Multiple sequence alignment - TraesCS3D01G349600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G349600 chr3D 100.000 2264 0 0 1 2264 461020796 461018533 0 4181
1 TraesCS3D01G349600 chr3A 88.369 2287 165 53 3 2264 603474203 603471993 0 2656
2 TraesCS3D01G349600 chr3A 88.608 711 46 13 1239 1946 603471870 603471192 0 832
3 TraesCS3D01G349600 chr3B 87.974 2270 154 50 38 2259 611428531 611426333 0 2569


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G349600 chr3D 461018533 461020796 2263 True 4181 4181 100.0000 1 2264 1 chr3D.!!$R1 2263
1 TraesCS3D01G349600 chr3A 603471192 603474203 3011 True 1744 2656 88.4885 3 2264 2 chr3A.!!$R1 2261
2 TraesCS3D01G349600 chr3B 611426333 611428531 2198 True 2569 2569 87.9740 38 2259 1 chr3B.!!$R1 2221

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
960 977 0.106335 TAGCTAGGTCTCCTCGACGG 59.894 60.0 0.0 0.0 43.79 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2215 2283 4.084485 GCTCGTTAACTGTTTCTGAGTTCC 60.084 45.833 3.71 0.0 35.3 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.232692 GGTGGTACAGTACTGAATAAACCAA 58.767 40.000 29.30 13.80 41.80 3.67
56 57 9.515020 AATCGGTTAATTAACATGCACTTATTG 57.485 29.630 25.59 0.00 37.92 1.90
58 59 6.695278 CGGTTAATTAACATGCACTTATTGGG 59.305 38.462 25.59 0.00 37.92 4.12
103 104 6.901081 TTATGCTCTATGCTGCTAGAACTA 57.099 37.500 0.00 0.00 43.37 2.24
146 147 8.787818 TGGAATTCAAGGGAATAATTACTAGGT 58.212 33.333 7.93 0.00 42.87 3.08
207 209 6.348950 CCGTACCAGCTCATTTTTGTGATAAA 60.349 38.462 0.00 0.00 0.00 1.40
208 210 7.081349 CGTACCAGCTCATTTTTGTGATAAAA 58.919 34.615 0.00 0.00 0.00 1.52
274 280 5.929278 TGATTTGCTTTTGTTATTGCATGC 58.071 33.333 11.82 11.82 35.27 4.06
313 319 0.670546 GCACGTGGCTCTCTGCTAAA 60.671 55.000 18.88 0.00 42.39 1.85
314 320 2.009042 GCACGTGGCTCTCTGCTAAAT 61.009 52.381 18.88 0.00 42.39 1.40
317 323 4.796290 GCACGTGGCTCTCTGCTAAATATA 60.796 45.833 18.88 0.00 42.39 0.86
506 512 2.932194 AAGGGAGCAGCAGCCAGA 60.932 61.111 0.00 0.00 43.56 3.86
558 564 0.461516 ATGAGAGCACCACATCAGCG 60.462 55.000 0.00 0.00 0.00 5.18
586 592 5.457799 ACGAACGTTAATCTGGTAATCATCG 59.542 40.000 0.00 0.00 0.00 3.84
621 627 1.745232 TAATTGATGGCCACGTCCAC 58.255 50.000 8.16 0.00 39.25 4.02
694 700 4.899687 GCACATGCATGCCGCTCG 62.900 66.667 26.53 9.19 43.06 5.03
728 738 2.442212 TGCATGCACAAAGTCAATGG 57.558 45.000 18.46 0.00 0.00 3.16
