Multiple sequence alignment - TraesCS3D01G347600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G347600 chr3D 100.000 2150 0 0 1 2150 459195876 459193727 0.000000e+00 3971.0
1 TraesCS3D01G347600 chr3D 86.685 368 32 12 290 650 459160735 459160378 2.000000e-105 392.0
2 TraesCS3D01G347600 chr3D 82.526 475 28 29 726 1151 459160331 459159863 1.210000e-97 366.0
3 TraesCS3D01G347600 chr3D 93.023 43 0 2 1475 1514 459194347 459194305 2.300000e-05 60.2
4 TraesCS3D01G347600 chr3D 93.023 43 0 2 1530 1572 459194402 459194363 2.300000e-05 60.2
5 TraesCS3D01G347600 chr3D 100.000 29 0 0 1530 1558 459159558 459159530 1.000000e-03 54.7
6 TraesCS3D01G347600 chr3B 88.240 1267 66 42 64 1288 606559757 606558532 0.000000e+00 1437.0
7 TraesCS3D01G347600 chr3B 82.018 773 76 35 685 1409 606421263 606420506 1.100000e-167 599.0
8 TraesCS3D01G347600 chr3B 90.000 370 30 7 1278 1641 606558360 606557992 2.500000e-129 472.0
9 TraesCS3D01G347600 chr3B 81.351 370 36 16 290 650 606421609 606421264 9.780000e-69 270.0
10 TraesCS3D01G347600 chr3B 76.016 492 67 40 829 1309 606380299 606379848 7.780000e-50 207.0
11 TraesCS3D01G347600 chr3B 92.593 81 5 1 1652 1732 606558011 606557932 4.850000e-22 115.0
12 TraesCS3D01G347600 chr3B 100.000 29 0 0 1530 1558 606420412 606420384 1.000000e-03 54.7
13 TraesCS3D01G347600 chr3A 88.860 772 48 18 891 1641 601386366 601385612 0.000000e+00 915.0
14 TraesCS3D01G347600 chr3A 90.476 336 22 5 64 395 601386866 601386537 3.280000e-118 435.0
15 TraesCS3D01G347600 chr3A 80.936 598 52 31 836 1409 601374687 601374128 1.190000e-112 416.0
16 TraesCS3D01G347600 chr3A 84.988 433 32 20 836 1243 601380841 601380417 1.990000e-110 409.0
17 TraesCS3D01G347600 chr3A 84.636 371 37 10 290 650 601381395 601381035 3.400000e-93 351.0
18 TraesCS3D01G347600 chr3A 86.131 274 27 9 868 1137 601368438 601368172 3.490000e-73 285.0
19 TraesCS3D01G347600 chr3A 89.080 174 11 3 439 605 601386544 601386372 2.160000e-50 209.0
20 TraesCS3D01G347600 chr3A 77.258 299 43 14 840 1137 601342749 601342475 3.700000e-33 152.0
21 TraesCS3D01G347600 chr3A 85.906 149 9 7 685 821 601381034 601380886 4.780000e-32 148.0
22 TraesCS3D01G347600 chr3A 94.382 89 5 0 556 644 601375084 601374996 1.030000e-28 137.0
23 TraesCS3D01G347600 chr3A 94.253 87 4 1 1649 1735 601385634 601385549 4.810000e-27 132.0
24 TraesCS3D01G347600 chr3A 95.522 67 2 1 1728 1793 601385578 601385512 2.920000e-19 106.0
25 TraesCS3D01G347600 chr6A 86.667 210 28 0 1837 2046 85132698 85132907 1.280000e-57 233.0
26 TraesCS3D01G347600 chr5D 90.698 172 16 0 1875 2046 543766900 543767071 1.660000e-56 230.0
27 TraesCS3D01G347600 chr5D 88.571 105 11 1 2046 2150 150445 150548 2.240000e-25 126.0
28 TraesCS3D01G347600 chr5D 93.750 80 5 0 2053 2132 543767056 543767135 1.040000e-23 121.0
29 TraesCS3D01G347600 chr5D 87.629 97 10 2 2046 2141 122275 122370 6.270000e-21 111.0
30 TraesCS3D01G347600 chr5B 91.176 102 9 0 2049 2150 523745331 523745230 2.880000e-29 139.0
31 TraesCS3D01G347600 chr6B 90.625 96 9 0 2055 2150 467912529 467912434 6.230000e-26 128.0
32 TraesCS3D01G347600 chr6B 89.691 97 9 1 2046 2141 45889543 45889639 2.900000e-24 122.0
33 TraesCS3D01G347600 chr6B 88.542 96 11 0 2055 2150 260600821 260600916 1.350000e-22 117.0
34 TraesCS3D01G347600 chr6B 87.368 95 12 0 2056 2150 508995377 508995283 2.260000e-20 110.0
35 TraesCS3D01G347600 chr7D 91.209 91 8 0 1956 2046 549540817 549540727 8.060000e-25 124.0
36 TraesCS3D01G347600 chr7D 86.458 96 13 0 2055 2150 162766117 162766022 2.920000e-19 106.0
37 TraesCS3D01G347600 chr2B 84.211 114 13 4 1933 2046 58202016 58201908 2.920000e-19 106.0
38 TraesCS3D01G347600 chr4A 84.615 91 13 1 1922 2011 681831617 681831707 2.940000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G347600 chr3D 459193727 459195876 2149 True 1363.800000 3971 95.348667 1 2150 3 chr3D.!!$R2 2149
1 TraesCS3D01G347600 chr3D 459159530 459160735 1205 True 270.900000 392 89.737000 290 1558 3 chr3D.!!$R1 1268
2 TraesCS3D01G347600 chr3B 606557932 606559757 1825 True 674.666667 1437 90.277667 64 1732 3 chr3B.!!$R3 1668
3 TraesCS3D01G347600 chr3B 606420384 606421609 1225 True 307.900000 599 87.789667 290 1558 3 chr3B.!!$R2 1268
4 TraesCS3D01G347600 chr3A 601385512 601386866 1354 True 359.400000 915 91.638200 64 1793 5 chr3A.!!$R5 1729
5 TraesCS3D01G347600 chr3A 601380417 601381395 978 True 302.666667 409 85.176667 290 1243 3 chr3A.!!$R4 953
6 TraesCS3D01G347600 chr3A 601374128 601375084 956 True 276.500000 416 87.659000 556 1409 2 chr3A.!!$R3 853

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
656 686 0.033228 CTGCTCCCTAATCTGGCTCG 59.967 60.0 0.0 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1963 2526 0.03601 AAGAGCCAAGATCCACCACG 60.036 55.0 0.0 0.0 0.0 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.416260 GGTAGCCGACCGTCATCC 59.584 66.667 0.00 0.00 38.87 3.51
24 25 2.025727 GTAGCCGACCGTCATCCG 59.974 66.667 0.00 0.00 0.00 4.18
25 26 2.438975 TAGCCGACCGTCATCCGT 60.439 61.111 0.00 0.00 33.66 4.69
26 27 2.048023 TAGCCGACCGTCATCCGTT 61.048 57.895 0.00 0.00 33.66 4.44
27 28 1.597797 TAGCCGACCGTCATCCGTTT 61.598 55.000 0.00 0.00 33.66 3.60
28 29 1.153784 GCCGACCGTCATCCGTTTA 60.154 57.895 0.00 0.00 33.66 2.01
29 30 0.737019 GCCGACCGTCATCCGTTTAA 60.737 55.000 0.00 0.00 33.66 1.52
30 31 1.274596 CCGACCGTCATCCGTTTAAG 58.725 55.000 0.00 0.00 33.66 1.85
31 32 1.403249 CCGACCGTCATCCGTTTAAGT 60.403 52.381 0.00 0.00 33.66 2.24
32 33 1.916000 CGACCGTCATCCGTTTAAGTC 59.084 52.381 0.00 0.00 33.66 3.01
33 34 1.916000 GACCGTCATCCGTTTAAGTCG 59.084 52.381 0.00 0.00 33.66 4.18
34 35 0.643820 CCGTCATCCGTTTAAGTCGC 59.356 55.000 0.00 0.00 33.66 5.19
35 36 0.643820 CGTCATCCGTTTAAGTCGCC 59.356 55.000 0.00 0.00 0.00 5.54
36 37 1.004595 GTCATCCGTTTAAGTCGCCC 58.995 55.000 0.00 0.00 0.00 6.13
37 38 0.108041 TCATCCGTTTAAGTCGCCCC 60.108 55.000 0.00 0.00 0.00 5.80
38 39 0.391927 CATCCGTTTAAGTCGCCCCA 60.392 55.000 0.00 0.00 0.00 4.96
39 40 0.544697 ATCCGTTTAAGTCGCCCCAT 59.455 50.000 0.00 0.00 0.00 4.00
40 41 0.325602 TCCGTTTAAGTCGCCCCATT 59.674 50.000 0.00 0.00 0.00 3.16
41 42 1.554160 TCCGTTTAAGTCGCCCCATTA 59.446 47.619 0.00 0.00 0.00 1.90
42 43 1.937899 CCGTTTAAGTCGCCCCATTAG 59.062 52.381 0.00 0.00 0.00 1.73
43 44 2.419021 CCGTTTAAGTCGCCCCATTAGA 60.419 50.000 0.00 0.00 0.00 2.10
44 45 2.864343 CGTTTAAGTCGCCCCATTAGAG 59.136 50.000 0.00 0.00 0.00 2.43
45 46 3.677976 CGTTTAAGTCGCCCCATTAGAGT 60.678 47.826 0.00 0.00 0.00 3.24
46 47 4.259356 GTTTAAGTCGCCCCATTAGAGTT 58.741 43.478 0.00 0.00 0.00 3.01
47 48 4.563140 TTAAGTCGCCCCATTAGAGTTT 57.437 40.909 0.00 0.00 0.00 2.66
48 49 2.403252 AGTCGCCCCATTAGAGTTTG 57.597 50.000 0.00 0.00 0.00 2.93
49 50 0.733150 GTCGCCCCATTAGAGTTTGC 59.267 55.000 0.00 0.00 0.00 3.68
50 51 0.618458 TCGCCCCATTAGAGTTTGCT 59.382 50.000 0.00 0.00 0.00 3.91
51 52 1.017387 CGCCCCATTAGAGTTTGCTC 58.983 55.000 0.00 0.00 41.94 4.26
96 97 0.773644 ATGGAGTTGTGGAGTTGGCT 59.226 50.000 0.00 0.00 0.00 4.75
149 150 1.068541 GGATGACGCTCCAACCAAAAC 60.069 52.381 0.00 0.00 35.24 2.43
189 190 3.000819 CCCACCGGAGCCTGTACA 61.001 66.667 9.46 0.00 0.00 2.90
278 279 2.352032 GCCACTCCCTCGTGCTAGT 61.352 63.158 0.00 0.00 33.60 2.57
283 288 1.304134 TCCCTCGTGCTAGTCTGCA 60.304 57.895 0.00 0.00 41.05 4.41
352 361 4.747605 GGGCGTTAATCTGAATCTCTCTTC 59.252 45.833 0.00 0.00 0.00 2.87
357 366 7.138736 CGTTAATCTGAATCTCTCTTCCTCTC 58.861 42.308 0.00 0.00 0.00 3.20
