Multiple sequence alignment - TraesCS3D01G347400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G347400 chr3D 100.000 1959 0 0 909 2867 459092230 459090272 0.000000e+00 3618.0
1 TraesCS3D01G347400 chr3D 100.000 656 0 0 1 656 459093138 459092483 0.000000e+00 1212.0
2 TraesCS3D01G347400 chr3D 96.667 390 13 0 2349 2738 458183905 458184294 0.000000e+00 649.0
3 TraesCS3D01G347400 chr3D 83.607 183 18 7 2131 2307 459073925 459073749 8.220000e-36 161.0
4 TraesCS3D01G347400 chr3B 86.986 1168 52 33 943 2088 606276068 606274979 0.000000e+00 1223.0
5 TraesCS3D01G347400 chr3B 86.386 404 35 12 942 1345 606172120 606171737 9.500000e-115 424.0
6 TraesCS3D01G347400 chr3B 88.210 229 9 7 2127 2341 606274978 606274754 1.020000e-64 257.0
7 TraesCS3D01G347400 chr3B 82.650 317 24 16 225 541 606276472 606276187 4.740000e-63 252.0
8 TraesCS3D01G347400 chr3B 96.341 82 3 0 2786 2867 606274753 606274672 4.980000e-28 135.0
9 TraesCS3D01G347400 chr3B 90.385 104 6 2 1 104 606277045 606276946 1.790000e-27 134.0
10 TraesCS3D01G347400 chr3B 79.394 165 14 12 2135 2291 606171098 606170946 6.540000e-17 99.0
11 TraesCS3D01G347400 chr3A 86.579 1140 70 27 962 2088 601345707 601344638 0.000000e+00 1181.0
12 TraesCS3D01G347400 chr3A 82.424 495 48 24 942 1422 601331826 601331357 2.070000e-106 396.0
13 TraesCS3D01G347400 chr3A 80.777 489 21 29 177 645 601346188 601345753 5.960000e-82 315.0
14 TraesCS3D01G347400 chr3A 85.577 312 25 11 1654 1948 601330778 601330470 2.770000e-80 309.0
15 TraesCS3D01G347400 chr3A 92.273 220 8 1 2138 2348 601343913 601343694 1.290000e-78 303.0
16 TraesCS3D01G347400 chr3A 79.835 243 18 15 1431 1649 601331315 601331080 6.400000e-32 148.0
17 TraesCS3D01G347400 chr3A 100.000 29 0 0 2117 2145 601344363 601344335 1.000000e-03 54.7
18 TraesCS3D01G347400 chr5D 97.686 389 9 0 2351 2739 255469884 255469496 0.000000e+00 669.0
19 TraesCS3D01G347400 chr5D 96.907 388 12 0 2351 2738 495021812 495022199 0.000000e+00 651.0
20 TraesCS3D01G347400 chr2D 97.172 389 11 0 2351 2739 124470071 124470459 0.000000e+00 658.0
21 TraesCS3D01G347400 chr2D 96.667 390 12 1 2349 2738 595905618 595905230 0.000000e+00 647.0
22 TraesCS3D01G347400 chr6D 96.658 389 13 0 2351 2739 30010297 30009909 0.000000e+00 647.0
23 TraesCS3D01G347400 chr7D 96.410 390 14 0 2351 2740 142684810 142684421 0.000000e+00 643.0
24 TraesCS3D01G347400 chr7D 96.183 393 15 0 2351 2743 421104013 421104405 0.000000e+00 643.0