771 781 5.220931 GCCAGATCGCTCACAAATTTAATCT 60.221 40.000 0.00 0.00 0.00 2.40
826 840 3.448686 CTGGTGAACAGGCTCGTAATAG 58.551 50.000 0.00 0.00 43.70 1.73
841 855 7.061789 GGCTCGTAATAGTTGGAAAAACAAATG 59.938 37.037 0.00 0.00 30.61 2.32
885 899 3.244112 GGGCCTATATATACATCGGTGGC 60.244 52.174 0.84 7.92 37.34 5.01
887 901 3.067742 GCCTATATATACATCGGTGGCGT 59.932 47.826 0.00 0.00 0.00 5.68
959 976 1.504359 CTAGCTAGGTCTCCTCGACG 58.496 60.000 13.32 0.00 43.79 5.12
960 977 0.106335 TAGCTAGGTCTCCTCGACGG 59.894 60.000 0.00 0.00 43.79 4.79
961 978 2.836793 GCTAGGTCTCCTCGACGGC 61.837 68.421 0.00 0.00 43.79 5.68
962 979 1.153127 CTAGGTCTCCTCGACGGCT 60.153 63.158 0.00 0.00 43.79 5.52
963 980 1.153208 TAGGTCTCCTCGACGGCTC 60.153 63.158 0.00 0.00 43.79 4.70
964 981 2.919960 TAGGTCTCCTCGACGGCTCG 62.920 65.000 0.00 0.77 43.79 5.03
965 982 2.818714 GTCTCCTCGACGGCTCGA 60.819 66.667 8.38 8.38 46.85 4.04
966 983 2.818714 TCTCCTCGACGGCTCGAC 60.819 66.667 5.20 0.00 44.14 4.20
993 1010 6.015856 CCAGTCTCAGTAGTTTCTCTTCAAGA 60.016 42.308 0.00 0.00 0.00 3.02
994 1011 7.429633 CAGTCTCAGTAGTTTCTCTTCAAGAA 58.570 38.462 0.00 0.00 42.35 2.52
995 1012 8.087750 CAGTCTCAGTAGTTTCTCTTCAAGAAT 58.912 37.037 0.00 0.00 43.50 2.40
996 1013 8.303876 AGTCTCAGTAGTTTCTCTTCAAGAATC 58.696 37.037 0.00 0.00 43.50 2.52
997 1014 8.085296 GTCTCAGTAGTTTCTCTTCAAGAATCA 58.915 37.037 0.00 0.00 43.50 2.57
998 1015 8.642432 TCTCAGTAGTTTCTCTTCAAGAATCAA 58.358 33.333 0.00 0.00 43.50 2.57
999 1016 8.824159 TCAGTAGTTTCTCTTCAAGAATCAAG 57.176 34.615 0.00 0.00 43.50 3.02
1268 1285 0.822164 AAGTACGGCGCCTGATTAGT 59.178 50.000 26.68 16.25 0.00 2.24
1271 1288 0.313043 TACGGCGCCTGATTAGTAGC 59.687 55.000 26.68 0.00 0.00 3.58
1370 1388 3.275617 TGGTAGTGTTGTTCTGTGCTT 57.724 42.857 0.00 0.00 0.00 3.91
1382 1400 2.525055 TCTGTGCTTTGTTTTTCGTGC 58.475 42.857 0.00 0.00 0.00 5.34
1386 1404 3.179048 GTGCTTTGTTTTTCGTGCTTCT 58.821 40.909 0.00 0.00 0.00 2.85
1405 1423 5.407407 TTCTCTGAATGTGTACTCCTTCC 57.593 43.478 9.51 0.00 0.00 3.46
1406 1424 4.678256 TCTCTGAATGTGTACTCCTTCCT 58.322 43.478 9.51 0.00 0.00 3.36
1407 1425 5.087323 TCTCTGAATGTGTACTCCTTCCTT 58.913 41.667 9.51 0.00 0.00 3.36
1408 1426 6.253758 TCTCTGAATGTGTACTCCTTCCTTA 58.746 40.000 9.51 0.00 0.00 2.69
1447 1465 4.003648 AGAGTAAAGAAATCCCGCTGTTG 58.996 43.478 0.00 0.00 0.00 3.33
