Multiple sequence alignment - TraesCS3D01G352400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G352400 chr3D 100.000 4710 0 0 1 4710 463193601 463188892 0.000000e+00 8698.0
1 TraesCS3D01G352400 chr3D 97.265 3327 31 26 645 3917 462849693 462853013 0.000000e+00 5585.0
2 TraesCS3D01G352400 chr3D 88.889 108 11 1 1756 1863 462850609 462850715 1.060000e-26 132.0
3 TraesCS3D01G352400 chr3D 88.889 108 11 1 1561 1667 462850804 462850911 1.060000e-26 132.0
4 TraesCS3D01G352400 chr3D 88.889 108 11 1 1561 1667 463191846 463191739 1.060000e-26 132.0
5 TraesCS3D01G352400 chr3D 88.889 108 11 1 1756 1863 463192041 463191935 1.060000e-26 132.0
6 TraesCS3D01G352400 chr3B 95.082 2196 73 15 1867 4042 615772742 615774922 0.000000e+00 3424.0
7 TraesCS3D01G352400 chr3B 93.909 2200 86 27 1756 3934 615749533 615751705 0.000000e+00 3277.0
8 TraesCS3D01G352400 chr3B 93.113 2091 84 34 1867 3934 616311081 616309028 0.000000e+00 3009.0
9 TraesCS3D01G352400 chr3B 91.118 653 28 16 645 1281 615748604 615749242 0.000000e+00 857.0
10 TraesCS3D01G352400 chr3B 93.841 552 32 2 2 552 615771342 615771892 0.000000e+00 830.0
11 TraesCS3D01G352400 chr3B 93.841 552 31 3 2 552 616312480 616311931 0.000000e+00 828.0
12 TraesCS3D01G352400 chr3B 91.455 433 25 5 854 1281 616311902 616311477 6.790000e-163 584.0
13 TraesCS3D01G352400 chr3B 91.224 433 26 5 854 1281 615771921 615772346 3.160000e-161 579.0
14 TraesCS3D01G352400 chr3B 87.600 250 24 6 1423 1667 615749393 615749640 2.770000e-72 283.0
15 TraesCS3D01G352400 chr3B 89.888 89 5 2 1291 1376 615749305 615749392 1.390000e-20 111.0
16 TraesCS3D01G352400 chr3A 93.486 2180 98 23 1773 3947 606436197 606434057 0.000000e+00 3199.0
17 TraesCS3D01G352400 chr3A 88.040 1296 95 27 2 1278 606437723 606436469 0.000000e+00 1480.0
18 TraesCS3D01G352400 chr3A 89.144 479 49 3 12 488 51887381 51887858 1.130000e-165 593.0
19 TraesCS3D01G352400 chr3A 84.483 116 16 2 4058 4172 71211714 71211600 3.850000e-21 113.0
20 TraesCS3D01G352400 chr1B 89.868 1747 167 7 1975 3713 512174643 512172899 0.000000e+00 2237.0
21 TraesCS3D01G352400 chr1B 93.304 224 12 1 997 1220 512175834 512175614 1.260000e-85 327.0
22 TraesCS3D01G352400 chr1B 82.258 124 14 3 4238 4355 605924012 605923891 3.000000e-17 100.0
23 TraesCS3D01G352400 chr1A 89.766 1749 167 8 1975 3714 482337732 482335987 0.000000e+00 2228.0
24 TraesCS3D01G352400 chr1A 92.857 224 13 1 997 1220 482338982 482338762 5.880000e-84 322.0
25 TraesCS3D01G352400 chr1D 89.730 1743 165 10 1978 3710 382236377 382234639 0.000000e+00 2215.0
26 TraesCS3D01G352400 chr1D 93.421 228 11 2 997 1223 382237644 382237420 7.550000e-88 335.0
27 TraesCS3D01G352400 chr4A 88.121 1650 194 2 1976 3624 110638837 110637189 0.000000e+00 1960.0
28 TraesCS3D01G352400 chr4A 77.401 177 23 9 4238 4399 650020534 650020360 6.490000e-14 89.8
29 TraesCS3D01G352400 chr7D 90.188 479 40 7 12 488 479109225 479108752 6.700000e-173 617.0
30 TraesCS3D01G352400 chr7D 79.006 181 19 10 4238 4401 73141179 73141001 6.450000e-19 106.0
31 TraesCS3D01G352400 chr7D 83.200 125 12 5 4238 4355 148145273 148145395 6.450000e-19 106.0
32 TraesCS3D01G352400 chr7D 82.258 124 12 8 4238 4353 72317609 72317730 1.080000e-16 99.0
33 TraesCS3D01G352400 chr4D 88.935 479 47 6 12 488 405211559 405212033 1.890000e-163 586.0
34 TraesCS3D01G352400 chr7A 88.589 482 50 5 12 491 70197163 70196685 8.790000e-162 580.0
35 TraesCS3D01G352400 chr7A 97.222 36 1 0 489 524 432698342 432698307 1.420000e-05 62.1
36 TraesCS3D01G352400 chr6A 88.333 480 51 5 12 488 223798259 223797782 5.290000e-159 571.0
37 TraesCS3D01G352400 chr6A 79.394 165 27 5 4238 4398 129120160 129119999 4.980000e-20 110.0
38 TraesCS3D01G352400 chr6D 88.309 479 48 7 14 488 292274695 292274221 6.840000e-158 568.0
39 TraesCS3D01G352400 chr2B 91.518 224 16 1 997 1220 209131666 209131886 5.920000e-79 305.0
40 TraesCS3D01G352400 chr2A 80.117 171 19 4 4241 4398 724306583 724306415 3.850000e-21 113.0
41 TraesCS3D01G352400 chr2D 86.139 101 10 2 4238 4336 247787111 247787209 6.450000e-19 106.0
42 TraesCS3D01G352400 chr5D 82.114 123 14 4 4238 4355 409491382 409491501 1.080000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G352400 chr3D 463188892 463193601 4709 True 2987.333333 8698 92.592667 1 4710 3 chr3D.!!$R1 4709
1 TraesCS3D01G352400 chr3D 462849693 462853013 3320 False 1949.666667 5585 91.681000 645 3917 3 chr3D.!!$F1 3272
2 TraesCS3D01G352400 chr3B 615771342 615774922 3580 False 1611.000000 3424 93.382333 2 4042 3 chr3B.!!$F2 4040
3 TraesCS3D01G352400 chr3B 616309028 616312480 3452 True 1473.666667 3009 92.803000 2 3934 3 chr3B.!!$R1 3932
4 TraesCS3D01G352400 chr3B 615748604 615751705 3101 False 1132.000000 3277 90.628750 645 3934 4 chr3B.!!$F1 3289
5 TraesCS3D01G352400 chr3A 606434057 606437723 3666 True 2339.500000 3199 90.763000 2 3947 2 chr3A.!!$R2 3945
6 TraesCS3D01G352400 chr1B 512172899 512175834 2935 True 1282.000000 2237 91.586000 997 3713 2 chr1B.!!$R2 2716
7 TraesCS3D01G352400 chr1A 482335987 482338982 2995 True 1275.000000 2228 91.311500 997 3714 2 chr1A.!!$R1 2717
8 TraesCS3D01G352400 chr1D 382234639 382237644 3005 True 1275.000000 2215 91.575500 997 3710 2 chr1D.!!$R1 2713
9 TraesCS3D01G352400 chr4A 110637189 110638837 1648 True 1960.000000 1960 88.121000 1976 3624 1 chr4A.!!$R1 1648

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
83 84 0.740516 TTTTTACCGATCGGACCGCC 60.741 55.000 39.55 2.3 38.96 6.13 F
342 344 1.343142 GTTCAATGGCCCGGTTTTTCT 59.657 47.619 0.00 0.0 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
3624 4305 4.776322 CTCCCATGTCGGCGCCAA 62.776 66.667 28.98 4.39 0.0 4.52 R
3718 4444 1.001641 GCTGCCAGAATCACCACCT 60.002 57.895 0.00 0.00 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 0.740516 TTTTTACCGATCGGACCGCC 60.741 55.000 39.55 2.30 38.96 6.13
107 109 3.470267 CCGGTTCGATTGTCGGTG 58.530 61.111 0.00 0.00 40.88 4.94
210 212 5.862924 CATGTAGTGGACAACAAAGTAGG 57.137 43.478 0.00 0.00 42.78 3.18
298 300 6.796785 ATCCCACTTTCCCAATTTCTATTG 57.203 37.500 0.00 0.00 40.70 1.90
341 343 1.606994 GGTTCAATGGCCCGGTTTTTC 60.607 52.381 0.00 0.00 0.00 2.29
342 344 1.343142 GTTCAATGGCCCGGTTTTTCT 59.657 47.619 0.00 0.00 0.00 2.52
418 420 5.459434 GCAGAACGGTCTTATTAGCTTAGAC 59.541 44.000 0.00 0.21 38.02 2.59
540 543 2.953648 TGGCAAATGTATGGCTGATCTG 59.046 45.455 0.00 0.00 45.45 2.90
556 559 2.949177 TCTGCAATAATGGGCCGTAT 57.051 45.000 0.00 0.00 0.00 3.06
561 564 5.414454 TCTGCAATAATGGGCCGTATATTTC 59.586 40.000 0.00 1.65 0.00 2.17
573 576 5.370679 GCCGTATATTTCTACCCAAAAGGA 58.629 41.667 0.00 0.00 39.89 3.36
574 577 5.469084 GCCGTATATTTCTACCCAAAAGGAG 59.531 44.000 0.00 0.00 39.89 3.69
575 578 6.687139 GCCGTATATTTCTACCCAAAAGGAGA 60.687 42.308 0.00 0.00 39.89 3.71
576 579 7.277396 CCGTATATTTCTACCCAAAAGGAGAA 58.723 38.462 0.00 0.00 39.89 2.87
577 580 7.771826 CCGTATATTTCTACCCAAAAGGAGAAA 59.228 37.037 1.63 1.63 41.69 2.52
578 581 9.169592 CGTATATTTCTACCCAAAAGGAGAAAA 57.830 33.333 3.22 0.00 41.25 2.29
581 584 7.669089 ATTTCTACCCAAAAGGAGAAAAACA 57.331 32.000 3.22 0.00 41.25 2.83
582 585 6.459670 TTCTACCCAAAAGGAGAAAAACAC 57.540 37.500 0.00 0.00 39.89 3.32
583 586 4.891168 TCTACCCAAAAGGAGAAAAACACC 59.109 41.667 0.00 0.00 39.89 4.16
584 587 2.769663 ACCCAAAAGGAGAAAAACACCC 59.230 45.455 0.00 0.00 39.89 4.61
585 588 3.038280 CCCAAAAGGAGAAAAACACCCT 58.962 45.455 0.00 0.00 38.24 4.34
586 589 3.454447 CCCAAAAGGAGAAAAACACCCTT 59.546 43.478 0.00 0.00 40.46 3.95
587 590 4.441792 CCAAAAGGAGAAAAACACCCTTG 58.558 43.478 0.00 0.00 38.85 3.61
588 591 4.161377 CCAAAAGGAGAAAAACACCCTTGA 59.839 41.667 0.00 0.00 38.85 3.02
589 592 5.351458 CAAAAGGAGAAAAACACCCTTGAG 58.649 41.667 0.00 0.00 38.85 3.02
590 593 3.953542 AGGAGAAAAACACCCTTGAGT 57.046 42.857 0.00 0.00 0.00 3.41
591 594 4.251103 AGGAGAAAAACACCCTTGAGTT 57.749 40.909 0.00 0.00 0.00 3.01
592 595 4.610333 AGGAGAAAAACACCCTTGAGTTT 58.390 39.130 0.00 0.00 39.46 2.66
593 596 5.023452 AGGAGAAAAACACCCTTGAGTTTT 58.977 37.500 0.00 0.00 46.53 2.43
619 622 2.977772 TGGCAAGAAAAACACCCTTG 57.022 45.000 0.00 0.00 40.00 3.61
638 641 5.242393 CCCTTGAGTGAAAAATGAGACATGT 59.758 40.000 0.00 0.00 0.00 3.21
640 643 7.301054 CCTTGAGTGAAAAATGAGACATGTAC 58.699 38.462 0.00 0.00 0.00 2.90
642 645 6.220201 TGAGTGAAAAATGAGACATGTACGA 58.780 36.000 0.00 0.00 0.00 3.43
643 646 6.366061 TGAGTGAAAAATGAGACATGTACGAG 59.634 38.462 0.00 0.00 0.00 4.18
3624 4305 1.602237 CCAAGATGTACCAGGGCGT 59.398 57.895 0.00 0.00 0.00 5.68
3648 4374 2.203252 CGACATGGGAGGCATGGG 60.203 66.667 0.00 0.00 34.56 4.00
3649 4375 3.010144 GACATGGGAGGCATGGGT 58.990 61.111 0.00 0.00 34.56 4.51
