000000 453 81.338000 2314 2872 1 chr2D.!!$R1 558
18 TraesCS3D01G353900 chr2D 10979611 10980159 548 False 407.000000 407 80.143000 2312 2869 1 chr2D.!!$F1 557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
595 596 0.034198 TCACCGCGTGGAAATCTTCA 59.966 50.0 24.59 0.0 39.21 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2081 3631 0.103572 GATGGCCGTACACCGTATGT 59.896 55.0 0.0 0.0 46.06 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.823678 CCAGTATCAATAAACACGGACTAC 57.176 41.667 0.00 0.00 0.00 2.73
24 25 6.334989 CCAGTATCAATAAACACGGACTACA 58.665 40.000 0.00 0.00 0.00 2.74
25 26 6.984474 CCAGTATCAATAAACACGGACTACAT 59.016 38.462 0.00 0.00 0.00 2.29
26 27 8.139350 CCAGTATCAATAAACACGGACTACATA 58.861 37.037 0.00 0.00 0.00 2.29
27 28 8.965172 CAGTATCAATAAACACGGACTACATAC 58.035 37.037 0.00 0.00 0.00 2.39
28 29 8.910944 AGTATCAATAAACACGGACTACATACT 58.089 33.333 0.00 0.00 0.00 2.12
31 32 8.284945 TCAATAAACACGGACTACATACTACT 57.715 34.615 0.00 0.00 0.00 2.57
32 33 8.186163 TCAATAAACACGGACTACATACTACTG 58.814 37.037 0.00 0.00 0.00 2.74
33 34 5.972107 AAACACGGACTACATACTACTGT 57.028 39.130 0.00 0.00 0.00 3.55
34 35 8.737168 ATAAACACGGACTACATACTACTGTA 57.263 34.615 0.00 0.00 0.00 2.74
35 36 6.428385 AACACGGACTACATACTACTGTAC 57.572 41.667 0.00 0.00 0.00 2.90
36 37 5.491070 ACACGGACTACATACTACTGTACA 58.509 41.667 0.00 0.00 0.00 2.90
37 38 5.583854 ACACGGACTACATACTACTGTACAG 59.416 44.000 21.44 21.44 0.00 2.74
38 39 5.583854 CACGGACTACATACTACTGTACAGT 59.416 44.000 30.13 30.13 45.02 3.55
39 40 5.583854 ACGGACTACATACTACTGTACAGTG 59.416 44.000 33.77 25.07 42.52 3.66
40 41 5.583854 CGGACTACATACTACTGTACAGTGT 59.416 44.000 33.77 28.39 42.52 3.55
41 42 6.758416 CGGACTACATACTACTGTACAGTGTA 59.242 42.308 33.77 29.31 42.52 2.90
42 43 7.254252 CGGACTACATACTACTGTACAGTGTAC 60.254 44.444 33.77 23.85 42.52 2.90
43 44 7.254252 GGACTACATACTACTGTACAGTGTACG 60.254 44.444 33.77 25.74 42.52 3.67
44 45 7.099764 ACTACATACTACTGTACAGTGTACGT 58.900 38.462 33.77 28.78 42.52 3.57
45 46 8.251026 ACTACATACTACTGTACAGTGTACGTA 58.749 37.037 33.77 28.46 42.52 3.57
46 47 9.254133 CTACATACTACTGTACAGTGTACGTAT 57.746 37.037 33.77 26.90 42.52 3.06
47 48 8.498054 ACATACTACTGTACAGTGTACGTATT 57.502 34.615 33.77 22.14 42.52 1.89
48 49 8.950210 ACATACTACTGTACAGTGTACGTATTT 58.050 33.333 33.77 22.36 42.52 1.40
52 53 6.480524 ACTGTACAGTGTACGTATTTACGA 57.519 37.500 27.41 6.55 45.30 3.43
53 54 6.898041 ACTGTACAGTGTACGTATTTACGAA 58.102 36.000 27.41 5.91 45.30 3.85
54 55 7.017645 ACTGTACAGTGTACGTATTTACGAAG 58.982 38.462 27.41 15.70 45.30 3.79
55 56 7.095229 ACTGTACAGTGTACGTATTTACGAAGA 60.095 37.037 27.41 5.28 45.30 2.87
65 66 3.870633 ATTTACGAAGAGAAGAGCGGT 57.129 42.857 0.00 0.00 0.00 5.68
66 67 3.655276 TTTACGAAGAGAAGAGCGGTT 57.345 42.857 0.00 0.00 0.00 4.44
67 68 4.771590 TTTACGAAGAGAAGAGCGGTTA 57.228 40.909 0.00 0.00 0.00 2.85
68 69 2.633199 ACGAAGAGAAGAGCGGTTAC 57.367 50.000 0.00 0.00 0.00 2.50
69 70 1.884579 ACGAAGAGAAGAGCGGTTACA 59.115 47.619 0.00 0.00 0.00 2.41
70 71 2.251893 CGAAGAGAAGAGCGGTTACAC 58.748 52.381 0.00 0.00 0.00 2.90
71 72 2.608268 GAAGAGAAGAGCGGTTACACC 58.392 52.381 0.00 0.00 34.05 4.16
72 73 1.629043 AGAGAAGAGCGGTTACACCA 58.371 50.000 0.00 0.00 38.47 4.17
73 74 2.180276 AGAGAAGAGCGGTTACACCAT 58.820 47.619 0.00 0.00 38.47 3.55
74 75 3.362706 AGAGAAGAGCGGTTACACCATA 58.637 45.455 0.00 0.00 38.47 2.74
75 76 3.130693 AGAGAAGAGCGGTTACACCATAC 59.869 47.826 0.00 0.00 38.47 2.39
76 77 2.829720 AGAAGAGCGGTTACACCATACA 59.170 45.455 0.00 0.00 38.47 2.29
77 78 2.667473 AGAGCGGTTACACCATACAC 57.333 50.000 0.00 0.00 38.47 2.90
78 79 1.897133 AGAGCGGTTACACCATACACA 59.103 47.619 0.00 0.00 38.47 3.72
79 80 2.300723 AGAGCGGTTACACCATACACAA 59.699 45.455 0.00 0.00 38.47 3.33
80 81 2.671396 GAGCGGTTACACCATACACAAG 59.329 50.000 0.00 0.00 38.47 3.16
81 82 2.300723 AGCGGTTACACCATACACAAGA 59.699 45.455 0.00 0.00 38.47 3.02
82 83 2.671396 GCGGTTACACCATACACAAGAG 59.329 50.000 0.00 0.00 38.47 2.85
83 84 2.671396 CGGTTACACCATACACAAGAGC 59.329 50.000 0.00 0.00 38.47 4.09
84 85 3.616560 CGGTTACACCATACACAAGAGCT 60.617 47.826 0.00 0.00 38.47 4.09
85 86 4.381185 CGGTTACACCATACACAAGAGCTA 60.381 45.833 0.00 0.00 38.47 3.32
86 87 5.484715 GGTTACACCATACACAAGAGCTAA 58.515 41.667 0.00 0.00 38.42 3.09
87 88 5.350640 GGTTACACCATACACAAGAGCTAAC 59.649 44.000 0.00 0.00 38.42 2.34
88 89 4.891992 ACACCATACACAAGAGCTAACT 57.108 40.909 0.00 0.00 0.00 2.24
89 90 5.228945 ACACCATACACAAGAGCTAACTT 57.771 39.130 0.00 0.00 0.00 2.66
90 91 6.354794 ACACCATACACAAGAGCTAACTTA 57.645 37.500 0.00 0.00 0.00 2.24
91 92 6.765403 ACACCATACACAAGAGCTAACTTAA 58.235 36.000 0.00 0.00 0.00 1.85
92 93 6.874134 ACACCATACACAAGAGCTAACTTAAG 59.126 38.462 0.00 0.00 0.00 1.85
93 94 5.875359 ACCATACACAAGAGCTAACTTAAGC 59.125 40.000 1.29 0.00 43.11 3.09
94 95 5.874810 CCATACACAAGAGCTAACTTAAGCA 59.125 40.000 1.29 0.00 45.30 3.91
95 96 6.183360 CCATACACAAGAGCTAACTTAAGCAC 60.183 42.308 1.29 0.00 45.30 4.40
96 97 4.962155 ACACAAGAGCTAACTTAAGCACT 58.038 39.130 1.29 0.00 43.99 4.40
97 98 4.991687 ACACAAGAGCTAACTTAAGCACTC 59.008 41.667 1.29 4.63 41.73 3.51
98 99 4.090642 CACAAGAGCTAACTTAAGCACTCG 59.909 45.833 1.29 0.00 41.73 4.18
99 100 4.022242 ACAAGAGCTAACTTAAGCACTCGA 60.022 41.667 1.29 0.00 41.73 4.04
100 101 4.993029 AGAGCTAACTTAAGCACTCGAT 57.007 40.909 1.29 0.00 45.30 3.59
101 102 5.331876 AGAGCTAACTTAAGCACTCGATT 57.668 39.130 1.29 0.00 45.30 3.34
102 103 5.105752 AGAGCTAACTTAAGCACTCGATTG 58.894 41.667 1.29 0.00 45.30 2.67
103 104 5.073311 AGCTAACTTAAGCACTCGATTGA 57.927 39.130 6.99 0.00 45.30 2.57
104 105 5.665459 AGCTAACTTAAGCACTCGATTGAT 58.335 37.500 6.99 0.00 45.30 2.57
105 106 6.109359 AGCTAACTTAAGCACTCGATTGATT 58.891 36.000 11.13 11.13 45.30 2.57
106 107 6.595716 AGCTAACTTAAGCACTCGATTGATTT 59.404 34.615 11.61 5.11 45.30 2.17
107 108 7.119846 AGCTAACTTAAGCACTCGATTGATTTT 59.880 33.333 11.61 3.38 45.30 1.82
108 109 7.426743 GCTAACTTAAGCACTCGATTGATTTTC 59.573 37.037 11.61 0.00 42.30 2.29
109 110 7.440523 AACTTAAGCACTCGATTGATTTTCT 57.559 32.000 11.61 0.00 0.00 2.52
110 111 7.440523 ACTTAAGCACTCGATTGATTTTCTT 57.559 32.000 11.61 4.96 0.00 2.52
111 112 7.875971 ACTTAAGCACTCGATTGATTTTCTTT 58.124 30.769 11.61 0.00 0.00 2.52
112 113 7.805071 ACTTAAGCACTCGATTGATTTTCTTTG 59.195 33.333 11.61 2.72 0.00 2.77
113 114 5.051891 AGCACTCGATTGATTTTCTTTGG 57.948 39.130 6.99 0.00 0.00 3.28
114 115 4.761739 AGCACTCGATTGATTTTCTTTGGA 59.238 37.500 6.99 0.00 0.00 3.53
115 116 5.241506 AGCACTCGATTGATTTTCTTTGGAA 59.758 36.000 6.99 0.00 0.00 3.53
116 117 5.570589 GCACTCGATTGATTTTCTTTGGAAG 59.429 40.000 6.99 0.00 32.61 3.46
117 118 6.672147 CACTCGATTGATTTTCTTTGGAAGT 58.328 36.000 0.00 0.00 32.61 3.01
118 119 7.141363 CACTCGATTGATTTTCTTTGGAAGTT 58.859 34.615 0.00 0.00 32.61 2.66