1476 1498 1.001815 CGGTGTTTGTGGCAAAGGTAG 60.002 52.381 0.00 0.00 0.00 3.18
1501 1523 7.709613 AGAAATTTACATACGTGCCTAGGTTAG 59.290 37.037 11.31 4.33 0.00 2.34
1578 1602 8.201554 ACGAAAGTACGATACAGTATTACAGA 57.798 34.615 0.00 0.00 46.88 3.41
1820 1844 1.292061 CGACCTGTCACCGTGAAAAA 58.708 50.000 1.88 0.00 0.00 1.94
1995 2062 7.473027 TCGAAGGTCGTTTTAATATGGATTC 57.527 36.000 0.00 0.00 41.35 2.52
2069 2137 8.313227 CGGATTGAAAATATGTTCACAAATTCG 58.687 33.333 7.88 6.47 37.24 3.34
2084 2152 6.017523 TCACAAATTCGTAAAGTGCTCATGAA 60.018 34.615 0.00 0.00 0.00 2.57
2100 2168 6.919662 TGCTCATGAATTCAAAGAAAGTTCAC 59.080 34.615 19.89 5.38 32.30 3.18
2101 2169 6.919662 GCTCATGAATTCAAAGAAAGTTCACA 59.080 34.615 19.89 0.00 32.30 3.58
2102 2170 7.436080 GCTCATGAATTCAAAGAAAGTTCACAA 59.564 33.333 19.89 0.00 32.30 3.33
2103 2171 9.304731 CTCATGAATTCAAAGAAAGTTCACAAA 57.695 29.630 13.09 0.00 32.30 2.83
2104 2172 9.820725 TCATGAATTCAAAGAAAGTTCACAAAT 57.179 25.926 13.09 0.00 32.30 2.32
2107 2175 9.650539 TGAATTCAAAGAAAGTTCACAAATTCA 57.349 25.926 5.45 13.76 37.92 2.57
2160 2228 6.030849 ACGAATTCAAAATTTGTTCGTGACA 58.969 32.000 25.54 0.00 44.94 3.58
2161 2229 6.020995 ACGAATTCAAAATTTGTTCGTGACAC 60.021 34.615 25.54 0.00 44.94 3.67
2162 2230 6.021074 CGAATTCAAAATTTGTTCGTGACACA 60.021 34.615 17.65 0.00 38.18 3.72
2164 2232 7.769272 ATTCAAAATTTGTTCGTGACACAAT 57.231 28.000 6.37 0.00 38.18 2.71
2178 2246 5.398122 CGTGACACAATAAAAATGTCCACAC 59.602 40.000 6.37 0.00 41.71 3.82
2215 2283 6.456181 GCTCGAGGATTTGAAATAGTGTTCAG 60.456 42.308 15.58 0.00 38.69 3.02
2219 2287 7.454260 AGGATTTGAAATAGTGTTCAGGAAC 57.546 36.000 5.23 5.23 38.69 3.62
2223 2291 7.496529 TTTGAAATAGTGTTCAGGAACTCAG 57.503 36.000 12.86 0.00 41.67 3.35
2227 2295 7.226720 TGAAATAGTGTTCAGGAACTCAGAAAC 59.773 37.037 12.86 2.56 41.67 2.78
2232 2300 5.815740 GTGTTCAGGAACTCAGAAACAGTTA 59.184 40.000 12.86 0.00 41.67 2.24
2235 2303 5.047847 TCAGGAACTCAGAAACAGTTAACG 58.952 41.667 0.00 0.00 34.60 3.18
2237 2305 5.175856 CAGGAACTCAGAAACAGTTAACGAG 59.824 44.000 0.00 1.71 34.60 4.18
2253 2321 9.358123 CAGTTAACGAGCTTGAAATATTATTCG 57.642 33.333 8.31 0.00 31.80 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.797051 TGGTTTATTCAGTACTGTACCACC 58.203 41.667 21.99 20.06 0.00 4.61
1 2 7.916914 ATTGGTTTATTCAGTACTGTACCAC 57.083 36.000 21.99 12.94 0.00 4.16