358 367 7.013274 CGTTAATCTGAATCTCTCTTCCTCTCT 59.987 40.741 0.00 0.00 0.00 3.10
359 368 6.966534 AATCTGAATCTCTCTTCCTCTCTC 57.033 41.667 0.00 0.00 0.00 3.20
360 369 4.450976 TCTGAATCTCTCTTCCTCTCTCG 58.549 47.826 0.00 0.00 0.00 4.04
361 370 4.163268 TCTGAATCTCTCTTCCTCTCTCGA 59.837 45.833 0.00 0.00 0.00 4.04
362 371 5.047566 TGAATCTCTCTTCCTCTCTCGAT 57.952 43.478 0.00 0.00 0.00 3.59
371 385 0.941542 CCTCTCTCGATCGACAGGTC 59.058 60.000 18.58 0.00 0.00 3.85
401 416 1.683385 GCAATAAACCCTGGCTGGATC 59.317 52.381 12.58 0.00 38.35 3.36
413 432 1.068541 GGCTGGATCCGTTGTTTGTTC 60.069 52.381 7.39 0.00 0.00 3.18
414 433 1.068541 GCTGGATCCGTTGTTTGTTCC 60.069 52.381 7.39 0.00 0.00 3.62
415 434 1.196808 CTGGATCCGTTGTTTGTTCCG 59.803 52.381 7.39 0.00 0.00 4.30
416 435 1.202663 TGGATCCGTTGTTTGTTCCGA 60.203 47.619 7.39 0.00 0.00 4.55
527 547 5.863397 TGCATTACTTAACTCAAAAGCATGC 59.137 36.000 10.51 10.51 40.76 4.06
630 660 3.454375 CCGTCTAATCTAATTGCCACGT 58.546 45.455 0.00 0.00 0.00 4.49
655 685 1.127343 ACTGCTCCCTAATCTGGCTC 58.873 55.000 0.00 0.00 0.00 4.70
656 686 0.033228 CTGCTCCCTAATCTGGCTCG 59.967 60.000 0.00 0.00 0.00 5.03
659 689 1.403814 CTCCCTAATCTGGCTCGTGA 58.596 55.000 0.00 0.00 0.00 4.35
661 691 2.366916 CTCCCTAATCTGGCTCGTGATT 59.633 50.000 0.00 0.00 36.87 2.57
662 692 2.771943 TCCCTAATCTGGCTCGTGATTT 59.228 45.455 0.00 0.00 35.01 2.17
663 693 3.964688 TCCCTAATCTGGCTCGTGATTTA 59.035 43.478 0.00 0.00 35.01 1.40
664 694 4.593206 TCCCTAATCTGGCTCGTGATTTAT 59.407 41.667 0.00 0.00 35.01 1.40
665 695 4.932200 CCCTAATCTGGCTCGTGATTTATC 59.068 45.833 0.00 0.00 35.01 1.75
666 696 5.511373 CCCTAATCTGGCTCGTGATTTATCA 60.511 44.000 0.00 0.00 35.01 2.15
669 699 7.819415 CCTAATCTGGCTCGTGATTTATCATTA 59.181 37.037 0.00 0.00 39.30 1.90
670 700 7.664082 AATCTGGCTCGTGATTTATCATTAG 57.336 36.000 0.00 0.00 39.30 1.73
671 701 6.161855 TCTGGCTCGTGATTTATCATTAGT 57.838 37.500 0.00 0.00 39.30 2.24
673 703 4.982295 TGGCTCGTGATTTATCATTAGTCG 59.018 41.667 0.00 0.00 39.30 4.18
674 704 4.143305 GGCTCGTGATTTATCATTAGTCGC 60.143 45.833 0.00 0.00 39.30 5.19
675 705 4.681942 GCTCGTGATTTATCATTAGTCGCT 59.318 41.667 0.00 0.00 39.30 4.93
676 706 5.856986 GCTCGTGATTTATCATTAGTCGCTA 59.143 40.000 0.00 0.00 39.30 4.26
677 707 6.528423 GCTCGTGATTTATCATTAGTCGCTAT 59.472 38.462 0.00 0.00 39.30 2.97
708 738 2.825264 GGATGCTTCCCTCCCTCG 59.175 66.667 7.41 0.00 35.84 4.63
730 762 0.110147 CCTCGACGAGTGTCAGTGAC 60.110 60.000 22.61 16.68 45.80 3.67
732 764 1.002792 CTCGACGAGTGTCAGTGACAA 60.003 52.381 27.03 9.31 44.49 3.18
733 765 1.002792 TCGACGAGTGTCAGTGACAAG 60.003 52.381 27.03 21.55 44.49 3.16
734 766 1.268589 CGACGAGTGTCAGTGACAAGT 60.269 52.381 27.03 24.27 44.49 3.16
806 988 7.807907 CGACTCCAAACAAAGCAAACTTATTAT 59.192 33.333 0.00 0.00 34.05 1.28
808 990 9.830975 ACTCCAAACAAAGCAAACTTATTATTT 57.169 25.926 0.00 0.00 34.05 1.40
813 995 7.222000 ACAAAGCAAACTTATTATTTCCGGA 57.778 32.000 0.00 0.00 34.05 5.14
823 1005 1.917336 TATTTCCGGACCCCCAGCAC 61.917 60.000 1.83 0.00 0.00 4.40
858 1075 0.110056 AAAGAAGCACGCGCAATCTG 60.110 50.000 5.73 0.00 42.27 2.90
907 1128 3.062763 CACTATAAATCAGCTCCGCCTG 58.937 50.000 0.00 0.00 0.00 4.85
911 1135 2.753009 AAATCAGCTCCGCCTGCACA 62.753 55.000 0.00 0.00 32.87 4.57
924 1148 0.877071 CTGCACACTCCATCCACAAC 59.123 55.000 0.00 0.00 0.00 3.32
927 1151 0.401738 CACACTCCATCCACAACCCT 59.598 55.000 0.00 0.00 0.00 4.34
931 1155 2.571653 CACTCCATCCACAACCCTTCTA 59.428 50.000 0.00 0.00 0.00 2.10
1170 1443 0.322277 CACCTGAGCAGCCACTCAAT 60.322 55.000 7.60 0.00 45.72 2.57
1202 1475 4.732938 GCAGCATTTTCTCAGCCAATCTAC 60.733 45.833 0.00 0.00 0.00 2.59
1231 1509 3.430236 CGTATGGTCTGGTGCTTGATGTA 60.430 47.826 0.00 0.00 0.00 2.29
1416 1923 6.548251 TGTACGGTGATTGGAGATAGTAATGA 59.452 38.462 0.00 0.00 0.00 2.57
1439 1946 7.326454 TGAGAATTACAGTTCTGATTCTGAGG 58.674 38.462 16.19 0.00 38.56 3.86
1466 1973 2.809601 CTCCCCGCTGTCGTTTCG 60.810 66.667 0.00 0.00 0.00 3.46
1497 2004 4.893524 TGTCCAACTAAGTCTCTGAACTGA 59.106 41.667 0.00 0.00 0.00 3.41
1514 2021 4.428294 ACTGAATACACTGGGATGATGG 57.572 45.455 0.00 0.00 0.00 3.51
1516 2023 3.122480 TGAATACACTGGGATGATGGGT 58.878 45.455 0.00 0.00 0.00 4.51
1517 2024 3.527253 TGAATACACTGGGATGATGGGTT 59.473 43.478 0.00 0.00 0.00 4.11
1518 2025 4.724293 TGAATACACTGGGATGATGGGTTA 59.276 41.667 0.00 0.00 0.00 2.85
1519 2026 4.706842 ATACACTGGGATGATGGGTTAC 57.293 45.455 0.00 0.00 0.00 2.50
1521 2028 1.846439 CACTGGGATGATGGGTTACCT 59.154 52.381 0.00 0.00 37.76 3.08
1578 2141 0.179037 CACTGGGATGATGTGCGGAT 60.179 55.000 0.00 0.00 0.00 4.18
1586 2149 4.460382 GGGATGATGTGCGGATGATATTTT 59.540 41.667 0.00 0.00 0.00 1.82
1630 2193 4.753662 ACTAGGCGAGGCACCGGA 62.754 66.667 9.46 0.00 0.00 5.14
1631 2194 4.208686 CTAGGCGAGGCACCGGAC 62.209 72.222 9.46 0.00 0.00 4.79
1635 2198 3.755628 GCGAGGCACCGGACAGTA 61.756 66.667 9.46 0.00 0.00 2.74
1636 2199 2.967397 CGAGGCACCGGACAGTAA 59.033 61.111 9.46 0.00 0.00 2.24
1637 2200 1.445582 CGAGGCACCGGACAGTAAC 60.446 63.158 9.46 0.00 0.00 2.50
1638 2201 1.079336 GAGGCACCGGACAGTAACC 60.079 63.158 9.46 0.00 0.00 2.85
1639 2202 1.535687 AGGCACCGGACAGTAACCT 60.536 57.895 9.46 0.14 0.00 3.50
1640 2203 1.079336 GGCACCGGACAGTAACCTC 60.079 63.158 9.46 0.00 0.00 3.85
1641 2204 1.542187 GGCACCGGACAGTAACCTCT 61.542 60.000 9.46 0.00 0.00 3.69
1642 2205 0.320697 GCACCGGACAGTAACCTCTT 59.679 55.000 9.46 0.00 0.00 2.85
1643 2206 1.270678 GCACCGGACAGTAACCTCTTT 60.271 52.381 9.46 0.00 0.00 2.52
1644 2207 2.809299 GCACCGGACAGTAACCTCTTTT 60.809 50.000 9.46 0.00 0.00 2.27
1645 2208 3.473625 CACCGGACAGTAACCTCTTTTT 58.526 45.455 9.46 0.00 0.00 1.94
1790 2353 9.995003 TTGTGATCAAAAGTAAATAATTTGGCT 57.005 25.926 0.00 0.00 35.34 4.75
1813 2376 4.431416 TTTTTAGAAGGTGGAGCACAGA 57.569 40.909 0.00 0.00 35.86 3.41
1814 2377 3.685139 TTTAGAAGGTGGAGCACAGAG 57.315 47.619 0.00 0.00 35.86 3.35
1815 2378 1.561643 TAGAAGGTGGAGCACAGAGG 58.438 55.000 0.00 0.00 35.86 3.69
1816 2379 0.178921 AGAAGGTGGAGCACAGAGGA 60.179 55.000 0.00 0.00 35.86 3.71
1817 2380 0.036858 GAAGGTGGAGCACAGAGGAC 60.037 60.000 0.00 0.00 35.86 3.85
1818 2381 1.821061 AAGGTGGAGCACAGAGGACG 61.821 60.000 0.00 0.00 35.86 4.79
1819 2382 2.433318 GTGGAGCACAGAGGACGC 60.433 66.667 0.00 0.00 34.08 5.19
1820 2383 4.056125 TGGAGCACAGAGGACGCG 62.056 66.667 3.53 3.53 0.00 6.01
1821 2384 4.057428 GGAGCACAGAGGACGCGT 62.057 66.667 13.85 13.85 0.00 6.01
1822 2385 2.807045 GAGCACAGAGGACGCGTG 60.807 66.667 20.70 3.72 0.00 5.34
1823 2386 3.559657 GAGCACAGAGGACGCGTGT 62.560 63.158 20.70 4.57 33.13 4.49
1824 2387 2.661866 GCACAGAGGACGCGTGTT 60.662 61.111 20.70 3.47 33.13 3.32
1825 2388 2.943345 GCACAGAGGACGCGTGTTG 61.943 63.158 20.70 11.91 33.13 3.33
1826 2389 1.299850 CACAGAGGACGCGTGTTGA 60.300 57.895 20.70 0.00 0.00 3.18
1827 2390 0.874175 CACAGAGGACGCGTGTTGAA 60.874 55.000 20.70 0.00 0.00 2.69
1828 2391 0.597637 ACAGAGGACGCGTGTTGAAG 60.598 55.000 20.70 4.37 0.00 3.02
1829 2392 0.597637 CAGAGGACGCGTGTTGAAGT 60.598 55.000 20.70 0.00 0.00 3.01
1830 2393 0.956633 AGAGGACGCGTGTTGAAGTA 59.043 50.000 20.70 0.00 0.00 2.24
1831 2394 1.338973 AGAGGACGCGTGTTGAAGTAA 59.661 47.619 20.70 0.00 0.00 2.24
1832 2395 2.129607 GAGGACGCGTGTTGAAGTAAA 58.870 47.619 20.70 0.00 0.00 2.01
1833 2396 2.735134 GAGGACGCGTGTTGAAGTAAAT 59.265 45.455 20.70 0.00 0.00 1.40
1834 2397 3.916761 AGGACGCGTGTTGAAGTAAATA 58.083 40.909 20.70 0.00 0.00 1.40