119 120 7.113965 CACTCGATTGATTTTCTTTGGAAGTTG 59.886 37.037 0.00 0.00 32.61 3.16
120 121 6.446318 TCGATTGATTTTCTTTGGAAGTTGG 58.554 36.000 0.00 0.00 32.61 3.77
121 122 5.119125 CGATTGATTTTCTTTGGAAGTTGGC 59.881 40.000 0.00 0.00 32.61 4.52
122 123 5.612725 TTGATTTTCTTTGGAAGTTGGCT 57.387 34.783 0.00 0.00 32.61 4.75
123 124 5.200368 TGATTTTCTTTGGAAGTTGGCTC 57.800 39.130 0.00 0.00 32.61 4.70
124 125 4.039124 TGATTTTCTTTGGAAGTTGGCTCC 59.961 41.667 0.00 0.00 32.61 4.70
125 126 1.995376 TTCTTTGGAAGTTGGCTCCC 58.005 50.000 0.00 0.00 0.00 4.30
126 127 0.250727 TCTTTGGAAGTTGGCTCCCG 60.251 55.000 0.00 0.00 0.00 5.14
127 128 1.866853 CTTTGGAAGTTGGCTCCCGC 61.867 60.000 0.00 0.00 0.00 6.13
128 129 2.632602 TTTGGAAGTTGGCTCCCGCA 62.633 55.000 0.00 0.00 38.10 5.69
129 130 2.747855 GGAAGTTGGCTCCCGCAG 60.748 66.667 0.00 0.00 38.10 5.18
137 138 2.202946 GCTCCCGCAGCTAGGAAC 60.203 66.667 8.84 0.00 45.83 3.62
138 139 2.501610 CTCCCGCAGCTAGGAACC 59.498 66.667 8.84 0.00 0.00 3.62
139 140 3.432051 CTCCCGCAGCTAGGAACCG 62.432 68.421 8.84 0.00 0.00 4.44
140 141 3.458163 CCCGCAGCTAGGAACCGA 61.458 66.667 8.84 0.00 0.00 4.69
141 142 2.577059 CCGCAGCTAGGAACCGAA 59.423 61.111 1.34 0.00 0.00 4.30
142 143 1.810030 CCGCAGCTAGGAACCGAAC 60.810 63.158 1.34 0.00 0.00 3.95
143 144 1.810030 CGCAGCTAGGAACCGAACC 60.810 63.158 0.00 0.00 0.00 3.62
144 145 1.295423 GCAGCTAGGAACCGAACCA 59.705 57.895 0.00 0.00 0.00 3.67
145 146 0.741221 GCAGCTAGGAACCGAACCAG 60.741 60.000 0.00 0.00 0.00 4.00
146 147 0.741221 CAGCTAGGAACCGAACCAGC 60.741 60.000 0.00 0.00 34.38 4.85
147 148 0.905337 AGCTAGGAACCGAACCAGCT 60.905 55.000 0.00 0.00 37.21 4.24
148 149 0.741221 GCTAGGAACCGAACCAGCTG 60.741 60.000 6.78 6.78 32.82 4.24
149 150 0.108138 CTAGGAACCGAACCAGCTGG 60.108 60.000 31.60 31.60 42.17 4.85
150 151 0.543410 TAGGAACCGAACCAGCTGGA 60.543 55.000 39.19 9.77 38.94 3.86
151 152 1.671379 GGAACCGAACCAGCTGGAC 60.671 63.158 39.19 27.58 38.94 4.02
152 153 1.070786 GAACCGAACCAGCTGGACA 59.929 57.895 39.19 0.00 38.94 4.02
153 154 0.951040 GAACCGAACCAGCTGGACAG 60.951 60.000 39.19 25.55 38.94 3.51
163 164 2.588596 CTGGACAGCACACACGCA 60.589 61.111 0.00 0.00 0.00 5.24
164 165 2.588596 TGGACAGCACACACGCAG 60.589 61.111 0.00 0.00 0.00 5.18
165 166 4.017877 GGACAGCACACACGCAGC 62.018 66.667 0.00 0.00 0.00 5.25
166 167 2.969238 GACAGCACACACGCAGCT 60.969 61.111 0.00 0.00 39.63 4.24
167 168 1.664649 GACAGCACACACGCAGCTA 60.665 57.895 0.00 0.00 36.73 3.32
168 169 1.621301 GACAGCACACACGCAGCTAG 61.621 60.000 0.00 0.00 36.73 3.42
169 170 1.665916 CAGCACACACGCAGCTAGT 60.666 57.895 0.00 0.00 36.73 2.57
170 171 0.388520 CAGCACACACGCAGCTAGTA 60.389 55.000 0.00 0.00 36.73 1.82
171 172 0.109086 AGCACACACGCAGCTAGTAG 60.109 55.000 0.00 0.00 36.73 2.57
172 173 0.388649 GCACACACGCAGCTAGTAGT 60.389 55.000 0.00 0.00 0.00 2.73
173 174 1.935300 GCACACACGCAGCTAGTAGTT 60.935 52.381 0.00 0.00 0.00 2.24
174 175 1.986378 CACACACGCAGCTAGTAGTTC 59.014 52.381 0.00 0.00 0.00 3.01
175 176 1.260206 CACACGCAGCTAGTAGTTCG 58.740 55.000 0.00 3.10 0.00 3.95
176 177 0.456312 ACACGCAGCTAGTAGTTCGC 60.456 55.000 0.00 0.00 0.00 4.70
177 178 0.179161 CACGCAGCTAGTAGTTCGCT 60.179 55.000 0.00 0.00 0.00 4.93
178 179 1.063616 CACGCAGCTAGTAGTTCGCTA 59.936 52.381 0.00 0.00 31.80 4.26
179 180 1.948145 ACGCAGCTAGTAGTTCGCTAT 59.052 47.619 0.00 0.00 31.80 2.97
180 181 3.059120 CACGCAGCTAGTAGTTCGCTATA 60.059 47.826 0.00 0.00 31.80 1.31
181 182 3.059051 ACGCAGCTAGTAGTTCGCTATAC 60.059 47.826 0.00 0.00 31.80 1.47
182 183 3.186817 CGCAGCTAGTAGTTCGCTATACT 59.813 47.826 0.00 0.00 36.28 2.12
183 184 4.319622 CGCAGCTAGTAGTTCGCTATACTT 60.320 45.833 0.00 0.00 34.21 2.24
184 185 5.107182 CGCAGCTAGTAGTTCGCTATACTTA 60.107 44.000 0.00 0.00 34.21 2.24
185 186 6.308675 GCAGCTAGTAGTTCGCTATACTTAG 58.691 44.000 0.00 0.00 34.21 2.18
186 187 6.308675 CAGCTAGTAGTTCGCTATACTTAGC 58.691 44.000 0.00 0.00 46.16 3.09
187 188 5.412286 AGCTAGTAGTTCGCTATACTTAGCC 59.588 44.000 0.00 0.00 46.80 3.93
188 189 4.745837 AGTAGTTCGCTATACTTAGCCG 57.254 45.455 0.00 0.00 46.80 5.52
189 190 2.418983 AGTTCGCTATACTTAGCCGC 57.581 50.000 0.00 0.00 46.80 6.53
190 191 1.679680 AGTTCGCTATACTTAGCCGCA 59.320 47.619 0.00 0.00 46.80 5.69
191 192 2.296471 AGTTCGCTATACTTAGCCGCAT 59.704 45.455 0.00 0.00 46.80 4.73
192 193 3.504906 AGTTCGCTATACTTAGCCGCATA 59.495 43.478 0.00 0.00 46.80 3.14
193 194 3.482722 TCGCTATACTTAGCCGCATAC 57.517 47.619 0.00 0.00 46.80 2.39
194 195 2.815503 TCGCTATACTTAGCCGCATACA 59.184 45.455 0.00 0.00 46.80 2.29
195 196 3.253921 TCGCTATACTTAGCCGCATACAA 59.746 43.478 0.00 0.00 46.80 2.41
196 197 3.364023 CGCTATACTTAGCCGCATACAAC 59.636 47.826 0.00 0.00 46.80 3.32
197 198 4.304110 GCTATACTTAGCCGCATACAACA 58.696 43.478 0.00 0.00 44.29 3.33
198 199 4.748102 GCTATACTTAGCCGCATACAACAA 59.252 41.667 0.00 0.00 44.29 2.83
199 200 5.235616 GCTATACTTAGCCGCATACAACAAA 59.764 40.000 0.00 0.00 44.29 2.83
200 201 3.824414 ACTTAGCCGCATACAACAAAC 57.176 42.857 0.00 0.00 0.00 2.93
201 202 2.486592 ACTTAGCCGCATACAACAAACC 59.513 45.455 0.00 0.00 0.00 3.27
202 203 2.186532 TAGCCGCATACAACAAACCA 57.813 45.000 0.00 0.00 0.00 3.67
203 204 1.323412 AGCCGCATACAACAAACCAA 58.677 45.000 0.00 0.00 0.00 3.67
204 205 1.269448 AGCCGCATACAACAAACCAAG 59.731 47.619 0.00 0.00 0.00 3.61
205 206 1.696988 CCGCATACAACAAACCAAGC 58.303 50.000 0.00 0.00 0.00 4.01
206 207 1.668628 CCGCATACAACAAACCAAGCC 60.669 52.381 0.00 0.00 0.00 4.35
207 208 1.696988 GCATACAACAAACCAAGCCG 58.303 50.000 0.00 0.00 0.00 5.52
208 209 1.668628 GCATACAACAAACCAAGCCGG 60.669 52.381 0.00 0.00 42.50 6.13
209 210 0.601057 ATACAACAAACCAAGCCGGC 59.399 50.000 21.89 21.89 39.03 6.13
210 211 1.457009 TACAACAAACCAAGCCGGCC 61.457 55.000 26.15 5.07 39.03 6.13
211 212 3.601685 AACAAACCAAGCCGGCCG 61.602 61.111 26.15 21.04 39.03 6.13
223 224 2.540145 CCGGCCGGACATTATTAGC 58.460 57.895 41.82 0.00 37.50 3.09
224 225 0.250124 CCGGCCGGACATTATTAGCA 60.250 55.000 41.82 0.00 37.50 3.49
225 226 0.865769 CGGCCGGACATTATTAGCAC 59.134 55.000 20.10 0.00 0.00 4.40
226 227 0.865769 GGCCGGACATTATTAGCACG 59.134 55.000 5.05 0.00 0.00 5.34
227 228 1.578583 GCCGGACATTATTAGCACGT 58.421 50.000 5.05 0.00 0.00 4.49
228 229 2.546373 GGCCGGACATTATTAGCACGTA 60.546 50.000 5.05 0.00 0.00 3.57
229 230 2.729882 GCCGGACATTATTAGCACGTAG 59.270 50.000 5.05 0.00 0.00 3.51
244 245 2.558378 ACGTAGTGCTAGCGTCTATGA 58.442 47.619 29.15 9.87 42.51 2.15
245 246 2.941064 ACGTAGTGCTAGCGTCTATGAA 59.059 45.455 29.15 9.60 42.51 2.57
246 247 3.564644 ACGTAGTGCTAGCGTCTATGAAT 59.435 43.478 29.15 15.45 42.51 2.57
247 248 4.036498 ACGTAGTGCTAGCGTCTATGAATT 59.964 41.667 29.15 14.98 42.51 2.17
248 249 4.976731 CGTAGTGCTAGCGTCTATGAATTT 59.023 41.667 23.17 2.66 0.00 1.82
249 250 5.459107 CGTAGTGCTAGCGTCTATGAATTTT 59.541 40.000 23.17 2.13 0.00 1.82