24 25 9.730420 GTGCATGTTAATTAACCGATTAGAAAT 57.270 29.630 22.47 6.14 35.37 2.17
46 47 2.617788 CCTACACTGCCCAATAAGTGCA 60.618 50.000 2.83 0.00 46.28 4.57
56 57 2.498167 CATAATGCTCCTACACTGCCC 58.502 52.381 0.00 0.00 0.00 5.36
58 59 2.564771 TGCATAATGCTCCTACACTGC 58.435 47.619 0.00 0.00 45.31 4.40
84 85 3.978217 CGTTAGTTCTAGCAGCATAGAGC 59.022 47.826 0.00 1.71 46.19 4.09
87 88 9.444534 CATATATCGTTAGTTCTAGCAGCATAG 57.555 37.037 0.00 0.00 0.00 2.23
92 93 7.940557 CGACATATATCGTTAGTTCTAGCAG 57.059 40.000 0.00 0.00 37.33 4.24
146 147 3.947196 TGCTAACGGTTCTATACGGAGAA 59.053 43.478 0.00 0.00 32.97 2.87
258 264 6.183360 GGGAATCAAGCATGCAATAACAAAAG 60.183 38.462 21.98 0.00 0.00 2.27
274 280 2.162408 GCAAACCGAAGAGGGAATCAAG 59.838 50.000 0.00 0.00 46.96 3.02
313 319 4.159321 CACTCATGAGCCGTCCTGATATAT 59.841 45.833 22.83 0.00 28.21 0.86
314 320 3.507622 CACTCATGAGCCGTCCTGATATA 59.492 47.826 22.83 0.00 28.21 0.86
317 323 0.463204 CACTCATGAGCCGTCCTGAT 59.537 55.000 22.83 0.00 28.21 2.90
456 462 1.134699 TGGCTGCTCAGTACTGTATGC 60.135 52.381 21.99 21.91 0.00 3.14
558 564 6.529125 TGATTACCAGATTAACGTTCGTCTTC 59.471 38.462 2.82 4.57 0.00 2.87
586 592 6.401903 CCATCAATTAAGCATACGAGCATCTC 60.402 42.308 0.00 0.00 36.85 2.75
621 627 2.814336 GTCTGGTTAAGGACTTGCTTGG 59.186 50.000 0.00 0.00 0.00 3.61
694 700 4.107051 GCATATCCATGGCGCGCC 62.107 66.667 42.35 42.35 32.36 6.53
826 840 3.245048 CGTCTGCCATTTGTTTTTCCAAC 59.755 43.478 0.00 0.00 0.00 3.77
863 877 3.244112 GCCACCGATGTATATATAGGCCC 60.244 52.174 0.00 0.00 33.68 5.80
885 899 4.201851 CCTGCTTGATTGAATTACAGGACG 60.202 45.833 9.66 0.00 44.80 4.79
887 901 3.696051 GCCTGCTTGATTGAATTACAGGA 59.304 43.478 16.04 0.00 44.80 3.86
959 976 2.680352 TGAGACTGGGGTCGAGCC 60.680 66.667 25.56 25.56 46.29 4.70
960 977 0.680280 TACTGAGACTGGGGTCGAGC 60.680 60.000 5.93 5.93 46.29 5.03
961 978 1.340211 ACTACTGAGACTGGGGTCGAG 60.340 57.143 0.00 0.00 46.29 4.04
962 979 0.697079 ACTACTGAGACTGGGGTCGA 59.303 55.000 0.00 0.00 46.29 4.20
963 980 1.546961 AACTACTGAGACTGGGGTCG 58.453 55.000 0.00 0.00 46.29 4.79
964 981 3.166679 AGAAACTACTGAGACTGGGGTC 58.833 50.000 0.00 0.00 42.41 4.46
965 982 3.166679 GAGAAACTACTGAGACTGGGGT 58.833 50.000 0.00 0.00 0.00 4.95
966 983 3.436243 AGAGAAACTACTGAGACTGGGG 58.564 50.000 0.00 0.00 0.00 4.96
993 1010 1.661341 GCCTCTGCGACATCTTGATT 58.339 50.000 0.00 0.00 0.00 2.57