25 TraesCS3D01G347400 chr4D 96.410 390 14 0 2351 2740 484620627 484620238 0.000000e+00 643.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G347400 chr3D 459090272 459093138 2866 True 2415.000000 3618 100.00000 1 2867 2 chr3D.!!$R2 2866
1 TraesCS3D01G347400 chr3B 606274672 606277045 2373 True 400.200000 1223 88.91440 1 2867 5 chr3B.!!$R2 2866
2 TraesCS3D01G347400 chr3B 606170946 606172120 1174 True 261.500000 424 82.89000 942 2291 2 chr3B.!!$R1 1349
3 TraesCS3D01G347400 chr3A 601343694 601346188 2494 True 463.425000 1181 89.90725 177 2348 4 chr3A.!!$R2 2171
4 TraesCS3D01G347400 chr3A 601330470 601331826 1356 True 284.333333 396 82.61200 942 1948 3 chr3A.!!$R1 1006

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
79 80 0.037326 TGGTCAGTGGATTCGAGTGC 60.037 55.0 0.00 0.0 0.0 4.40 F
1371 1935 0.249155 TTGTCCGAGTGTCCGACAAC 60.249 55.0 1.88 0.0 31.8 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1481 2372 0.042013 CGAGACAGCGATAGACGTCC 60.042 60.0 13.01 0.0 44.6 4.79 R
2455 4396 0.034756 TGTGAGGCGTTGCATAGTGT 59.965 50.0 0.00 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 4.326058 GCACGAAGCAAACGATCG 57.674 55.556 14.88 14.88 44.79 3.69
55 56 1.779061 GCACGAAGCAAACGATCGA 59.221 52.632 24.34 0.00 44.79 3.59
67 68 1.244697 ACGATCGAGCAGTGGTCAGT 61.245 55.000 24.34 12.27 0.00 3.41
79 80 0.037326 TGGTCAGTGGATTCGAGTGC 60.037 55.000 0.00 0.00 0.00 4.40
87 88 1.349627 GATTCGAGTGCGTGCATGG 59.650 57.895 8.27 0.00 38.98 3.66
92 93 1.717937 GAGTGCGTGCATGGATGAC 59.282 57.895 11.06 5.85 0.00 3.06
96 97 2.512286 CGTGCATGGATGACGCCT 60.512 61.111 0.00 0.00 0.00 5.52
97 98 2.816360 CGTGCATGGATGACGCCTG 61.816 63.158 0.00 0.00 0.00 4.85
98 99 2.124612 TGCATGGATGACGCCTGG 60.125 61.111 0.00 0.00 0.00 4.45
99 100 3.589881 GCATGGATGACGCCTGGC 61.590 66.667 9.11 9.11 0.00 4.85
100 101 2.191375 CATGGATGACGCCTGGCT 59.809 61.111 17.92 3.54 0.00 4.75
101 102 2.184830 CATGGATGACGCCTGGCTG 61.185 63.158 17.92 12.68 0.00 4.85
102 103 3.411114 ATGGATGACGCCTGGCTGG 62.411 63.158 17.92 5.98 39.35 4.85
103 104 3.785859 GGATGACGCCTGGCTGGA 61.786 66.667 17.92 0.00 38.35 3.86
104 105 2.507944 GATGACGCCTGGCTGGAT 59.492 61.111 17.92 5.00 38.35 3.41
105 106 1.890979 GATGACGCCTGGCTGGATG 60.891 63.158 17.92 8.01 38.35 3.51
106 107 3.411114 ATGACGCCTGGCTGGATGG 62.411 63.158 17.92 2.00 38.35 3.51
107 108 3.785859 GACGCCTGGCTGGATGGA 61.786 66.667 17.92 0.00 38.35 3.41
108 109 3.329542 GACGCCTGGCTGGATGGAA 62.330 63.158 17.92 0.00 38.35 3.53
109 110 2.515523 CGCCTGGCTGGATGGAAG 60.516 66.667 17.92 0.00 38.35 3.46
110 111 2.832201 GCCTGGCTGGATGGAAGC 60.832 66.667 15.36 0.00 40.06 3.86