250 251 6.019801 CGTAGTGCTAGCGTCTATGAATTTTT 60.020 38.462 23.17 1.59 0.00 1.94
272 273 5.966853 TTTATCACATACCACATCAGGGA 57.033 39.130 0.00 0.00 0.00 4.20
273 274 6.514012 TTTATCACATACCACATCAGGGAT 57.486 37.500 0.00 0.00 30.05 3.85
274 275 7.625498 TTTATCACATACCACATCAGGGATA 57.375 36.000 0.00 0.00 28.55 2.59
275 276 7.625498 TTATCACATACCACATCAGGGATAA 57.375 36.000 0.00 0.00 28.55 1.75
276 277 5.966853 TCACATACCACATCAGGGATAAA 57.033 39.130 0.00 0.00 28.55 1.40
277 278 6.320434 TCACATACCACATCAGGGATAAAA 57.680 37.500 0.00 0.00 28.55 1.52
278 279 6.726379 TCACATACCACATCAGGGATAAAAA 58.274 36.000 0.00 0.00 28.55 1.94
279 280 6.828273 TCACATACCACATCAGGGATAAAAAG 59.172 38.462 0.00 0.00 28.55 2.27
280 281 6.039717 CACATACCACATCAGGGATAAAAAGG 59.960 42.308 0.00 0.00 28.55 3.11
281 282 4.675063 ACCACATCAGGGATAAAAAGGT 57.325 40.909 0.00 0.00 0.00 3.50
282 283 4.600062 ACCACATCAGGGATAAAAAGGTC 58.400 43.478 0.00 0.00 0.00 3.85
283 284 4.292306 ACCACATCAGGGATAAAAAGGTCT 59.708 41.667 0.00 0.00 0.00 3.85
284 285 5.222337 ACCACATCAGGGATAAAAAGGTCTT 60.222 40.000 0.00 0.00 0.00 3.01
285 286 5.716703 CCACATCAGGGATAAAAAGGTCTTT 59.283 40.000 0.00 0.00 0.00 2.52
286 287 6.889722 CCACATCAGGGATAAAAAGGTCTTTA 59.110 38.462 0.00 0.00 31.63 1.85
287 288 7.148069 CCACATCAGGGATAAAAAGGTCTTTAC 60.148 40.741 0.00 0.00 31.63 2.01
288 289 7.393234 CACATCAGGGATAAAAAGGTCTTTACA 59.607 37.037 0.00 0.00 31.63 2.41
289 290 8.116026 ACATCAGGGATAAAAAGGTCTTTACAT 58.884 33.333 0.00 0.00 31.63 2.29
290 291 9.627123 CATCAGGGATAAAAAGGTCTTTACATA 57.373 33.333 0.00 0.00 31.63 2.29
292 293 9.627123 TCAGGGATAAAAAGGTCTTTACATATG 57.373 33.333 0.00 0.00 31.63 1.78
293 294 9.408648 CAGGGATAAAAAGGTCTTTACATATGT 57.591 33.333 13.93 13.93 31.63 2.29
294 295 9.628500 AGGGATAAAAAGGTCTTTACATATGTC 57.372 33.333 12.68 0.00 31.63 3.06
295 296 9.403583 GGGATAAAAAGGTCTTTACATATGTCA 57.596 33.333 12.68 0.00 31.63 3.58
304 305 9.174166 AGGTCTTTACATATGTCAATTAACACC 57.826 33.333 12.68 9.05 30.55 4.16
305 306 9.174166 GGTCTTTACATATGTCAATTAACACCT 57.826 33.333 12.68 0.00 30.55 4.00
312 313 8.466798 ACATATGTCAATTAACACCTTTAAGCC 58.533 33.333 1.41 0.00 30.55 4.35
313 314 8.686334 CATATGTCAATTAACACCTTTAAGCCT 58.314 33.333 0.00 0.00 30.55 4.58
314 315 6.969993 TGTCAATTAACACCTTTAAGCCTT 57.030 33.333 0.00 0.00 0.00 4.35
315 316 8.644374 ATGTCAATTAACACCTTTAAGCCTTA 57.356 30.769 0.00 0.00 30.55 2.69
316 317 8.466617 TGTCAATTAACACCTTTAAGCCTTAA 57.533 30.769 0.00 0.00 0.00 1.85
317 318 8.915036 TGTCAATTAACACCTTTAAGCCTTAAA 58.085 29.630 9.19 9.19 34.24 1.52
318 319 9.752961 GTCAATTAACACCTTTAAGCCTTAAAA 57.247 29.630 10.63 0.00 34.93 1.52
324 325 7.373778 ACACCTTTAAGCCTTAAAATAGACG 57.626 36.000 10.63 0.00 34.93 4.18
325 326 7.163441 ACACCTTTAAGCCTTAAAATAGACGA 58.837 34.615 10.63 0.00 34.93 4.20
326 327 7.662669 ACACCTTTAAGCCTTAAAATAGACGAA 59.337 33.333 10.63 0.00 34.93 3.85
327 328 8.508875 CACCTTTAAGCCTTAAAATAGACGAAA 58.491 33.333 10.63 0.00 34.93 3.46
328 329 8.727910 ACCTTTAAGCCTTAAAATAGACGAAAG 58.272 33.333 10.63 0.00 34.93 2.62
329 330 8.727910 CCTTTAAGCCTTAAAATAGACGAAAGT 58.272 33.333 10.63 0.00 40.00 2.66
330 331 9.543018 CTTTAAGCCTTAAAATAGACGAAAGTG 57.457 33.333 10.63 0.00 38.45 3.16
331 332 9.059260 TTTAAGCCTTAAAATAGACGAAAGTGT 57.941 29.630 7.17 0.00 36.95 3.55
360 361 8.742554 AAAAGGCATAAAATTTAGACTCGTTG 57.257 30.769 0.00 0.00 0.00 4.10
361 362 7.448748 AAGGCATAAAATTTAGACTCGTTGT 57.551 32.000 0.00 0.00 0.00 3.32
362 363 7.448748 AGGCATAAAATTTAGACTCGTTGTT 57.551 32.000 0.00 0.00 0.00 2.83
363 364 8.556213 AGGCATAAAATTTAGACTCGTTGTTA 57.444 30.769 0.00 0.00 0.00 2.41
364 365 9.174166 AGGCATAAAATTTAGACTCGTTGTTAT 57.826 29.630 0.00 0.00 0.00 1.89
411 412 9.717942 TTGGTGTCAAATAGGGAAATAAAATTG 57.282 29.630 0.00 0.00 0.00 2.32
412 413 9.094578 TGGTGTCAAATAGGGAAATAAAATTGA 57.905 29.630 0.00 0.00 0.00 2.57
413 414 9.936759 GGTGTCAAATAGGGAAATAAAATTGAA 57.063 29.630 0.00 0.00 0.00 2.69
420 421 9.927668 AATAGGGAAATAAAATTGAACACAGTG 57.072 29.630 0.00 0.00 0.00 3.66
421 422 7.360113 AGGGAAATAAAATTGAACACAGTGT 57.640 32.000 0.00 0.00 0.00 3.55
422 423 7.791029 AGGGAAATAAAATTGAACACAGTGTT 58.209 30.769 19.23 19.23 44.37 3.32
423 424 8.919145 AGGGAAATAAAATTGAACACAGTGTTA 58.081 29.630 19.17 5.10 41.28 2.41
424 425 9.535878 GGGAAATAAAATTGAACACAGTGTTAA 57.464 29.630 19.17 9.35 41.28 2.01
435 436 9.959749 TTGAACACAGTGTTAAATAAGGAATTC 57.040 29.630 19.17 2.77 41.28 2.17
436 437 9.349713 TGAACACAGTGTTAAATAAGGAATTCT 57.650 29.630 19.17 0.00 41.28 2.40
455 456 9.106070 GGAATTCTTTCTAAATACGTATGTGGT 57.894 33.333 9.24 0.00 32.16 4.16
470 471 1.658114 TGGTGTCGAGACCAAGTCG 59.342 57.895 30.45 0.00 43.31 4.18
492 493 4.616143 CGTGCTACGTTGCTATGGATCTAT 60.616 45.833 22.01 0.00 36.74 1.98
493 494 4.859798 GTGCTACGTTGCTATGGATCTATC 59.140 45.833 22.01 0.00 0.00 2.08
494 495 4.522789 TGCTACGTTGCTATGGATCTATCA 59.477 41.667 22.01 0.00 0.00 2.15
495 496 5.010617 TGCTACGTTGCTATGGATCTATCAA 59.989 40.000 22.01 0.00 0.00 2.57
496 497 5.346281 GCTACGTTGCTATGGATCTATCAAC 59.654 44.000 14.88 11.43 0.00 3.18
522 523 2.994995 ATGCGAGACCACGGTCCA 60.995 61.111 12.66 4.49 45.59 4.02
523 524 2.579657 ATGCGAGACCACGGTCCAA 61.580 57.895 12.66 0.00 45.59 3.53
524 525 2.737376 GCGAGACCACGGTCCAAC 60.737 66.667 12.66 4.42 45.59 3.77
525 526 3.048602 CGAGACCACGGTCCAACT 58.951 61.111 12.66 0.00 45.59 3.16
526 527 1.080705 CGAGACCACGGTCCAACTC 60.081 63.158 12.66 3.14 45.59 3.01
527 528 1.292541 GAGACCACGGTCCAACTCC 59.707 63.158 12.66 0.00 45.59 3.85
528 529 1.458777 AGACCACGGTCCAACTCCA 60.459 57.895 12.66 0.00 45.59 3.86
529 530 1.052124 AGACCACGGTCCAACTCCAA 61.052 55.000 12.66 0.00 45.59 3.53
530 531 0.602905 GACCACGGTCCAACTCCAAG 60.603 60.000 4.78 0.00 39.08 3.61
531 532 1.342672 ACCACGGTCCAACTCCAAGT 61.343 55.000 0.00 0.00 0.00 3.16
532 533 0.682852 CCACGGTCCAACTCCAAGTA 59.317 55.000 0.00 0.00 0.00 2.24
533 534 1.607251 CCACGGTCCAACTCCAAGTAC 60.607 57.143 0.00 0.00 0.00 2.73
534 535 0.316204 ACGGTCCAACTCCAAGTACG 59.684 55.000 0.00 0.00 0.00 3.67
535 536 0.316204 CGGTCCAACTCCAAGTACGT 59.684 55.000 0.00 0.00 0.00 3.57
536 537 1.792006 GGTCCAACTCCAAGTACGTG 58.208 55.000 0.00 1.33 0.00 4.49
537 538 1.342174 GGTCCAACTCCAAGTACGTGA 59.658 52.381 10.61 0.00 0.00 4.35
538 539 2.401351 GTCCAACTCCAAGTACGTGAC 58.599 52.381 10.61 0.00 0.00 3.67
539 540 1.342174 TCCAACTCCAAGTACGTGACC 59.658 52.381 10.61 0.00 0.00 4.02
540 541 1.607251 CCAACTCCAAGTACGTGACCC 60.607 57.143 10.61 0.00 0.00 4.46
541 542 1.343465 CAACTCCAAGTACGTGACCCT 59.657 52.381 10.61 0.00 0.00 4.34
542 543 2.559668 CAACTCCAAGTACGTGACCCTA 59.440 50.000 10.61 0.00 0.00 3.53
543 544 2.880443 ACTCCAAGTACGTGACCCTAA 58.120 47.619 10.61 0.00 0.00 2.69