994 1011 0.179062 GGCCTCTGCGACATCTTGAT 60.179 55.000 0.00 0.00 38.85 2.57
995 1012 1.219124 GGCCTCTGCGACATCTTGA 59.781 57.895 0.00 0.00 38.85 3.02
996 1013 2.169789 CGGCCTCTGCGACATCTTG 61.170 63.158 0.00 0.00 38.85 3.02
997 1014 2.185350 CGGCCTCTGCGACATCTT 59.815 61.111 0.00 0.00 38.85 2.40
998 1015 3.842923 CCGGCCTCTGCGACATCT 61.843 66.667 0.00 0.00 38.85 2.90
999 1016 4.899239 CCCGGCCTCTGCGACATC 62.899 72.222 0.00 0.00 38.85 3.06
1370 1388 4.955925 TTCAGAGAAGCACGAAAAACAA 57.044 36.364 0.00 0.00 0.00 2.83
1382 1400 5.186797 AGGAAGGAGTACACATTCAGAGAAG 59.813 44.000 17.31 0.00 33.14 2.85
1386 1404 6.928348 TTAAGGAAGGAGTACACATTCAGA 57.072 37.500 17.31 1.79 33.14 3.27
1405 1423 3.507233 TCTGGTCAGGCAAGCAAATTAAG 59.493 43.478 0.00 0.00 0.00 1.85
1406 1424 3.495331 TCTGGTCAGGCAAGCAAATTAA 58.505 40.909 0.00 0.00 0.00 1.40
1407 1425 3.084039 CTCTGGTCAGGCAAGCAAATTA 58.916 45.455 0.00 0.00 0.00 1.40
1408 1426 1.891150 CTCTGGTCAGGCAAGCAAATT 59.109 47.619 0.00 0.00 0.00 1.82
1457 1479 2.303175 TCTACCTTTGCCACAAACACC 58.697 47.619 0.00 0.00 0.00 4.16
1476 1498 6.673154 AACCTAGGCACGTATGTAAATTTC 57.327 37.500 9.30 0.00 0.00 2.17
1501 1523 0.460987 AGAGCTGTGCCGCATTACTC 60.461 55.000 0.00 3.93 0.00 2.59
1562 1586 8.512138 TCCATACACATCTGTAATACTGTATCG 58.488 37.037 0.00 0.00 36.43 2.92
1571 1595 6.814954 AGGAGTTCCATACACATCTGTAAT 57.185 37.500 0.28 0.00 36.43 1.89
1572 1596 6.097839 GGTAGGAGTTCCATACACATCTGTAA 59.902 42.308 0.28 0.00 36.43 2.41
1573 1597 5.597182 GGTAGGAGTTCCATACACATCTGTA 59.403 44.000 0.28 0.00 37.28 2.74
1574 1598 4.406003 GGTAGGAGTTCCATACACATCTGT 59.594 45.833 0.28 0.00 38.89 3.41
1575 1599 4.499865 CGGTAGGAGTTCCATACACATCTG 60.500 50.000 0.28 0.00 38.89 2.90
1576 1600 3.637229 CGGTAGGAGTTCCATACACATCT 59.363 47.826 0.28 0.00 38.89 2.90
1577 1601 3.383825 ACGGTAGGAGTTCCATACACATC 59.616 47.826 0.28 0.00 38.89 3.06
1578 1602 3.371965 ACGGTAGGAGTTCCATACACAT 58.628 45.455 0.28 0.00 38.89 3.21
1615 1639 0.594284 CGGATTAGCGACGGTTCTCC 60.594 60.000 4.26 10.84 0.00 3.71
1691 1715 1.402259 CTGCTACCATCGACTCGTCTT 59.598 52.381 0.00 0.00 0.00 3.01
1820 1844 4.832266 TGCCCATGTCACTTTCTATTTGTT 59.168 37.500 0.00 0.00 0.00 2.83
1822 1846 4.218200 TGTGCCCATGTCACTTTCTATTTG 59.782 41.667 14.04 0.00 35.58 2.32
2038 2105 8.499403 TGTGAACATATTTTCAATCCGTGATA 57.501 30.769 5.88 0.00 37.24 2.15