111 112 3.004951 CCTGGCTGGATGGAAGCT 58.995 61.111 4.05 0.00 40.64 3.74
118 119 2.832201 GGATGGAAGCTGGCTGGC 60.832 66.667 0.00 0.00 0.00 4.85
120 121 2.362120 ATGGAAGCTGGCTGGCAC 60.362 61.111 0.00 0.00 34.17 5.01
123 124 4.357279 GAAGCTGGCTGGCACCCT 62.357 66.667 0.00 0.00 34.17 4.34
135 136 2.395360 GCACCCTCGCGCAAATACA 61.395 57.895 8.75 0.00 0.00 2.29
136 137 1.917782 GCACCCTCGCGCAAATACAA 61.918 55.000 8.75 0.00 0.00 2.41
137 138 0.732571 CACCCTCGCGCAAATACAAT 59.267 50.000 8.75 0.00 0.00 2.71
138 139 1.132262 CACCCTCGCGCAAATACAATT 59.868 47.619 8.75 0.00 0.00 2.32
141 142 3.440872 ACCCTCGCGCAAATACAATTTTA 59.559 39.130 8.75 0.00 0.00 1.52
145 146 5.971202 CCTCGCGCAAATACAATTTTAGAAT 59.029 36.000 8.75 0.00 0.00 2.40
148 149 8.897457 TCGCGCAAATACAATTTTAGAATTAA 57.103 26.923 8.75 0.00 33.78 1.40
149 150 9.005180 TCGCGCAAATACAATTTTAGAATTAAG 57.995 29.630 8.75 0.00 33.78 1.85
166 167 8.451908 AGAATTAAGATTATTTTGGGACGGAG 57.548 34.615 0.00 0.00 0.00 4.63
167 168 7.502561 AGAATTAAGATTATTTTGGGACGGAGG 59.497 37.037 0.00 0.00 0.00 4.30
170 171 3.136626 AGATTATTTTGGGACGGAGGGAG 59.863 47.826 0.00 0.00 0.00 4.30
171 172 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
172 173 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
173 174 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
174 175 0.616679 TTTGGGACGGAGGGAGTAGG 60.617 60.000 0.00 0.00 0.00 3.18
175 176 2.838693 GGGACGGAGGGAGTAGGC 60.839 72.222 0.00 0.00 0.00 3.93
194 195 2.663520 TTGTAGCCGCACGGTGTG 60.664 61.111 14.56 14.56 37.65 3.82
220 221 4.033817 ACGTACTCGCTGTGATAGTAGTTC 59.966 45.833 0.00 0.00 41.18 3.01
266 639 0.385223 GAGCTGTGCGTTGAGCTTTG 60.385 55.000 0.00 0.00 45.72 2.77
350 723 2.352032 CCTCACCTCCACCGACCTC 61.352 68.421 0.00 0.00 0.00 3.85
372 745 2.158959 ATGTAGTGAGAACGCGCGC 61.159 57.895 32.58 23.91 0.00 6.86
419 793 4.056125 CACACTCGCTCCTCGCCA 62.056 66.667 0.00 0.00 38.27 5.69
420 794 4.057428 ACACTCGCTCCTCGCCAC 62.057 66.667 0.00 0.00 38.27 5.01
423 797 4.200283 CTCGCTCCTCGCCACTCC 62.200 72.222 0.00 0.00 38.27 3.85
425 799 4.803426 CGCTCCTCGCCACTCCAC 62.803 72.222 0.00 0.00 34.21 4.02
426 800 4.459089 GCTCCTCGCCACTCCACC 62.459 72.222 0.00 0.00 0.00 4.61
427 801 2.997315 CTCCTCGCCACTCCACCA 60.997 66.667 0.00 0.00 0.00 4.17
428 802 3.302347 CTCCTCGCCACTCCACCAC 62.302 68.421 0.00 0.00 0.00 4.16
429 803 4.394712 CCTCGCCACTCCACCACC 62.395 72.222 0.00 0.00 0.00 4.61
430 804 3.314331 CTCGCCACTCCACCACCT 61.314 66.667 0.00 0.00 0.00 4.00