3650 4376 1.454479 GACATGGGAGGCATGGGTG 60.454 63.158 0.00 0.00 34.56 4.61
3651 4377 2.123597 CATGGGAGGCATGGGTGG 60.124 66.667 0.00 0.00 0.00 4.61
3718 4444 2.032620 GAGGTCGATTAAGCTGGGAGA 58.967 52.381 0.00 0.00 0.00 3.71
3729 4455 0.107459 GCTGGGAGAGGTGGTGATTC 60.107 60.000 0.00 0.00 0.00 2.52
3747 4473 3.368190 CTGGCAGCGGGAGTCTGAG 62.368 68.421 0.00 0.00 36.53 3.35
3939 4718 7.627300 GCTTGGATCAAGTTATCTTTCCTGTTC 60.627 40.741 9.07 0.00 42.77 3.18
3944 4723 6.761312 TCAAGTTATCTTTCCTGTTCCGTTA 58.239 36.000 0.00 0.00 0.00 3.18
3947 4726 7.845066 AGTTATCTTTCCTGTTCCGTTATTC 57.155 36.000 0.00 0.00 0.00 1.75
4042 4822 7.576236 CAAAATCTGACGTTCACTACAGAAAT 58.424 34.615 6.49 0.00 41.57 2.17
4043 4823 6.712241 AATCTGACGTTCACTACAGAAATG 57.288 37.500 6.49 0.00 41.57 2.32
4044 4824 5.447624 TCTGACGTTCACTACAGAAATGA 57.552 39.130 0.29 0.00 36.63 2.57
4045 4825 6.025749 TCTGACGTTCACTACAGAAATGAT 57.974 37.500 0.29 0.00 36.63 2.45
4046 4826 7.153217 TCTGACGTTCACTACAGAAATGATA 57.847 36.000 0.29 0.00 36.63 2.15
4047 4827 7.599171 TCTGACGTTCACTACAGAAATGATAA 58.401 34.615 0.29 0.00 36.63 1.75
4048 4828 7.541091 TCTGACGTTCACTACAGAAATGATAAC 59.459 37.037 0.29 0.00 36.63 1.89
4049 4829 6.307077 TGACGTTCACTACAGAAATGATAACG 59.693 38.462 0.00 0.00 34.39 3.18
4050 4830 6.384224 ACGTTCACTACAGAAATGATAACGA 58.616 36.000 10.31 0.00 33.16 3.85
4051 4831 6.864685 ACGTTCACTACAGAAATGATAACGAA 59.135 34.615 10.31 0.00 33.16 3.85
4052 4832 7.544566 ACGTTCACTACAGAAATGATAACGAAT 59.455 33.333 10.31 0.00 33.16 3.34
4053 4833 9.016623 CGTTCACTACAGAAATGATAACGAATA 57.983 33.333 0.00 0.00 31.41 1.75
4143 4923 9.811995 ATAGACGTATTTTAAAGTGTAGATGCA 57.188 29.630 0.00 0.00 0.00 3.96
4144 4924 8.718102 AGACGTATTTTAAAGTGTAGATGCAT 57.282 30.769 0.00 0.00 0.00 3.96
4145 4925 9.162764 AGACGTATTTTAAAGTGTAGATGCATT 57.837 29.630 0.00 0.00 0.00 3.56
4146 4926 9.422196 GACGTATTTTAAAGTGTAGATGCATTC 57.578 33.333 0.00 0.00 0.00 2.67
4147 4927 8.941977 ACGTATTTTAAAGTGTAGATGCATTCA 58.058 29.630 0.00 0.00 0.00 2.57
4148 4928 9.935682 CGTATTTTAAAGTGTAGATGCATTCAT 57.064 29.630 0.00 0.00 35.17 2.57
4153 4933 6.956299 AAAGTGTAGATGCATTCATTTTGC 57.044 33.333 0.00 0.00 40.55 3.68
4154 4934 5.909621 AGTGTAGATGCATTCATTTTGCT 57.090 34.783 0.00 0.00 40.77 3.91
4155 4935 6.276832 AGTGTAGATGCATTCATTTTGCTT 57.723 33.333 0.00 0.00 40.77 3.91
4156 4936 6.327934 AGTGTAGATGCATTCATTTTGCTTC 58.672 36.000 0.00 4.03 41.85 3.86
4157 4937 5.228635 GTGTAGATGCATTCATTTTGCTTCG 59.771 40.000 0.00 0.00 44.52 3.79
4158 4938 4.445452 AGATGCATTCATTTTGCTTCGT 57.555 36.364 0.00 0.00 44.52 3.85
4159 4939 5.565592 AGATGCATTCATTTTGCTTCGTA 57.434 34.783 0.00 0.00 44.52 3.43
4160 4940 6.140303 AGATGCATTCATTTTGCTTCGTAT 57.860 33.333 0.00 0.00 44.52 3.06
4161 4941 7.263100 AGATGCATTCATTTTGCTTCGTATA 57.737 32.000 0.00 0.00 44.52 1.47
4162 4942 7.879070 AGATGCATTCATTTTGCTTCGTATAT 58.121 30.769 0.00 0.00 44.52 0.86
4163 4943 9.002600 AGATGCATTCATTTTGCTTCGTATATA 57.997 29.630 0.00 0.00 44.52 0.86
4164 4944 9.778993 GATGCATTCATTTTGCTTCGTATATAT 57.221 29.630 0.00 0.00 40.77 0.86
4165 4945 8.953507 TGCATTCATTTTGCTTCGTATATATG 57.046 30.769 0.00 0.00 40.77 1.78
4166 4946 8.567104 TGCATTCATTTTGCTTCGTATATATGT 58.433 29.630 1.91 0.00 40.77 2.29
4172 4952 9.988350 CATTTTGCTTCGTATATATGTATTCCC 57.012 33.333 1.91 0.00 0.00 3.97
4173 4953 9.959721 ATTTTGCTTCGTATATATGTATTCCCT 57.040 29.630 1.91 0.00 0.00 4.20
4174 4954 8.997621 TTTGCTTCGTATATATGTATTCCCTC 57.002 34.615 1.91 0.00 0.00 4.30
4175 4955 7.956328 TGCTTCGTATATATGTATTCCCTCT 57.044 36.000 1.91 0.00 0.00 3.69
4176 4956 7.772166 TGCTTCGTATATATGTATTCCCTCTG 58.228 38.462 1.91 0.00 0.00 3.35
4177 4957 7.396339 TGCTTCGTATATATGTATTCCCTCTGT 59.604 37.037 1.91 0.00 0.00 3.41
4178 4958 8.251721 GCTTCGTATATATGTATTCCCTCTGTT 58.748 37.037 1.91 0.00 0.00 3.16
4179 4959 9.790389 CTTCGTATATATGTATTCCCTCTGTTC 57.210 37.037 1.91 0.00 0.00 3.18
4180 4960 7.982224 TCGTATATATGTATTCCCTCTGTTCG 58.018 38.462 1.91 0.00 0.00 3.95
4181 4961 7.066645 TCGTATATATGTATTCCCTCTGTTCGG 59.933 40.741 1.91 0.00 0.00 4.30
4182 4962 4.891992 ATATGTATTCCCTCTGTTCGGG 57.108 45.455 0.00 0.00 43.38 5.14
4183 4963 1.200519 TGTATTCCCTCTGTTCGGGG 58.799 55.000 0.00 0.00 42.23 5.73
4188 4968 3.737702 CCCTCTGTTCGGGGAAAAA 57.262 52.632 0.00 0.00 45.18 1.94
4189 4969 2.215942 CCCTCTGTTCGGGGAAAAAT 57.784 50.000 0.00 0.00 45.18 1.82
4190 4970 1.818674 CCCTCTGTTCGGGGAAAAATG 59.181 52.381 0.00 0.00 45.18 2.32
4191 4971 2.514803 CCTCTGTTCGGGGAAAAATGT 58.485 47.619 0.00 0.00 0.00 2.71
4192 4972 3.560453 CCCTCTGTTCGGGGAAAAATGTA 60.560 47.826 0.00 0.00 45.18 2.29
4193 4973 4.270008 CCTCTGTTCGGGGAAAAATGTAT 58.730 43.478 0.00 0.00 0.00 2.29
4194 4974 4.096382 CCTCTGTTCGGGGAAAAATGTATG 59.904 45.833 0.00 0.00 0.00 2.39
4195 4975 4.658063 TCTGTTCGGGGAAAAATGTATGT 58.342 39.130 0.00 0.00 0.00 2.29
4196 4976 5.806818 TCTGTTCGGGGAAAAATGTATGTA 58.193 37.500 0.00 0.00 0.00 2.29
4197 4977 6.419791 TCTGTTCGGGGAAAAATGTATGTAT 58.580 36.000 0.00 0.00 0.00 2.29
4198 4978 7.566569 TCTGTTCGGGGAAAAATGTATGTATA 58.433 34.615 0.00 0.00 0.00 1.47
4199 4979 7.713507 TCTGTTCGGGGAAAAATGTATGTATAG 59.286 37.037 0.00 0.00 0.00 1.31
4200 4980 7.566569 TGTTCGGGGAAAAATGTATGTATAGA 58.433 34.615 0.00 0.00 0.00 1.98
4201 4981 8.047911 TGTTCGGGGAAAAATGTATGTATAGAA 58.952 33.333 0.00 0.00 0.00 2.10
4202 4982 8.895737 GTTCGGGGAAAAATGTATGTATAGAAA 58.104 33.333 0.00 0.00 0.00 2.52
4203 4983 9.463902 TTCGGGGAAAAATGTATGTATAGAAAA 57.536 29.630 0.00 0.00 0.00 2.29
4204 4984 9.635404 TCGGGGAAAAATGTATGTATAGAAAAT 57.365 29.630 0.00 0.00 0.00 1.82
4227 5007 9.753674 AAATTTAGACAAATTATGGAGTGGAGA 57.246 29.630 0.00 0.00 42.29 3.71
4228 5008 9.753674 AATTTAGACAAATTATGGAGTGGAGAA 57.246 29.630 0.00 0.00 41.51 2.87
4229 5009 9.753674 ATTTAGACAAATTATGGAGTGGAGAAA 57.246 29.630 0.00 0.00 29.80 2.52
4230 5010 9.581289 TTTAGACAAATTATGGAGTGGAGAAAA 57.419 29.630 0.00 0.00 0.00 2.29
4231 5011 9.581289 TTAGACAAATTATGGAGTGGAGAAAAA 57.419 29.630 0.00 0.00 0.00 1.94
4232 5012 8.655935 AGACAAATTATGGAGTGGAGAAAAAT 57.344 30.769 0.00 0.00 0.00 1.82
4233 5013 9.093458 AGACAAATTATGGAGTGGAGAAAAATT 57.907 29.630 0.00 0.00 0.00 1.82
4234 5014 9.358872 GACAAATTATGGAGTGGAGAAAAATTC 57.641 33.333 0.00 0.00 0.00 2.17
4235 5015 8.314021 ACAAATTATGGAGTGGAGAAAAATTCC 58.686 33.333 0.00 0.00 35.20 3.01
4236 5016 8.313292 CAAATTATGGAGTGGAGAAAAATTCCA 58.687 33.333 0.00 0.00 42.30 3.53
4248 5028 9.063615 TGGAGAAAAATTCCACTCTTTACTTAC 57.936 33.333 0.00 0.00 39.74 2.34
4249 5029 8.512956 GGAGAAAAATTCCACTCTTTACTTACC 58.487 37.037 0.00 0.00 34.74 2.85
4250 5030 8.405418 AGAAAAATTCCACTCTTTACTTACCC 57.595 34.615 0.00 0.00 0.00 3.69
4251 5031 8.002459 AGAAAAATTCCACTCTTTACTTACCCA 58.998 33.333 0.00 0.00 0.00 4.51
4252 5032 8.541899 AAAAATTCCACTCTTTACTTACCCAA 57.458 30.769 0.00 0.00 0.00 4.12
4253 5033 8.721133 AAAATTCCACTCTTTACTTACCCAAT 57.279 30.769 0.00 0.00 0.00 3.16
4254 5034 8.721133 AAATTCCACTCTTTACTTACCCAATT 57.279 30.769 0.00 0.00 0.00 2.32
4255 5035 7.939784 ATTCCACTCTTTACTTACCCAATTC 57.060 36.000 0.00 0.00 0.00 2.17
4256 5036 5.812286 TCCACTCTTTACTTACCCAATTCC 58.188 41.667 0.00 0.00 0.00 3.01
4257 5037 5.311121 TCCACTCTTTACTTACCCAATTCCA 59.689 40.000 0.00 0.00 0.00 3.53
4258 5038 6.007703 CCACTCTTTACTTACCCAATTCCAA 58.992 40.000 0.00 0.00 0.00 3.53
4259 5039 6.663523 CCACTCTTTACTTACCCAATTCCAAT 59.336 38.462 0.00 0.00 0.00 3.16
4260 5040 7.362920 CCACTCTTTACTTACCCAATTCCAATG 60.363 40.741 0.00 0.00 0.00 2.82
4261 5041 7.393234 CACTCTTTACTTACCCAATTCCAATGA 59.607 37.037 0.00 0.00 0.00 2.57
4262 5042 7.393515 ACTCTTTACTTACCCAATTCCAATGAC 59.606 37.037 0.00 0.00 0.00 3.06
4263 5043 6.661805 TCTTTACTTACCCAATTCCAATGACC 59.338 38.462 0.00 0.00 0.00 4.02
4264 5044 4.675063 ACTTACCCAATTCCAATGACCT 57.325 40.909 0.00 0.00 0.00 3.85
4265 5045 5.789574 ACTTACCCAATTCCAATGACCTA 57.210 39.130 0.00 0.00 0.00 3.08
4266 5046 6.147437 ACTTACCCAATTCCAATGACCTAA 57.853 37.500 0.00 0.00 0.00 2.69
4267 5047 6.187682 ACTTACCCAATTCCAATGACCTAAG 58.812 40.000 0.00 0.00 0.00 2.18
4268 5048 4.675063 ACCCAATTCCAATGACCTAAGT 57.325 40.909 0.00 0.00 0.00 2.24
4269 5049 4.344104 ACCCAATTCCAATGACCTAAGTG 58.656 43.478 0.00 0.00 0.00 3.16
4270 5050 3.131046 CCCAATTCCAATGACCTAAGTGC 59.869 47.826 0.00 0.00 0.00 4.40
4271 5051 3.181497 CCAATTCCAATGACCTAAGTGCG 60.181 47.826 0.00 0.00 0.00 5.34
4272 5052 1.448985 TTCCAATGACCTAAGTGCGC 58.551 50.000 0.00 0.00 0.00 6.09
4273 5053 0.323302 TCCAATGACCTAAGTGCGCA 59.677 50.000 5.66 5.66 0.00 6.09
4274 5054 1.065491 TCCAATGACCTAAGTGCGCAT 60.065 47.619 15.91 0.00 0.00 4.73