544 545 3.233507 ACTCCAAGTACGTGACCCTAAA 58.766 45.455 10.61 0.00 0.00 1.85
545 546 3.642848 ACTCCAAGTACGTGACCCTAAAA 59.357 43.478 10.61 0.00 0.00 1.52
546 547 4.101430 ACTCCAAGTACGTGACCCTAAAAA 59.899 41.667 10.61 0.00 0.00 1.94
595 596 0.034198 TCACCGCGTGGAAATCTTCA 59.966 50.000 24.59 0.00 39.21 3.02
607 608 1.858091 AATCTTCATAGGCGTCAGCG 58.142 50.000 0.00 0.00 46.35 5.18
637 638 0.508641 CAACACTCGGTTTCTCGCAG 59.491 55.000 0.00 0.00 37.72 5.18
763 764 3.414269 GGAGTTTTGAATGGACCCGTAA 58.586 45.455 0.00 0.00 0.00 3.18
958 2251 3.379445 GTGTTCGCGGGAGAGGGA 61.379 66.667 6.13 0.00 0.00 4.20
1003 2305 2.005451 GCGAGATTGACAGAGCAATGT 58.995 47.619 0.00 0.00 38.53 2.71
1083 2390 3.311110 GGTGAGTGCTCCACCGGA 61.311 66.667 9.46 0.00 43.80 5.14
1095 2402 0.250295 CCACCGGAGTTTGCAGAAGA 60.250 55.000 9.46 0.00 0.00 2.87
1096 2403 1.151668 CACCGGAGTTTGCAGAAGAG 58.848 55.000 9.46 0.00 0.00 2.85
1097 2404 0.603975 ACCGGAGTTTGCAGAAGAGC 60.604 55.000 9.46 0.00 0.00 4.09
1098 2405 0.603707 CCGGAGTTTGCAGAAGAGCA 60.604 55.000 0.00 0.00 43.99 4.26
1099 2406 0.795085 CGGAGTTTGCAGAAGAGCAG 59.205 55.000 0.00 0.00 46.54 4.24
1100 2407 0.520847 GGAGTTTGCAGAAGAGCAGC 59.479 55.000 0.00 0.00 46.54 5.25
1101 2408 0.520847 GAGTTTGCAGAAGAGCAGCC 59.479 55.000 0.00 0.00 46.54 4.85
1102 2409 0.179009 AGTTTGCAGAAGAGCAGCCA 60.179 50.000 0.00 0.00 46.54 4.75
1107 2414 1.673665 CAGAAGAGCAGCCACCACC 60.674 63.158 0.00 0.00 0.00 4.61
1108 2415 2.149383 AGAAGAGCAGCCACCACCA 61.149 57.895 0.00 0.00 0.00 4.17
1122 2435 0.746563 CCACCACACGTGTTCTTGGT 60.747 55.000 20.79 20.14 43.39 3.67
1123 2436 0.655733 CACCACACGTGTTCTTGGTC 59.344 55.000 20.79 0.00 40.51 4.02
1141 2454 1.663135 GTCTGGCTTCGATTTGCTCTC 59.337 52.381 5.74 0.00 0.00 3.20
1146 2461 3.195610 TGGCTTCGATTTGCTCTCTTCTA 59.804 43.478 5.74 0.00 0.00 2.10
1151 2466 4.987832 TCGATTTGCTCTCTTCTAGTGTC 58.012 43.478 0.00 0.00 0.00 3.67
1152 2467 4.702612 TCGATTTGCTCTCTTCTAGTGTCT 59.297 41.667 0.00 0.00 0.00 3.41
1157 2472 2.495669 GCTCTCTTCTAGTGTCTGGCTT 59.504 50.000 0.00 0.00 0.00 4.35
1158 2473 3.675775 GCTCTCTTCTAGTGTCTGGCTTG 60.676 52.174 0.00 0.00 0.00 4.01
1168 2490 3.776969 AGTGTCTGGCTTGGATTCATCTA 59.223 43.478 0.00 0.00 0.00 1.98
1177 2499 7.125391 TGGCTTGGATTCATCTAATTTTACCT 58.875 34.615 0.00 0.00 0.00 3.08
1179 2501 7.255625 GGCTTGGATTCATCTAATTTTACCTCC 60.256 40.741 0.00 0.00 0.00 4.30
1180 2502 7.285401 GCTTGGATTCATCTAATTTTACCTCCA 59.715 37.037 0.00 0.00 0.00 3.86
1282 2647 2.106338 TCAGTGCCTTCTTCCACAATCA 59.894 45.455 0.00 0.00 34.48 2.57
1289 2657 1.890876 TCTTCCACAATCACAACCCG 58.109 50.000 0.00 0.00 0.00 5.28
1306 2678 1.073199 CGGCTCCACCCTTGACTTT 59.927 57.895 0.00 0.00 33.26 2.66
1307 2679 0.955919 CGGCTCCACCCTTGACTTTC 60.956 60.000 0.00 0.00 33.26 2.62
1310 2682 1.897560 CTCCACCCTTGACTTTCACC 58.102 55.000 0.00 0.00 0.00 4.02
1311 2683 1.142870 CTCCACCCTTGACTTTCACCA 59.857 52.381 0.00 0.00 0.00 4.17
1316 2690 2.443255 ACCCTTGACTTTCACCATGTCT 59.557 45.455 0.00 0.00 31.94 3.41
1342 2722 6.498303 ACCAGCAATCCATACTATGACTATGA 59.502 38.462 0.00 0.00 0.00 2.15
1421 2951 1.210967 TGGAACGAGGTGTTGAGGTTT 59.789 47.619 0.00 0.00 42.09 3.27
1545 3075 5.491800 TGAGTAAACTCCTACTCCTAGTCCT 59.508 44.000 7.63 0.00 44.89 3.85
1576 3108 1.333931 CATCACCATCAGCATCAGCAC 59.666 52.381 0.00 0.00 45.49 4.40
1592 3129 5.565592 TCAGCACATAACTAAAATGGCAG 57.434 39.130 0.00 0.00 0.00 4.85
1597 3134 7.859377 CAGCACATAACTAAAATGGCAGATTAG 59.141 37.037 16.28 16.28 33.79 1.73
1599 3136 8.571336 GCACATAACTAAAATGGCAGATTAGAT 58.429 33.333 21.86 15.39 32.34 1.98
1615 3155 9.614792 GCAGATTAGATAAAAAGGAAAGGTCTA 57.385 33.333 0.00 0.00 0.00 2.59
1628 3169 8.809468 AAGGAAAGGTCTAAATCCAATTACTC 57.191 34.615 0.00 0.00 34.30 2.59
1764 3306 1.278238 GTACCACGGCGAGATCAAAG 58.722 55.000 16.62 0.00 0.00 2.77
1781 3323 0.670546 AAGTCGGCATCACCTTCACG 60.671 55.000 0.00 0.00 35.61 4.35
1830 3372 1.040646 TGAAGAAGACGGAGCACAGT 58.959 50.000 0.00 0.00 0.00 3.55
1843 3385 1.239968 GCACAGTTTGGAGGCTGGAG 61.240 60.000 0.00 0.00 37.07 3.86
1919 3469 2.017049 GTGTTGGATGTGGCCTATGAC 58.983 52.381 3.32 0.00 0.00 3.06
1931 3481 3.144506 GGCCTATGACTGAATGATGTGG 58.855 50.000 0.00 0.00 0.00 4.17
1989 3539 4.890158 TCAGAACAGCTTAAGATCACCA 57.110 40.909 6.67 0.00 0.00 4.17
1990 3540 5.227569 TCAGAACAGCTTAAGATCACCAA 57.772 39.130 6.67 0.00 0.00 3.67
1991 3541 5.620206 TCAGAACAGCTTAAGATCACCAAA 58.380 37.500 6.67 0.00 0.00 3.28
1992 3542 6.240894 TCAGAACAGCTTAAGATCACCAAAT 58.759 36.000 6.67 0.00 0.00 2.32
1993 3543 6.716628 TCAGAACAGCTTAAGATCACCAAATT 59.283 34.615 6.67 0.00 0.00 1.82
1994 3544 7.025963 CAGAACAGCTTAAGATCACCAAATTC 58.974 38.462 6.67 0.00 0.00 2.17
1995 3545 5.551760 ACAGCTTAAGATCACCAAATTCG 57.448 39.130 6.67 0.00 0.00 3.34
1996 3546 5.003804 ACAGCTTAAGATCACCAAATTCGT 58.996 37.500 6.67 0.00 0.00 3.85
1997 3547 5.473504 ACAGCTTAAGATCACCAAATTCGTT 59.526 36.000 6.67 0.00 0.00 3.85
1998 3548 6.016276 ACAGCTTAAGATCACCAAATTCGTTT 60.016 34.615 6.67 0.00 0.00 3.60
1999 3549 7.174253 ACAGCTTAAGATCACCAAATTCGTTTA 59.826 33.333 6.67 0.00 0.00 2.01
2000 3550 7.481798 CAGCTTAAGATCACCAAATTCGTTTAC 59.518 37.037 6.67 0.00 0.00 2.01
2001 3551 6.464834 GCTTAAGATCACCAAATTCGTTTACG 59.535 38.462 6.67 0.00 41.45 3.18
2079 3629 5.555966 TGAATGCTTGTTGACACCAGTATA 58.444 37.500 0.00 0.00 0.00 1.47
2080 3630 6.179756 TGAATGCTTGTTGACACCAGTATAT 58.820 36.000 0.00 0.00 0.00 0.86
2081 3631 7.334858 TGAATGCTTGTTGACACCAGTATATA 58.665 34.615 0.00 0.00 0.00 0.86
2082 3632 7.279981 TGAATGCTTGTTGACACCAGTATATAC 59.720 37.037 4.60 4.60 0.00 1.47
2083 3633 6.043854 TGCTTGTTGACACCAGTATATACA 57.956 37.500 15.18 0.00 0.00 2.29
2084 3634 6.649155 TGCTTGTTGACACCAGTATATACAT 58.351 36.000 15.18 0.00 0.00 2.29
2085 3635 7.787028 TGCTTGTTGACACCAGTATATACATA 58.213 34.615 15.18 0.00 0.00 2.29
2086 3636 7.709182 TGCTTGTTGACACCAGTATATACATAC 59.291 37.037 15.18 1.71 37.83 2.39
2087 3637 7.096189 GCTTGTTGACACCAGTATATACATACG 60.096 40.741 15.18 3.69 41.70 3.06
2088 3638 6.741109 TGTTGACACCAGTATATACATACGG 58.259 40.000 15.18 11.25 41.70 4.02
2089 3639 6.321945 TGTTGACACCAGTATATACATACGGT 59.678 38.462 15.18 11.82 41.70 4.83
2094 3644 6.309436 CACCAGTATATACATACGGTGTACG 58.691 44.000 22.83 8.69 45.59 3.67
2103 3653 2.202878 CGGTGTACGGCCATCTGG 60.203 66.667 2.24 0.00 39.42 3.86
2116 3666 3.777465 CCATCTGGCAAGAACAAGATG 57.223 47.619 0.00 2.49 35.59 2.90
2117 3667 2.159282 CCATCTGGCAAGAACAAGATGC 60.159 50.000 0.00 0.00 35.59 3.91
2118 3668 2.574006 TCTGGCAAGAACAAGATGCT 57.426 45.000 0.00 0.00 39.94 3.79
2119 3669 3.701205 TCTGGCAAGAACAAGATGCTA 57.299 42.857 0.00 0.00 39.94 3.49
2137 3687 1.132643 CTACGGAGTCCAGTTCTTCGG 59.867 57.143 10.49 0.00 43.93 4.30
2182 3738 3.733443 ACTCAAACAATTTCAGGTGCC 57.267 42.857 0.00 0.00 0.00 5.01