1835 2398 4.501071 AGGACGCGTGTTGAAGTAAATAT 58.499 39.130 20.70 0.00 0.00 1.28
1836 2399 5.653507 AGGACGCGTGTTGAAGTAAATATA 58.346 37.500 20.70 0.00 0.00 0.86
1837 2400 5.747197 AGGACGCGTGTTGAAGTAAATATAG 59.253 40.000 20.70 0.00 0.00 1.31
1838 2401 5.051240 GGACGCGTGTTGAAGTAAATATAGG 60.051 44.000 20.70 0.00 0.00 2.57
1839 2402 5.653507 ACGCGTGTTGAAGTAAATATAGGA 58.346 37.500 12.93 0.00 0.00 2.94
1840 2403 6.278363 ACGCGTGTTGAAGTAAATATAGGAT 58.722 36.000 12.93 0.00 0.00 3.24
1841 2404 6.759827 ACGCGTGTTGAAGTAAATATAGGATT 59.240 34.615 12.93 0.00 0.00 3.01
1842 2405 7.922278 ACGCGTGTTGAAGTAAATATAGGATTA 59.078 33.333 12.93 0.00 0.00 1.75
1843 2406 8.212495 CGCGTGTTGAAGTAAATATAGGATTAC 58.788 37.037 0.00 0.00 33.25 1.89
1844 2407 8.212495 GCGTGTTGAAGTAAATATAGGATTACG 58.788 37.037 0.00 0.00 37.16 3.18
1845 2408 9.241317 CGTGTTGAAGTAAATATAGGATTACGT 57.759 33.333 0.00 0.00 37.16 3.57
1851 2414 9.327529 GAAGTAAATATAGGATTACGTGACTCG 57.672 37.037 0.00 0.00 46.00 4.18
1852 2415 7.303998 AGTAAATATAGGATTACGTGACTCGC 58.696 38.462 0.00 0.00 44.19 5.03
1853 2416 5.700722 AATATAGGATTACGTGACTCGCA 57.299 39.130 0.00 0.00 44.19 5.10
1854 2417 2.838386 TAGGATTACGTGACTCGCAC 57.162 50.000 0.00 0.00 44.19 5.34
1861 2424 3.733322 GTGACTCGCACGTACGTC 58.267 61.111 19.94 12.42 37.83 4.34
1862 2425 1.206072 GTGACTCGCACGTACGTCT 59.794 57.895 19.94 0.00 37.83 4.18
1863 2426 0.788645 GTGACTCGCACGTACGTCTC 60.789 60.000 19.94 12.31 37.83 3.36
1864 2427 0.947660 TGACTCGCACGTACGTCTCT 60.948 55.000 19.94 0.00 0.00 3.10
1865 2428 0.247223 GACTCGCACGTACGTCTCTC 60.247 60.000 19.94 7.15 0.00 3.20
1866 2429 1.296001 CTCGCACGTACGTCTCTCG 60.296 63.158 19.94 18.26 46.00 4.04
1867 2430 2.276493 CGCACGTACGTCTCTCGG 60.276 66.667 19.94 7.41 44.69 4.63
1868 2431 2.576317 GCACGTACGTCTCTCGGC 60.576 66.667 19.94 14.16 44.69 5.54
1869 2432 3.036783 GCACGTACGTCTCTCGGCT 62.037 63.158 19.94 0.00 44.69 5.52
1870 2433 1.060622 CACGTACGTCTCTCGGCTC 59.939 63.158 19.94 0.00 44.69 4.70
1871 2434 1.375140 ACGTACGTCTCTCGGCTCA 60.375 57.895 16.72 0.00 44.69 4.26
1872 2435 0.743701 ACGTACGTCTCTCGGCTCAT 60.744 55.000 16.72 0.00 44.69 2.90
1873 2436 0.316278 CGTACGTCTCTCGGCTCATG 60.316 60.000 7.22 0.00 44.69 3.07
1874 2437 0.592754 GTACGTCTCTCGGCTCATGC 60.593 60.000 0.00 0.00 44.69 4.06
1875 2438 2.048312 TACGTCTCTCGGCTCATGCG 62.048 60.000 0.00 0.00 44.69 4.73
1876 2439 2.492090 GTCTCTCGGCTCATGCGT 59.508 61.111 0.00 0.00 40.82 5.24
1877 2440 1.587613 GTCTCTCGGCTCATGCGTC 60.588 63.158 0.00 0.00 40.82 5.19
1878 2441 1.750780 TCTCTCGGCTCATGCGTCT 60.751 57.895 0.00 0.00 40.82 4.18
1879 2442 1.299014 CTCTCGGCTCATGCGTCTC 60.299 63.158 0.00 0.00 40.82 3.36
1880 2443 2.653448 CTCGGCTCATGCGTCTCG 60.653 66.667 0.00 0.00 40.82 4.04
1907 2470 3.312404 CGATCCGGATTTGATGCCT 57.688 52.632 20.22 0.00 0.00 4.75
1908 2471 1.151668 CGATCCGGATTTGATGCCTC 58.848 55.000 20.22 1.69 0.00 4.70
1909 2472 1.541015 CGATCCGGATTTGATGCCTCA 60.541 52.381 20.22 0.00 0.00 3.86
1910 2473 1.876156 GATCCGGATTTGATGCCTCAC 59.124 52.381 20.22 0.00 0.00 3.51
1911 2474 0.461870 TCCGGATTTGATGCCTCACG 60.462 55.000 0.00 0.00 0.00 4.35
1912 2475 0.744414 CCGGATTTGATGCCTCACGT 60.744 55.000 0.00 0.00 0.00 4.49
1913 2476 0.374758 CGGATTTGATGCCTCACGTG 59.625 55.000 9.94 9.94 0.00 4.49
1914 2477 1.737838 GGATTTGATGCCTCACGTGA 58.262 50.000 18.88 18.88 0.00 4.35
1915 2478 1.667724 GGATTTGATGCCTCACGTGAG 59.332 52.381 33.87 33.87 41.71 3.51
1916 2479 1.063174 GATTTGATGCCTCACGTGAGC 59.937 52.381 35.09 28.96 40.75 4.26
1917 2480 1.291184 TTTGATGCCTCACGTGAGCG 61.291 55.000 35.09 28.00 40.75 5.03
1918 2481 3.558411 GATGCCTCACGTGAGCGC 61.558 66.667 33.69 33.69 42.83 5.92
1939 2502 4.192000 CGCAGATCGGCTTTGTCT 57.808 55.556 15.92 0.00 33.78 3.41
1940 2503 2.460330 CGCAGATCGGCTTTGTCTT 58.540 52.632 15.92 0.00 33.78 3.01
1941 2504 0.371645 CGCAGATCGGCTTTGTCTTC 59.628 55.000 15.92 0.00 33.78 2.87
1942 2505 1.731720 GCAGATCGGCTTTGTCTTCT 58.268 50.000 10.86 0.00 0.00 2.85
1943 2506 1.396301 GCAGATCGGCTTTGTCTTCTG 59.604 52.381 10.86 0.00 34.98 3.02
1944 2507 2.932622 GCAGATCGGCTTTGTCTTCTGA 60.933 50.000 10.86 0.00 34.00 3.27
1945 2508 2.928757 CAGATCGGCTTTGTCTTCTGAG 59.071 50.000 0.00 0.00 34.00 3.35
1946 2509 2.093764 AGATCGGCTTTGTCTTCTGAGG 60.094 50.000 0.00 0.00 0.00 3.86
1947 2510 0.320771 TCGGCTTTGTCTTCTGAGGC 60.321 55.000 0.00 0.00 0.00 4.70
1948 2511 1.301677 CGGCTTTGTCTTCTGAGGCC 61.302 60.000 0.00 0.00 35.33 5.19
1949 2512 0.037447 GGCTTTGTCTTCTGAGGCCT 59.963 55.000 3.86 3.86 35.73 5.19
1950 2513 1.546548 GGCTTTGTCTTCTGAGGCCTT 60.547 52.381 6.77 0.00 35.73 4.35
1951 2514 2.290323 GGCTTTGTCTTCTGAGGCCTTA 60.290 50.000 6.77 0.00 35.73 2.69
1952 2515 3.006247 GCTTTGTCTTCTGAGGCCTTAG 58.994 50.000 18.41 18.41 0.00 2.18
1953 2516 3.604582 CTTTGTCTTCTGAGGCCTTAGG 58.395 50.000 23.40 9.38 0.00 2.69
1954 2517 1.573108 TGTCTTCTGAGGCCTTAGGG 58.427 55.000 23.40 16.22 0.00 3.53
1964 2527 4.147701 CCTTAGGGCATGAAGGCG 57.852 61.111 0.00 0.00 45.36 5.52
1965 2528 1.224592 CCTTAGGGCATGAAGGCGT 59.775 57.895 0.00 0.00 45.36 5.68
1966 2529 1.097547 CCTTAGGGCATGAAGGCGTG 61.098 60.000 0.00 0.00 45.36 5.34
1967 2530 1.077787 TTAGGGCATGAAGGCGTGG 60.078 57.895 0.00 0.00 45.36 4.94
1968 2531 1.847798 TTAGGGCATGAAGGCGTGGT 61.848 55.000 0.00 0.00 45.36 4.16
1969 2532 2.535485 TAGGGCATGAAGGCGTGGTG 62.535 60.000 0.00 0.00 45.36 4.17
1970 2533 3.443045 GGCATGAAGGCGTGGTGG 61.443 66.667 0.00 0.00 33.57 4.61
1971 2534 2.359850 GCATGAAGGCGTGGTGGA 60.360 61.111 0.00 0.00 0.00 4.02
1972 2535 1.750399 GCATGAAGGCGTGGTGGAT 60.750 57.895 0.00 0.00 0.00 3.41
1973 2536 1.718757 GCATGAAGGCGTGGTGGATC 61.719 60.000 0.00 0.00 0.00 3.36
1974 2537 0.107508 CATGAAGGCGTGGTGGATCT 60.108 55.000 0.00 0.00 0.00 2.75
1975 2538 0.620556 ATGAAGGCGTGGTGGATCTT 59.379 50.000 0.00 0.00 0.00 2.40
1976 2539 0.321564 TGAAGGCGTGGTGGATCTTG 60.322 55.000 0.00 0.00 0.00 3.02
1977 2540 1.002134 AAGGCGTGGTGGATCTTGG 60.002 57.895 0.00 0.00 0.00 3.61
1978 2541 3.134127 GGCGTGGTGGATCTTGGC 61.134 66.667 0.00 0.00 0.00 4.52
1979 2542 2.045926 GCGTGGTGGATCTTGGCT 60.046 61.111 0.00 0.00 0.00 4.75
1980 2543 2.109126 GCGTGGTGGATCTTGGCTC 61.109 63.158 0.00 0.00 0.00 4.70
1981 2544 1.599047 CGTGGTGGATCTTGGCTCT 59.401 57.895 0.00 0.00 0.00 4.09
1982 2545 0.036010 CGTGGTGGATCTTGGCTCTT 60.036 55.000 0.00 0.00 0.00 2.85
1983 2546 1.457346 GTGGTGGATCTTGGCTCTTG 58.543 55.000 0.00 0.00 0.00 3.02
1984 2547 0.322816 TGGTGGATCTTGGCTCTTGC 60.323 55.000 0.00 0.00 38.76 4.01
1994 2557 4.785453 GCTCTTGCCGGTGGGAGG 62.785 72.222 1.90 0.00 34.06 4.30
1995 2558 4.101448 CTCTTGCCGGTGGGAGGG 62.101 72.222 1.90 0.00 34.06 4.30
2007 2570 3.394836 GGAGGGCTCCTGCTTCGT 61.395 66.667 5.65 0.00 46.16 3.85
2008 2571 2.665603 GAGGGCTCCTGCTTCGTT 59.334 61.111 0.00 0.00 39.59 3.85
2009 2572 1.003233 GAGGGCTCCTGCTTCGTTT 60.003 57.895 0.00 0.00 39.59 3.60
2010 2573 0.606673 GAGGGCTCCTGCTTCGTTTT 60.607 55.000 0.00 0.00 39.59 2.43
2011 2574 0.178990 AGGGCTCCTGCTTCGTTTTT 60.179 50.000 0.00 0.00 39.59 1.94
2012 2575 0.039165 GGGCTCCTGCTTCGTTTTTG 60.039 55.000 0.00 0.00 39.59 2.44
2013 2576 0.039165 GGCTCCTGCTTCGTTTTTGG 60.039 55.000 0.00 0.00 39.59 3.28
2014 2577 0.951558 GCTCCTGCTTCGTTTTTGGA 59.048 50.000 0.00 0.00 36.03 3.53
2015 2578 1.068954 GCTCCTGCTTCGTTTTTGGAG 60.069 52.381 0.00 0.00 42.68 3.86
2016 2579 2.494059 CTCCTGCTTCGTTTTTGGAGA 58.506 47.619 0.00 0.00 42.48 3.71
2017 2580 3.077359 CTCCTGCTTCGTTTTTGGAGAT 58.923 45.455 0.00 0.00 42.48 2.75