4275 5055 1.064505 CCAATGACCTAAGTGCGCATG 59.935 52.381 15.91 2.87 0.00 4.06
4276 5056 0.734889 AATGACCTAAGTGCGCATGC 59.265 50.000 15.91 7.91 43.20 4.06
4291 5071 5.956270 GCGCATGCAAAAATTAAGAAAAC 57.044 34.783 19.57 0.00 42.15 2.43
4292 5072 5.678921 GCGCATGCAAAAATTAAGAAAACT 58.321 33.333 19.57 0.00 42.15 2.66
4293 5073 6.816377 GCGCATGCAAAAATTAAGAAAACTA 58.184 32.000 19.57 0.00 42.15 2.24
4294 5074 7.455447 GCGCATGCAAAAATTAAGAAAACTAT 58.545 30.769 19.57 0.00 42.15 2.12
4295 5075 7.423314 GCGCATGCAAAAATTAAGAAAACTATG 59.577 33.333 19.57 0.00 42.15 2.23
4296 5076 8.434661 CGCATGCAAAAATTAAGAAAACTATGT 58.565 29.630 19.57 0.00 0.00 2.29
4297 5077 9.532697 GCATGCAAAAATTAAGAAAACTATGTG 57.467 29.630 14.21 0.00 0.00 3.21
4311 5091 9.912634 AGAAAACTATGTGTTGAATGTTATTGG 57.087 29.630 0.00 0.00 39.13 3.16
4312 5092 9.691362 GAAAACTATGTGTTGAATGTTATTGGT 57.309 29.630 0.00 0.00 39.13 3.67
4313 5093 9.691362 AAAACTATGTGTTGAATGTTATTGGTC 57.309 29.630 0.00 0.00 39.13 4.02
4314 5094 8.635765 AACTATGTGTTGAATGTTATTGGTCT 57.364 30.769 0.00 0.00 37.52 3.85
4315 5095 8.635765 ACTATGTGTTGAATGTTATTGGTCTT 57.364 30.769 0.00 0.00 0.00 3.01
4316 5096 8.514594 ACTATGTGTTGAATGTTATTGGTCTTG 58.485 33.333 0.00 0.00 0.00 3.02
4317 5097 6.951062 TGTGTTGAATGTTATTGGTCTTGA 57.049 33.333 0.00 0.00 0.00 3.02
4318 5098 7.523293 TGTGTTGAATGTTATTGGTCTTGAT 57.477 32.000 0.00 0.00 0.00 2.57
4319 5099 7.950512 TGTGTTGAATGTTATTGGTCTTGATT 58.049 30.769 0.00 0.00 0.00 2.57
4320 5100 9.072375 TGTGTTGAATGTTATTGGTCTTGATTA 57.928 29.630 0.00 0.00 0.00 1.75
4321 5101 9.341899 GTGTTGAATGTTATTGGTCTTGATTAC 57.658 33.333 0.00 0.00 0.00 1.89
4322 5102 8.519526 TGTTGAATGTTATTGGTCTTGATTACC 58.480 33.333 0.00 0.00 37.53 2.85
4323 5103 7.315247 TGAATGTTATTGGTCTTGATTACCG 57.685 36.000 0.00 0.00 40.08 4.02
4324 5104 5.751243 ATGTTATTGGTCTTGATTACCGC 57.249 39.130 0.00 0.00 40.08 5.68
4325 5105 3.619483 TGTTATTGGTCTTGATTACCGCG 59.381 43.478 0.00 0.00 40.08 6.46
4326 5106 2.396590 ATTGGTCTTGATTACCGCGT 57.603 45.000 4.92 0.00 40.08 6.01
4327 5107 1.434555 TTGGTCTTGATTACCGCGTG 58.565 50.000 4.92 0.00 40.08 5.34
4328 5108 0.604073 TGGTCTTGATTACCGCGTGA 59.396 50.000 4.92 0.00 40.08 4.35
4329 5109 1.206132 TGGTCTTGATTACCGCGTGAT 59.794 47.619 4.92 0.00 40.08 3.06
4330 5110 1.593006 GGTCTTGATTACCGCGTGATG 59.407 52.381 4.92 0.00 0.00 3.07
4331 5111 2.536365 GTCTTGATTACCGCGTGATGA 58.464 47.619 4.92 0.00 0.00 2.92
4332 5112 2.535984 GTCTTGATTACCGCGTGATGAG 59.464 50.000 4.92 0.00 0.00 2.90
4333 5113 2.425668 TCTTGATTACCGCGTGATGAGA 59.574 45.455 4.92 0.00 0.00 3.27
4334 5114 2.492019 TGATTACCGCGTGATGAGAG 57.508 50.000 4.92 0.00 0.00 3.20
4335 5115 2.021457 TGATTACCGCGTGATGAGAGA 58.979 47.619 4.92 0.00 0.00 3.10
4336 5116 2.623416 TGATTACCGCGTGATGAGAGAT 59.377 45.455 4.92 0.00 0.00 2.75
4337 5117 3.068165 TGATTACCGCGTGATGAGAGATT 59.932 43.478 4.92 0.00 0.00 2.40
4338 5118 3.520290 TTACCGCGTGATGAGAGATTT 57.480 42.857 4.92 0.00 0.00 2.17
4339 5119 2.386661 ACCGCGTGATGAGAGATTTT 57.613 45.000 4.92 0.00 0.00 1.82
4340 5120 2.699954 ACCGCGTGATGAGAGATTTTT 58.300 42.857 4.92 0.00 0.00 1.94
4371 5151 9.558133 ACTTTAAAGTAAGATAGAAGTACCCCT 57.442 33.333 19.26 0.00 37.52 4.79
4376 5156 9.516546 AAAGTAAGATAGAAGTACCCCTTTTTG 57.483 33.333 0.00 0.00 32.03 2.44
4377 5157 8.215954 AGTAAGATAGAAGTACCCCTTTTTGT 57.784 34.615 0.00 0.00 32.03 2.83
4378 5158 8.101419 AGTAAGATAGAAGTACCCCTTTTTGTG 58.899 37.037 0.00 0.00 32.03 3.33
4379 5159 5.816682 AGATAGAAGTACCCCTTTTTGTGG 58.183 41.667 0.00 0.00 32.03 4.17
4392 5172 8.160521 CCCCTTTTTGTGGGTAAATTTTAAAG 57.839 34.615 0.00 0.00 43.09 1.85
4393 5173 7.255312 CCCCTTTTTGTGGGTAAATTTTAAAGC 60.255 37.037 0.00 0.00 43.09 3.51
4394 5174 7.255312 CCCTTTTTGTGGGTAAATTTTAAAGCC 60.255 37.037 0.00 0.00 39.82 4.35
4395 5175 7.283354 CCTTTTTGTGGGTAAATTTTAAAGCCA 59.717 33.333 6.31 6.31 38.41 4.75
4396 5176 8.575649 TTTTTGTGGGTAAATTTTAAAGCCAA 57.424 26.923 11.05 1.79 42.05 4.52
4397 5177 8.575649 TTTTGTGGGTAAATTTTAAAGCCAAA 57.424 26.923 11.05 4.53 42.05 3.28
4398 5178 8.575649 TTTGTGGGTAAATTTTAAAGCCAAAA 57.424 26.923 11.05 9.75 42.05 2.44
4399 5179 8.753497 TTGTGGGTAAATTTTAAAGCCAAAAT 57.247 26.923 11.05 0.00 42.05 1.82
4400 5180 8.159344 TGTGGGTAAATTTTAAAGCCAAAATG 57.841 30.769 11.05 0.00 42.05 2.32
4401 5181 7.993183 TGTGGGTAAATTTTAAAGCCAAAATGA 59.007 29.630 11.05 0.00 42.05 2.57
4402 5182 8.841300 GTGGGTAAATTTTAAAGCCAAAATGAA 58.159 29.630 11.05 0.00 42.05 2.57
4403 5183 9.408648 TGGGTAAATTTTAAAGCCAAAATGAAA 57.591 25.926 7.71 0.00 37.97 2.69
4414 5194 8.837788 AAAGCCAAAATGAAATCTCTAAAAGG 57.162 30.769 0.00 0.00 0.00 3.11
4415 5195 6.401394 AGCCAAAATGAAATCTCTAAAAGGC 58.599 36.000 0.00 0.00 36.22 4.35
4416 5196 5.582269 GCCAAAATGAAATCTCTAAAAGGCC 59.418 40.000 0.00 0.00 0.00 5.19
4417 5197 6.575056 GCCAAAATGAAATCTCTAAAAGGCCT 60.575 38.462 0.00 0.00 0.00 5.19
4418 5198 6.815142 CCAAAATGAAATCTCTAAAAGGCCTG 59.185 38.462 5.69 0.00 0.00 4.85
4419 5199 7.381323 CAAAATGAAATCTCTAAAAGGCCTGT 58.619 34.615 5.69 0.00 0.00 4.00
4420 5200 8.522830 CAAAATGAAATCTCTAAAAGGCCTGTA 58.477 33.333 5.69 0.17 0.00 2.74
4421 5201 8.829373 AAATGAAATCTCTAAAAGGCCTGTAT 57.171 30.769 5.69 0.00 0.00 2.29
4422 5202 8.829373 AATGAAATCTCTAAAAGGCCTGTATT 57.171 30.769 5.69 4.81 0.00 1.89
4423 5203 9.920946 AATGAAATCTCTAAAAGGCCTGTATTA 57.079 29.630 5.69 5.86 0.00 0.98
4424 5204 9.920946 ATGAAATCTCTAAAAGGCCTGTATTAA 57.079 29.630 5.69 0.00 0.00 1.40
4425 5205 9.747898 TGAAATCTCTAAAAGGCCTGTATTAAA 57.252 29.630 5.69 0.00 0.00 1.52
4442 5222 3.821306 AAAAACGGGAGGAGCACTT 57.179 47.368 0.00 0.00 0.00 3.16
4443 5223 2.067365 AAAAACGGGAGGAGCACTTT 57.933 45.000 0.00 0.00 0.00 2.66
4444 5224 2.067365 AAAACGGGAGGAGCACTTTT 57.933 45.000 0.00 0.00 0.00 2.27
4445 5225 2.067365 AAACGGGAGGAGCACTTTTT 57.933 45.000 0.00 0.00 0.00 1.94
4446 5226 1.605753 AACGGGAGGAGCACTTTTTC 58.394 50.000 0.00 0.00 0.00 2.29
4447 5227 0.765510 ACGGGAGGAGCACTTTTTCT 59.234 50.000 0.00 0.00 0.00 2.52
4448 5228 1.143073 ACGGGAGGAGCACTTTTTCTT 59.857 47.619 0.00 0.00 0.00 2.52
4449 5229 1.537202 CGGGAGGAGCACTTTTTCTTG 59.463 52.381 0.00 0.00 0.00 3.02
4450 5230 2.587522 GGGAGGAGCACTTTTTCTTGT 58.412 47.619 0.00 0.00 0.00 3.16
4451 5231 2.294512 GGGAGGAGCACTTTTTCTTGTG 59.705 50.000 0.00 0.00 37.26 3.33
4452 5232 2.952310 GGAGGAGCACTTTTTCTTGTGT 59.048 45.455 0.00 0.00 36.63 3.72
4453 5233 3.381590 GGAGGAGCACTTTTTCTTGTGTT 59.618 43.478 0.00 0.00 36.63 3.32
4454 5234 4.498177 GGAGGAGCACTTTTTCTTGTGTTC 60.498 45.833 0.00 0.00 41.50 3.18
4456 5236 4.639135 GAGCACTTTTTCTTGTGTTCCT 57.361 40.909 0.00 0.00 38.09 3.36
4457 5237 4.602006 GAGCACTTTTTCTTGTGTTCCTC 58.398 43.478 0.00 0.00 38.09 3.71
4458 5238 4.273318 AGCACTTTTTCTTGTGTTCCTCT 58.727 39.130 0.00 0.00 36.63 3.69
4459 5239 4.706962 AGCACTTTTTCTTGTGTTCCTCTT 59.293 37.500 0.00 0.00 36.63 2.85
4460 5240 5.185828 AGCACTTTTTCTTGTGTTCCTCTTT 59.814 36.000 0.00 0.00 36.63 2.52
4461 5241 5.516696 GCACTTTTTCTTGTGTTCCTCTTTC 59.483 40.000 0.00 0.00 36.63 2.62
4462 5242 6.620678 CACTTTTTCTTGTGTTCCTCTTTCA 58.379 36.000 0.00 0.00 0.00 2.69
4463 5243 6.749118 CACTTTTTCTTGTGTTCCTCTTTCAG 59.251 38.462 0.00 0.00 0.00 3.02
4464 5244 6.659242 ACTTTTTCTTGTGTTCCTCTTTCAGA 59.341 34.615 0.00 0.00 0.00 3.27
4465 5245 6.436843 TTTTCTTGTGTTCCTCTTTCAGAC 57.563 37.500 0.00 0.00 0.00 3.51
4466 5246 4.753516 TCTTGTGTTCCTCTTTCAGACA 57.246 40.909 0.00 0.00 0.00 3.41
4467 5247 4.697514 TCTTGTGTTCCTCTTTCAGACAG 58.302 43.478 0.00 0.00 0.00 3.51
4468 5248 3.475566 TGTGTTCCTCTTTCAGACAGG 57.524 47.619 0.00 0.00 0.00 4.00
4469 5249 2.104792 TGTGTTCCTCTTTCAGACAGGG 59.895 50.000 0.00 0.00 0.00 4.45
4470 5250 2.104963 GTGTTCCTCTTTCAGACAGGGT 59.895 50.000 0.00 0.00 0.00 4.34
4471 5251 2.777692 TGTTCCTCTTTCAGACAGGGTT 59.222 45.455 0.00 0.00 0.00 4.11
4472 5252 3.142174 GTTCCTCTTTCAGACAGGGTTG 58.858 50.000 0.00 0.00 0.00 3.77
4473 5253 1.072331 TCCTCTTTCAGACAGGGTTGC 59.928 52.381 0.00 0.00 0.00 4.17
4474 5254 1.072965 CCTCTTTCAGACAGGGTTGCT 59.927 52.381 0.00 0.00 0.00 3.91
4475 5255 2.149578 CTCTTTCAGACAGGGTTGCTG 58.850 52.381 0.00 0.00 32.93 4.41
4476 5256 1.490490 TCTTTCAGACAGGGTTGCTGT 59.510 47.619 0.00 0.00 37.81 4.40
4477 5257 1.605710 CTTTCAGACAGGGTTGCTGTG 59.394 52.381 0.00 0.00 34.88 3.66
4478 5258 0.819259 TTCAGACAGGGTTGCTGTGC 60.819 55.000 0.00 0.00 34.88 4.57
4479 5259 2.113986 AGACAGGGTTGCTGTGCC 59.886 61.111 0.00 0.00 34.88 5.01
4480 5260 2.985847 GACAGGGTTGCTGTGCCC 60.986 66.667 0.00 0.00 45.16 5.36
4494 5274 2.514824 GCCCACGGCCAAGATCTC 60.515 66.667 2.24 0.00 44.06 2.75