2184 3740 3.319122 ACTCAAACAATTTCAGGTGCCTC 59.681 43.478 0.00 0.00 0.00 4.70
2192 3748 1.279496 TTCAGGTGCCTCTACAGCAT 58.721 50.000 0.00 0.00 43.29 3.79
2216 3779 0.684479 ACACTGCCGCTCCAGATAGA 60.684 55.000 7.38 0.00 36.67 1.98
2221 3784 3.023119 CTGCCGCTCCAGATAGAGATAT 58.977 50.000 0.00 0.00 35.82 1.63
2410 3984 1.153289 CATCACCCCGAGCTCCTTG 60.153 63.158 8.47 0.08 0.00 3.61
2569 4143 1.367840 GAGCACCTCAACCACGAGT 59.632 57.895 0.00 0.00 0.00 4.18
2776 4363 1.592400 CTGGCGTAGACGGGTCAGAA 61.592 60.000 3.97 0.00 41.59 3.02
2790 4849 3.390521 AGAAGATGCGGCGGTGGA 61.391 61.111 9.78 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.334989 TGTAGTCCGTGTTTATTGATACTGG 58.665 40.000 0.00 0.00 0.00 4.00
1 2 8.965172 GTATGTAGTCCGTGTTTATTGATACTG 58.035 37.037 0.00 0.00 0.00 2.74
5 6 8.910944 AGTAGTATGTAGTCCGTGTTTATTGAT 58.089 33.333 0.00 0.00 0.00 2.57
6 7 8.186163 CAGTAGTATGTAGTCCGTGTTTATTGA 58.814 37.037 0.00 0.00 0.00 2.57
7 8 7.972277 ACAGTAGTATGTAGTCCGTGTTTATTG 59.028 37.037 0.00 0.00 0.00 1.90
8 9 8.059798 ACAGTAGTATGTAGTCCGTGTTTATT 57.940 34.615 0.00 0.00 0.00 1.40
9 10 7.636150 ACAGTAGTATGTAGTCCGTGTTTAT 57.364 36.000 0.00 0.00 0.00 1.40
10 11 7.606073 TGTACAGTAGTATGTAGTCCGTGTTTA 59.394 37.037 0.00 0.00 36.36 2.01
11 12 5.972107 ACAGTAGTATGTAGTCCGTGTTT 57.028 39.130 0.00 0.00 0.00 2.83
12 13 5.939883 TGTACAGTAGTATGTAGTCCGTGTT 59.060 40.000 0.00 0.00 36.36 3.32
13 14 5.491070 TGTACAGTAGTATGTAGTCCGTGT 58.509 41.667 0.00 0.00 36.36 4.49
14 15 5.583854 ACTGTACAGTAGTATGTAGTCCGTG 59.416 44.000 26.91 0.00 40.43 4.94
15 16 5.583854 CACTGTACAGTAGTATGTAGTCCGT 59.416 44.000 27.48 0.00 40.20 4.69
16 17 5.583854 ACACTGTACAGTAGTATGTAGTCCG 59.416 44.000 27.48 12.97 40.20 4.79
17 18 6.998968 ACACTGTACAGTAGTATGTAGTCC 57.001 41.667 27.48 0.00 40.20 3.85
18 19 7.276658 ACGTACACTGTACAGTAGTATGTAGTC 59.723 40.741 33.47 21.90 39.89 2.59
19 20 7.099764 ACGTACACTGTACAGTAGTATGTAGT 58.900 38.462 33.47 25.45 39.89 2.73
20 21 7.531280 ACGTACACTGTACAGTAGTATGTAG 57.469 40.000 33.47 25.37 39.89 2.74
21 22 9.599866 AATACGTACACTGTACAGTAGTATGTA 57.400 33.333 35.61 35.61 42.64 2.29
22 23 8.498054 AATACGTACACTGTACAGTAGTATGT 57.502 34.615 34.67 34.67 41.79 2.29
25 26 8.592155 CGTAAATACGTACACTGTACAGTAGTA 58.408 37.037 27.48 24.78 44.13 1.82
26 27 7.456253 CGTAAATACGTACACTGTACAGTAGT 58.544 38.462 27.48 25.68 44.13 2.73
27 28 7.867579 CGTAAATACGTACACTGTACAGTAG 57.132 40.000 27.48 21.98 44.13 2.57
43 44 4.670347 ACCGCTCTTCTCTTCGTAAATAC 58.330 43.478 0.00 0.00 0.00 1.89
44 45 4.978083 ACCGCTCTTCTCTTCGTAAATA 57.022 40.909 0.00 0.00 0.00 1.40
45 46 3.870633 ACCGCTCTTCTCTTCGTAAAT 57.129 42.857 0.00 0.00 0.00 1.40
46 47 3.655276 AACCGCTCTTCTCTTCGTAAA 57.345 42.857 0.00 0.00 0.00 2.01
47 48 3.503363 TGTAACCGCTCTTCTCTTCGTAA 59.497 43.478 0.00 0.00 0.00 3.18
48 49 3.076621 TGTAACCGCTCTTCTCTTCGTA 58.923 45.455 0.00 0.00 0.00 3.43
49 50 1.884579 TGTAACCGCTCTTCTCTTCGT 59.115 47.619 0.00 0.00 0.00 3.85
50 51 2.251893 GTGTAACCGCTCTTCTCTTCG 58.748 52.381 0.00 0.00 0.00 3.79
64 65 6.164176 AGTTAGCTCTTGTGTATGGTGTAAC 58.836 40.000 0.00 0.00 0.00 2.50
65 66 6.354794 AGTTAGCTCTTGTGTATGGTGTAA 57.645 37.500 0.00 0.00 0.00 2.41
66 67 5.995565 AGTTAGCTCTTGTGTATGGTGTA 57.004 39.130 0.00 0.00 0.00 2.90
67 68 4.891992 AGTTAGCTCTTGTGTATGGTGT 57.108 40.909 0.00 0.00 0.00 4.16
68 69 6.183360 GCTTAAGTTAGCTCTTGTGTATGGTG 60.183 42.308 4.02 0.00 38.15 4.17
69 70 5.875359 GCTTAAGTTAGCTCTTGTGTATGGT 59.125 40.000 4.02 0.00 38.15 3.55
70 71 5.874810 TGCTTAAGTTAGCTCTTGTGTATGG 59.125 40.000 4.02 0.00 41.76 2.74
71 72 6.591834 AGTGCTTAAGTTAGCTCTTGTGTATG 59.408 38.462 4.02 0.00 40.91 2.39
72 73 6.702329 AGTGCTTAAGTTAGCTCTTGTGTAT 58.298 36.000 4.02 0.00 40.91 2.29
73 74 6.097915 AGTGCTTAAGTTAGCTCTTGTGTA 57.902 37.500 4.02 0.00 40.91 2.90
74 75 4.962155 AGTGCTTAAGTTAGCTCTTGTGT 58.038 39.130 4.02 0.00 40.91 3.72
75 76 4.090642 CGAGTGCTTAAGTTAGCTCTTGTG 59.909 45.833 4.02 0.00 43.02 3.33
76 77 4.022242 TCGAGTGCTTAAGTTAGCTCTTGT 60.022 41.667 4.02 0.00 43.02 3.16
77 78 4.486090 TCGAGTGCTTAAGTTAGCTCTTG 58.514 43.478 4.02 0.00 43.02 3.02
78 79 4.785511 TCGAGTGCTTAAGTTAGCTCTT 57.214 40.909 4.02 0.00 43.02 2.85
79 80 4.993029 ATCGAGTGCTTAAGTTAGCTCT 57.007 40.909 4.02 0.00 44.94 4.09
80 81 5.103000 TCAATCGAGTGCTTAAGTTAGCTC 58.897 41.667 8.24 6.11 41.76 4.09
81 82 5.073311 TCAATCGAGTGCTTAAGTTAGCT 57.927 39.130 8.24 0.00 41.76 3.32
82 83 5.975410 ATCAATCGAGTGCTTAAGTTAGC 57.025 39.130 8.24 0.00 41.59 3.09
83 84 8.660373 AGAAAATCAATCGAGTGCTTAAGTTAG 58.340 33.333 8.24 0.00 0.00 2.34
84 85 8.547967 AGAAAATCAATCGAGTGCTTAAGTTA 57.452 30.769 8.24 0.00 0.00 2.24
85 86 7.440523 AGAAAATCAATCGAGTGCTTAAGTT 57.559 32.000 8.24 0.00 0.00 2.66
86 87 7.440523 AAGAAAATCAATCGAGTGCTTAAGT 57.559 32.000 8.24 0.00 0.00 2.24
87 88 7.272084 CCAAAGAAAATCAATCGAGTGCTTAAG 59.728 37.037 8.24 0.00 0.00 1.85
88 89 7.040755 TCCAAAGAAAATCAATCGAGTGCTTAA 60.041 33.333 8.24 0.00 0.00 1.85
89 90 6.429692 TCCAAAGAAAATCAATCGAGTGCTTA 59.570 34.615 8.24 0.00 0.00 3.09
90 91 5.241506 TCCAAAGAAAATCAATCGAGTGCTT 59.758 36.000 8.24 1.34 0.00 3.91
91 92 4.761739 TCCAAAGAAAATCAATCGAGTGCT 59.238 37.500 8.24 0.00 0.00 4.40
92 93 5.046910 TCCAAAGAAAATCAATCGAGTGC 57.953 39.130 8.24 0.00 0.00 4.40
93 94 6.672147 ACTTCCAAAGAAAATCAATCGAGTG 58.328 36.000 6.51 6.51 0.00 3.51
94 95 6.884280 ACTTCCAAAGAAAATCAATCGAGT 57.116 33.333 0.00 0.00 0.00 4.18
95 96 6.583806 CCAACTTCCAAAGAAAATCAATCGAG 59.416 38.462 0.00 0.00 0.00 4.04
96 97 6.446318 CCAACTTCCAAAGAAAATCAATCGA 58.554 36.000 0.00 0.00 0.00 3.59
97 98 5.119125 GCCAACTTCCAAAGAAAATCAATCG 59.881 40.000 0.00 0.00 0.00 3.34
98 99 6.226052 AGCCAACTTCCAAAGAAAATCAATC 58.774 36.000 0.00 0.00 0.00 2.67
99 100 6.178607 AGCCAACTTCCAAAGAAAATCAAT 57.821 33.333 0.00 0.00 0.00 2.57
100 101 5.453198 GGAGCCAACTTCCAAAGAAAATCAA 60.453 40.000 0.00 0.00 0.00 2.57
101 102 4.039124 GGAGCCAACTTCCAAAGAAAATCA 59.961 41.667 0.00 0.00 0.00 2.57
102 103 4.560128 GGAGCCAACTTCCAAAGAAAATC 58.440 43.478 0.00 0.00 0.00 2.17
103 104 3.324846 GGGAGCCAACTTCCAAAGAAAAT 59.675 43.478 0.00 0.00 41.94 1.82
104 105 2.698274 GGGAGCCAACTTCCAAAGAAAA 59.302 45.455 0.00 0.00 41.94 2.29
105 106 2.316108 GGGAGCCAACTTCCAAAGAAA 58.684 47.619 0.00 0.00 41.94 2.52
106 107 1.817740 CGGGAGCCAACTTCCAAAGAA 60.818 52.381 0.00 0.00 42.59 2.52
107 108 0.250727 CGGGAGCCAACTTCCAAAGA 60.251 55.000 0.00 0.00 42.59 2.52
108 109 2.257353 CGGGAGCCAACTTCCAAAG 58.743 57.895 0.00 0.00 42.59 2.77
109 110 4.492604 CGGGAGCCAACTTCCAAA 57.507 55.556 0.00 0.00 42.59 3.28
121 122 2.501610 GGTTCCTAGCTGCGGGAG 59.498 66.667 14.72 5.20 32.80 4.30
122 123 3.458163 CGGTTCCTAGCTGCGGGA 61.458 66.667 12.06 12.06 0.00 5.14
123 124 3.014085 TTCGGTTCCTAGCTGCGGG 62.014 63.158 0.00 8.09 0.00 6.13