2018 2581 3.486383 TCCTGCTTCGTTTTTGGAGATT 58.514 40.909 0.00 0.00 0.00 2.40
2019 2582 3.888930 TCCTGCTTCGTTTTTGGAGATTT 59.111 39.130 0.00 0.00 0.00 2.17
2020 2583 4.340950 TCCTGCTTCGTTTTTGGAGATTTT 59.659 37.500 0.00 0.00 0.00 1.82
2021 2584 4.681483 CCTGCTTCGTTTTTGGAGATTTTC 59.319 41.667 0.00 0.00 0.00 2.29
2022 2585 4.616953 TGCTTCGTTTTTGGAGATTTTCC 58.383 39.130 0.00 0.00 46.98 3.13
2023 2586 4.340950 TGCTTCGTTTTTGGAGATTTTCCT 59.659 37.500 0.00 0.00 46.92 3.36
2024 2587 4.681483 GCTTCGTTTTTGGAGATTTTCCTG 59.319 41.667 0.00 0.00 46.92 3.86
2025 2588 5.736207 GCTTCGTTTTTGGAGATTTTCCTGT 60.736 40.000 0.00 0.00 46.92 4.00
2026 2589 5.181690 TCGTTTTTGGAGATTTTCCTGTG 57.818 39.130 0.00 0.00 46.92 3.66
2027 2590 4.642885 TCGTTTTTGGAGATTTTCCTGTGT 59.357 37.500 0.00 0.00 46.92 3.72
2028 2591 4.739716 CGTTTTTGGAGATTTTCCTGTGTG 59.260 41.667 0.00 0.00 46.92 3.82
2029 2592 4.320608 TTTTGGAGATTTTCCTGTGTGC 57.679 40.909 0.00 0.00 46.92 4.57
2030 2593 1.522668 TGGAGATTTTCCTGTGTGCG 58.477 50.000 0.00 0.00 46.92 5.34
2031 2594 1.202758 TGGAGATTTTCCTGTGTGCGT 60.203 47.619 0.00 0.00 46.92 5.24
2032 2595 1.880027 GGAGATTTTCCTGTGTGCGTT 59.120 47.619 0.00 0.00 43.16 4.84
2033 2596 2.293399 GGAGATTTTCCTGTGTGCGTTT 59.707 45.455 0.00 0.00 43.16 3.60
2034 2597 3.500680 GGAGATTTTCCTGTGTGCGTTTA 59.499 43.478 0.00 0.00 43.16 2.01
2035 2598 4.378459 GGAGATTTTCCTGTGTGCGTTTAG 60.378 45.833 0.00 0.00 43.16 1.85
2036 2599 3.502211 AGATTTTCCTGTGTGCGTTTAGG 59.498 43.478 0.00 0.00 0.00 2.69
2037 2600 1.600023 TTTCCTGTGTGCGTTTAGGG 58.400 50.000 0.00 0.00 0.00 3.53
2038 2601 0.470766 TTCCTGTGTGCGTTTAGGGT 59.529 50.000 0.00 0.00 0.00 4.34
2039 2602 0.470766 TCCTGTGTGCGTTTAGGGTT 59.529 50.000 0.00 0.00 0.00 4.11
2040 2603 1.134037 TCCTGTGTGCGTTTAGGGTTT 60.134 47.619 0.00 0.00 0.00 3.27
2041 2604 2.104451 TCCTGTGTGCGTTTAGGGTTTA 59.896 45.455 0.00 0.00 0.00 2.01
2042 2605 3.078837 CCTGTGTGCGTTTAGGGTTTAT 58.921 45.455 0.00 0.00 0.00 1.40
2043 2606 3.119990 CCTGTGTGCGTTTAGGGTTTATG 60.120 47.826 0.00 0.00 0.00 1.90
2044 2607 3.478509 TGTGTGCGTTTAGGGTTTATGT 58.521 40.909 0.00 0.00 0.00 2.29
2045 2608 3.884091 TGTGTGCGTTTAGGGTTTATGTT 59.116 39.130 0.00 0.00 0.00 2.71
2046 2609 4.223659 GTGTGCGTTTAGGGTTTATGTTG 58.776 43.478 0.00 0.00 0.00 3.33
2047 2610 4.023878 GTGTGCGTTTAGGGTTTATGTTGA 60.024 41.667 0.00 0.00 0.00 3.18
2048 2611 4.214545 TGTGCGTTTAGGGTTTATGTTGAG 59.785 41.667 0.00 0.00 0.00 3.02
2049 2612 4.214758 GTGCGTTTAGGGTTTATGTTGAGT 59.785 41.667 0.00 0.00 0.00 3.41
2050 2613 4.214545 TGCGTTTAGGGTTTATGTTGAGTG 59.785 41.667 0.00 0.00 0.00 3.51
2051 2614 4.453136 GCGTTTAGGGTTTATGTTGAGTGA 59.547 41.667 0.00 0.00 0.00 3.41
2052 2615 5.390567 GCGTTTAGGGTTTATGTTGAGTGAG 60.391 44.000 0.00 0.00 0.00 3.51
2053 2616 5.699458 CGTTTAGGGTTTATGTTGAGTGAGT 59.301 40.000 0.00 0.00 0.00 3.41
2054 2617 6.204108 CGTTTAGGGTTTATGTTGAGTGAGTT 59.796 38.462 0.00 0.00 0.00 3.01
2055 2618 7.255001 CGTTTAGGGTTTATGTTGAGTGAGTTT 60.255 37.037 0.00 0.00 0.00 2.66
2056 2619 9.059260 GTTTAGGGTTTATGTTGAGTGAGTTTA 57.941 33.333 0.00 0.00 0.00 2.01
2057 2620 8.842358 TTAGGGTTTATGTTGAGTGAGTTTAG 57.158 34.615 0.00 0.00 0.00 1.85
2058 2621 6.238648 AGGGTTTATGTTGAGTGAGTTTAGG 58.761 40.000 0.00 0.00 0.00 2.69
2059 2622 5.414765 GGGTTTATGTTGAGTGAGTTTAGGG 59.585 44.000 0.00 0.00 0.00 3.53
2060 2623 6.002082 GGTTTATGTTGAGTGAGTTTAGGGT 58.998 40.000 0.00 0.00 0.00 4.34
2061 2624 6.489022 GGTTTATGTTGAGTGAGTTTAGGGTT 59.511 38.462 0.00 0.00 0.00 4.11
2062 2625 7.013942 GGTTTATGTTGAGTGAGTTTAGGGTTT 59.986 37.037 0.00 0.00 0.00 3.27
2063 2626 7.504924 TTATGTTGAGTGAGTTTAGGGTTTG 57.495 36.000 0.00 0.00 0.00 2.93
2064 2627 4.850680 TGTTGAGTGAGTTTAGGGTTTGT 58.149 39.130 0.00 0.00 0.00 2.83
2065 2628 4.638421 TGTTGAGTGAGTTTAGGGTTTGTG 59.362 41.667 0.00 0.00 0.00 3.33
2066 2629 4.497291 TGAGTGAGTTTAGGGTTTGTGT 57.503 40.909 0.00 0.00 0.00 3.72
2067 2630 4.850680 TGAGTGAGTTTAGGGTTTGTGTT 58.149 39.130 0.00 0.00 0.00 3.32
2068 2631 4.879545 TGAGTGAGTTTAGGGTTTGTGTTC 59.120 41.667 0.00 0.00 0.00 3.18
2069 2632 5.112129 AGTGAGTTTAGGGTTTGTGTTCT 57.888 39.130 0.00 0.00 0.00 3.01
2070 2633 4.881850 AGTGAGTTTAGGGTTTGTGTTCTG 59.118 41.667 0.00 0.00 0.00 3.02
2071 2634 3.630312 TGAGTTTAGGGTTTGTGTTCTGC 59.370 43.478 0.00 0.00 0.00 4.26
2072 2635 3.883489 GAGTTTAGGGTTTGTGTTCTGCT 59.117 43.478 0.00 0.00 0.00 4.24
2073 2636 3.883489 AGTTTAGGGTTTGTGTTCTGCTC 59.117 43.478 0.00 0.00 0.00 4.26
2074 2637 3.569194 TTAGGGTTTGTGTTCTGCTCA 57.431 42.857 0.00 0.00 0.00 4.26
2075 2638 2.664402 AGGGTTTGTGTTCTGCTCAT 57.336 45.000 0.00 0.00 0.00 2.90
2076 2639 2.949447 AGGGTTTGTGTTCTGCTCATT 58.051 42.857 0.00 0.00 0.00 2.57
2077 2640 4.098914 AGGGTTTGTGTTCTGCTCATTA 57.901 40.909 0.00 0.00 0.00 1.90
2078 2641 4.469657 AGGGTTTGTGTTCTGCTCATTAA 58.530 39.130 0.00 0.00 0.00 1.40
2079 2642 4.520492 AGGGTTTGTGTTCTGCTCATTAAG 59.480 41.667 0.00 0.00 0.00 1.85
2080 2643 4.518970 GGGTTTGTGTTCTGCTCATTAAGA 59.481 41.667 0.00 0.00 0.00 2.10
2081 2644 5.452777 GGTTTGTGTTCTGCTCATTAAGAC 58.547 41.667 0.00 0.00 0.00 3.01
2082 2645 4.990543 TTGTGTTCTGCTCATTAAGACG 57.009 40.909 0.00 0.00 0.00 4.18
2083 2646 4.251543 TGTGTTCTGCTCATTAAGACGA 57.748 40.909 0.00 0.00 0.00 4.20
2084 2647 4.237724 TGTGTTCTGCTCATTAAGACGAG 58.762 43.478 0.00 0.00 0.00 4.18
2085 2648 4.022329 TGTGTTCTGCTCATTAAGACGAGA 60.022 41.667 0.00 0.00 0.00 4.04
2086 2649 4.324936 GTGTTCTGCTCATTAAGACGAGAC 59.675 45.833 0.00 0.00 0.00 3.36
2087 2650 3.406728 TCTGCTCATTAAGACGAGACG 57.593 47.619 0.00 0.00 0.00 4.18
2088 2651 2.097629 TCTGCTCATTAAGACGAGACGG 59.902 50.000 0.00 1.91 0.00 4.79
2089 2652 1.201343 GCTCATTAAGACGAGACGGC 58.799 55.000 0.00 0.00 33.59 5.68
2090 2653 1.467875 CTCATTAAGACGAGACGGCG 58.532 55.000 4.80 4.80 41.28 6.46
2091 2654 0.099968 TCATTAAGACGAGACGGCGG 59.900 55.000 13.24 0.00 41.28 6.13
2092 2655 1.226888 ATTAAGACGAGACGGCGGC 60.227 57.895 13.24 8.92 41.28 6.53
2093 2656 2.931713 ATTAAGACGAGACGGCGGCG 62.932 60.000 31.06 31.06 45.90 6.46
2106 2669 2.358737 CGGCGGCTTCCTGAAGTT 60.359 61.111 7.61 0.00 40.45 2.66
2107 2670 2.680913 CGGCGGCTTCCTGAAGTTG 61.681 63.158 7.61 3.15 40.45 3.16
2108 2671 2.335712 GGCGGCTTCCTGAAGTTGG 61.336 63.158 0.00 0.49 40.45 3.77
2109 2672 1.302511 GCGGCTTCCTGAAGTTGGA 60.303 57.895 8.57 0.00 40.45 3.53
2110 2673 0.889186 GCGGCTTCCTGAAGTTGGAA 60.889 55.000 8.57 0.00 40.85 3.53
2111 2674 1.826385 CGGCTTCCTGAAGTTGGAAT 58.174 50.000 8.57 0.00 42.03 3.01
2112 2675 2.939640 GCGGCTTCCTGAAGTTGGAATA 60.940 50.000 8.57 0.00 42.03 1.75
2113 2676 3.343617 CGGCTTCCTGAAGTTGGAATAA 58.656 45.455 8.57 0.00 42.03 1.40
2114 2677 3.375299 CGGCTTCCTGAAGTTGGAATAAG 59.625 47.826 8.57 0.00 42.03 1.73
2115 2678 3.696548 GGCTTCCTGAAGTTGGAATAAGG 59.303 47.826 8.57 0.00 42.03 2.69
2116 2679 4.336280 GCTTCCTGAAGTTGGAATAAGGT 58.664 43.478 8.57 0.00 42.03 3.50
2117 2680 4.767409 GCTTCCTGAAGTTGGAATAAGGTT 59.233 41.667 8.57 0.00 42.03 3.50
2118 2681 5.106118 GCTTCCTGAAGTTGGAATAAGGTTC 60.106 44.000 8.57 0.00 42.03 3.62
2119 2682 5.843019 TCCTGAAGTTGGAATAAGGTTCT 57.157 39.130 0.00 0.00 0.00 3.01
2120 2683 5.805728 TCCTGAAGTTGGAATAAGGTTCTC 58.194 41.667 0.00 0.00 0.00 2.87
2121 2684 4.944317 CCTGAAGTTGGAATAAGGTTCTCC 59.056 45.833 0.00 0.00 0.00 3.71
2122 2685 4.918588 TGAAGTTGGAATAAGGTTCTCCC 58.081 43.478 0.00 0.00 0.00 4.30
2123 2686 4.263771 TGAAGTTGGAATAAGGTTCTCCCC 60.264 45.833 0.00 0.00 0.00 4.81