4495 5275 2.190578 CCCACGGCCAAGATCTCC 59.809 66.667 2.24 0.00 0.00 3.71
4497 5277 2.202932 CACGGCCAAGATCTCCGG 60.203 66.667 21.45 14.63 46.78 5.14
4498 5278 2.683933 ACGGCCAAGATCTCCGGT 60.684 61.111 21.45 9.81 46.78 5.28
4499 5279 1.380785 ACGGCCAAGATCTCCGGTA 60.381 57.895 21.45 0.00 46.78 4.02
4500 5280 0.974010 ACGGCCAAGATCTCCGGTAA 60.974 55.000 21.45 0.00 46.78 2.85
4501 5281 0.177141 CGGCCAAGATCTCCGGTAAA 59.823 55.000 12.40 0.00 39.52 2.01
4502 5282 1.664873 GGCCAAGATCTCCGGTAAAC 58.335 55.000 0.00 0.00 0.00 2.01
4503 5283 1.209747 GGCCAAGATCTCCGGTAAACT 59.790 52.381 0.00 0.00 0.00 2.66
4504 5284 2.355818 GGCCAAGATCTCCGGTAAACTT 60.356 50.000 0.00 1.03 0.00 2.66
4505 5285 2.937149 GCCAAGATCTCCGGTAAACTTC 59.063 50.000 0.00 0.00 0.00 3.01
4506 5286 3.532542 CCAAGATCTCCGGTAAACTTCC 58.467 50.000 0.00 0.00 0.00 3.46
4507 5287 3.532542 CAAGATCTCCGGTAAACTTCCC 58.467 50.000 0.00 0.00 0.00 3.97
4508 5288 3.117552 AGATCTCCGGTAAACTTCCCT 57.882 47.619 0.00 0.00 0.00 4.20
4509 5289 2.766828 AGATCTCCGGTAAACTTCCCTG 59.233 50.000 0.00 0.00 0.00 4.45
4510 5290 2.314071 TCTCCGGTAAACTTCCCTGA 57.686 50.000 0.00 0.00 0.00 3.86
4511 5291 2.612000 TCTCCGGTAAACTTCCCTGAA 58.388 47.619 0.00 0.00 0.00 3.02
4512 5292 2.565834 TCTCCGGTAAACTTCCCTGAAG 59.434 50.000 0.00 2.40 44.37 3.02
4513 5293 1.626825 TCCGGTAAACTTCCCTGAAGG 59.373 52.381 0.00 0.00 43.25 3.46
4514 5294 1.626825 CCGGTAAACTTCCCTGAAGGA 59.373 52.381 8.56 0.00 43.25 3.36
4523 5303 2.024176 TCCCTGAAGGAGTACAAGCA 57.976 50.000 0.00 0.00 40.93 3.91
4524 5304 1.623811 TCCCTGAAGGAGTACAAGCAC 59.376 52.381 0.00 0.00 40.93 4.40
4525 5305 1.625818 CCCTGAAGGAGTACAAGCACT 59.374 52.381 0.00 0.00 38.24 4.40
4526 5306 2.613977 CCCTGAAGGAGTACAAGCACTG 60.614 54.545 0.00 0.00 38.24 3.66
4527 5307 2.037772 CCTGAAGGAGTACAAGCACTGT 59.962 50.000 0.00 0.00 38.71 3.55
4528 5308 3.258372 CCTGAAGGAGTACAAGCACTGTA 59.742 47.826 0.00 0.00 37.07 2.74
4539 5319 5.835113 ACAAGCACTGTACTGAATTTTGT 57.165 34.783 6.77 8.31 36.10 2.83
4540 5320 6.207691 ACAAGCACTGTACTGAATTTTGTT 57.792 33.333 6.77 0.00 36.10 2.83
4541 5321 6.630071 ACAAGCACTGTACTGAATTTTGTTT 58.370 32.000 6.77 0.00 36.10 2.83
4542 5322 6.531240 ACAAGCACTGTACTGAATTTTGTTTG 59.469 34.615 6.77 10.12 36.10 2.93
4543 5323 6.449635 AGCACTGTACTGAATTTTGTTTGA 57.550 33.333 6.77 0.00 0.00 2.69
4544 5324 6.862209 AGCACTGTACTGAATTTTGTTTGAA 58.138 32.000 6.77 0.00 0.00 2.69
4545 5325 7.491682 AGCACTGTACTGAATTTTGTTTGAAT 58.508 30.769 6.77 0.00 0.00 2.57
4546 5326 8.629158 AGCACTGTACTGAATTTTGTTTGAATA 58.371 29.630 6.77 0.00 0.00 1.75
4547 5327 8.690840 GCACTGTACTGAATTTTGTTTGAATAC 58.309 33.333 6.77 0.00 0.00 1.89
4548 5328 9.729023 CACTGTACTGAATTTTGTTTGAATACA 57.271 29.630 6.77 0.00 0.00 2.29
4567 5347 9.491675 TGAATACAAGTTTATTAACAACGAGGA 57.508 29.630 0.00 0.00 36.70 3.71
4568 5348 9.750882 GAATACAAGTTTATTAACAACGAGGAC 57.249 33.333 0.00 0.00 36.70 3.85
4569 5349 8.836268 ATACAAGTTTATTAACAACGAGGACA 57.164 30.769 0.00 0.00 36.70 4.02
4570 5350 7.739498 ACAAGTTTATTAACAACGAGGACAT 57.261 32.000 0.00 0.00 36.70 3.06
4571 5351 8.161699 ACAAGTTTATTAACAACGAGGACATT 57.838 30.769 0.00 0.00 36.70 2.71
4572 5352 8.287503 ACAAGTTTATTAACAACGAGGACATTC 58.712 33.333 0.00 0.00 36.70 2.67
4573 5353 7.972832 AGTTTATTAACAACGAGGACATTCA 57.027 32.000 0.00 0.00 36.70 2.57
4574 5354 7.803724 AGTTTATTAACAACGAGGACATTCAC 58.196 34.615 0.00 0.00 36.70 3.18
4575 5355 6.730960 TTATTAACAACGAGGACATTCACC 57.269 37.500 0.00 0.00 0.00 4.02
4576 5356 1.508632 AACAACGAGGACATTCACCG 58.491 50.000 0.00 0.00 0.00 4.94
4577 5357 0.949105 ACAACGAGGACATTCACCGC 60.949 55.000 0.00 0.00 0.00 5.68
4578 5358 0.948623 CAACGAGGACATTCACCGCA 60.949 55.000 0.00 0.00 0.00 5.69
4579 5359 0.670546 AACGAGGACATTCACCGCAG 60.671 55.000 0.00 0.00 0.00 5.18
4580 5360 1.215382 CGAGGACATTCACCGCAGA 59.785 57.895 0.00 0.00 0.00 4.26
4581 5361 0.803768 CGAGGACATTCACCGCAGAG 60.804 60.000 0.00 0.00 0.00 3.35
4582 5362 1.078848 AGGACATTCACCGCAGAGC 60.079 57.895 0.00 0.00 0.00 4.09
4583 5363 1.375908 GGACATTCACCGCAGAGCA 60.376 57.895 0.00 0.00 0.00 4.26
4584 5364 1.364626 GGACATTCACCGCAGAGCAG 61.365 60.000 0.00 0.00 0.00 4.24
4585 5365 1.364626 GACATTCACCGCAGAGCAGG 61.365 60.000 0.00 0.00 0.00 4.85
4586 5366 2.110967 CATTCACCGCAGAGCAGGG 61.111 63.158 0.00 0.00 0.00 4.45
4587 5367 3.335356 ATTCACCGCAGAGCAGGGG 62.335 63.158 5.56 5.56 46.27 4.79
4591 5371 4.537433 CCGCAGAGCAGGGGTAGC 62.537 72.222 0.00 0.00 36.89 3.58
4592 5372 3.774528 CGCAGAGCAGGGGTAGCA 61.775 66.667 0.00 0.00 0.00 3.49
4593 5373 2.188994 GCAGAGCAGGGGTAGCAG 59.811 66.667 0.00 0.00 0.00 4.24
4594 5374 2.188994 CAGAGCAGGGGTAGCAGC 59.811 66.667 0.00 0.00 0.00 5.25
4595 5375 3.086600 AGAGCAGGGGTAGCAGCC 61.087 66.667 0.00 0.00 34.31 4.85
4596 5376 4.537433 GAGCAGGGGTAGCAGCCG 62.537 72.222 0.00 0.00 36.39 5.52
4599 5379 3.717294 CAGGGGTAGCAGCCGGTT 61.717 66.667 1.90 0.00 36.39 4.44
4600 5380 3.400054 AGGGGTAGCAGCCGGTTC 61.400 66.667 1.90 0.00 36.39 3.62
4601 5381 3.712907 GGGGTAGCAGCCGGTTCA 61.713 66.667 1.90 0.00 36.39 3.18
4602 5382 2.125106 GGGTAGCAGCCGGTTCAG 60.125 66.667 1.90 0.00 0.00 3.02
4603 5383 2.125106 GGTAGCAGCCGGTTCAGG 60.125 66.667 1.90 0.00 0.00 3.86
4611 5391 2.045926 CCGGTTCAGGCCAGAAGG 60.046 66.667 11.39 6.30 38.23 3.46
4612 5392 2.750350 CGGTTCAGGCCAGAAGGT 59.250 61.111 11.39 0.00 37.19 3.50
4613 5393 1.073199 CGGTTCAGGCCAGAAGGTT 59.927 57.895 11.39 0.00 37.19 3.50
4614 5394 1.237285 CGGTTCAGGCCAGAAGGTTG 61.237 60.000 11.39 0.00 37.19 3.77
4615 5395 0.110486 GGTTCAGGCCAGAAGGTTGA 59.890 55.000 11.39 0.00 37.19 3.18
4616 5396 1.528129 GTTCAGGCCAGAAGGTTGAG 58.472 55.000 11.39 0.00 37.19 3.02
4617 5397 1.072331 GTTCAGGCCAGAAGGTTGAGA 59.928 52.381 11.39 0.00 37.19 3.27
4618 5398 0.687354 TCAGGCCAGAAGGTTGAGAC 59.313 55.000 5.01 0.00 37.19 3.36
4619 5399 0.689623 CAGGCCAGAAGGTTGAGACT 59.310 55.000 5.01 0.00 37.19 3.24
4620 5400 0.689623 AGGCCAGAAGGTTGAGACTG 59.310 55.000 5.01 0.00 37.19 3.51
4621 5401 0.687354 GGCCAGAAGGTTGAGACTGA 59.313 55.000 0.00 0.00 37.19 3.41
4622 5402 1.072331 GGCCAGAAGGTTGAGACTGAA 59.928 52.381 0.00 0.00 37.19 3.02
4623 5403 2.290577 GGCCAGAAGGTTGAGACTGAAT 60.291 50.000 0.00 0.00 37.19 2.57
4624 5404 2.746362 GCCAGAAGGTTGAGACTGAATG 59.254 50.000 0.00 0.00 37.19 2.67
4625 5405 3.557898 GCCAGAAGGTTGAGACTGAATGA 60.558 47.826 0.00 0.00 37.19 2.57
4626 5406 4.645535 CCAGAAGGTTGAGACTGAATGAA 58.354 43.478 0.00 0.00 32.90 2.57
4627 5407 4.694509 CCAGAAGGTTGAGACTGAATGAAG 59.305 45.833 0.00 0.00 32.90 3.02
4628 5408 4.694509 CAGAAGGTTGAGACTGAATGAAGG 59.305 45.833 0.00 0.00 32.90 3.46
4629 5409 4.594920 AGAAGGTTGAGACTGAATGAAGGA 59.405 41.667 0.00 0.00 0.00 3.36
4630 5410 4.550076 AGGTTGAGACTGAATGAAGGAG 57.450 45.455 0.00 0.00 0.00 3.69
4631 5411 4.163427 AGGTTGAGACTGAATGAAGGAGA 58.837 43.478 0.00 0.00 0.00 3.71
4632 5412 4.020662 AGGTTGAGACTGAATGAAGGAGAC 60.021 45.833 0.00 0.00 0.00 3.36
4633 5413 3.857549 TGAGACTGAATGAAGGAGACG 57.142 47.619 0.00 0.00 0.00 4.18
4634 5414 3.157881 TGAGACTGAATGAAGGAGACGT 58.842 45.455 0.00 0.00 0.00 4.34
4635 5415 3.191581 TGAGACTGAATGAAGGAGACGTC 59.808 47.826 7.70 7.70 39.49 4.34
4641 5421 3.036431 TGAAGGAGACGTCAGCAGA 57.964 52.632 19.50 0.00 44.08 4.26
4642 5422 1.328279 TGAAGGAGACGTCAGCAGAA 58.672 50.000 19.50 0.00 44.08 3.02
4643 5423 1.895798 TGAAGGAGACGTCAGCAGAAT 59.104 47.619 19.50 0.00 44.08 2.40
4644 5424 2.266554 GAAGGAGACGTCAGCAGAATG 58.733 52.381 19.50 0.00 38.83 2.67
4645 5425 1.261480 AGGAGACGTCAGCAGAATGT 58.739 50.000 19.50 0.00 39.31 2.71
4646 5426 2.447443 AGGAGACGTCAGCAGAATGTA 58.553 47.619 19.50 0.00 39.31 2.29
4647 5427 2.826128 AGGAGACGTCAGCAGAATGTAA 59.174 45.455 19.50 0.00 39.31 2.41
4648 5428 3.119316 AGGAGACGTCAGCAGAATGTAAG 60.119 47.826 19.50 0.00 39.31 2.34
4649 5429 3.367498 GGAGACGTCAGCAGAATGTAAGT 60.367 47.826 19.50 0.00 39.31 2.24
4650 5430 4.238514 GAGACGTCAGCAGAATGTAAGTT 58.761 43.478 19.50 0.00 39.31 2.66
4651 5431 4.632153 AGACGTCAGCAGAATGTAAGTTT 58.368 39.130 19.50 0.00 39.31 2.66
4652 5432 4.449068 AGACGTCAGCAGAATGTAAGTTTG 59.551 41.667 19.50 0.00 39.31 2.93
4653 5433 3.058914 ACGTCAGCAGAATGTAAGTTTGC 60.059 43.478 0.00 0.00 39.31 3.68
4654 5434 3.187227 CGTCAGCAGAATGTAAGTTTGCT 59.813 43.478 0.00 0.00 45.28 3.91
4655 5435 4.667668 CGTCAGCAGAATGTAAGTTTGCTC 60.668 45.833 0.00 0.00 42.75 4.26
4656 5436 3.433274 TCAGCAGAATGTAAGTTTGCTCG 59.567 43.478 0.00 0.00 42.75 5.03
4657 5437 3.187227 CAGCAGAATGTAAGTTTGCTCGT 59.813 43.478 0.00 0.00 42.75 4.18
4658 5438 3.187227 AGCAGAATGTAAGTTTGCTCGTG 59.813 43.478 0.00 0.00 40.88 4.35