124 125 1.810030 GTTCGGTTCCTAGCTGCGG 60.810 63.158 0.00 0.00 0.00 5.69
125 126 1.810030 GGTTCGGTTCCTAGCTGCG 60.810 63.158 0.00 0.00 0.00 5.18
126 127 0.741221 CTGGTTCGGTTCCTAGCTGC 60.741 60.000 0.00 0.00 0.00 5.25
127 128 0.741221 GCTGGTTCGGTTCCTAGCTG 60.741 60.000 0.00 0.00 0.00 4.24
128 129 0.905337 AGCTGGTTCGGTTCCTAGCT 60.905 55.000 0.00 0.00 35.92 3.32
129 130 0.741221 CAGCTGGTTCGGTTCCTAGC 60.741 60.000 5.57 0.00 33.03 3.42
130 131 0.108138 CCAGCTGGTTCGGTTCCTAG 60.108 60.000 25.53 0.00 0.00 3.02
131 132 0.543410 TCCAGCTGGTTCGGTTCCTA 60.543 55.000 31.58 5.96 36.34 2.94
132 133 1.841556 TCCAGCTGGTTCGGTTCCT 60.842 57.895 31.58 0.00 36.34 3.36
133 134 1.671379 GTCCAGCTGGTTCGGTTCC 60.671 63.158 31.58 7.52 36.34 3.62
134 135 0.951040 CTGTCCAGCTGGTTCGGTTC 60.951 60.000 31.58 14.27 36.34 3.62
135 136 1.071471 CTGTCCAGCTGGTTCGGTT 59.929 57.895 31.58 0.00 36.34 4.44
136 137 2.743718 CTGTCCAGCTGGTTCGGT 59.256 61.111 31.58 0.00 36.34 4.69
146 147 2.588596 TGCGTGTGTGCTGTCCAG 60.589 61.111 0.00 0.00 35.36 3.86
147 148 2.588596 CTGCGTGTGTGCTGTCCA 60.589 61.111 0.00 0.00 35.36 4.02
148 149 4.017877 GCTGCGTGTGTGCTGTCC 62.018 66.667 0.00 0.00 36.33 4.02
149 150 1.621301 CTAGCTGCGTGTGTGCTGTC 61.621 60.000 0.00 0.00 37.62 3.51
150 151 1.665916 CTAGCTGCGTGTGTGCTGT 60.666 57.895 0.00 0.00 37.62 4.40
151 152 0.388520 TACTAGCTGCGTGTGTGCTG 60.389 55.000 0.00 0.00 37.62 4.41
152 153 0.109086 CTACTAGCTGCGTGTGTGCT 60.109 55.000 0.00 0.00 40.43 4.40
153 154 0.388649 ACTACTAGCTGCGTGTGTGC 60.389 55.000 0.00 0.00 0.00 4.57
154 155 1.986378 GAACTACTAGCTGCGTGTGTG 59.014 52.381 0.00 6.24 0.00 3.82
155 156 1.401148 CGAACTACTAGCTGCGTGTGT 60.401 52.381 0.00 3.69 0.00 3.72
156 157 1.260206 CGAACTACTAGCTGCGTGTG 58.740 55.000 0.00 0.00 0.00 3.82
157 158 0.456312 GCGAACTACTAGCTGCGTGT 60.456 55.000 0.00 0.00 0.00 4.49
158 159 0.179161 AGCGAACTACTAGCTGCGTG 60.179 55.000 0.00 0.00 40.07 5.34
159 160 1.376543 TAGCGAACTACTAGCTGCGT 58.623 50.000 0.00 0.00 41.80 5.24
160 161 2.690173 ATAGCGAACTACTAGCTGCG 57.310 50.000 0.00 0.00 41.80 5.18
161 162 4.752661 AGTATAGCGAACTACTAGCTGC 57.247 45.455 0.00 0.00 41.80 5.25
162 163 6.308675 GCTAAGTATAGCGAACTACTAGCTG 58.691 44.000 0.00 0.00 44.70 4.24
163 164 6.484818 GCTAAGTATAGCGAACTACTAGCT 57.515 41.667 0.00 0.00 44.70 3.32
176 177 6.292703 GGTTTGTTGTATGCGGCTAAGTATAG 60.293 42.308 0.00 0.00 0.00 1.31
177 178 5.524646 GGTTTGTTGTATGCGGCTAAGTATA 59.475 40.000 0.00 0.00 0.00 1.47
178 179 4.334481 GGTTTGTTGTATGCGGCTAAGTAT 59.666 41.667 0.00 0.00 0.00 2.12
179 180 3.685756 GGTTTGTTGTATGCGGCTAAGTA 59.314 43.478 0.00 0.00 0.00 2.24
180 181 2.486592 GGTTTGTTGTATGCGGCTAAGT 59.513 45.455 0.00 0.00 0.00 2.24
181 182 2.486203 TGGTTTGTTGTATGCGGCTAAG 59.514 45.455 0.00 0.00 0.00 2.18
182 183 2.505405 TGGTTTGTTGTATGCGGCTAA 58.495 42.857 0.00 0.00 0.00 3.09
183 184 2.186532 TGGTTTGTTGTATGCGGCTA 57.813 45.000 0.00 0.00 0.00 3.93
184 185 1.269448 CTTGGTTTGTTGTATGCGGCT 59.731 47.619 0.00 0.00 0.00 5.52
185 186 1.696988 CTTGGTTTGTTGTATGCGGC 58.303 50.000 0.00 0.00 0.00 6.53
186 187 1.668628 GGCTTGGTTTGTTGTATGCGG 60.669 52.381 0.00 0.00 0.00 5.69
187 188 1.696988 GGCTTGGTTTGTTGTATGCG 58.303 50.000 0.00 0.00 0.00 4.73
188 189 1.668628 CCGGCTTGGTTTGTTGTATGC 60.669 52.381 0.00 0.00 0.00 3.14
189 190 1.668628 GCCGGCTTGGTTTGTTGTATG 60.669 52.381 22.15 0.00 41.21 2.39
190 191 0.601057 GCCGGCTTGGTTTGTTGTAT 59.399 50.000 22.15 0.00 41.21 2.29
191 192 1.457009 GGCCGGCTTGGTTTGTTGTA 61.457 55.000 28.56 0.00 41.21 2.41
192 193 2.791868 GGCCGGCTTGGTTTGTTGT 61.792 57.895 28.56 0.00 41.21 3.32
193 194 2.028925 GGCCGGCTTGGTTTGTTG 59.971 61.111 28.56 0.00 41.21 3.33
194 195 3.601685 CGGCCGGCTTGGTTTGTT 61.602 61.111 28.56 0.00 41.21 2.83
200 201 2.958578 ATAATGTCCGGCCGGCTTGG 62.959 60.000 39.89 27.24 42.50 3.61
201 202 1.101049 AATAATGTCCGGCCGGCTTG 61.101 55.000 39.89 16.75 34.68 4.01
202 203 0.470766 TAATAATGTCCGGCCGGCTT 59.529 50.000 39.89 30.26 34.68 4.35
203 204 0.034896 CTAATAATGTCCGGCCGGCT 59.965 55.000 39.89 24.05 34.68 5.52
204 205 1.574702 GCTAATAATGTCCGGCCGGC 61.575 60.000 39.89 31.83 34.68 6.13
205 206 0.250124 TGCTAATAATGTCCGGCCGG 60.250 55.000 39.13 39.13 0.00 6.13
206 207 0.865769 GTGCTAATAATGTCCGGCCG 59.134 55.000 21.04 21.04 0.00 6.13
207 208 0.865769 CGTGCTAATAATGTCCGGCC 59.134 55.000 0.00 0.00 0.00 6.13
208 209 1.578583 ACGTGCTAATAATGTCCGGC 58.421 50.000 0.00 0.00 0.00 6.13
209 210 3.734231 CACTACGTGCTAATAATGTCCGG 59.266 47.826 0.00 0.00 0.00 5.14
210 211 4.948864 CACTACGTGCTAATAATGTCCG 57.051 45.455 0.00 0.00 0.00 4.79
223 224 2.287103 TCATAGACGCTAGCACTACGTG 59.713 50.000 16.45 12.71 40.69 4.49
224 225 2.558378 TCATAGACGCTAGCACTACGT 58.442 47.619 16.45 3.44 43.83 3.57
225 226 3.604065 TTCATAGACGCTAGCACTACG 57.396 47.619 16.45 10.20 0.00 3.51
226 227 6.830114 AAAATTCATAGACGCTAGCACTAC 57.170 37.500 16.45 2.52 0.00 2.73
248 249 6.726379 TCCCTGATGTGGTATGTGATAAAAA 58.274 36.000 0.00 0.00 0.00 1.94
249 250 6.320434 TCCCTGATGTGGTATGTGATAAAA 57.680 37.500 0.00 0.00 0.00 1.52
250 251 5.966853 TCCCTGATGTGGTATGTGATAAA 57.033 39.130 0.00 0.00 0.00 1.40
251 252 7.625498 TTATCCCTGATGTGGTATGTGATAA 57.375 36.000 0.00 0.00 0.00 1.75
252 253 7.625498 TTTATCCCTGATGTGGTATGTGATA 57.375 36.000 0.00 0.00 0.00 2.15
253 254 6.514012 TTTATCCCTGATGTGGTATGTGAT 57.486 37.500 0.00 0.00 0.00 3.06
254 255 5.966853 TTTATCCCTGATGTGGTATGTGA 57.033 39.130 0.00 0.00 0.00 3.58
255 256 6.039717 CCTTTTTATCCCTGATGTGGTATGTG 59.960 42.308 0.00 0.00 0.00 3.21
256 257 6.129179 CCTTTTTATCCCTGATGTGGTATGT 58.871 40.000 0.00 0.00 0.00 2.29
257 258 6.129179 ACCTTTTTATCCCTGATGTGGTATG 58.871 40.000 0.00 0.00 0.00 2.39
258 259 6.160459 AGACCTTTTTATCCCTGATGTGGTAT 59.840 38.462 0.00 0.00 0.00 2.73
259 260 5.491078 AGACCTTTTTATCCCTGATGTGGTA 59.509 40.000 0.00 0.00 0.00 3.25
260 261 4.292306 AGACCTTTTTATCCCTGATGTGGT 59.708 41.667 0.00 0.00 0.00 4.16
261 262 4.860022 AGACCTTTTTATCCCTGATGTGG 58.140 43.478 0.00 0.00 0.00 4.17
262 263 6.840780 AAAGACCTTTTTATCCCTGATGTG 57.159 37.500 0.00 0.00 0.00 3.21
263 264 7.466804 TGTAAAGACCTTTTTATCCCTGATGT 58.533 34.615 0.00 0.00 34.23 3.06
264 265 7.938140 TGTAAAGACCTTTTTATCCCTGATG 57.062 36.000 0.00 0.00 34.23 3.07
266 267 9.627123 CATATGTAAAGACCTTTTTATCCCTGA 57.373 33.333 0.00 0.00 34.23 3.86
267 268 9.408648 ACATATGTAAAGACCTTTTTATCCCTG 57.591 33.333 6.56 0.12 34.23 4.45
268 269 9.628500 GACATATGTAAAGACCTTTTTATCCCT 57.372 33.333 8.71 0.00 34.23 4.20
269 270 9.403583 TGACATATGTAAAGACCTTTTTATCCC 57.596 33.333 8.71 0.00 34.23 3.85
278 279 9.174166 GGTGTTAATTGACATATGTAAAGACCT 57.826 33.333 8.71 0.00 0.00 3.85
279 280 9.174166 AGGTGTTAATTGACATATGTAAAGACC 57.826 33.333 8.71 14.50 0.00 3.85
286 287 8.466798 GGCTTAAAGGTGTTAATTGACATATGT 58.533 33.333 8.43 8.43 0.00 2.29