2124 2687 2.238898 AGTTGGAATAAGGTTCTCCCCG 59.761 50.000 0.00 0.00 0.00 5.73
2125 2688 0.544697 TGGAATAAGGTTCTCCCCGC 59.455 55.000 0.00 0.00 0.00 6.13
2126 2689 0.179026 GGAATAAGGTTCTCCCCGCC 60.179 60.000 0.00 0.00 0.00 6.13
2127 2690 0.837940 GAATAAGGTTCTCCCCGCCT 59.162 55.000 0.00 0.00 0.00 5.52
2128 2691 2.044758 GAATAAGGTTCTCCCCGCCTA 58.955 52.381 0.00 0.00 31.43 3.93
2129 2692 1.718280 ATAAGGTTCTCCCCGCCTAG 58.282 55.000 0.00 0.00 31.43 3.02
2130 2693 0.337428 TAAGGTTCTCCCCGCCTAGT 59.663 55.000 0.00 0.00 31.43 2.57
2131 2694 0.976590 AAGGTTCTCCCCGCCTAGTC 60.977 60.000 0.00 0.00 31.43 2.59
2132 2695 1.381463 GGTTCTCCCCGCCTAGTCT 60.381 63.158 0.00 0.00 0.00 3.24
2133 2696 1.393487 GGTTCTCCCCGCCTAGTCTC 61.393 65.000 0.00 0.00 0.00 3.36
2134 2697 1.076192 TTCTCCCCGCCTAGTCTCC 60.076 63.158 0.00 0.00 0.00 3.71
2135 2698 2.905935 TTCTCCCCGCCTAGTCTCCG 62.906 65.000 0.00 0.00 0.00 4.63
2136 2699 3.717924 CTCCCCGCCTAGTCTCCGT 62.718 68.421 0.00 0.00 0.00 4.69
2137 2700 2.758737 CCCCGCCTAGTCTCCGTT 60.759 66.667 0.00 0.00 0.00 4.44
2138 2701 2.356780 CCCCGCCTAGTCTCCGTTT 61.357 63.158 0.00 0.00 0.00 3.60
2139 2702 1.153628 CCCGCCTAGTCTCCGTTTG 60.154 63.158 0.00 0.00 0.00 2.93
2140 2703 1.153628 CCGCCTAGTCTCCGTTTGG 60.154 63.158 0.00 0.00 0.00 3.28
2141 2704 1.153628 CGCCTAGTCTCCGTTTGGG 60.154 63.158 0.00 0.00 35.24 4.12
2142 2705 1.885163 CGCCTAGTCTCCGTTTGGGT 61.885 60.000 0.00 0.00 37.00 4.51
2143 2706 0.391263 GCCTAGTCTCCGTTTGGGTG 60.391 60.000 0.00 0.00 37.00 4.61
2144 2707 1.263356 CCTAGTCTCCGTTTGGGTGA 58.737 55.000 0.00 0.00 35.98 4.02
2146 2709 3.946907 GTCTCCGTTTGGGTGACG 58.053 61.111 0.00 0.00 46.12 4.35
2147 2710 2.029964 TCTCCGTTTGGGTGACGC 59.970 61.111 0.00 0.00 39.09 5.19
2148 2711 3.411351 CTCCGTTTGGGTGACGCG 61.411 66.667 3.53 3.53 39.09 6.01
2149 2712 4.224274 TCCGTTTGGGTGACGCGT 62.224 61.111 13.85 13.85 39.09 6.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.416260 GGATGACGGTCGGCTACC 59.584 66.667 3.34 0.00 45.77 3.18
7 8 2.025727 CGGATGACGGTCGGCTAC 59.974 66.667 3.34 0.00 39.42 3.58
8 9 1.597797 AAACGGATGACGGTCGGCTA 61.598 55.000 3.34 0.00 45.59 3.93
9 10 1.597797 TAAACGGATGACGGTCGGCT 61.598 55.000 3.34 0.00 45.59 5.52
10 11 0.737019 TTAAACGGATGACGGTCGGC 60.737 55.000 3.34 0.00 45.59 5.54
11 12 1.274596 CTTAAACGGATGACGGTCGG 58.725 55.000 3.34 0.00 45.59 4.79
12 13 1.916000 GACTTAAACGGATGACGGTCG 59.084 52.381 3.34 0.00 45.59 4.79
13 14 1.916000 CGACTTAAACGGATGACGGTC 59.084 52.381 0.00 0.00 45.59 4.79
17 18 1.004595 GGGCGACTTAAACGGATGAC 58.995 55.000 0.00 0.00 0.00 3.06
18 19 0.108041 GGGGCGACTTAAACGGATGA 60.108 55.000 0.00 0.00 0.00 2.92
19 20 0.391927 TGGGGCGACTTAAACGGATG 60.392 55.000 0.00 0.00 0.00 3.51
20 21 0.544697 ATGGGGCGACTTAAACGGAT 59.455 50.000 0.00 0.00 0.00 4.18
21 22 0.325602 AATGGGGCGACTTAAACGGA 59.674 50.000 0.00 0.00 0.00 4.69
22 23 1.937899 CTAATGGGGCGACTTAAACGG 59.062 52.381 0.00 0.00 0.00 4.44
23 24 2.864343 CTCTAATGGGGCGACTTAAACG 59.136 50.000 0.00 0.00 0.00 3.60
24 25 3.870274 ACTCTAATGGGGCGACTTAAAC 58.130 45.455 0.00 0.00 0.00 2.01
25 26 4.563140 AACTCTAATGGGGCGACTTAAA 57.437 40.909 0.00 0.00 0.00 1.52
26 27 4.258543 CAAACTCTAATGGGGCGACTTAA 58.741 43.478 0.00 0.00 0.00 1.85
27 28 3.869065 CAAACTCTAATGGGGCGACTTA 58.131 45.455 0.00 0.00 0.00 2.24
28 29 2.711542 CAAACTCTAATGGGGCGACTT 58.288 47.619 0.00 0.00 0.00 3.01
29 30 1.679032 GCAAACTCTAATGGGGCGACT 60.679 52.381 0.00 0.00 0.00 4.18
30 31 0.733150 GCAAACTCTAATGGGGCGAC 59.267 55.000 0.00 0.00 0.00 5.19
31 32 0.618458 AGCAAACTCTAATGGGGCGA 59.382 50.000 0.00 0.00 0.00 5.54
32 33 1.017387 GAGCAAACTCTAATGGGGCG 58.983 55.000 0.00 0.00 40.03 6.13
42 43 7.070183 CGGTTAAGTTTTCTTAGAGCAAACTC 58.930 38.462 11.13 2.03 42.40 3.01
43 44 6.512903 GCGGTTAAGTTTTCTTAGAGCAAACT 60.513 38.462 6.30 6.30 42.40 2.66
44 45 5.624081 GCGGTTAAGTTTTCTTAGAGCAAAC 59.376 40.000 2.31 2.31 42.40 2.93
45 46 5.297278 TGCGGTTAAGTTTTCTTAGAGCAAA 59.703 36.000 0.00 0.00 42.40 3.68
46 47 4.817464 TGCGGTTAAGTTTTCTTAGAGCAA 59.183 37.500 0.00 0.00 42.40 3.91
47 48 4.212636 GTGCGGTTAAGTTTTCTTAGAGCA 59.787 41.667 0.00 0.00 42.40 4.26
48 49 4.451435 AGTGCGGTTAAGTTTTCTTAGAGC 59.549 41.667 0.00 0.00 42.40 4.09
49 50 5.694910 TCAGTGCGGTTAAGTTTTCTTAGAG 59.305 40.000 0.00 0.00 42.40 2.43
50 51 5.603596 TCAGTGCGGTTAAGTTTTCTTAGA 58.396 37.500 0.00 0.00 42.40 2.10
51 52 5.917541 TCAGTGCGGTTAAGTTTTCTTAG 57.082 39.130 0.00 0.00 42.40 2.18
52 53 5.119588 CGATCAGTGCGGTTAAGTTTTCTTA 59.880 40.000 0.00 0.00 40.91 2.10
53 54 4.084013 CGATCAGTGCGGTTAAGTTTTCTT 60.084 41.667 0.00 0.00 43.24 2.52
54 55 3.432252 CGATCAGTGCGGTTAAGTTTTCT 59.568 43.478 0.00 0.00 0.00 2.52
55 56 3.430895 TCGATCAGTGCGGTTAAGTTTTC 59.569 43.478 0.00 0.00 0.00 2.29
56 57 3.395639 TCGATCAGTGCGGTTAAGTTTT 58.604 40.909 0.00 0.00 0.00 2.43
57 58 3.034721 TCGATCAGTGCGGTTAAGTTT 57.965 42.857 0.00 0.00 0.00 2.66
58 59 2.736144 TCGATCAGTGCGGTTAAGTT 57.264 45.000 0.00 0.00 0.00 2.66
59 60 2.540515 CATCGATCAGTGCGGTTAAGT 58.459 47.619 0.00 0.00 0.00 2.24
60 61 1.860950 CCATCGATCAGTGCGGTTAAG 59.139 52.381 0.00 0.00 0.00 1.85
61 62 1.478916 TCCATCGATCAGTGCGGTTAA 59.521 47.619 0.00 0.00 0.00 2.01
62 63 1.067060 CTCCATCGATCAGTGCGGTTA 59.933 52.381 0.00 0.00 0.00 2.85
149 150 3.569210 TGGTGACTGGTGGCCTGG 61.569 66.667 3.32 0.00 0.00 4.45
186 187 3.159213 TGGGTTCGAGGAGTAGTTGTA 57.841 47.619 0.00 0.00 0.00 2.41
189 190 2.108970 GGATGGGTTCGAGGAGTAGTT 58.891 52.381 0.00 0.00 0.00 2.24
256 257 2.646175 GCACGAGGGAGTGGCAGTA 61.646 63.158 0.00 0.00 42.09 2.74
278 279 2.518112 TTTTGGCGCACCTGCAGA 60.518 55.556 17.39 0.00 42.21 4.26
283 288 2.985847 GCCTCTTTTGGCGCACCT 60.986 61.111 10.83 0.00 43.74 4.00
357 366 2.181426 GACAAGACCTGTCGATCGAG 57.819 55.000 20.09 9.81 44.95 4.04
371 385 3.057315 CAGGGTTTATTGCTGGTGACAAG 60.057 47.826 0.00 0.00 42.06 3.16
401 416 1.096386 TGGGTCGGAACAAACAACGG 61.096 55.000 0.00 0.00 0.00 4.44
413 432 1.066454 GAAACAAAAGTGGTGGGTCGG 59.934 52.381 0.00 0.00 0.00 4.79
414 433 1.268335 CGAAACAAAAGTGGTGGGTCG 60.268 52.381 0.00 0.00 0.00 4.79
415 434 1.746787 ACGAAACAAAAGTGGTGGGTC 59.253 47.619 0.00 0.00 0.00 4.46
416 435 1.474879 CACGAAACAAAAGTGGTGGGT 59.525 47.619 0.00 0.00 32.68 4.51
527 547 4.913335 TCTATCGTTAGTGCTAAGTGGG 57.087 45.455 0.63 0.00 0.00 4.61
630 660 4.444876 GCCAGATTAGGGAGCAGTTAATCA 60.445 45.833 10.72 0.00 36.64 2.57
655 685 7.568267 ACATAGCGACTAATGATAAATCACG 57.432 36.000 0.00 0.00 40.03 4.35
659 689 9.587772 GGACATACATAGCGACTAATGATAAAT 57.412 33.333 0.00 0.00 0.00 1.40
661 691 8.349568 AGGACATACATAGCGACTAATGATAA 57.650 34.615 0.00 0.00 0.00 1.75
662 692 7.939784 AGGACATACATAGCGACTAATGATA 57.060 36.000 0.00 0.00 0.00 2.15
663 693 6.842437 AGGACATACATAGCGACTAATGAT 57.158 37.500 0.00 0.00 0.00 2.45
664 694 6.264518 TGAAGGACATACATAGCGACTAATGA 59.735 38.462 0.00 0.00 0.00 2.57
665 695 6.363626 GTGAAGGACATACATAGCGACTAATG 59.636 42.308 0.00 0.00 0.00 1.90
666 696 6.448006 GTGAAGGACATACATAGCGACTAAT 58.552 40.000 0.00 0.00 0.00 1.73
669 699 3.243101 CGTGAAGGACATACATAGCGACT 60.243 47.826 0.00 0.00 0.00 4.18
670 700 3.043586 CGTGAAGGACATACATAGCGAC 58.956 50.000 0.00 0.00 0.00 5.19
671 701 2.034179 CCGTGAAGGACATACATAGCGA 59.966 50.000 0.00 0.00 45.00 4.93
673 703 3.728076 TCCGTGAAGGACATACATAGC 57.272 47.619 0.00 0.00 45.98 2.97
708 738 1.135731 CTGACACTCGTCGAGGAGC 59.864 63.158 29.76 16.98 45.80 4.70