4659 5439 3.667960 GCAGAATGTAAGTTTGCTCGTGG 60.668 47.826 0.00 0.00 39.31 4.94
4660 5440 3.745975 CAGAATGTAAGTTTGCTCGTGGA 59.254 43.478 0.00 0.00 0.00 4.02
4661 5441 4.393062 CAGAATGTAAGTTTGCTCGTGGAT 59.607 41.667 0.00 0.00 0.00 3.41
4662 5442 5.003804 AGAATGTAAGTTTGCTCGTGGATT 58.996 37.500 0.00 0.00 0.00 3.01
4663 5443 4.685169 ATGTAAGTTTGCTCGTGGATTG 57.315 40.909 0.00 0.00 0.00 2.67
4664 5444 2.225491 TGTAAGTTTGCTCGTGGATTGC 59.775 45.455 0.00 0.00 0.00 3.56
4665 5445 1.317613 AAGTTTGCTCGTGGATTGCA 58.682 45.000 0.00 0.00 34.69 4.08
4666 5446 1.317613 AGTTTGCTCGTGGATTGCAA 58.682 45.000 0.00 0.00 43.69 4.08
4669 5449 0.039256 TTGCTCGTGGATTGCAAAGC 60.039 50.000 1.71 7.47 42.65 3.51
4670 5450 1.171549 TGCTCGTGGATTGCAAAGCA 61.172 50.000 15.43 15.43 37.41 3.91
4671 5451 0.455633 GCTCGTGGATTGCAAAGCAG 60.456 55.000 12.52 0.72 40.61 4.24
4672 5452 1.159285 CTCGTGGATTGCAAAGCAGA 58.841 50.000 1.71 0.00 40.61 4.26
4673 5453 1.741706 CTCGTGGATTGCAAAGCAGAT 59.258 47.619 1.71 0.00 40.61 2.90
4674 5454 2.161855 TCGTGGATTGCAAAGCAGATT 58.838 42.857 1.71 0.00 40.61 2.40
4675 5455 2.162208 TCGTGGATTGCAAAGCAGATTC 59.838 45.455 1.71 0.00 40.61 2.52
4676 5456 2.163010 CGTGGATTGCAAAGCAGATTCT 59.837 45.455 1.71 0.00 40.61 2.40
4677 5457 3.374988 CGTGGATTGCAAAGCAGATTCTA 59.625 43.478 1.71 0.00 40.61 2.10
4678 5458 4.495349 CGTGGATTGCAAAGCAGATTCTAG 60.495 45.833 1.71 0.00 40.61 2.43
4679 5459 3.379372 TGGATTGCAAAGCAGATTCTAGC 59.621 43.478 1.71 0.00 40.61 3.42
4680 5460 3.379372 GGATTGCAAAGCAGATTCTAGCA 59.621 43.478 1.71 0.00 40.61 3.49
4681 5461 4.142315 GGATTGCAAAGCAGATTCTAGCAA 60.142 41.667 1.71 7.91 40.61 3.91
4682 5462 4.852134 TTGCAAAGCAGATTCTAGCAAA 57.148 36.364 0.00 0.00 40.61 3.68
4683 5463 5.395682 TTGCAAAGCAGATTCTAGCAAAT 57.604 34.783 0.00 0.00 40.61 2.32
4684 5464 5.395682 TGCAAAGCAGATTCTAGCAAATT 57.604 34.783 9.67 1.78 33.32 1.82
4685 5465 5.404946 TGCAAAGCAGATTCTAGCAAATTC 58.595 37.500 9.67 0.00 33.32 2.17
4686 5466 4.802563 GCAAAGCAGATTCTAGCAAATTCC 59.197 41.667 9.67 0.00 0.00 3.01
4687 5467 5.393896 GCAAAGCAGATTCTAGCAAATTCCT 60.394 40.000 9.67 0.00 0.00 3.36
4688 5468 5.831702 AAGCAGATTCTAGCAAATTCCTG 57.168 39.130 9.67 0.00 0.00 3.86
4689 5469 4.205587 AGCAGATTCTAGCAAATTCCTGG 58.794 43.478 9.67 0.00 0.00 4.45
4690 5470 3.317430 GCAGATTCTAGCAAATTCCTGGG 59.683 47.826 0.00 0.00 0.00 4.45
4691 5471 4.785301 CAGATTCTAGCAAATTCCTGGGA 58.215 43.478 0.00 0.00 0.00 4.37
4692 5472 5.383476 CAGATTCTAGCAAATTCCTGGGAT 58.617 41.667 0.00 0.00 0.00 3.85
4693 5473 5.472820 CAGATTCTAGCAAATTCCTGGGATC 59.527 44.000 0.00 3.75 0.00 3.36
4694 5474 4.860802 TTCTAGCAAATTCCTGGGATCA 57.139 40.909 0.00 0.00 0.00 2.92
4695 5475 5.393068 TTCTAGCAAATTCCTGGGATCAT 57.607 39.130 0.00 0.00 0.00 2.45
4696 5476 5.393068 TCTAGCAAATTCCTGGGATCATT 57.607 39.130 0.00 0.00 0.00 2.57
4697 5477 5.135383 TCTAGCAAATTCCTGGGATCATTG 58.865 41.667 0.00 0.00 0.00 2.82
4698 5478 3.716431 AGCAAATTCCTGGGATCATTGT 58.284 40.909 0.00 0.00 0.00 2.71
4699 5479 4.098894 AGCAAATTCCTGGGATCATTGTT 58.901 39.130 0.00 0.00 0.00 2.83
4700 5480 4.081309 AGCAAATTCCTGGGATCATTGTTG 60.081 41.667 0.00 0.00 0.00 3.33
4701 5481 4.186159 CAAATTCCTGGGATCATTGTTGC 58.814 43.478 0.00 0.00 0.00 4.17
4702 5482 2.905415 TTCCTGGGATCATTGTTGCT 57.095 45.000 0.00 0.00 0.00 3.91
4703 5483 2.425143 TCCTGGGATCATTGTTGCTC 57.575 50.000 0.00 0.00 0.00 4.26
4704 5484 1.064463 TCCTGGGATCATTGTTGCTCC 60.064 52.381 0.00 0.00 37.41 4.70
4705 5485 1.341285 CCTGGGATCATTGTTGCTCCA 60.341 52.381 0.00 0.00 39.47 3.86
4706 5486 2.022195 CTGGGATCATTGTTGCTCCAG 58.978 52.381 0.00 0.00 39.47 3.86
4707 5487 1.355381 TGGGATCATTGTTGCTCCAGT 59.645 47.619 0.00 0.00 39.47 4.00
4708 5488 1.747355 GGGATCATTGTTGCTCCAGTG 59.253 52.381 0.00 0.00 39.47 3.66
4709 5489 2.440409 GGATCATTGTTGCTCCAGTGT 58.560 47.619 0.00 0.00 37.94 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
210 212 2.943033 CCCAATAACCAACTCGGATGTC 59.057 50.000 0.00 0.00 38.63 3.06
298 300 9.657419 AACCATGAAAAATCAGGAATATGTTTC 57.343 29.630 0.00 0.00 0.00 2.78
305 307 7.107542 CCATTGAACCATGAAAAATCAGGAAT 58.892 34.615 0.00 0.00 0.00 3.01
312 314 3.619487 CGGGCCATTGAACCATGAAAAAT 60.619 43.478 4.39 0.00 0.00 1.82
319 321 0.544120 AAACCGGGCCATTGAACCAT 60.544 50.000 6.32 0.00 0.00 3.55
375 377 2.224523 TGCAATCAGACCGGAGAAAACT 60.225 45.455 9.46 0.00 0.00 2.66
540 543 5.897377 AGAAATATACGGCCCATTATTGC 57.103 39.130 0.00 0.00 0.00 3.56
556 559 8.635328 GTGTTTTTCTCCTTTTGGGTAGAAATA 58.365 33.333 0.00 0.00 39.06 1.40
561 564 4.038763 GGGTGTTTTTCTCCTTTTGGGTAG 59.961 45.833 0.00 0.00 40.87 3.18
596 599 4.293662 AGGGTGTTTTTCTTGCCAAAAA 57.706 36.364 0.00 0.00 33.72 1.94
597 600 3.990959 AGGGTGTTTTTCTTGCCAAAA 57.009 38.095 0.00 0.00 0.00 2.44
598 601 3.261897 TCAAGGGTGTTTTTCTTGCCAAA 59.738 39.130 0.00 0.00 38.13 3.28
599 602 2.834549 TCAAGGGTGTTTTTCTTGCCAA 59.165 40.909 0.00 0.00 38.13 4.52
600 603 2.430332 CTCAAGGGTGTTTTTCTTGCCA 59.570 45.455 0.00 0.00 38.13 4.92
601 604 2.430694 ACTCAAGGGTGTTTTTCTTGCC 59.569 45.455 0.00 0.00 38.13 4.52
602 605 3.130340 TCACTCAAGGGTGTTTTTCTTGC 59.870 43.478 0.00 0.00 38.13 4.01
603 606 4.981806 TCACTCAAGGGTGTTTTTCTTG 57.018 40.909 0.00 0.00 39.20 3.02
604 607 5.993748 TTTCACTCAAGGGTGTTTTTCTT 57.006 34.783 0.00 0.00 38.28 2.52
619 622 6.586463 TCTCGTACATGTCTCATTTTTCACTC 59.414 38.462 0.00 0.00 0.00 3.51
638 641 2.682494 GGTGGGCTGGGTCTCGTA 60.682 66.667 0.00 0.00 0.00 3.43
640 643 3.612247 CTTGGTGGGCTGGGTCTCG 62.612 68.421 0.00 0.00 0.00 4.04
642 645 1.360393 TTTCTTGGTGGGCTGGGTCT 61.360 55.000 0.00 0.00 0.00 3.85
643 646 0.895559 CTTTCTTGGTGGGCTGGGTC 60.896 60.000 0.00 0.00 0.00 4.46
3624 4305 4.776322 CTCCCATGTCGGCGCCAA 62.776 66.667 28.98 4.39 0.00 4.52
3718 4444 1.001641 GCTGCCAGAATCACCACCT 60.002 57.895 0.00 0.00 0.00 4.00
3729 4455 3.368190 CTCAGACTCCCGCTGCCAG 62.368 68.421 0.00 0.00 33.45 4.85
3747 4473 3.319405 TCACACTTCAGAGTTCAGAGACC 59.681 47.826 0.00 0.00 32.54 3.85
3939 4718 7.063456 CGTTTTGCACAGATATAGAATAACGG 58.937 38.462 0.00 0.00 32.39 4.44
3971 4750 0.091344 GTCAGTTGATCGTGCGTTCG 59.909 55.000 0.00 0.00 0.00 3.95
3972 4751 1.419374 AGTCAGTTGATCGTGCGTTC 58.581 50.000 0.00 0.00 0.00 3.95
3973 4752 1.865865 AAGTCAGTTGATCGTGCGTT 58.134 45.000 0.00 0.00 0.00 4.84
3974 4753 2.325761 GTAAGTCAGTTGATCGTGCGT 58.674 47.619 0.00 0.00 0.00 5.24
4117 4897 9.811995 TGCATCTACACTTTAAAATACGTCTAT 57.188 29.630 0.00 0.00 0.00 1.98
4118 4898 9.811995 ATGCATCTACACTTTAAAATACGTCTA 57.188 29.630 0.00 0.00 0.00 2.59
4119 4899 8.718102 ATGCATCTACACTTTAAAATACGTCT 57.282 30.769 0.00 0.00 0.00 4.18
4120 4900 9.422196 GAATGCATCTACACTTTAAAATACGTC 57.578 33.333 0.00 0.00 0.00 4.34
4121 4901 8.941977 TGAATGCATCTACACTTTAAAATACGT 58.058 29.630 0.00 0.00 0.00 3.57
4122 4902 9.935682 ATGAATGCATCTACACTTTAAAATACG 57.064 29.630 0.00 0.00 0.00 3.06
4127 4907 8.924691 GCAAAATGAATGCATCTACACTTTAAA 58.075 29.630 0.00 0.00 43.29 1.52
4128 4908 8.306038 AGCAAAATGAATGCATCTACACTTTAA 58.694 29.630 0.00 0.00 46.22 1.52
4129 4909 7.829725 AGCAAAATGAATGCATCTACACTTTA 58.170 30.769 0.00 0.00 46.22 1.85
4130 4910 6.694447 AGCAAAATGAATGCATCTACACTTT 58.306 32.000 0.00 1.05 46.22 2.66
4131 4911 6.276832 AGCAAAATGAATGCATCTACACTT 57.723 33.333 0.00 0.00 46.22 3.16
4132 4912 5.909621 AGCAAAATGAATGCATCTACACT 57.090 34.783 0.00 0.00 46.22 3.55
4133 4913 5.228635 CGAAGCAAAATGAATGCATCTACAC 59.771 40.000 0.00 0.00 46.22 2.90
4134 4914 5.106197 ACGAAGCAAAATGAATGCATCTACA 60.106 36.000 0.00 1.38 46.22 2.74
4135 4915 5.335127 ACGAAGCAAAATGAATGCATCTAC 58.665 37.500 0.00 0.00 46.22 2.59
4136 4916 5.565592 ACGAAGCAAAATGAATGCATCTA 57.434 34.783 0.00 0.00 46.22 1.98
4137 4917 4.445452 ACGAAGCAAAATGAATGCATCT 57.555 36.364 0.00 0.00 46.22 2.90
4138 4918 9.778993 ATATATACGAAGCAAAATGAATGCATC 57.221 29.630 0.00 0.00 46.22 3.91
4139 4919 9.563898 CATATATACGAAGCAAAATGAATGCAT 57.436 29.630 0.00 0.00 46.22 3.96
4140 4920 8.567104 ACATATATACGAAGCAAAATGAATGCA 58.433 29.630 0.00 0.00 46.22 3.96
4141 4921 8.955061 ACATATATACGAAGCAAAATGAATGC 57.045 30.769 0.00 0.00 44.15 3.56
4146 4926 9.988350 GGGAATACATATATACGAAGCAAAATG 57.012 33.333 0.00 0.00 0.00 2.32
4147 4927 9.959721 AGGGAATACATATATACGAAGCAAAAT 57.040 29.630 0.00 0.00 0.00 1.82
4148 4928 9.431887 GAGGGAATACATATATACGAAGCAAAA 57.568 33.333 0.00 0.00 0.00 2.44
4149 4929 8.812972 AGAGGGAATACATATATACGAAGCAAA 58.187 33.333 0.00 0.00 0.00 3.68
4150 4930 8.251026 CAGAGGGAATACATATATACGAAGCAA 58.749 37.037 0.00 0.00 0.00 3.91
4151 4931 7.396339 ACAGAGGGAATACATATATACGAAGCA 59.604 37.037 0.00 0.00 0.00 3.91
4152 4932 7.773149 ACAGAGGGAATACATATATACGAAGC 58.227 38.462 0.00 0.00 0.00 3.86