431 805 3.596066 CTCGCCACTCCACCACCTG 62.596 68.421 0.00 0.00 0.00 4.00
432 806 4.704833 CGCCACTCCACCACCTGG 62.705 72.222 0.00 0.00 42.29 4.45
471 845 2.357517 CGGCTTGGCACTCGAGTT 60.358 61.111 17.26 0.00 0.00 3.01
472 846 2.383527 CGGCTTGGCACTCGAGTTC 61.384 63.158 17.26 11.67 0.00 3.01
473 847 2.383527 GGCTTGGCACTCGAGTTCG 61.384 63.158 17.26 6.97 41.45 3.95
510 887 4.643387 ACCACGGCCTTGACTGCC 62.643 66.667 11.54 0.00 45.70 4.85
516 893 2.743928 GCCTTGACTGCCTGACCG 60.744 66.667 0.00 0.00 0.00 4.79
517 894 2.743928 CCTTGACTGCCTGACCGC 60.744 66.667 0.00 0.00 0.00 5.68
518 895 2.743928 CTTGACTGCCTGACCGCC 60.744 66.667 0.00 0.00 0.00 6.13
534 912 2.960688 GCCTCCAGTCCACACTCCC 61.961 68.421 0.00 0.00 0.00 4.30
573 975 3.550431 CCTCATCCATCCGGCCGT 61.550 66.667 26.12 2.55 0.00 5.68
637 1039 4.109675 CTTTCCCGGCCCGTCCAT 62.110 66.667 0.85 0.00 34.01 3.41
646 1048 2.680370 GCCCGTCCATTCCCTCCTT 61.680 63.158 0.00 0.00 0.00 3.36
647 1049 1.224592 CCCGTCCATTCCCTCCTTG 59.775 63.158 0.00 0.00 0.00 3.61
648 1050 1.224592 CCGTCCATTCCCTCCTTGG 59.775 63.158 0.00 0.00 0.00 3.61
650 1052 1.452108 GTCCATTCCCTCCTTGGCG 60.452 63.158 0.00 0.00 0.00 5.69
651 1053 1.615124 TCCATTCCCTCCTTGGCGA 60.615 57.895 0.00 0.00 0.00 5.54
654 1056 2.680370 ATTCCCTCCTTGGCGACCC 61.680 63.158 0.00 0.00 0.00 4.46
927 1329 1.904287 CGACCCCATTTGTTTCCTCA 58.096 50.000 0.00 0.00 0.00 3.86
928 1330 2.235016 CGACCCCATTTGTTTCCTCAA 58.765 47.619 0.00 0.00 0.00 3.02
929 1331 2.625790 CGACCCCATTTGTTTCCTCAAA 59.374 45.455 0.00 0.00 40.74 2.69
930 1332 3.068873 CGACCCCATTTGTTTCCTCAAAA 59.931 43.478 0.00 0.00 40.05 2.44
931 1333 4.442192 CGACCCCATTTGTTTCCTCAAAAA 60.442 41.667 0.00 0.00 40.05 1.94
959 1361 2.274645 TGGCGACCCCATTTGCTTG 61.275 57.895 0.00 0.00 39.18 4.01
960 1362 2.573340 GCGACCCCATTTGCTTGG 59.427 61.111 0.00 0.00 36.46 3.61
1002 1408 1.463674 GTGCCAATTCCGTCCTCAAT 58.536 50.000 0.00 0.00 0.00 2.57
1023 1431 2.158623 TGCACACAAACTCCTTCCTCAT 60.159 45.455 0.00 0.00 0.00 2.90
1026 1434 3.499918 CACACAAACTCCTTCCTCATCAC 59.500 47.826 0.00 0.00 0.00 3.06
1027 1435 3.077359 CACAAACTCCTTCCTCATCACC 58.923 50.000 0.00 0.00 0.00 4.02
1028 1436 2.711009 ACAAACTCCTTCCTCATCACCA 59.289 45.455 0.00 0.00 0.00 4.17
1039 1447 3.256960 ATCACCAAGCCACCGGGT 61.257 61.111 6.32 0.00 36.17 5.28
1040 1448 3.268103 ATCACCAAGCCACCGGGTC 62.268 63.158 6.32 0.00 36.17 4.46
1046 1454 2.584391 AAGCCACCGGGTCAGAGAC 61.584 63.158 6.32 0.00 36.17 3.36
1114 1526 2.511373 CCGCAATGTCGGCTAGCA 60.511 61.111 18.24 0.00 43.18 3.49