287 288 8.686334 AGGCTTAAAGGTGTTAATTGACATATG 58.314 33.333 6.31 0.00 0.00 1.78
288 289 8.823220 AGGCTTAAAGGTGTTAATTGACATAT 57.177 30.769 6.31 0.00 0.00 1.78
289 290 8.644374 AAGGCTTAAAGGTGTTAATTGACATA 57.356 30.769 6.31 0.00 0.00 2.29
290 291 7.539034 AAGGCTTAAAGGTGTTAATTGACAT 57.461 32.000 6.31 0.00 0.00 3.06
291 292 6.969993 AAGGCTTAAAGGTGTTAATTGACA 57.030 33.333 0.00 0.00 0.00 3.58
292 293 9.752961 TTTTAAGGCTTAAAGGTGTTAATTGAC 57.247 29.630 26.22 0.00 36.56 3.18
298 299 8.938906 CGTCTATTTTAAGGCTTAAAGGTGTTA 58.061 33.333 26.22 14.88 36.56 2.41
299 300 7.662669 TCGTCTATTTTAAGGCTTAAAGGTGTT 59.337 33.333 26.22 15.24 36.56 3.32
300 301 7.163441 TCGTCTATTTTAAGGCTTAAAGGTGT 58.837 34.615 26.22 17.83 36.56 4.16
301 302 7.605410 TCGTCTATTTTAAGGCTTAAAGGTG 57.395 36.000 26.22 20.15 36.56 4.00
302 303 8.625786 TTTCGTCTATTTTAAGGCTTAAAGGT 57.374 30.769 26.22 21.60 36.56 3.50
303 304 8.727910 ACTTTCGTCTATTTTAAGGCTTAAAGG 58.272 33.333 26.22 20.60 36.56 3.11
304 305 9.543018 CACTTTCGTCTATTTTAAGGCTTAAAG 57.457 33.333 26.22 18.02 36.56 1.85
305 306 9.059260 ACACTTTCGTCTATTTTAAGGCTTAAA 57.941 29.630 24.62 24.62 33.56 1.52
306 307 8.611654 ACACTTTCGTCTATTTTAAGGCTTAA 57.388 30.769 15.49 15.49 0.00 1.85
307 308 8.611654 AACACTTTCGTCTATTTTAAGGCTTA 57.388 30.769 2.04 2.04 0.00 3.09
308 309 7.506328 AACACTTTCGTCTATTTTAAGGCTT 57.494 32.000 4.58 4.58 0.00 4.35
309 310 8.788325 ATAACACTTTCGTCTATTTTAAGGCT 57.212 30.769 0.00 0.00 0.00 4.58
315 316 9.836076 GCCTTTTATAACACTTTCGTCTATTTT 57.164 29.630 0.00 0.00 0.00 1.82
316 317 9.005777 TGCCTTTTATAACACTTTCGTCTATTT 57.994 29.630 0.00 0.00 0.00 1.40
317 318 8.556213 TGCCTTTTATAACACTTTCGTCTATT 57.444 30.769 0.00 0.00 0.00 1.73
318 319 8.732746 ATGCCTTTTATAACACTTTCGTCTAT 57.267 30.769 0.00 0.00 0.00 1.98
319 320 9.656040 TTATGCCTTTTATAACACTTTCGTCTA 57.344 29.630 0.00 0.00 0.00 2.59
320 321 8.556213 TTATGCCTTTTATAACACTTTCGTCT 57.444 30.769 0.00 0.00 0.00 4.18
321 322 9.615295 TTTTATGCCTTTTATAACACTTTCGTC 57.385 29.630 0.00 0.00 0.00 4.20
334 335 9.834628 CAACGAGTCTAAATTTTATGCCTTTTA 57.165 29.630 0.00 0.00 0.00 1.52
335 336 8.357402 ACAACGAGTCTAAATTTTATGCCTTTT 58.643 29.630 0.00 0.00 0.00 2.27
336 337 7.882179 ACAACGAGTCTAAATTTTATGCCTTT 58.118 30.769 0.00 0.00 0.00 3.11
337 338 7.448748 ACAACGAGTCTAAATTTTATGCCTT 57.551 32.000 0.00 0.00 0.00 4.35
338 339 7.448748 AACAACGAGTCTAAATTTTATGCCT 57.551 32.000 0.00 0.00 0.00 4.75
385 386 9.717942 CAATTTTATTTCCCTATTTGACACCAA 57.282 29.630 0.00 0.00 0.00 3.67
386 387 9.094578 TCAATTTTATTTCCCTATTTGACACCA 57.905 29.630 0.00 0.00 0.00 4.17
387 388 9.936759 TTCAATTTTATTTCCCTATTTGACACC 57.063 29.630 0.00 0.00 0.00 4.16
394 395 9.927668 CACTGTGTTCAATTTTATTTCCCTATT 57.072 29.630 0.00 0.00 0.00 1.73
395 396 9.088987 ACACTGTGTTCAATTTTATTTCCCTAT 57.911 29.630 7.80 0.00 0.00 2.57
396 397 8.472007 ACACTGTGTTCAATTTTATTTCCCTA 57.528 30.769 7.80 0.00 0.00 3.53
397 398 7.360113 ACACTGTGTTCAATTTTATTTCCCT 57.640 32.000 7.80 0.00 0.00 4.20
398 399 9.535878 TTAACACTGTGTTCAATTTTATTTCCC 57.464 29.630 27.73 0.00 40.22 3.97
409 410 9.959749 GAATTCCTTATTTAACACTGTGTTCAA 57.040 29.630 27.73 23.04 40.22 2.69
410 411 9.349713 AGAATTCCTTATTTAACACTGTGTTCA 57.650 29.630 27.73 15.92 40.22 3.18
428 429 9.326413 CCACATACGTATTTAGAAAGAATTCCT 57.674 33.333 5.03 0.00 36.12 3.36
429 430 9.106070 ACCACATACGTATTTAGAAAGAATTCC 57.894 33.333 5.03 0.00 36.12 3.01
430 431 9.916397 CACCACATACGTATTTAGAAAGAATTC 57.084 33.333 5.03 0.00 35.70 2.17
431 432 9.444600 ACACCACATACGTATTTAGAAAGAATT 57.555 29.630 5.03 0.00 0.00 2.17
432 433 9.095065 GACACCACATACGTATTTAGAAAGAAT 57.905 33.333 5.03 0.00 0.00 2.40
433 434 7.274033 CGACACCACATACGTATTTAGAAAGAA 59.726 37.037 5.03 0.00 0.00 2.52
434 435 6.748658 CGACACCACATACGTATTTAGAAAGA 59.251 38.462 5.03 0.00 0.00 2.52
435 436 6.748658 TCGACACCACATACGTATTTAGAAAG 59.251 38.462 5.03 0.00 0.00 2.62
436 437 6.619744 TCGACACCACATACGTATTTAGAAA 58.380 36.000 5.03 0.00 0.00 2.52
437 438 6.093909 TCTCGACACCACATACGTATTTAGAA 59.906 38.462 5.03 0.00 0.00 2.10
438 439 5.585844 TCTCGACACCACATACGTATTTAGA 59.414 40.000 5.03 0.00 0.00 2.10
439 440 5.680229 GTCTCGACACCACATACGTATTTAG 59.320 44.000 5.03 0.00 0.00 1.85
440 441 5.449041 GGTCTCGACACCACATACGTATTTA 60.449 44.000 5.03 0.00 36.32 1.40
441 442 4.418392 GTCTCGACACCACATACGTATTT 58.582 43.478 5.03 0.00 0.00 1.40
442 443 3.181493 GGTCTCGACACCACATACGTATT 60.181 47.826 5.03 0.00 36.32 1.89
443 444 2.357009 GGTCTCGACACCACATACGTAT 59.643 50.000 4.81 1.14 36.32 3.06
444 445 1.739466 GGTCTCGACACCACATACGTA 59.261 52.381 4.81 0.00 36.32 3.57
445 446 0.524862 GGTCTCGACACCACATACGT 59.475 55.000 4.81 0.00 36.32 3.57
446 447 0.524414 TGGTCTCGACACCACATACG 59.476 55.000 8.65 0.00 41.84 3.06
447 448 2.029290 ACTTGGTCTCGACACCACATAC 60.029 50.000 12.55 0.00 46.64 2.39
455 456 1.007734 GCACGACTTGGTCTCGACA 60.008 57.895 0.00 0.00 35.08 4.35
470 471 3.099267 AGATCCATAGCAACGTAGCAC 57.901 47.619 0.00 0.00 36.85 4.40
522 523 1.713297 AGGGTCACGTACTTGGAGTT 58.287 50.000 0.00 0.00 0.00 3.01
523 524 2.592102 TAGGGTCACGTACTTGGAGT 57.408 50.000 0.00 0.00 0.00 3.85
524 525 3.947910 TTTAGGGTCACGTACTTGGAG 57.052 47.619 0.00 0.00 0.00 3.86
525 526 4.686191 TTTTTAGGGTCACGTACTTGGA 57.314 40.909 0.00 0.00 0.00 3.53
546 547 5.434408 AGGAGAAACGTACTTGGAGTTTTT 58.566 37.500 0.00 0.00 38.09 1.94
547 548 5.032327 AGGAGAAACGTACTTGGAGTTTT 57.968 39.130 0.00 0.00 38.09 2.43
548 549 4.684484 AGGAGAAACGTACTTGGAGTTT 57.316 40.909 0.00 0.00 40.32 2.66
595 596 3.917760 GCCTCCGCTGACGCCTAT 61.918 66.667 0.00 0.00 38.22 2.57
607 608 1.448013 GAGTGTTGCTACGGCCTCC 60.448 63.158 0.00 0.00 37.74 4.30
637 638 1.512310 CTGACGTCGACCGCTTCTC 60.512 63.158 10.58 0.11 41.42 2.87
945 2238 2.440430 CTTCTCCCTCTCCCGCGA 60.440 66.667 8.23 0.00 0.00 5.87
948 2241 2.961531 TATCTCTTCTCCCTCTCCCG 57.038 55.000 0.00 0.00 0.00 5.14
958 2251 6.418101 TGCAAAGCTAACCAATATCTCTTCT 58.582 36.000 0.00 0.00 0.00 2.85
990 2286 2.382746 GCGCGACATTGCTCTGTCA 61.383 57.895 12.10 0.00 44.69 3.58
1003 2305 4.116328 CTCCAGAAGACCGCGCGA 62.116 66.667 34.63 6.62 0.00 5.87
1080 2387 0.795085 CTGCTCTTCTGCAAACTCCG 59.205 55.000 0.00 0.00 42.83 4.63
1081 2388 0.520847 GCTGCTCTTCTGCAAACTCC 59.479 55.000 0.00 0.00 42.83 3.85
1082 2389 0.520847 GGCTGCTCTTCTGCAAACTC 59.479 55.000 0.00 0.00 42.83 3.01
1083 2390 0.179009 TGGCTGCTCTTCTGCAAACT 60.179 50.000 0.00 0.00 42.83 2.66
1084 2391 0.039708 GTGGCTGCTCTTCTGCAAAC 60.040 55.000 0.00 0.00 42.83 2.93
1085 2392 1.174712 GGTGGCTGCTCTTCTGCAAA 61.175 55.000 0.00 0.00 42.83 3.68
1086 2393 1.601759 GGTGGCTGCTCTTCTGCAA 60.602 57.895 0.00 0.00 42.83 4.08
1095 2402 4.935495 CGTGTGGTGGTGGCTGCT 62.935 66.667 0.00 0.00 0.00 4.24
1097 2404 3.279116 CACGTGTGGTGGTGGCTG 61.279 66.667 7.58 0.00 43.16 4.85