730 762 0.441533 GCGTGCAGAGTCATCACTTG 59.558 55.000 11.38 1.26 30.63 3.16
732 764 0.668706 GTGCGTGCAGAGTCATCACT 60.669 55.000 11.38 0.00 34.57 3.41
733 765 1.630244 GGTGCGTGCAGAGTCATCAC 61.630 60.000 0.00 0.00 0.00 3.06
734 766 1.374631 GGTGCGTGCAGAGTCATCA 60.375 57.895 0.00 0.00 0.00 3.07
806 988 3.961414 GTGCTGGGGGTCCGGAAA 61.961 66.667 5.23 0.00 42.08 3.13
823 1005 4.738252 GCTTCTTTGTTTGTTTACTTCCCG 59.262 41.667 0.00 0.00 0.00 5.14
824 1006 5.518847 GTGCTTCTTTGTTTGTTTACTTCCC 59.481 40.000 0.00 0.00 0.00 3.97
825 1007 5.229260 CGTGCTTCTTTGTTTGTTTACTTCC 59.771 40.000 0.00 0.00 0.00 3.46
827 1009 4.561213 GCGTGCTTCTTTGTTTGTTTACTT 59.439 37.500 0.00 0.00 0.00 2.24
858 1075 4.713854 TTTTAAGCACGTTCCGTTAGTC 57.286 40.909 0.00 0.00 38.32 2.59
907 1128 1.244019 GGGTTGTGGATGGAGTGTGC 61.244 60.000 0.00 0.00 0.00 4.57
911 1135 1.747444 AGAAGGGTTGTGGATGGAGT 58.253 50.000 0.00 0.00 0.00 3.85
924 1148 0.394565 CAGGGAAGGCGATAGAAGGG 59.605 60.000 0.00 0.00 39.76 3.95
945 1174 1.388547 TTCAAGTGGTGGCTTGTGTC 58.611 50.000 5.84 0.00 44.41 3.67
1154 1427 1.370609 CTGATTGAGTGGCTGCTCAG 58.629 55.000 11.01 0.00 45.03 3.35
1170 1443 0.604578 GAAAATGCTGCTTGCCCTGA 59.395 50.000 0.00 0.00 42.00 3.86
1202 1475 2.604855 GCACCAGACCATACGATACTCG 60.605 54.545 0.00 0.00 46.93 4.18
1231 1509 0.623723 AACCTGCACAATCCCGGTAT 59.376 50.000 0.00 0.00 0.00 2.73
1379 1858 4.594123 TCACCGTACATTTCTTCACTCA 57.406 40.909 0.00 0.00 0.00 3.41
1416 1923 7.251321 ACCTCAGAATCAGAACTGTAATTCT 57.749 36.000 10.77 10.77 39.60 2.40
1497 2004 4.141251 GGTAACCCATCATCCCAGTGTATT 60.141 45.833 0.00 0.00 0.00 1.89
1514 2021 1.826720 TGGACATGTACCGAGGTAACC 59.173 52.381 5.38 0.00 31.86 2.85
1516 2023 3.167485 AGTTGGACATGTACCGAGGTAA 58.833 45.455 5.38 0.00 31.86 2.85
1517 2024 2.756760 GAGTTGGACATGTACCGAGGTA 59.243 50.000 5.38 0.00 0.00 3.08
1518 2025 1.549170 GAGTTGGACATGTACCGAGGT 59.451 52.381 5.38 0.00 0.00 3.85
1519 2026 1.825474 AGAGTTGGACATGTACCGAGG 59.175 52.381 5.38 0.00 0.00 4.63
1521 2028 2.521126 TCAGAGTTGGACATGTACCGA 58.479 47.619 5.38 2.96 0.00 4.69
1624 2187 2.833631 AAAGAGGTTACTGTCCGGTG 57.166 50.000 0.00 0.00 0.00 4.94
1643 2206 1.228533 GTTCCGGTACCTCGCAAAAA 58.771 50.000 10.90 0.00 0.00 1.94
1644 2207 0.106335 TGTTCCGGTACCTCGCAAAA 59.894 50.000 10.90 0.00 0.00 2.44
1645 2208 0.320073 CTGTTCCGGTACCTCGCAAA 60.320 55.000 10.90 0.00 0.00 3.68
1646 2209 1.290955 CTGTTCCGGTACCTCGCAA 59.709 57.895 10.90 0.00 0.00 4.85
1647 2210 0.608856 TACTGTTCCGGTACCTCGCA 60.609 55.000 10.90 2.97 0.00 5.10
1648 2211 0.527565 TTACTGTTCCGGTACCTCGC 59.472 55.000 10.90 0.00 0.00 5.03
1649 2212 1.135286 GGTTACTGTTCCGGTACCTCG 60.135 57.143 10.90 0.00 0.00 4.63
1650 2213 2.165234 GAGGTTACTGTTCCGGTACCTC 59.835 54.545 10.90 12.24 36.91 3.85
1651 2214 2.174360 GAGGTTACTGTTCCGGTACCT 58.826 52.381 10.90 7.70 33.10 3.08
1652 2215 1.135286 CGAGGTTACTGTTCCGGTACC 60.135 57.143 8.91 0.16 0.00 3.34
1653 2216 1.541588 ACGAGGTTACTGTTCCGGTAC 59.458 52.381 3.92 3.92 0.00 3.34
1654 2217 1.812571 GACGAGGTTACTGTTCCGGTA 59.187 52.381 0.00 0.00 0.00 4.02
1655 2218 0.600057 GACGAGGTTACTGTTCCGGT 59.400 55.000 0.00 0.00 0.00 5.28
1656 2219 0.455633 CGACGAGGTTACTGTTCCGG 60.456 60.000 0.00 0.00 0.00 5.14
1657 2220 1.069378 GCGACGAGGTTACTGTTCCG 61.069 60.000 0.00 0.00 0.00 4.30
1658 2221 0.038892 TGCGACGAGGTTACTGTTCC 60.039 55.000 0.00 0.00 0.00 3.62
1659 2222 1.654105 CATGCGACGAGGTTACTGTTC 59.346 52.381 0.00 0.00 0.00 3.18
1660 2223 1.271379 TCATGCGACGAGGTTACTGTT 59.729 47.619 0.00 0.00 0.00 3.16
1732 2295 8.662141 GCATTTTCTGACATCTTGCAAATTATT 58.338 29.630 0.00 0.00 0.00 1.40
1733 2296 8.038944 AGCATTTTCTGACATCTTGCAAATTAT 58.961 29.630 0.00 0.00 0.00 1.28
1734 2297 7.380536 AGCATTTTCTGACATCTTGCAAATTA 58.619 30.769 0.00 0.00 0.00 1.40
1735 2298 6.228258 AGCATTTTCTGACATCTTGCAAATT 58.772 32.000 0.00 0.00 0.00 1.82
1736 2299 5.790593 AGCATTTTCTGACATCTTGCAAAT 58.209 33.333 0.00 0.00 0.00 2.32
1737 2300 5.204409 AGCATTTTCTGACATCTTGCAAA 57.796 34.783 0.00 0.00 0.00 3.68
1738 2301 4.859304 AGCATTTTCTGACATCTTGCAA 57.141 36.364 0.00 0.00 0.00 4.08
1739 2302 6.519679 AATAGCATTTTCTGACATCTTGCA 57.480 33.333 0.00 0.00 0.00 4.08
1740 2303 7.823149 AAAATAGCATTTTCTGACATCTTGC 57.177 32.000 0.00 0.00 0.00 4.01
1741 2304 9.199982 ACAAAAATAGCATTTTCTGACATCTTG 57.800 29.630 7.13 3.14 30.31 3.02
1742 2305 9.199982 CACAAAAATAGCATTTTCTGACATCTT 57.800 29.630 7.13 0.00 30.31 2.40
1743 2306 8.579006 TCACAAAAATAGCATTTTCTGACATCT 58.421 29.630 7.13 0.00 30.31 2.90
1744 2307 8.746922 TCACAAAAATAGCATTTTCTGACATC 57.253 30.769 7.13 0.00 30.31 3.06
1745 2308 9.362539 GATCACAAAAATAGCATTTTCTGACAT 57.637 29.630 7.13 6.27 32.51 3.06
1746 2309 8.358895 TGATCACAAAAATAGCATTTTCTGACA 58.641 29.630 0.00 8.57 32.51 3.58
1747 2310 8.746922 TGATCACAAAAATAGCATTTTCTGAC 57.253 30.769 0.00 7.07 32.51 3.51
1748 2311 9.761504 TTTGATCACAAAAATAGCATTTTCTGA 57.238 25.926 0.00 10.05 42.06 3.27
1794 2357 2.303022 CCTCTGTGCTCCACCTTCTAAA 59.697 50.000 0.00 0.00 32.73 1.85
1795 2358 1.902508 CCTCTGTGCTCCACCTTCTAA 59.097 52.381 0.00 0.00 32.73 2.10
1796 2359 1.077169 TCCTCTGTGCTCCACCTTCTA 59.923 52.381 0.00 0.00 32.73 2.10
1797 2360 0.178921 TCCTCTGTGCTCCACCTTCT 60.179 55.000 0.00 0.00 32.73 2.85
1798 2361 0.036858 GTCCTCTGTGCTCCACCTTC 60.037 60.000 0.00 0.00 32.73 3.46
1799 2362 1.821061 CGTCCTCTGTGCTCCACCTT 61.821 60.000 0.00 0.00 32.73 3.50
1800 2363 2.279069 CGTCCTCTGTGCTCCACCT 61.279 63.158 0.00 0.00 32.73 4.00
1801 2364 2.262915 CGTCCTCTGTGCTCCACC 59.737 66.667 0.00 0.00 32.73 4.61
1802 2365 2.433318 GCGTCCTCTGTGCTCCAC 60.433 66.667 0.00 0.00 34.56 4.02
1803 2366 4.056125 CGCGTCCTCTGTGCTCCA 62.056 66.667 0.00 0.00 0.00 3.86
1804 2367 4.057428 ACGCGTCCTCTGTGCTCC 62.057 66.667 5.58 0.00 0.00 4.70
1805 2368 2.807045 CACGCGTCCTCTGTGCTC 60.807 66.667 9.86 0.00 0.00 4.26
1806 2369 3.151958 AACACGCGTCCTCTGTGCT 62.152 57.895 9.86 0.00 37.11 4.40
1807 2370 2.661866 AACACGCGTCCTCTGTGC 60.662 61.111 9.86 0.00 37.11 4.57
1808 2371 0.874175 TTCAACACGCGTCCTCTGTG 60.874 55.000 9.86 0.00 39.47 3.66
1809 2372 0.597637 CTTCAACACGCGTCCTCTGT 60.598 55.000 9.86 0.00 0.00 3.41
1810 2373 0.597637 ACTTCAACACGCGTCCTCTG 60.598 55.000 9.86 4.25 0.00 3.35
1811 2374 0.956633 TACTTCAACACGCGTCCTCT 59.043 50.000 9.86 0.00 0.00 3.69
1812 2375 1.774639 TTACTTCAACACGCGTCCTC 58.225 50.000 9.86 0.00 0.00 3.71
1813 2376 2.228138 TTTACTTCAACACGCGTCCT 57.772 45.000 9.86 0.00 0.00 3.85
1814 2377 4.852609 ATATTTACTTCAACACGCGTCC 57.147 40.909 9.86 0.00 0.00 4.79
1815 2378 5.745294 TCCTATATTTACTTCAACACGCGTC 59.255 40.000 9.86 0.00 0.00 5.19
1816 2379 5.653507 TCCTATATTTACTTCAACACGCGT 58.346 37.500 5.58 5.58 0.00 6.01
1817 2380 6.764877 ATCCTATATTTACTTCAACACGCG 57.235 37.500 3.53 3.53 0.00 6.01
1818 2381 8.212495 CGTAATCCTATATTTACTTCAACACGC 58.788 37.037 0.00 0.00 0.00 5.34
1819 2382 9.241317 ACGTAATCCTATATTTACTTCAACACG 57.759 33.333 0.00 0.00 0.00 4.49
1825 2388 9.327529 CGAGTCACGTAATCCTATATTTACTTC 57.672 37.037 0.00 0.00 37.22 3.01
1826 2389 7.806960 GCGAGTCACGTAATCCTATATTTACTT 59.193 37.037 0.00 0.00 44.60 2.24
1827 2390 7.040892 TGCGAGTCACGTAATCCTATATTTACT 60.041 37.037 0.00 0.00 44.60 2.24
1828 2391 7.060403 GTGCGAGTCACGTAATCCTATATTTAC 59.940 40.741 0.00 0.00 44.60 2.01
1829 2392 7.080099 GTGCGAGTCACGTAATCCTATATTTA 58.920 38.462 0.00 0.00 44.60 1.40
1830 2393 5.919141 GTGCGAGTCACGTAATCCTATATTT 59.081 40.000 0.00 0.00 44.60 1.40