1211 1623 2.023741 CATCGCCAAGCACATCGC 59.976 61.111 0.00 0.00 42.91 4.58
1345 1763 2.669569 ATCGCCGCAGCAAAGTGT 60.670 55.556 0.00 0.00 39.83 3.55
1346 1764 2.568935 GATCGCCGCAGCAAAGTGTC 62.569 60.000 0.00 0.00 39.83 3.67
1368 1932 1.733399 GCTTGTCCGAGTGTCCGAC 60.733 63.158 0.00 0.00 0.00 4.79
1371 1935 0.249155 TTGTCCGAGTGTCCGACAAC 60.249 55.000 1.88 0.00 31.80 3.32
1402 1967 1.600636 GCTTGCACACCACCTAGCA 60.601 57.895 0.00 0.00 34.79 3.49
1481 2372 0.321671 AGTGATCACCACCTTGACGG 59.678 55.000 22.21 0.00 46.87 4.79
1610 2527 3.272574 TGTACGTACTAGGGAGAGGTG 57.727 52.381 25.12 0.00 0.00 4.00
1613 2530 0.467659 CGTACTAGGGAGAGGTGGGG 60.468 65.000 0.00 0.00 0.00 4.96
1634 2551 5.172205 GGGAAGTATTATCGCCTGATCTTC 58.828 45.833 0.00 0.00 35.99 2.87
1636 2553 5.046950 GGAAGTATTATCGCCTGATCTTCCT 60.047 44.000 11.73 0.00 42.76 3.36
1694 2909 6.017109 AGTGCTAGTGTGGATTAAGTGTTTTG 60.017 38.462 0.00 0.00 0.00 2.44
1715 2930 1.689233 TGGTTCCCCTGATCTCCCG 60.689 63.158 0.00 0.00 0.00 5.14
1764 2982 2.697751 TGTTTGGGGTGAATTTGTCAGG 59.302 45.455 0.00 0.00 36.74 3.86
1768 2986 4.396357 TGGGGTGAATTTGTCAGGTATT 57.604 40.909 0.00 0.00 36.74 1.89
1884 3108 6.663523 CACATAAAGAACTTGGGGAAAGGTAT 59.336 38.462 0.00 0.00 35.31 2.73
1885 3109 6.663523 ACATAAAGAACTTGGGGAAAGGTATG 59.336 38.462 0.00 0.00 35.31 2.39
1886 3110 3.739401 AGAACTTGGGGAAAGGTATGG 57.261 47.619 0.00 0.00 35.31 2.74
1887 3111 2.311841 AGAACTTGGGGAAAGGTATGGG 59.688 50.000 0.00 0.00 35.31 4.00
1888 3112 1.007607 ACTTGGGGAAAGGTATGGGG 58.992 55.000 0.00 0.00 40.51 4.96
1889 3113 0.261696 CTTGGGGAAAGGTATGGGGG 59.738 60.000 0.00 0.00 31.68 5.40
1890 3114 0.480796 TTGGGGAAAGGTATGGGGGT 60.481 55.000 0.00 0.00 0.00 4.95
1891 3115 0.480796 TGGGGAAAGGTATGGGGGTT 60.481 55.000 0.00 0.00 0.00 4.11
1892 3116 0.032515 GGGGAAAGGTATGGGGGTTG 60.033 60.000 0.00 0.00 0.00 3.77
1930 3175 4.215613 GGAGTGTAAAACATGAGTTGACCC 59.784 45.833 0.00 0.00 38.17 4.46
1932 3177 5.385198 AGTGTAAAACATGAGTTGACCCAT 58.615 37.500 0.00 0.00 38.17 4.00
1985 3230 2.546789 GCGCCCAAGCTTATACGTTTAT 59.453 45.455 0.00 0.00 36.60 1.40
2015 3260 2.032030 GTCGGTCCACATGTGTTTCAAG 60.032 50.000 23.79 8.05 0.00 3.02
2088 3335 0.958876 CACCCCTGGCCGAAAGTAAC 60.959 60.000 0.00 0.00 0.00 2.50
2089 3336 1.378119 CCCCTGGCCGAAAGTAACC 60.378 63.158 0.00 0.00 0.00 2.85
2091 3338 1.377229 CCTGGCCGAAAGTAACCCA 59.623 57.895 0.00 0.00 0.00 4.51
2092 3339 0.250989 CCTGGCCGAAAGTAACCCAA 60.251 55.000 0.00 0.00 0.00 4.12
2093 3340 1.611519 CTGGCCGAAAGTAACCCAAA 58.388 50.000 0.00 0.00 0.00 3.28