4153 4933 9.790389 GAACAGAGGGAATACATATATACGAAG 57.210 37.037 0.00 0.00 0.00 3.79
4154 4934 8.456471 CGAACAGAGGGAATACATATATACGAA 58.544 37.037 0.00 0.00 0.00 3.85
4155 4935 7.066645 CCGAACAGAGGGAATACATATATACGA 59.933 40.741 0.00 0.00 0.00 3.43
4156 4936 7.194278 CCGAACAGAGGGAATACATATATACG 58.806 42.308 0.00 0.00 0.00 3.06
4171 4951 2.514803 ACATTTTTCCCCGAACAGAGG 58.485 47.619 0.00 0.00 0.00 3.69
4172 4952 4.700213 ACATACATTTTTCCCCGAACAGAG 59.300 41.667 0.00 0.00 0.00 3.35
4173 4953 4.658063 ACATACATTTTTCCCCGAACAGA 58.342 39.130 0.00 0.00 0.00 3.41
4174 4954 6.693315 ATACATACATTTTTCCCCGAACAG 57.307 37.500 0.00 0.00 0.00 3.16
4175 4955 7.566569 TCTATACATACATTTTTCCCCGAACA 58.433 34.615 0.00 0.00 0.00 3.18
4176 4956 8.441312 TTCTATACATACATTTTTCCCCGAAC 57.559 34.615 0.00 0.00 0.00 3.95
4177 4957 9.463902 TTTTCTATACATACATTTTTCCCCGAA 57.536 29.630 0.00 0.00 0.00 4.30
4178 4958 9.635404 ATTTTCTATACATACATTTTTCCCCGA 57.365 29.630 0.00 0.00 0.00 5.14
4201 4981 9.753674 TCTCCACTCCATAATTTGTCTAAATTT 57.246 29.630 3.66 0.00 42.33 1.82
4202 4982 9.753674 TTCTCCACTCCATAATTTGTCTAAATT 57.246 29.630 0.00 0.00 45.71 1.82
4203 4983 9.753674 TTTCTCCACTCCATAATTTGTCTAAAT 57.246 29.630 0.00 0.00 38.11 1.40
4204 4984 9.581289 TTTTCTCCACTCCATAATTTGTCTAAA 57.419 29.630 0.00 0.00 0.00 1.85
4205 4985 9.581289 TTTTTCTCCACTCCATAATTTGTCTAA 57.419 29.630 0.00 0.00 0.00 2.10
4206 4986 9.753674 ATTTTTCTCCACTCCATAATTTGTCTA 57.246 29.630 0.00 0.00 0.00 2.59
4207 4987 8.655935 ATTTTTCTCCACTCCATAATTTGTCT 57.344 30.769 0.00 0.00 0.00 3.41
4208 4988 9.358872 GAATTTTTCTCCACTCCATAATTTGTC 57.641 33.333 0.00 0.00 0.00 3.18
4209 4989 8.314021 GGAATTTTTCTCCACTCCATAATTTGT 58.686 33.333 0.00 0.00 32.77 2.83
4210 4990 8.313292 TGGAATTTTTCTCCACTCCATAATTTG 58.687 33.333 0.00 0.00 38.07 2.32
4211 4991 8.434589 TGGAATTTTTCTCCACTCCATAATTT 57.565 30.769 0.00 0.00 38.07 1.82
4222 5002 9.063615 GTAAGTAAAGAGTGGAATTTTTCTCCA 57.936 33.333 0.00 0.00 40.77 3.86
4223 5003 8.512956 GGTAAGTAAAGAGTGGAATTTTTCTCC 58.487 37.037 0.00 0.00 0.00 3.71
4224 5004 8.512956 GGGTAAGTAAAGAGTGGAATTTTTCTC 58.487 37.037 0.00 0.00 0.00 2.87
4225 5005 8.002459 TGGGTAAGTAAAGAGTGGAATTTTTCT 58.998 33.333 0.00 0.00 0.00 2.52
4226 5006 8.173542 TGGGTAAGTAAAGAGTGGAATTTTTC 57.826 34.615 0.00 0.00 0.00 2.29
4227 5007 8.541899 TTGGGTAAGTAAAGAGTGGAATTTTT 57.458 30.769 0.00 0.00 0.00 1.94
4228 5008 8.721133 ATTGGGTAAGTAAAGAGTGGAATTTT 57.279 30.769 0.00 0.00 0.00 1.82
4229 5009 8.721133 AATTGGGTAAGTAAAGAGTGGAATTT 57.279 30.769 0.00 0.00 0.00 1.82
4230 5010 7.396339 GGAATTGGGTAAGTAAAGAGTGGAATT 59.604 37.037 0.00 0.00 0.00 2.17
4231 5011 6.890268 GGAATTGGGTAAGTAAAGAGTGGAAT 59.110 38.462 0.00 0.00 0.00 3.01
4232 5012 6.183361 TGGAATTGGGTAAGTAAAGAGTGGAA 60.183 38.462 0.00 0.00 0.00 3.53
4233 5013 5.311121 TGGAATTGGGTAAGTAAAGAGTGGA 59.689 40.000 0.00 0.00 0.00 4.02
4234 5014 5.566469 TGGAATTGGGTAAGTAAAGAGTGG 58.434 41.667 0.00 0.00 0.00 4.00
4235 5015 7.393234 TCATTGGAATTGGGTAAGTAAAGAGTG 59.607 37.037 0.00 0.00 0.00 3.51
4236 5016 7.393515 GTCATTGGAATTGGGTAAGTAAAGAGT 59.606 37.037 0.00 0.00 0.00 3.24
4237 5017 7.148069 GGTCATTGGAATTGGGTAAGTAAAGAG 60.148 40.741 0.00 0.00 0.00 2.85
4238 5018 6.661805 GGTCATTGGAATTGGGTAAGTAAAGA 59.338 38.462 0.00 0.00 0.00 2.52
4239 5019 6.663523 AGGTCATTGGAATTGGGTAAGTAAAG 59.336 38.462 0.00 0.00 0.00 1.85
4240 5020 6.557568 AGGTCATTGGAATTGGGTAAGTAAA 58.442 36.000 0.00 0.00 0.00 2.01
4241 5021 6.147437 AGGTCATTGGAATTGGGTAAGTAA 57.853 37.500 0.00 0.00 0.00 2.24
4242 5022 5.789574 AGGTCATTGGAATTGGGTAAGTA 57.210 39.130 0.00 0.00 0.00 2.24
4243 5023 4.675063 AGGTCATTGGAATTGGGTAAGT 57.325 40.909 0.00 0.00 0.00 2.24
4244 5024 6.095440 CACTTAGGTCATTGGAATTGGGTAAG 59.905 42.308 0.00 0.00 0.00 2.34
4245 5025 5.949354 CACTTAGGTCATTGGAATTGGGTAA 59.051 40.000 0.00 0.00 0.00 2.85
4246 5026 5.505780 CACTTAGGTCATTGGAATTGGGTA 58.494 41.667 0.00 0.00 0.00 3.69
4247 5027 4.344104 CACTTAGGTCATTGGAATTGGGT 58.656 43.478 0.00 0.00 0.00 4.51
4248 5028 3.131046 GCACTTAGGTCATTGGAATTGGG 59.869 47.826 0.00 0.00 0.00 4.12
4249 5029 3.181497 CGCACTTAGGTCATTGGAATTGG 60.181 47.826 0.00 0.00 0.00 3.16
4250 5030 3.731867 GCGCACTTAGGTCATTGGAATTG 60.732 47.826 0.30 0.00 0.00 2.32
4251 5031 2.423538 GCGCACTTAGGTCATTGGAATT 59.576 45.455 0.30 0.00 0.00 2.17
4252 5032 2.017049 GCGCACTTAGGTCATTGGAAT 58.983 47.619 0.30 0.00 0.00 3.01
4253 5033 1.271108 TGCGCACTTAGGTCATTGGAA 60.271 47.619 5.66 0.00 0.00 3.53
4254 5034 0.323302 TGCGCACTTAGGTCATTGGA 59.677 50.000 5.66 0.00 0.00 3.53
4255 5035 1.064505 CATGCGCACTTAGGTCATTGG 59.935 52.381 14.90 0.00 0.00 3.16
4256 5036 1.532505 GCATGCGCACTTAGGTCATTG 60.533 52.381 14.90 3.66 38.36 2.82
4257 5037 0.734889 GCATGCGCACTTAGGTCATT 59.265 50.000 14.90 0.00 38.36 2.57
4258 5038 0.392863 TGCATGCGCACTTAGGTCAT 60.393 50.000 14.90 0.00 45.36 3.06
4259 5039 1.003959 TGCATGCGCACTTAGGTCA 60.004 52.632 14.90 0.00 45.36 4.02
4260 5040 3.889227 TGCATGCGCACTTAGGTC 58.111 55.556 14.90 0.00 45.36 3.85
4269 5049 5.678921 AGTTTTCTTAATTTTTGCATGCGC 58.321 33.333 14.09 0.00 39.24 6.09
4270 5050 8.434661 ACATAGTTTTCTTAATTTTTGCATGCG 58.565 29.630 14.09 0.00 0.00 4.73
4271 5051 9.532697 CACATAGTTTTCTTAATTTTTGCATGC 57.467 29.630 11.82 11.82 0.00 4.06
4285 5065 9.912634 CCAATAACATTCAACACATAGTTTTCT 57.087 29.630 0.00 0.00 38.74 2.52
4286 5066 9.691362 ACCAATAACATTCAACACATAGTTTTC 57.309 29.630 0.00 0.00 38.74 2.29
4287 5067 9.691362 GACCAATAACATTCAACACATAGTTTT 57.309 29.630 0.00 0.00 38.74 2.43
4288 5068 9.077885 AGACCAATAACATTCAACACATAGTTT 57.922 29.630 0.00 0.00 38.74 2.66
4289 5069 8.635765 AGACCAATAACATTCAACACATAGTT 57.364 30.769 0.00 0.00 42.42 2.24
4290 5070 8.514594 CAAGACCAATAACATTCAACACATAGT 58.485 33.333 0.00 0.00 0.00 2.12
4291 5071 8.729756 TCAAGACCAATAACATTCAACACATAG 58.270 33.333 0.00 0.00 0.00 2.23
4292 5072 8.628630 TCAAGACCAATAACATTCAACACATA 57.371 30.769 0.00 0.00 0.00 2.29
4293 5073 7.523293 TCAAGACCAATAACATTCAACACAT 57.477 32.000 0.00 0.00 0.00 3.21
4294 5074 6.951062 TCAAGACCAATAACATTCAACACA 57.049 33.333 0.00 0.00 0.00 3.72
4295 5075 9.341899 GTAATCAAGACCAATAACATTCAACAC 57.658 33.333 0.00 0.00 0.00 3.32
4296 5076 8.519526 GGTAATCAAGACCAATAACATTCAACA 58.480 33.333 0.00 0.00 36.91 3.33
4297 5077 7.696453 CGGTAATCAAGACCAATAACATTCAAC 59.304 37.037 0.00 0.00 36.72 3.18
4298 5078 7.627513 GCGGTAATCAAGACCAATAACATTCAA 60.628 37.037 0.00 0.00 36.72 2.69
4299 5079 6.183360 GCGGTAATCAAGACCAATAACATTCA 60.183 38.462 0.00 0.00 36.72 2.57
4300 5080 6.199393 GCGGTAATCAAGACCAATAACATTC 58.801 40.000 0.00 0.00 36.72 2.67
4301 5081 5.220777 CGCGGTAATCAAGACCAATAACATT 60.221 40.000 0.00 0.00 36.72 2.71
4302 5082 4.272504 CGCGGTAATCAAGACCAATAACAT 59.727 41.667 0.00 0.00 36.72 2.71
4303 5083 3.619483 CGCGGTAATCAAGACCAATAACA 59.381 43.478 0.00 0.00 36.72 2.41
4304 5084 3.619929 ACGCGGTAATCAAGACCAATAAC 59.380 43.478 12.47 0.00 36.72 1.89
4305 5085 3.619483 CACGCGGTAATCAAGACCAATAA 59.381 43.478 12.47 0.00 36.72 1.40
4306 5086 3.119065 TCACGCGGTAATCAAGACCAATA 60.119 43.478 12.47 0.00 36.72 1.90
4307 5087 2.006888 CACGCGGTAATCAAGACCAAT 58.993 47.619 12.47 0.00 36.72 3.16
4308 5088 1.001068 TCACGCGGTAATCAAGACCAA 59.999 47.619 12.47 0.00 36.72 3.67
4309 5089 0.604073 TCACGCGGTAATCAAGACCA 59.396 50.000 12.47 0.00 36.72 4.02
4310 5090 1.593006 CATCACGCGGTAATCAAGACC 59.407 52.381 12.47 0.00 0.00 3.85
4311 5091 2.535984 CTCATCACGCGGTAATCAAGAC 59.464 50.000 12.47 0.00 0.00 3.01
4312 5092 2.425668 TCTCATCACGCGGTAATCAAGA 59.574 45.455 12.47 1.20 0.00 3.02
4313 5093 2.791560 CTCTCATCACGCGGTAATCAAG 59.208 50.000 12.47 0.00 0.00 3.02
4314 5094 2.425668 TCTCTCATCACGCGGTAATCAA 59.574 45.455 12.47 0.00 0.00 2.57
4315 5095 2.021457 TCTCTCATCACGCGGTAATCA 58.979 47.619 12.47 0.00 0.00 2.57
4316 5096 2.776312 TCTCTCATCACGCGGTAATC 57.224 50.000 12.47 0.00 0.00 1.75
4317 5097 3.735237 AATCTCTCATCACGCGGTAAT 57.265 42.857 12.47 0.00 0.00 1.89
4318 5098 3.520290 AAATCTCTCATCACGCGGTAA 57.480 42.857 12.47 0.00 0.00 2.85
4319 5099 3.520290 AAAATCTCTCATCACGCGGTA 57.480 42.857 12.47 0.00 0.00 4.02
4320 5100 2.386661 AAAATCTCTCATCACGCGGT 57.613 45.000 12.47 0.00 0.00 5.68
4345 5125 9.558133 AGGGGTACTTCTATCTTACTTTAAAGT 57.442 33.333 23.58 23.58 42.91 2.66
4350 5130 9.516546 CAAAAAGGGGTACTTCTATCTTACTTT 57.483 33.333 0.00 0.00 38.85 2.66
4351 5131 8.666821 ACAAAAAGGGGTACTTCTATCTTACTT 58.333 33.333 0.00 0.00 38.85 2.24
4352 5132 8.101419 CACAAAAAGGGGTACTTCTATCTTACT 58.899 37.037 0.00 0.00 38.85 2.24
4353 5133 7.336176 CCACAAAAAGGGGTACTTCTATCTTAC 59.664 40.741 0.00 0.00 38.85 2.34