1831 2394 5.458891 GTGCGAGTCACGTAATCCTATATT 58.541 41.667 0.00 0.00 44.60 1.28
1832 2395 5.044428 GTGCGAGTCACGTAATCCTATAT 57.956 43.478 0.00 0.00 44.60 0.86
1833 2396 4.478843 GTGCGAGTCACGTAATCCTATA 57.521 45.455 0.00 0.00 44.60 1.31
1834 2397 3.351020 GTGCGAGTCACGTAATCCTAT 57.649 47.619 0.00 0.00 44.60 2.57
1835 2398 2.838386 GTGCGAGTCACGTAATCCTA 57.162 50.000 0.00 0.00 44.60 2.94
1836 2399 3.715854 GTGCGAGTCACGTAATCCT 57.284 52.632 0.00 0.00 44.60 3.24
1844 2407 0.788645 GAGACGTACGTGCGAGTCAC 60.789 60.000 32.30 14.77 42.23 3.67
1845 2408 0.947660 AGAGACGTACGTGCGAGTCA 60.948 55.000 32.30 0.00 36.18 3.41
1846 2409 0.247223 GAGAGACGTACGTGCGAGTC 60.247 60.000 32.30 24.46 35.59 3.36
1847 2410 1.786582 GAGAGACGTACGTGCGAGT 59.213 57.895 32.30 17.99 35.59 4.18
1848 2411 1.296001 CGAGAGACGTACGTGCGAG 60.296 63.158 32.30 12.38 37.22 5.03
1849 2412 2.733671 CCGAGAGACGTACGTGCGA 61.734 63.158 32.30 0.00 40.78 5.10
1850 2413 2.276493 CCGAGAGACGTACGTGCG 60.276 66.667 28.16 24.57 40.78 5.34
1851 2414 2.576317 GCCGAGAGACGTACGTGC 60.576 66.667 28.16 17.82 40.78 5.34
1852 2415 1.060622 GAGCCGAGAGACGTACGTG 59.939 63.158 28.16 11.36 40.78 4.49
1853 2416 0.743701 ATGAGCCGAGAGACGTACGT 60.744 55.000 23.04 23.04 40.78 3.57
1854 2417 0.316278 CATGAGCCGAGAGACGTACG 60.316 60.000 15.01 15.01 40.78 3.67
1855 2418 0.592754 GCATGAGCCGAGAGACGTAC 60.593 60.000 0.00 0.00 40.78 3.67
1856 2419 1.728069 GCATGAGCCGAGAGACGTA 59.272 57.895 0.00 0.00 40.78 3.57
1857 2420 2.492090 GCATGAGCCGAGAGACGT 59.508 61.111 0.00 0.00 40.78 4.34
1858 2421 2.653448 CGCATGAGCCGAGAGACG 60.653 66.667 0.00 0.00 42.18 4.18
1859 2422 1.587613 GACGCATGAGCCGAGAGAC 60.588 63.158 0.00 0.00 37.52 3.36
1860 2423 1.719725 GAGACGCATGAGCCGAGAGA 61.720 60.000 0.00 0.00 37.52 3.10
1861 2424 1.299014 GAGACGCATGAGCCGAGAG 60.299 63.158 0.00 0.00 37.52 3.20
1862 2425 2.801421 GAGACGCATGAGCCGAGA 59.199 61.111 0.00 0.00 37.52 4.04
1863 2426 2.653448 CGAGACGCATGAGCCGAG 60.653 66.667 0.00 0.00 37.52 4.63
1888 2451 4.758488 TGAGGCATCAAATCCGGATCGG 62.758 54.545 19.43 13.12 39.59 4.18
1889 2452 1.151668 GAGGCATCAAATCCGGATCG 58.848 55.000 19.43 12.49 0.00 3.69
1890 2453 1.876156 GTGAGGCATCAAATCCGGATC 59.124 52.381 19.43 3.43 37.14 3.36
1891 2454 1.811558 CGTGAGGCATCAAATCCGGAT 60.812 52.381 12.38 12.38 37.14 4.18
1892 2455 0.461870 CGTGAGGCATCAAATCCGGA 60.462 55.000 6.61 6.61 37.14 5.14
1893 2456 0.744414 ACGTGAGGCATCAAATCCGG 60.744 55.000 0.92 0.00 37.14 5.14
1894 2457 0.374758 CACGTGAGGCATCAAATCCG 59.625 55.000 10.90 4.96 37.14 4.18
1895 2458 1.667724 CTCACGTGAGGCATCAAATCC 59.332 52.381 33.36 0.00 37.14 3.01
1896 2459 1.063174 GCTCACGTGAGGCATCAAATC 59.937 52.381 38.72 19.91 42.29 2.17
1897 2460 1.089920 GCTCACGTGAGGCATCAAAT 58.910 50.000 38.72 0.00 42.29 2.32
1898 2461 1.291184 CGCTCACGTGAGGCATCAAA 61.291 55.000 38.72 7.62 42.29 2.69
1899 2462 1.737735 CGCTCACGTGAGGCATCAA 60.738 57.895 38.72 8.35 42.29 2.57
1900 2463 2.125952 CGCTCACGTGAGGCATCA 60.126 61.111 38.72 9.10 42.29 3.07
1901 2464 3.558411 GCGCTCACGTGAGGCATC 61.558 66.667 38.72 24.45 42.29 3.91
1922 2485 0.371645 GAAGACAAAGCCGATCTGCG 59.628 55.000 3.27 0.00 40.47 5.18
1923 2486 1.396301 CAGAAGACAAAGCCGATCTGC 59.604 52.381 0.04 0.04 0.00 4.26
1924 2487 2.928757 CTCAGAAGACAAAGCCGATCTG 59.071 50.000 0.00 0.00 36.50 2.90
1925 2488 2.093764 CCTCAGAAGACAAAGCCGATCT 60.094 50.000 0.00 0.00 0.00 2.75
1926 2489 2.275318 CCTCAGAAGACAAAGCCGATC 58.725 52.381 0.00 0.00 0.00 3.69
1927 2490 1.677217 GCCTCAGAAGACAAAGCCGAT 60.677 52.381 0.00 0.00 0.00 4.18
1928 2491 0.320771 GCCTCAGAAGACAAAGCCGA 60.321 55.000 0.00 0.00 0.00 5.54
1929 2492 1.301677 GGCCTCAGAAGACAAAGCCG 61.302 60.000 0.00 0.00 0.00 5.52
1930 2493 0.037447 AGGCCTCAGAAGACAAAGCC 59.963 55.000 0.00 0.00 39.25 4.35
1931 2494 1.902938 AAGGCCTCAGAAGACAAAGC 58.097 50.000 5.23 0.00 0.00 3.51
1932 2495 3.604582 CCTAAGGCCTCAGAAGACAAAG 58.395 50.000 5.23 0.00 0.00 2.77
1933 2496 2.305927 CCCTAAGGCCTCAGAAGACAAA 59.694 50.000 5.23 0.00 0.00 2.83
1934 2497 1.909302 CCCTAAGGCCTCAGAAGACAA 59.091 52.381 5.23 0.00 0.00 3.18
1935 2498 1.573108 CCCTAAGGCCTCAGAAGACA 58.427 55.000 5.23 0.00 0.00 3.41
1947 2510 1.097547 CACGCCTTCATGCCCTAAGG 61.098 60.000 6.56 6.56 44.32 2.69
1948 2511 1.097547 CCACGCCTTCATGCCCTAAG 61.098 60.000 0.00 0.00 0.00 2.18
1949 2512 1.077787 CCACGCCTTCATGCCCTAA 60.078 57.895 0.00 0.00 0.00 2.69
1950 2513 2.297895 ACCACGCCTTCATGCCCTA 61.298 57.895 0.00 0.00 0.00 3.53
1951 2514 3.650950 ACCACGCCTTCATGCCCT 61.651 61.111 0.00 0.00 0.00 5.19
1952 2515 3.443045 CACCACGCCTTCATGCCC 61.443 66.667 0.00 0.00 0.00 5.36
1953 2516 3.443045 CCACCACGCCTTCATGCC 61.443 66.667 0.00 0.00 0.00 4.40
1954 2517 1.718757 GATCCACCACGCCTTCATGC 61.719 60.000 0.00 0.00 0.00 4.06
1955 2518 0.107508 AGATCCACCACGCCTTCATG 60.108 55.000 0.00 0.00 0.00 3.07
1956 2519 0.620556 AAGATCCACCACGCCTTCAT 59.379 50.000 0.00 0.00 0.00 2.57
1957 2520 0.321564 CAAGATCCACCACGCCTTCA 60.322 55.000 0.00 0.00 0.00 3.02
1958 2521 1.026718 CCAAGATCCACCACGCCTTC 61.027 60.000 0.00 0.00 0.00 3.46
1959 2522 1.002134 CCAAGATCCACCACGCCTT 60.002 57.895 0.00 0.00 0.00 4.35
1960 2523 2.671070 CCAAGATCCACCACGCCT 59.329 61.111 0.00 0.00 0.00 5.52
1961 2524 3.134127 GCCAAGATCCACCACGCC 61.134 66.667 0.00 0.00 0.00 5.68
1962 2525 2.045926 AGCCAAGATCCACCACGC 60.046 61.111 0.00 0.00 0.00 5.34
1963 2526 0.036010 AAGAGCCAAGATCCACCACG 60.036 55.000 0.00 0.00 0.00 4.94
1964 2527 1.457346 CAAGAGCCAAGATCCACCAC 58.543 55.000 0.00 0.00 0.00 4.16
1965 2528 0.322816 GCAAGAGCCAAGATCCACCA 60.323 55.000 0.00 0.00 33.58 4.17
1966 2529 2.486796 GCAAGAGCCAAGATCCACC 58.513 57.895 0.00 0.00 33.58 4.61
1977 2540 4.785453 CCTCCCACCGGCAAGAGC 62.785 72.222 0.00 0.00 41.10 4.09
1978 2541 4.101448 CCCTCCCACCGGCAAGAG 62.101 72.222 0.00 4.61 0.00 2.85
1991 2554 0.606673 AAAACGAAGCAGGAGCCCTC 60.607 55.000 0.00 0.00 43.56 4.30
1992 2555 0.178990 AAAAACGAAGCAGGAGCCCT 60.179 50.000 0.00 0.00 43.56 5.19
1993 2556 0.039165 CAAAAACGAAGCAGGAGCCC 60.039 55.000 0.00 0.00 43.56 5.19
1994 2557 0.039165 CCAAAAACGAAGCAGGAGCC 60.039 55.000 0.00 0.00 43.56 4.70
1995 2558 0.951558 TCCAAAAACGAAGCAGGAGC 59.048 50.000 0.00 0.00 42.56 4.70
1996 2559 2.494059 TCTCCAAAAACGAAGCAGGAG 58.506 47.619 10.31 10.31 43.05 3.69
1997 2560 2.631160 TCTCCAAAAACGAAGCAGGA 57.369 45.000 0.00 0.00 0.00 3.86
1998 2561 3.923017 AATCTCCAAAAACGAAGCAGG 57.077 42.857 0.00 0.00 0.00 4.85
1999 2562 4.681483 GGAAAATCTCCAAAAACGAAGCAG 59.319 41.667 0.00 0.00 44.67 4.24
2000 2563 4.616953 GGAAAATCTCCAAAAACGAAGCA 58.383 39.130 0.00 0.00 44.67 3.91
2012 2575 1.523758 ACGCACACAGGAAAATCTCC 58.476 50.000 0.00 0.00 45.81 3.71
2013 2576 3.626028 AAACGCACACAGGAAAATCTC 57.374 42.857 0.00 0.00 0.00 2.75
2014 2577 3.502211 CCTAAACGCACACAGGAAAATCT 59.498 43.478 0.00 0.00 0.00 2.40
2015 2578 3.365969 CCCTAAACGCACACAGGAAAATC 60.366 47.826 0.00 0.00 0.00 2.17
2016 2579 2.556622 CCCTAAACGCACACAGGAAAAT 59.443 45.455 0.00 0.00 0.00 1.82
2017 2580 1.950909 CCCTAAACGCACACAGGAAAA 59.049 47.619 0.00 0.00 0.00 2.29
2018 2581 1.134037 ACCCTAAACGCACACAGGAAA 60.134 47.619 0.00 0.00 0.00 3.13
2019 2582 0.470766 ACCCTAAACGCACACAGGAA 59.529 50.000 0.00 0.00 0.00 3.36
2020 2583 0.470766 AACCCTAAACGCACACAGGA 59.529 50.000 0.00 0.00 0.00 3.86
2021 2584 1.314730 AAACCCTAAACGCACACAGG 58.685 50.000 0.00 0.00 0.00 4.00
2022 2585 3.500680 ACATAAACCCTAAACGCACACAG 59.499 43.478 0.00 0.00 0.00 3.66