1107 2414 0.937304 CCAGACCAAGAACACGTGTG 59.063 55.000 24.16 11.84 0.00 3.82
1108 2415 0.814010 GCCAGACCAAGAACACGTGT 60.814 55.000 17.22 17.22 0.00 4.49
1122 2435 1.552337 AGAGAGCAAATCGAAGCCAGA 59.448 47.619 0.00 0.00 0.00 3.86
1123 2436 2.021355 AGAGAGCAAATCGAAGCCAG 57.979 50.000 0.00 0.00 0.00 4.85
1141 2454 3.902881 ATCCAAGCCAGACACTAGAAG 57.097 47.619 0.00 0.00 0.00 2.85
1146 2461 2.575279 AGATGAATCCAAGCCAGACACT 59.425 45.455 0.00 0.00 0.00 3.55
1151 2466 7.286316 AGGTAAAATTAGATGAATCCAAGCCAG 59.714 37.037 0.00 0.00 0.00 4.85
1152 2467 7.125391 AGGTAAAATTAGATGAATCCAAGCCA 58.875 34.615 0.00 0.00 0.00 4.75
1157 2472 8.727149 AGATGGAGGTAAAATTAGATGAATCCA 58.273 33.333 0.00 0.00 37.50 3.41
1168 2490 4.689345 GCGCGTATAGATGGAGGTAAAATT 59.311 41.667 8.43 0.00 0.00 1.82
1177 2499 0.538746 TCCCTGCGCGTATAGATGGA 60.539 55.000 8.43 4.70 0.00 3.41
1179 2501 1.269723 TCTTCCCTGCGCGTATAGATG 59.730 52.381 8.43 5.63 0.00 2.90
1180 2502 1.617322 TCTTCCCTGCGCGTATAGAT 58.383 50.000 8.43 0.00 0.00 1.98
1289 2657 0.110486 TGAAAGTCAAGGGTGGAGCC 59.890 55.000 0.00 0.00 0.00 4.70
1298 2670 4.641396 TGGTAGACATGGTGAAAGTCAAG 58.359 43.478 0.00 0.00 34.80 3.02
1306 2678 2.092968 GGATTGCTGGTAGACATGGTGA 60.093 50.000 0.00 0.00 0.00 4.02
1307 2679 2.292267 GGATTGCTGGTAGACATGGTG 58.708 52.381 0.00 0.00 0.00 4.17
1310 2682 4.965814 AGTATGGATTGCTGGTAGACATG 58.034 43.478 0.00 0.00 0.00 3.21
1311 2683 6.498303 TCATAGTATGGATTGCTGGTAGACAT 59.502 38.462 10.26 0.00 0.00 3.06
1316 2690 7.673926 TCATAGTCATAGTATGGATTGCTGGTA 59.326 37.037 10.26 0.00 33.41 3.25
1342 2722 3.374058 CGCTGGTTCATTTAGGAAATCGT 59.626 43.478 0.00 0.00 0.00 3.73
1421 2951 0.820226 CAGCGGAGGAGTTGATCTGA 59.180 55.000 0.00 0.00 0.00 3.27
1545 3075 0.256752 ATGGTGATGCTTGGCAGCTA 59.743 50.000 9.11 0.00 45.80 3.32
1556 3086 1.333931 GTGCTGATGCTGATGGTGATG 59.666 52.381 0.00 0.00 40.48 3.07
1557 3087 1.064979 TGTGCTGATGCTGATGGTGAT 60.065 47.619 0.00 0.00 40.48 3.06
1558 3088 0.325602 TGTGCTGATGCTGATGGTGA 59.674 50.000 0.00 0.00 40.48 4.02
1559 3089 1.389555 ATGTGCTGATGCTGATGGTG 58.610 50.000 0.00 0.00 40.48 4.17
1560 3090 2.947652 GTTATGTGCTGATGCTGATGGT 59.052 45.455 0.00 0.00 40.48 3.55
1561 3091 3.211865 AGTTATGTGCTGATGCTGATGG 58.788 45.455 0.00 0.00 40.48 3.51
1764 3306 2.100631 CCGTGAAGGTGATGCCGAC 61.101 63.158 0.00 0.00 43.70 4.79
1781 3323 2.125952 GCATCAACCTTTGCGGCC 60.126 61.111 0.00 0.00 35.61 6.13
1830 3372 2.416107 CTGTGCCTCCAGCCTCCAAA 62.416 60.000 0.00 0.00 42.71 3.28
1843 3385 2.180131 CTGCTCACGAAAGCTGTGCC 62.180 60.000 13.39 0.00 42.94 5.01
1919 3469 2.422479 CACTTGGAGCCACATCATTCAG 59.578 50.000 0.00 0.00 0.00 3.02
1931 3481 1.813513 ACAGCATACACACTTGGAGC 58.186 50.000 0.00 0.00 0.00 4.70
1967 3517 5.426689 TGGTGATCTTAAGCTGTTCTGAT 57.573 39.130 0.00 0.00 0.00 2.90
1999 3549 9.233232 GTGTTGTTTCAAAAGAATCTTAATCGT 57.767 29.630 0.00 0.00 0.00 3.73
2000 3550 9.232082 TGTGTTGTTTCAAAAGAATCTTAATCG 57.768 29.630 0.00 0.00 0.00 3.34
2021 3571 3.441222 TCGACACGGAGTATGTATGTGTT 59.559 43.478 0.00 0.00 43.28 3.32
2022 3572 3.011818 TCGACACGGAGTATGTATGTGT 58.988 45.455 0.00 0.00 45.68 3.72
2023 3573 3.685836 TCGACACGGAGTATGTATGTG 57.314 47.619 0.00 0.00 41.61 3.21
2079 3629 1.401761 TGGCCGTACACCGTATGTAT 58.598 50.000 0.00 0.00 45.59 2.29
2080 3630 1.337703 GATGGCCGTACACCGTATGTA 59.662 52.381 0.00 0.00 43.19 2.29
2081 3631 0.103572 GATGGCCGTACACCGTATGT 59.896 55.000 0.00 0.00 46.06 2.29
2082 3632 0.387929 AGATGGCCGTACACCGTATG 59.612 55.000 0.00 0.00 33.66 2.39
2083 3633 0.387929 CAGATGGCCGTACACCGTAT 59.612 55.000 0.00 0.00 33.66 3.06
2084 3634 1.669049 CCAGATGGCCGTACACCGTA 61.669 60.000 0.00 0.00 33.66 4.02
2085 3635 2.577059 CAGATGGCCGTACACCGT 59.423 61.111 0.00 0.00 33.66 4.83
2086 3636 2.202878 CCAGATGGCCGTACACCG 60.203 66.667 0.00 0.00 0.00 4.94
2096 3646 2.159282 GCATCTTGTTCTTGCCAGATGG 60.159 50.000 9.46 0.00 35.17 3.51
2097 3647 2.753452 AGCATCTTGTTCTTGCCAGATG 59.247 45.455 4.02 4.02 37.07 2.90
2098 3648 3.083122 AGCATCTTGTTCTTGCCAGAT 57.917 42.857 0.00 0.00 37.07 2.90
2099 3649 2.574006 AGCATCTTGTTCTTGCCAGA 57.426 45.000 0.00 0.00 37.07 3.86
2100 3650 2.094894 CGTAGCATCTTGTTCTTGCCAG 59.905 50.000 0.00 0.00 37.07 4.85
2101 3651 2.076100 CGTAGCATCTTGTTCTTGCCA 58.924 47.619 0.00 0.00 37.07 4.92
2102 3652 1.398390 CCGTAGCATCTTGTTCTTGCC 59.602 52.381 0.00 0.00 37.07 4.52
2103 3653 2.346803 TCCGTAGCATCTTGTTCTTGC 58.653 47.619 0.00 0.00 36.63 4.01
2104 3654 3.589988 ACTCCGTAGCATCTTGTTCTTG 58.410 45.455 0.00 0.00 0.00 3.02
2105 3655 3.368531 GGACTCCGTAGCATCTTGTTCTT 60.369 47.826 0.00 0.00 0.00 2.52
2106 3656 2.166664 GGACTCCGTAGCATCTTGTTCT 59.833 50.000 0.00 0.00 0.00 3.01
2107 3657 2.094182 TGGACTCCGTAGCATCTTGTTC 60.094 50.000 0.00 0.00 0.00 3.18
2108 3658 1.899814 TGGACTCCGTAGCATCTTGTT 59.100 47.619 0.00 0.00 0.00 2.83
2109 3659 1.478510 CTGGACTCCGTAGCATCTTGT 59.521 52.381 0.00 0.00 0.00 3.16
2110 3660 1.478510 ACTGGACTCCGTAGCATCTTG 59.521 52.381 0.00 0.00 0.00 3.02
2111 3661 1.853963 ACTGGACTCCGTAGCATCTT 58.146 50.000 0.00 0.00 0.00 2.40
2112 3662 1.751924 GAACTGGACTCCGTAGCATCT 59.248 52.381 0.00 0.00 0.00 2.90
2113 3663 1.751924 AGAACTGGACTCCGTAGCATC 59.248 52.381 0.00 0.00 0.00 3.91
2114 3664 1.853963 AGAACTGGACTCCGTAGCAT 58.146 50.000 0.00 0.00 0.00 3.79
2115 3665 1.544691 GAAGAACTGGACTCCGTAGCA 59.455 52.381 0.00 0.00 0.00 3.49
2116 3666 1.467713 CGAAGAACTGGACTCCGTAGC 60.468 57.143 0.00 0.00 0.00 3.58
2117 3667 1.132643 CCGAAGAACTGGACTCCGTAG 59.867 57.143 0.00 0.00 0.00 3.51
2118 3668 1.171308 CCGAAGAACTGGACTCCGTA 58.829 55.000 0.00 0.00 0.00 4.02
2119 3669 1.965219 CCGAAGAACTGGACTCCGT 59.035 57.895 0.00 0.00 0.00 4.69
2137 3687 2.630580 TGGGGAAATTTGTTACTGGTGC 59.369 45.455 0.00 0.00 0.00 5.01
2182 3738 2.543012 GCAGTGTGCATATGCTGTAGAG 59.457 50.000 27.13 14.02 44.26 2.43
2221 3784 9.612066 ATTTGATGTGTATGTGTATGTGTATGA 57.388 29.630 0.00 0.00 0.00 2.15
2236 3799 6.128580 CGATGTCACTGTGAATTTGATGTGTA 60.129 38.462 12.81 0.00 0.00 2.90
2237 3800 5.334337 CGATGTCACTGTGAATTTGATGTGT 60.334 40.000 12.81 0.00 0.00 3.72
2238 3801 5.084055 CGATGTCACTGTGAATTTGATGTG 58.916 41.667 12.81 0.00 0.00 3.21
2239 3802 4.996758 TCGATGTCACTGTGAATTTGATGT 59.003 37.500 12.81 0.00 0.00 3.06
2240 3803 5.121298 ACTCGATGTCACTGTGAATTTGATG 59.879 40.000 12.81 8.51 0.00 3.07
2242 3805 4.448732 CACTCGATGTCACTGTGAATTTGA 59.551 41.667 12.81 10.76 0.00 2.69
2391 3965 3.036429 AAGGAGCTCGGGGTGATGC 62.036 63.158 7.83 0.00 0.00 3.91
2398 3972 3.689002 GAAGGCCAAGGAGCTCGGG 62.689 68.421 5.01 10.34 0.00 5.14
2410 3984 3.521796 GCCATGCGGAAGAAGGCC 61.522 66.667 0.00 0.00 37.70 5.19
2569 4143 3.551454 CCGACCAGTTCTACAACGAGAAA 60.551 47.826 0.00 0.00 37.20 2.52
2800 4859 2.878406 CAAGAACTTCGTGTGGGTCATT 59.122 45.455 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.