4354 5134 7.399634 CCACAAAAAGGGGTACTTCTATCTTA 58.600 38.462 0.00 0.00 38.85 2.10
4355 5135 6.246163 CCACAAAAAGGGGTACTTCTATCTT 58.754 40.000 0.00 0.00 38.85 2.40
4356 5136 5.281037 CCCACAAAAAGGGGTACTTCTATCT 60.281 44.000 0.00 0.00 40.16 1.98
4357 5137 4.948004 CCCACAAAAAGGGGTACTTCTATC 59.052 45.833 0.00 0.00 40.16 2.08
4358 5138 4.930696 CCCACAAAAAGGGGTACTTCTAT 58.069 43.478 0.00 0.00 40.16 1.98
4359 5139 4.376225 CCCACAAAAAGGGGTACTTCTA 57.624 45.455 0.00 0.00 40.16 2.10
4360 5140 3.238788 CCCACAAAAAGGGGTACTTCT 57.761 47.619 0.00 0.00 40.16 2.85
4369 5149 7.283354 TGGCTTTAAAATTTACCCACAAAAAGG 59.717 33.333 0.00 0.00 0.00 3.11
4370 5150 8.214721 TGGCTTTAAAATTTACCCACAAAAAG 57.785 30.769 0.00 0.00 0.00 2.27
4371 5151 8.575649 TTGGCTTTAAAATTTACCCACAAAAA 57.424 26.923 0.00 0.00 0.00 1.94
4372 5152 8.575649 TTTGGCTTTAAAATTTACCCACAAAA 57.424 26.923 0.00 0.00 0.00 2.44
4373 5153 8.575649 TTTTGGCTTTAAAATTTACCCACAAA 57.424 26.923 0.00 0.00 0.00 2.83
4374 5154 8.624776 CATTTTGGCTTTAAAATTTACCCACAA 58.375 29.630 0.00 0.00 37.97 3.33
4375 5155 7.993183 TCATTTTGGCTTTAAAATTTACCCACA 59.007 29.630 0.00 0.00 37.97 4.17
4376 5156 8.384607 TCATTTTGGCTTTAAAATTTACCCAC 57.615 30.769 0.00 0.00 37.97 4.61
4377 5157 8.980481 TTCATTTTGGCTTTAAAATTTACCCA 57.020 26.923 0.00 0.00 37.97 4.51
4388 5168 9.927668 CCTTTTAGAGATTTCATTTTGGCTTTA 57.072 29.630 0.00 0.00 0.00 1.85
4389 5169 7.388776 GCCTTTTAGAGATTTCATTTTGGCTTT 59.611 33.333 0.00 0.00 0.00 3.51
4390 5170 6.875726 GCCTTTTAGAGATTTCATTTTGGCTT 59.124 34.615 0.00 0.00 0.00 4.35
4391 5171 6.401394 GCCTTTTAGAGATTTCATTTTGGCT 58.599 36.000 0.00 0.00 0.00 4.75
4392 5172 5.582269 GGCCTTTTAGAGATTTCATTTTGGC 59.418 40.000 0.00 0.00 0.00 4.52
4393 5173 6.815142 CAGGCCTTTTAGAGATTTCATTTTGG 59.185 38.462 0.00 0.00 0.00 3.28
4394 5174 7.381323 ACAGGCCTTTTAGAGATTTCATTTTG 58.619 34.615 0.00 0.00 0.00 2.44
4395 5175 7.544804 ACAGGCCTTTTAGAGATTTCATTTT 57.455 32.000 0.00 0.00 0.00 1.82
4396 5176 8.829373 ATACAGGCCTTTTAGAGATTTCATTT 57.171 30.769 0.00 0.00 0.00 2.32
4397 5177 8.829373 AATACAGGCCTTTTAGAGATTTCATT 57.171 30.769 0.00 0.00 0.00 2.57
4398 5178 9.920946 TTAATACAGGCCTTTTAGAGATTTCAT 57.079 29.630 0.00 0.00 0.00 2.57
4399 5179 9.747898 TTTAATACAGGCCTTTTAGAGATTTCA 57.252 29.630 0.00 0.00 0.00 2.69
4424 5204 2.067365 AAAGTGCTCCTCCCGTTTTT 57.933 45.000 0.00 0.00 0.00 1.94
4425 5205 2.067365 AAAAGTGCTCCTCCCGTTTT 57.933 45.000 0.00 0.00 0.00 2.43
4426 5206 1.954382 GAAAAAGTGCTCCTCCCGTTT 59.046 47.619 0.00 0.00 0.00 3.60
4427 5207 1.143073 AGAAAAAGTGCTCCTCCCGTT 59.857 47.619 0.00 0.00 0.00 4.44
4428 5208 0.765510 AGAAAAAGTGCTCCTCCCGT 59.234 50.000 0.00 0.00 0.00 5.28
4429 5209 1.537202 CAAGAAAAAGTGCTCCTCCCG 59.463 52.381 0.00 0.00 0.00 5.14
4430 5210 2.294512 CACAAGAAAAAGTGCTCCTCCC 59.705 50.000 0.00 0.00 0.00 4.30
4431 5211 2.952310 ACACAAGAAAAAGTGCTCCTCC 59.048 45.455 0.00 0.00 39.30 4.30
4432 5212 4.498177 GGAACACAAGAAAAAGTGCTCCTC 60.498 45.833 7.53 0.00 43.97 3.71
4433 5213 3.381590 GGAACACAAGAAAAAGTGCTCCT 59.618 43.478 7.53 0.00 43.97 3.69
4434 5214 3.381590 AGGAACACAAGAAAAAGTGCTCC 59.618 43.478 6.84 6.84 46.37 4.70
4435 5215 4.336713 AGAGGAACACAAGAAAAAGTGCTC 59.663 41.667 0.00 0.00 39.30 4.26
4436 5216 4.273318 AGAGGAACACAAGAAAAAGTGCT 58.727 39.130 0.00 0.00 39.30 4.40
4437 5217 4.639135 AGAGGAACACAAGAAAAAGTGC 57.361 40.909 0.00 0.00 39.30 4.40
4438 5218 6.620678 TGAAAGAGGAACACAAGAAAAAGTG 58.379 36.000 0.00 0.00 41.40 3.16
4439 5219 6.659242 TCTGAAAGAGGAACACAAGAAAAAGT 59.341 34.615 0.00 0.00 38.67 2.66
4440 5220 7.088589 TCTGAAAGAGGAACACAAGAAAAAG 57.911 36.000 0.00 0.00 38.67 2.27
4456 5236 2.260844 CAGCAACCCTGTCTGAAAGA 57.739 50.000 0.00 0.00 34.38 2.52
4478 5258 2.190578 GGAGATCTTGGCCGTGGG 59.809 66.667 0.00 0.00 0.00 4.61
4479 5259 2.202932 CGGAGATCTTGGCCGTGG 60.203 66.667 12.09 0.00 40.17 4.94
4480 5260 1.672854 TACCGGAGATCTTGGCCGTG 61.673 60.000 9.46 12.16 43.35 4.94
4481 5261 0.974010 TTACCGGAGATCTTGGCCGT 60.974 55.000 9.46 9.83 43.35 5.68
4482 5262 0.177141 TTTACCGGAGATCTTGGCCG 59.823 55.000 9.46 13.11 44.42 6.13
4483 5263 1.209747 AGTTTACCGGAGATCTTGGCC 59.790 52.381 9.46 0.00 0.00 5.36
4484 5264 2.693267 AGTTTACCGGAGATCTTGGC 57.307 50.000 9.46 0.00 0.00 4.52
4485 5265 3.532542 GGAAGTTTACCGGAGATCTTGG 58.467 50.000 9.46 12.16 0.00 3.61
4486 5266 3.197983 AGGGAAGTTTACCGGAGATCTTG 59.802 47.826 9.46 0.00 35.82 3.02
4487 5267 3.197983 CAGGGAAGTTTACCGGAGATCTT 59.802 47.826 9.46 7.46 35.82 2.40
4488 5268 2.766828 CAGGGAAGTTTACCGGAGATCT 59.233 50.000 9.46 0.00 35.82 2.75
4489 5269 2.764572 TCAGGGAAGTTTACCGGAGATC 59.235 50.000 9.46 0.00 35.82 2.75
4490 5270 2.829023 TCAGGGAAGTTTACCGGAGAT 58.171 47.619 9.46 0.00 35.82 2.75
4491 5271 2.314071 TCAGGGAAGTTTACCGGAGA 57.686 50.000 9.46 0.00 35.82 3.71
4492 5272 2.354805 CCTTCAGGGAAGTTTACCGGAG 60.355 54.545 9.46 0.00 36.70 4.63
4493 5273 1.626825 CCTTCAGGGAAGTTTACCGGA 59.373 52.381 9.46 0.00 37.92 5.14
4494 5274 1.626825 TCCTTCAGGGAAGTTTACCGG 59.373 52.381 0.00 0.00 41.91 5.28
4495 5275 2.302157 ACTCCTTCAGGGAAGTTTACCG 59.698 50.000 5.37 0.00 44.58 4.02
4496 5276 4.285260 TGTACTCCTTCAGGGAAGTTTACC 59.715 45.833 5.37 0.00 44.58 2.85
4497 5277 5.479124 TGTACTCCTTCAGGGAAGTTTAC 57.521 43.478 5.37 4.37 44.58 2.01
4498 5278 5.512576 GCTTGTACTCCTTCAGGGAAGTTTA 60.513 44.000 5.37 0.00 44.58 2.01
4499 5279 4.747009 GCTTGTACTCCTTCAGGGAAGTTT 60.747 45.833 5.37 0.00 44.58 2.66
4500 5280 3.244596 GCTTGTACTCCTTCAGGGAAGTT 60.245 47.826 5.37 0.00 44.58 2.66
4501 5281 2.303311 GCTTGTACTCCTTCAGGGAAGT 59.697 50.000 5.37 0.00 44.58 3.01
4502 5282 2.303022 TGCTTGTACTCCTTCAGGGAAG 59.697 50.000 0.00 0.00 44.58 3.46
4503 5283 2.038557 GTGCTTGTACTCCTTCAGGGAA 59.961 50.000 0.00 0.00 44.58 3.97
4504 5284 1.623811 GTGCTTGTACTCCTTCAGGGA 59.376 52.381 0.00 0.00 42.77 4.20
4505 5285 1.625818 AGTGCTTGTACTCCTTCAGGG 59.374 52.381 0.00 0.00 35.41 4.45
4506 5286 2.037772 ACAGTGCTTGTACTCCTTCAGG 59.962 50.000 0.00 0.00 38.56 3.86
4507 5287 3.393089 ACAGTGCTTGTACTCCTTCAG 57.607 47.619 0.00 0.00 38.56 3.02
4516 5296 6.935741 ACAAAATTCAGTACAGTGCTTGTA 57.064 33.333 0.00 0.00 41.29 2.41
4517 5297 5.835113 ACAAAATTCAGTACAGTGCTTGT 57.165 34.783 0.00 0.33 43.96 3.16
4518 5298 6.751425 TCAAACAAAATTCAGTACAGTGCTTG 59.249 34.615 0.00 0.00 0.00 4.01
4519 5299 6.862209 TCAAACAAAATTCAGTACAGTGCTT 58.138 32.000 0.00 0.00 0.00 3.91
4520 5300 6.449635 TCAAACAAAATTCAGTACAGTGCT 57.550 33.333 0.00 0.00 0.00 4.40
4521 5301 7.698836 ATTCAAACAAAATTCAGTACAGTGC 57.301 32.000 0.00 0.00 0.00 4.40
4522 5302 9.729023 TGTATTCAAACAAAATTCAGTACAGTG 57.271 29.630 0.00 0.00 0.00 3.66
4541 5321 9.491675 TCCTCGTTGTTAATAAACTTGTATTCA 57.508 29.630 3.42 0.00 36.51 2.57
4542 5322 9.750882 GTCCTCGTTGTTAATAAACTTGTATTC 57.249 33.333 3.42 0.00 36.51 1.75
4543 5323 9.275398 TGTCCTCGTTGTTAATAAACTTGTATT 57.725 29.630 3.42 0.00 36.51 1.89
4544 5324 8.836268 TGTCCTCGTTGTTAATAAACTTGTAT 57.164 30.769 3.42 0.00 36.51 2.29
4545 5325 8.836268 ATGTCCTCGTTGTTAATAAACTTGTA 57.164 30.769 3.42 0.00 36.51 2.41
4546 5326 7.739498 ATGTCCTCGTTGTTAATAAACTTGT 57.261 32.000 3.42 0.00 36.51 3.16
4547 5327 8.286800 TGAATGTCCTCGTTGTTAATAAACTTG 58.713 33.333 3.42 0.00 36.51 3.16
4548 5328 8.287503 GTGAATGTCCTCGTTGTTAATAAACTT 58.712 33.333 3.42 0.00 36.51 2.66
4549 5329 7.094933 GGTGAATGTCCTCGTTGTTAATAAACT 60.095 37.037 3.42 0.00 36.51 2.66
4550 5330 7.019418 GGTGAATGTCCTCGTTGTTAATAAAC 58.981 38.462 0.00 0.00 36.07 2.01
4551 5331 6.128499 CGGTGAATGTCCTCGTTGTTAATAAA 60.128 38.462 0.00 0.00 0.00 1.40
4552 5332 5.349270 CGGTGAATGTCCTCGTTGTTAATAA 59.651 40.000 0.00 0.00 0.00 1.40
4553 5333 4.865925 CGGTGAATGTCCTCGTTGTTAATA 59.134 41.667 0.00 0.00 0.00 0.98
4554 5334 3.682858 CGGTGAATGTCCTCGTTGTTAAT 59.317 43.478 0.00 0.00 0.00 1.40
4555 5335 3.061322 CGGTGAATGTCCTCGTTGTTAA 58.939 45.455 0.00 0.00 0.00 2.01
4556 5336 2.679450 CGGTGAATGTCCTCGTTGTTA 58.321 47.619 0.00 0.00 0.00 2.41
4557 5337 1.508632 CGGTGAATGTCCTCGTTGTT 58.491 50.000 0.00 0.00 0.00 2.83
4558 5338 0.949105 GCGGTGAATGTCCTCGTTGT 60.949 55.000 0.00 0.00 0.00 3.32
4559 5339 0.948623 TGCGGTGAATGTCCTCGTTG 60.949 55.000 0.00 0.00 0.00 4.10
4560 5340 0.670546 CTGCGGTGAATGTCCTCGTT 60.671 55.000 0.00 0.00 0.00 3.85
4561 5341 1.079819 CTGCGGTGAATGTCCTCGT 60.080 57.895 0.00 0.00 0.00 4.18
4562 5342 0.803768 CTCTGCGGTGAATGTCCTCG 60.804 60.000 0.00 0.00 0.00 4.63
4563 5343 1.086634 GCTCTGCGGTGAATGTCCTC 61.087 60.000 0.00 0.00 0.00 3.71
4564 5344 1.078848 GCTCTGCGGTGAATGTCCT 60.079 57.895 0.00 0.00 0.00 3.85
4565 5345 1.364626 CTGCTCTGCGGTGAATGTCC 61.365 60.000 0.00 0.00 0.00 4.02