2023 2586 3.478509 ACATAAACCCTAAACGCACACA 58.521 40.909 0.00 0.00 0.00 3.72
2024 2587 4.023878 TCAACATAAACCCTAAACGCACAC 60.024 41.667 0.00 0.00 0.00 3.82
2025 2588 4.135306 TCAACATAAACCCTAAACGCACA 58.865 39.130 0.00 0.00 0.00 4.57
2026 2589 4.214758 ACTCAACATAAACCCTAAACGCAC 59.785 41.667 0.00 0.00 0.00 5.34
2027 2590 4.214545 CACTCAACATAAACCCTAAACGCA 59.785 41.667 0.00 0.00 0.00 5.24
2028 2591 4.453136 TCACTCAACATAAACCCTAAACGC 59.547 41.667 0.00 0.00 0.00 4.84
2029 2592 5.699458 ACTCACTCAACATAAACCCTAAACG 59.301 40.000 0.00 0.00 0.00 3.60
2030 2593 7.506328 AACTCACTCAACATAAACCCTAAAC 57.494 36.000 0.00 0.00 0.00 2.01
2031 2594 9.280174 CTAAACTCACTCAACATAAACCCTAAA 57.720 33.333 0.00 0.00 0.00 1.85
2032 2595 7.881232 CCTAAACTCACTCAACATAAACCCTAA 59.119 37.037 0.00 0.00 0.00 2.69
2033 2596 7.391620 CCTAAACTCACTCAACATAAACCCTA 58.608 38.462 0.00 0.00 0.00 3.53
2034 2597 6.238648 CCTAAACTCACTCAACATAAACCCT 58.761 40.000 0.00 0.00 0.00 4.34
2035 2598 5.414765 CCCTAAACTCACTCAACATAAACCC 59.585 44.000 0.00 0.00 0.00 4.11
2036 2599 6.002082 ACCCTAAACTCACTCAACATAAACC 58.998 40.000 0.00 0.00 0.00 3.27
2037 2600 7.506328 AACCCTAAACTCACTCAACATAAAC 57.494 36.000 0.00 0.00 0.00 2.01
2038 2601 7.558444 ACAAACCCTAAACTCACTCAACATAAA 59.442 33.333 0.00 0.00 0.00 1.40
2039 2602 7.012894 CACAAACCCTAAACTCACTCAACATAA 59.987 37.037 0.00 0.00 0.00 1.90
2040 2603 6.485313 CACAAACCCTAAACTCACTCAACATA 59.515 38.462 0.00 0.00 0.00 2.29
2041 2604 5.299279 CACAAACCCTAAACTCACTCAACAT 59.701 40.000 0.00 0.00 0.00 2.71
2042 2605 4.638421 CACAAACCCTAAACTCACTCAACA 59.362 41.667 0.00 0.00 0.00 3.33
2043 2606 4.638865 ACACAAACCCTAAACTCACTCAAC 59.361 41.667 0.00 0.00 0.00 3.18
2044 2607 4.850680 ACACAAACCCTAAACTCACTCAA 58.149 39.130 0.00 0.00 0.00 3.02
2045 2608 4.497291 ACACAAACCCTAAACTCACTCA 57.503 40.909 0.00 0.00 0.00 3.41
2046 2609 5.007724 CAGAACACAAACCCTAAACTCACTC 59.992 44.000 0.00 0.00 0.00 3.51
2047 2610 4.881850 CAGAACACAAACCCTAAACTCACT 59.118 41.667 0.00 0.00 0.00 3.41
2048 2611 4.497507 GCAGAACACAAACCCTAAACTCAC 60.498 45.833 0.00 0.00 0.00 3.51
2049 2612 3.630312 GCAGAACACAAACCCTAAACTCA 59.370 43.478 0.00 0.00 0.00 3.41
2050 2613 3.883489 AGCAGAACACAAACCCTAAACTC 59.117 43.478 0.00 0.00 0.00 3.01
2051 2614 3.883489 GAGCAGAACACAAACCCTAAACT 59.117 43.478 0.00 0.00 0.00 2.66
2052 2615 3.630312 TGAGCAGAACACAAACCCTAAAC 59.370 43.478 0.00 0.00 0.00 2.01
2053 2616 3.892284 TGAGCAGAACACAAACCCTAAA 58.108 40.909 0.00 0.00 0.00 1.85
2054 2617 3.569194 TGAGCAGAACACAAACCCTAA 57.431 42.857 0.00 0.00 0.00 2.69
2055 2618 3.788227 ATGAGCAGAACACAAACCCTA 57.212 42.857 0.00 0.00 0.00 3.53
2056 2619 2.664402 ATGAGCAGAACACAAACCCT 57.336 45.000 0.00 0.00 0.00 4.34
2057 2620 4.518970 TCTTAATGAGCAGAACACAAACCC 59.481 41.667 0.00 0.00 0.00 4.11
2058 2621 5.452777 GTCTTAATGAGCAGAACACAAACC 58.547 41.667 0.00 0.00 0.00 3.27
2059 2622 5.050363 TCGTCTTAATGAGCAGAACACAAAC 60.050 40.000 0.00 0.00 0.00 2.93
2060 2623 5.053811 TCGTCTTAATGAGCAGAACACAAA 58.946 37.500 0.00 0.00 0.00 2.83
2061 2624 4.627058 TCGTCTTAATGAGCAGAACACAA 58.373 39.130 0.00 0.00 0.00 3.33
2062 2625 4.022329 TCTCGTCTTAATGAGCAGAACACA 60.022 41.667 0.00 0.00 38.26 3.72
2063 2626 4.324936 GTCTCGTCTTAATGAGCAGAACAC 59.675 45.833 0.00 0.00 38.26 3.32
2064 2627 4.486090 GTCTCGTCTTAATGAGCAGAACA 58.514 43.478 0.00 0.00 38.26 3.18
2065 2628 3.544285 CGTCTCGTCTTAATGAGCAGAAC 59.456 47.826 0.00 0.00 38.26 3.01
2066 2629 3.427638 CCGTCTCGTCTTAATGAGCAGAA 60.428 47.826 0.00 0.00 38.26 3.02
2067 2630 2.097629 CCGTCTCGTCTTAATGAGCAGA 59.902 50.000 0.00 0.00 38.26 4.26
2068 2631 2.455032 CCGTCTCGTCTTAATGAGCAG 58.545 52.381 0.00 0.00 38.26 4.24
2069 2632 1.469251 GCCGTCTCGTCTTAATGAGCA 60.469 52.381 0.00 0.00 38.26 4.26
2070 2633 1.201343 GCCGTCTCGTCTTAATGAGC 58.799 55.000 0.00 0.00 38.26 4.26
2071 2634 1.467875 CGCCGTCTCGTCTTAATGAG 58.532 55.000 0.00 0.00 39.51 2.90
2072 2635 0.099968 CCGCCGTCTCGTCTTAATGA 59.900 55.000 0.00 0.00 0.00 2.57
2073 2636 1.480219 GCCGCCGTCTCGTCTTAATG 61.480 60.000 0.00 0.00 0.00 1.90
2074 2637 1.226888 GCCGCCGTCTCGTCTTAAT 60.227 57.895 0.00 0.00 0.00 1.40
2075 2638 2.180017 GCCGCCGTCTCGTCTTAA 59.820 61.111 0.00 0.00 0.00 1.85
2076 2639 4.170062 CGCCGCCGTCTCGTCTTA 62.170 66.667 0.00 0.00 0.00 2.10
2089 2652 2.358737 AACTTCAGGAAGCCGCCG 60.359 61.111 8.89 0.00 41.99 6.46
2090 2653 2.335712 CCAACTTCAGGAAGCCGCC 61.336 63.158 8.89 0.00 41.99 6.13
2091 2654 0.889186 TTCCAACTTCAGGAAGCCGC 60.889 55.000 8.89 0.00 40.11 6.53
2092 2655 3.322514 TTCCAACTTCAGGAAGCCG 57.677 52.632 8.89 0.80 40.11 5.52
2096 2659 9.599504 GGGAGAACCTTATTCCAACTTCAGGAA 62.600 44.444 0.00 0.00 41.95 3.36
2097 2660 5.280521 GGAGAACCTTATTCCAACTTCAGGA 60.281 44.000 0.00 0.00 0.00 3.86
2098 2661 4.944317 GGAGAACCTTATTCCAACTTCAGG 59.056 45.833 0.00 0.00 0.00 3.86
2099 2662 4.944317 GGGAGAACCTTATTCCAACTTCAG 59.056 45.833 0.00 0.00 35.85 3.02
2100 2663 4.263771 GGGGAGAACCTTATTCCAACTTCA 60.264 45.833 0.00 0.00 40.03 3.02
2101 2664 4.270834 GGGGAGAACCTTATTCCAACTTC 58.729 47.826 0.00 0.00 40.03 3.01
2102 2665 3.308188 CGGGGAGAACCTTATTCCAACTT 60.308 47.826 0.00 0.00 40.03 2.66
2103 2666 2.238898 CGGGGAGAACCTTATTCCAACT 59.761 50.000 0.00 0.00 40.03 3.16
2104 2667 2.640184 CGGGGAGAACCTTATTCCAAC 58.360 52.381 0.00 0.00 40.03 3.77
2105 2668 1.064979 GCGGGGAGAACCTTATTCCAA 60.065 52.381 0.00 0.00 40.03 3.53
2106 2669 0.544697 GCGGGGAGAACCTTATTCCA 59.455 55.000 0.00 0.00 40.03 3.53
2107 2670 0.179026 GGCGGGGAGAACCTTATTCC 60.179 60.000 0.00 0.00 40.03 3.01
2108 2671 0.837940 AGGCGGGGAGAACCTTATTC 59.162 55.000 0.00 0.00 40.03 1.75
2109 2672 2.047830 CTAGGCGGGGAGAACCTTATT 58.952 52.381 0.00 0.00 40.03 1.40
2110 2673 1.062352 ACTAGGCGGGGAGAACCTTAT 60.062 52.381 0.00 0.00 40.03 1.73
2111 2674 0.337428 ACTAGGCGGGGAGAACCTTA 59.663 55.000 0.00 0.00 40.03 2.69
2112 2675 0.976590 GACTAGGCGGGGAGAACCTT 60.977 60.000 0.00 0.00 40.03 3.50
2113 2676 1.381463 GACTAGGCGGGGAGAACCT 60.381 63.158 0.00 0.00 40.03 3.50
2114 2677 1.381463 AGACTAGGCGGGGAGAACC 60.381 63.158 0.00 0.00 39.11 3.62
2115 2678 1.393487 GGAGACTAGGCGGGGAGAAC 61.393 65.000 0.00 0.00 0.00 3.01
2116 2679 1.076192 GGAGACTAGGCGGGGAGAA 60.076 63.158 0.00 0.00 0.00 2.87
2117 2680 2.601868 GGAGACTAGGCGGGGAGA 59.398 66.667 0.00 0.00 0.00 3.71
2118 2681 2.907917 CGGAGACTAGGCGGGGAG 60.908 72.222 0.00 0.00 0.00 4.30
2119 2682 2.793317 AAACGGAGACTAGGCGGGGA 62.793 60.000 0.00 0.00 0.00 4.81
2120 2683 2.356780 AAACGGAGACTAGGCGGGG 61.357 63.158 0.00 0.00 0.00 5.73
2121 2684 1.153628 CAAACGGAGACTAGGCGGG 60.154 63.158 0.00 0.00 0.00 6.13
2122 2685 1.153628 CCAAACGGAGACTAGGCGG 60.154 63.158 0.00 0.00 0.00 6.13
2123 2686 1.153628 CCCAAACGGAGACTAGGCG 60.154 63.158 0.00 0.00 0.00 5.52
2124 2687 0.391263 CACCCAAACGGAGACTAGGC 60.391 60.000 0.00 0.00 34.64 3.93
2125 2688 1.067071 GTCACCCAAACGGAGACTAGG 60.067 57.143 0.00 0.00 45.88 3.02
2126 2689 1.402456 CGTCACCCAAACGGAGACTAG 60.402 57.143 5.09 0.00 46.84 2.57
2127 2690 0.599558 CGTCACCCAAACGGAGACTA 59.400 55.000 5.09 0.00 46.84 2.59
2128 2691 1.366366 CGTCACCCAAACGGAGACT 59.634 57.895 5.09 0.00 46.84 3.24
2129 2692 2.315386 GCGTCACCCAAACGGAGAC 61.315 63.158 0.00 0.00 45.89 3.36
2130 2693 2.029964 GCGTCACCCAAACGGAGA 59.970 61.111 0.00 0.00 40.41 3.71
2131 2694 3.411351 CGCGTCACCCAAACGGAG 61.411 66.667 0.00 0.00 40.41 4.63
2132 2695 4.224274 ACGCGTCACCCAAACGGA 62.224 61.111 5.58 0.00 40.41 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.