2054 2122 7.041712 TGAGCACTTTACGAATTTGTGAACATA 60.042 33.333 8.70 0.00 0.00 2.29
2056 2124 5.065346 TGAGCACTTTACGAATTTGTGAACA 59.935 36.000 8.70 0.00 0.00 3.18
2069 2137 8.801715 TTTCTTTGAATTCATGAGCACTTTAC 57.198 30.769 9.40 0.00 0.00 2.01
2110 2178 9.703892 TCAACATTTTTGAATCCACGAATTATT 57.296 25.926 0.00 0.00 0.00 1.40
2111 2179 9.139174 GTCAACATTTTTGAATCCACGAATTAT 57.861 29.630 0.00 0.00 0.00 1.28
2112 2180 7.324856 CGTCAACATTTTTGAATCCACGAATTA 59.675 33.333 0.00 0.00 0.00 1.40
2113 2181 6.143758 CGTCAACATTTTTGAATCCACGAATT 59.856 34.615 0.00 0.00 0.00 2.17
2114 2182 5.629020 CGTCAACATTTTTGAATCCACGAAT 59.371 36.000 0.00 0.00 0.00 3.34
2115 2183 4.973051 CGTCAACATTTTTGAATCCACGAA 59.027 37.500 0.00 0.00 0.00 3.85
2116 2184 4.273724 TCGTCAACATTTTTGAATCCACGA 59.726 37.500 0.00 0.00 0.00 4.35
2117 2185 4.532276 TCGTCAACATTTTTGAATCCACG 58.468 39.130 0.00 0.00 0.00 4.94
2118 2186 7.168972 TGAATTCGTCAACATTTTTGAATCCAC 59.831 33.333 0.04 0.00 31.51 4.02
2178 2246 4.627611 ATCCTCGAGCAATGTTTGAATG 57.372 40.909 6.99 0.00 0.00 2.67
2182 2250 4.424061 TCAAATCCTCGAGCAATGTTTG 57.576 40.909 6.99 12.14 0.00 2.93
2183 2251 5.452078 TTTCAAATCCTCGAGCAATGTTT 57.548 34.783 6.99 0.25 0.00 2.83
2184 2252 5.649782 ATTTCAAATCCTCGAGCAATGTT 57.350 34.783 6.99 0.00 0.00 2.71
2185 2253 5.882557 ACTATTTCAAATCCTCGAGCAATGT 59.117 36.000 6.99 0.00 0.00 2.71
2186 2254 6.183360 ACACTATTTCAAATCCTCGAGCAATG 60.183 38.462 6.99 3.22 0.00 2.82
2187 2255 5.882557 ACACTATTTCAAATCCTCGAGCAAT 59.117 36.000 6.99 0.00 0.00 3.56
2188 2256 5.245531 ACACTATTTCAAATCCTCGAGCAA 58.754 37.500 6.99 0.00 0.00 3.91
2189 2257 4.832248 ACACTATTTCAAATCCTCGAGCA 58.168 39.130 6.99 0.00 0.00 4.26
2190 2258 5.351465 TGAACACTATTTCAAATCCTCGAGC 59.649 40.000 6.99 0.00 32.42 5.03
2215 2283 4.084485 GCTCGTTAACTGTTTCTGAGTTCC 60.084 45.833 3.71 0.00 35.30 3.62
2219 2287 4.745125 TCAAGCTCGTTAACTGTTTCTGAG 59.255 41.667 3.71 4.96 0.00 3.35
2223 2291 8.950403 AATATTTCAAGCTCGTTAACTGTTTC 57.050 30.769 3.71 0.00 0.00 2.78
2227 2295 9.358123 CGAATAATATTTCAAGCTCGTTAACTG 57.642 33.333 3.71 0.00 0.00 3.16
2232 2300 7.534085 TCACGAATAATATTTCAAGCTCGTT 57.466 32.000 0.00 0.00 36.24 3.85
2235 2303 9.935682 TGAATTCACGAATAATATTTCAAGCTC 57.064 29.630 3.38 0.00 0.00 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.