4566 5346 1.364626 CCTGCTCTGCGGTGAATGTC 61.365 60.000 0.00 0.00 32.22 3.06
4567 5347 1.376424 CCTGCTCTGCGGTGAATGT 60.376 57.895 0.00 0.00 32.22 2.71
4568 5348 2.110967 CCCTGCTCTGCGGTGAATG 61.111 63.158 0.00 0.00 32.22 2.67
4569 5349 2.270205 CCCTGCTCTGCGGTGAAT 59.730 61.111 0.00 0.00 32.22 2.57
4570 5350 4.020617 CCCCTGCTCTGCGGTGAA 62.021 66.667 0.00 0.00 32.22 3.18
4571 5351 3.897681 TACCCCTGCTCTGCGGTGA 62.898 63.158 0.00 0.00 32.22 4.02
4572 5352 3.376935 CTACCCCTGCTCTGCGGTG 62.377 68.421 0.00 0.00 32.22 4.94
4573 5353 3.077556 CTACCCCTGCTCTGCGGT 61.078 66.667 0.00 0.00 32.22 5.68
4574 5354 4.537433 GCTACCCCTGCTCTGCGG 62.537 72.222 0.00 0.00 34.23 5.69
4575 5355 3.729965 CTGCTACCCCTGCTCTGCG 62.730 68.421 0.00 0.00 0.00 5.18
4576 5356 2.188994 CTGCTACCCCTGCTCTGC 59.811 66.667 0.00 0.00 0.00 4.26
4577 5357 2.188994 GCTGCTACCCCTGCTCTG 59.811 66.667 0.00 0.00 0.00 3.35
4578 5358 3.086600 GGCTGCTACCCCTGCTCT 61.087 66.667 0.00 0.00 0.00 4.09
4579 5359 4.537433 CGGCTGCTACCCCTGCTC 62.537 72.222 0.00 0.00 0.00 4.26
4582 5362 3.682292 GAACCGGCTGCTACCCCTG 62.682 68.421 0.00 0.00 0.00 4.45
4583 5363 3.400054 GAACCGGCTGCTACCCCT 61.400 66.667 0.00 0.00 0.00 4.79
4584 5364 3.682292 CTGAACCGGCTGCTACCCC 62.682 68.421 0.00 0.00 0.00 4.95
4585 5365 2.125106 CTGAACCGGCTGCTACCC 60.125 66.667 0.00 0.00 0.00 3.69
4586 5366 2.125106 CCTGAACCGGCTGCTACC 60.125 66.667 0.00 0.00 0.00 3.18
4587 5367 2.820037 GCCTGAACCGGCTGCTAC 60.820 66.667 0.00 0.00 46.63 3.58
4594 5374 2.045926 CCTTCTGGCCTGAACCGG 60.046 66.667 20.15 16.70 37.44 5.28
4595 5375 1.073199 AACCTTCTGGCCTGAACCG 59.927 57.895 20.15 15.07 36.63 4.44
4596 5376 0.110486 TCAACCTTCTGGCCTGAACC 59.890 55.000 20.15 0.00 36.63 3.62
4597 5377 1.072331 TCTCAACCTTCTGGCCTGAAC 59.928 52.381 20.15 0.00 36.63 3.18
4598 5378 1.072331 GTCTCAACCTTCTGGCCTGAA 59.928 52.381 22.23 22.23 36.63 3.02
4599 5379 0.687354 GTCTCAACCTTCTGGCCTGA 59.313 55.000 8.48 8.48 36.63 3.86
4600 5380 0.689623 AGTCTCAACCTTCTGGCCTG 59.310 55.000 3.32 2.92 36.63 4.85
4601 5381 0.689623 CAGTCTCAACCTTCTGGCCT 59.310 55.000 3.32 0.00 36.63 5.19
4602 5382 0.687354 TCAGTCTCAACCTTCTGGCC 59.313 55.000 0.00 0.00 36.63 5.36
4603 5383 2.550830 TTCAGTCTCAACCTTCTGGC 57.449 50.000 0.00 0.00 36.63 4.85
4604 5384 4.277515 TCATTCAGTCTCAACCTTCTGG 57.722 45.455 0.00 0.00 39.83 3.86
4605 5385 4.694509 CCTTCATTCAGTCTCAACCTTCTG 59.305 45.833 0.00 0.00 0.00 3.02
4606 5386 4.594920 TCCTTCATTCAGTCTCAACCTTCT 59.405 41.667 0.00 0.00 0.00 2.85
4607 5387 4.899502 TCCTTCATTCAGTCTCAACCTTC 58.100 43.478 0.00 0.00 0.00 3.46
4608 5388 4.594920 TCTCCTTCATTCAGTCTCAACCTT 59.405 41.667 0.00 0.00 0.00 3.50
4609 5389 4.020662 GTCTCCTTCATTCAGTCTCAACCT 60.021 45.833 0.00 0.00 0.00 3.50
4610 5390 4.249661 GTCTCCTTCATTCAGTCTCAACC 58.750 47.826 0.00 0.00 0.00 3.77
4611 5391 3.923461 CGTCTCCTTCATTCAGTCTCAAC 59.077 47.826 0.00 0.00 0.00 3.18
4612 5392 3.574396 ACGTCTCCTTCATTCAGTCTCAA 59.426 43.478 0.00 0.00 0.00 3.02
4613 5393 3.157881 ACGTCTCCTTCATTCAGTCTCA 58.842 45.455 0.00 0.00 0.00 3.27
4614 5394 3.191581 TGACGTCTCCTTCATTCAGTCTC 59.808 47.826 17.92 0.00 0.00 3.36
4615 5395 3.157881 TGACGTCTCCTTCATTCAGTCT 58.842 45.455 17.92 0.00 0.00 3.24
4616 5396 3.506810 CTGACGTCTCCTTCATTCAGTC 58.493 50.000 17.92 0.00 0.00 3.51
4617 5397 2.353208 GCTGACGTCTCCTTCATTCAGT 60.353 50.000 17.92 0.00 34.26 3.41
4618 5398 2.266554 GCTGACGTCTCCTTCATTCAG 58.733 52.381 17.92 3.13 34.77 3.02
4619 5399 1.618343 TGCTGACGTCTCCTTCATTCA 59.382 47.619 17.92 0.00 0.00 2.57
4620 5400 2.094494 TCTGCTGACGTCTCCTTCATTC 60.094 50.000 17.92 0.00 0.00 2.67
4621 5401 1.895798 TCTGCTGACGTCTCCTTCATT 59.104 47.619 17.92 0.00 0.00 2.57
4622 5402 1.550327 TCTGCTGACGTCTCCTTCAT 58.450 50.000 17.92 0.00 0.00 2.57
4623 5403 1.328279 TTCTGCTGACGTCTCCTTCA 58.672 50.000 17.92 6.39 0.00 3.02
4624 5404 2.266554 CATTCTGCTGACGTCTCCTTC 58.733 52.381 17.92 1.96 0.00 3.46
4625 5405 1.620819 ACATTCTGCTGACGTCTCCTT 59.379 47.619 17.92 0.00 0.00 3.36
4626 5406 1.261480 ACATTCTGCTGACGTCTCCT 58.739 50.000 17.92 0.00 0.00 3.69
4627 5407 2.941453 TACATTCTGCTGACGTCTCC 57.059 50.000 17.92 8.05 0.00 3.71
4628 5408 3.839293 ACTTACATTCTGCTGACGTCTC 58.161 45.455 17.92 9.16 0.00 3.36
4629 5409 3.944055 ACTTACATTCTGCTGACGTCT 57.056 42.857 17.92 0.00 0.00 4.18
4630 5410 4.702392 CAAACTTACATTCTGCTGACGTC 58.298 43.478 9.11 9.11 0.00 4.34
4631 5411 3.058914 GCAAACTTACATTCTGCTGACGT 60.059 43.478 0.00 0.00 0.00 4.34
4632 5412 3.187227 AGCAAACTTACATTCTGCTGACG 59.813 43.478 0.00 0.00 41.65 4.35
4633 5413 4.667668 CGAGCAAACTTACATTCTGCTGAC 60.668 45.833 0.00 0.00 43.19 3.51
4634 5414 3.433274 CGAGCAAACTTACATTCTGCTGA 59.567 43.478 0.00 0.00 43.19 4.26
4635 5415 3.187227 ACGAGCAAACTTACATTCTGCTG 59.813 43.478 0.00 0.00 43.19 4.41
4636 5416 3.187227 CACGAGCAAACTTACATTCTGCT 59.813 43.478 0.00 0.00 45.71 4.24
4637 5417 3.482786 CACGAGCAAACTTACATTCTGC 58.517 45.455 0.00 0.00 0.00 4.26
4638 5418 3.745975 TCCACGAGCAAACTTACATTCTG 59.254 43.478 0.00 0.00 0.00 3.02
4639 5419 4.002906 TCCACGAGCAAACTTACATTCT 57.997 40.909 0.00 0.00 0.00 2.40
4640 5420 4.946784 ATCCACGAGCAAACTTACATTC 57.053 40.909 0.00 0.00 0.00 2.67
4641 5421 4.615912 GCAATCCACGAGCAAACTTACATT 60.616 41.667 0.00 0.00 0.00 2.71
4642 5422 3.119849 GCAATCCACGAGCAAACTTACAT 60.120 43.478 0.00 0.00 0.00 2.29
4643 5423 2.225491 GCAATCCACGAGCAAACTTACA 59.775 45.455 0.00 0.00 0.00 2.41
4644 5424 2.225491 TGCAATCCACGAGCAAACTTAC 59.775 45.455 0.00 0.00 34.97 2.34
4645 5425 2.499197 TGCAATCCACGAGCAAACTTA 58.501 42.857 0.00 0.00 34.97 2.24
4646 5426 1.317613 TGCAATCCACGAGCAAACTT 58.682 45.000 0.00 0.00 34.97 2.66
4647 5427 1.317613 TTGCAATCCACGAGCAAACT 58.682 45.000 0.00 0.00 44.39 2.66
4648 5428 3.863681 TTGCAATCCACGAGCAAAC 57.136 47.368 0.00 0.00 44.39 2.93
4650 5430 0.039256 GCTTTGCAATCCACGAGCAA 60.039 50.000 12.52 0.00 45.53 3.91
4651 5431 1.171549 TGCTTTGCAATCCACGAGCA 61.172 50.000 15.43 15.43 39.30 4.26
4652 5432 0.455633 CTGCTTTGCAATCCACGAGC 60.456 55.000 10.87 10.87 38.41 5.03
4653 5433 1.159285 TCTGCTTTGCAATCCACGAG 58.841 50.000 0.00 0.00 38.41 4.18
4654 5434 1.825090 ATCTGCTTTGCAATCCACGA 58.175 45.000 0.00 1.45 38.41 4.35
4655 5435 2.163010 AGAATCTGCTTTGCAATCCACG 59.837 45.455 0.00 0.00 38.41 4.94
4656 5436 3.863142 AGAATCTGCTTTGCAATCCAC 57.137 42.857 0.00 0.00 38.41 4.02
4657 5437 3.379372 GCTAGAATCTGCTTTGCAATCCA 59.621 43.478 0.00 0.00 38.41 3.41
4658 5438 3.379372 TGCTAGAATCTGCTTTGCAATCC 59.621 43.478 0.00 0.00 38.41 3.01
4659 5439 4.627611 TGCTAGAATCTGCTTTGCAATC 57.372 40.909 0.00 0.00 38.41 2.67
4660 5440 5.395682 TTTGCTAGAATCTGCTTTGCAAT 57.604 34.783 0.00 0.00 38.41 3.56
4661 5441 4.852134 TTTGCTAGAATCTGCTTTGCAA 57.148 36.364 0.00 0.00 38.41 4.08
4662 5442 5.395682 AATTTGCTAGAATCTGCTTTGCA 57.604 34.783 0.00 0.00 36.92 4.08
4663 5443 4.802563 GGAATTTGCTAGAATCTGCTTTGC 59.197 41.667 0.00 0.00 0.00 3.68
4664 5444 6.034591 CAGGAATTTGCTAGAATCTGCTTTG 58.965 40.000 0.00 0.00 0.00 2.77
4665 5445 5.126707 CCAGGAATTTGCTAGAATCTGCTTT 59.873 40.000 0.00 0.00 0.00 3.51
4666 5446 4.643784 CCAGGAATTTGCTAGAATCTGCTT 59.356 41.667 0.00 0.00 0.00 3.91
4667 5447 4.205587 CCAGGAATTTGCTAGAATCTGCT 58.794 43.478 0.00 0.00 0.00 4.24
4668 5448 3.317430 CCCAGGAATTTGCTAGAATCTGC 59.683 47.826 0.00 0.00 0.00 4.26
4669 5449 4.785301 TCCCAGGAATTTGCTAGAATCTG 58.215 43.478 0.00 0.00 0.00 2.90
4670 5450 5.133322 TGATCCCAGGAATTTGCTAGAATCT 59.867 40.000 0.00 0.00 0.00 2.40
4671 5451 5.380043 TGATCCCAGGAATTTGCTAGAATC 58.620 41.667 0.00 0.00 0.00 2.52
4672 5452 5.393068 TGATCCCAGGAATTTGCTAGAAT 57.607 39.130 0.00 0.00 0.00 2.40
4673 5453 4.860802 TGATCCCAGGAATTTGCTAGAA 57.139 40.909 0.00 0.00 0.00 2.10
4674 5454 5.135383 CAATGATCCCAGGAATTTGCTAGA 58.865 41.667 0.00 0.00 0.00 2.43
4675 5455 4.891756 ACAATGATCCCAGGAATTTGCTAG 59.108 41.667 0.00 0.00 0.00 3.42
4676 5456 4.870636 ACAATGATCCCAGGAATTTGCTA 58.129 39.130 0.00 0.00 0.00 3.49
4677 5457 3.716431 ACAATGATCCCAGGAATTTGCT 58.284 40.909 0.00 0.00 0.00 3.91
4678 5458 4.186159 CAACAATGATCCCAGGAATTTGC 58.814 43.478 0.00 0.00 0.00 3.68
4679 5459 4.081309 AGCAACAATGATCCCAGGAATTTG 60.081 41.667 0.00 0.00 0.00 2.32
4680 5460 4.098894 AGCAACAATGATCCCAGGAATTT 58.901 39.130 0.00 0.00 0.00 1.82
4681 5461 3.703052 GAGCAACAATGATCCCAGGAATT 59.297 43.478 0.00 0.00 35.94 2.17
4682 5462 3.294214 GAGCAACAATGATCCCAGGAAT 58.706 45.455 0.00 0.00 35.94 3.01
4683 5463 2.726821 GAGCAACAATGATCCCAGGAA 58.273 47.619 0.00 0.00 35.94 3.36
4684 5464 2.425143 GAGCAACAATGATCCCAGGA 57.575 50.000 0.00 0.00 35.94 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.