2094 3341 1.268625 CTGGCCGAAAGTAACCCAAAC 59.731 52.381 0.00 0.00 0.00 2.93
2095 3342 1.133730 TGGCCGAAAGTAACCCAAACT 60.134 47.619 0.00 0.00 0.00 2.66
2098 3345 3.405831 GCCGAAAGTAACCCAAACTACT 58.594 45.455 0.00 0.00 0.00 2.57
2099 3346 3.817084 GCCGAAAGTAACCCAAACTACTT 59.183 43.478 0.00 0.00 39.49 2.24
2101 3348 5.221106 GCCGAAAGTAACCCAAACTACTTTT 60.221 40.000 8.23 0.00 44.48 2.27
2267 4192 6.020440 CGTCAAAAGTGTACTCGACAAAAGTA 60.020 38.462 0.00 0.00 40.66 2.24
2298 4228 1.374343 AATGCATCTGCCACTCTGCG 61.374 55.000 0.00 0.00 41.18 5.18
2300 4230 2.747822 GCATCTGCCACTCTGCGTG 61.748 63.158 0.00 0.00 43.41 5.34
2348 4289 1.541310 TTGCTCGTAGGACCTGTGGG 61.541 60.000 3.53 0.00 38.88 4.61
2349 4290 2.722201 GCTCGTAGGACCTGTGGGG 61.722 68.421 3.53 0.00 41.89 4.96
2350 4291 2.682494 TCGTAGGACCTGTGGGGC 60.682 66.667 3.53 0.00 40.80 5.80
2351 4292 3.000819 CGTAGGACCTGTGGGGCA 61.001 66.667 3.53 0.00 44.19 5.36
2352 4293 2.589157 CGTAGGACCTGTGGGGCAA 61.589 63.158 3.53 0.00 44.19 4.52
2353 4294 1.765074 GTAGGACCTGTGGGGCAAA 59.235 57.895 3.53 0.00 44.19 3.68
2354 4295 0.331616 GTAGGACCTGTGGGGCAAAT 59.668 55.000 3.53 0.00 44.19 2.32
2355 4296 1.080638 TAGGACCTGTGGGGCAAATT 58.919 50.000 3.53 0.00 44.19 1.82
2356 4297 0.190815 AGGACCTGTGGGGCAAATTT 59.809 50.000 0.00 0.00 44.19 1.82
2357 4298 0.321346 GGACCTGTGGGGCAAATTTG 59.679 55.000 14.03 14.03 44.19 2.32
2358 4299 1.337118 GACCTGTGGGGCAAATTTGA 58.663 50.000 22.31 0.00 41.30 2.69
2359 4300 1.000843 GACCTGTGGGGCAAATTTGAC 59.999 52.381 22.31 19.34 41.30 3.18
2371 4312 6.431198 GGCAAATTTGACCTATAGACGAAA 57.569 37.500 22.31 0.00 0.00 3.46
2372 4313 7.027778 GGCAAATTTGACCTATAGACGAAAT 57.972 36.000 22.31 0.00 0.00 2.17
2373 4314 7.132863 GGCAAATTTGACCTATAGACGAAATC 58.867 38.462 22.31 0.00 0.00 2.17
2374 4315 7.201696 GGCAAATTTGACCTATAGACGAAATCA 60.202 37.037 22.31 0.00 0.00 2.57
2375 4316 8.181573 GCAAATTTGACCTATAGACGAAATCAA 58.818 33.333 22.31 0.00 0.00 2.57
2379 4320 9.613428 ATTTGACCTATAGACGAAATCAAATCA 57.387 29.630 0.00 0.00 39.78 2.57
2380 4321 8.420374 TTGACCTATAGACGAAATCAAATCAC 57.580 34.615 0.00 0.00 0.00 3.06
2381 4322 7.552459 TGACCTATAGACGAAATCAAATCACA 58.448 34.615 0.00 0.00 0.00 3.58
2382 4323 7.706607 TGACCTATAGACGAAATCAAATCACAG 59.293 37.037 0.00 0.00 0.00 3.66
2383 4324 7.782049 ACCTATAGACGAAATCAAATCACAGA 58.218 34.615 0.00 0.00 0.00 3.41
2384 4325 8.258007 ACCTATAGACGAAATCAAATCACAGAA 58.742 33.333 0.00 0.00 0.00 3.02
2385 4326 9.265901 CCTATAGACGAAATCAAATCACAGAAT 57.734 33.333 0.00 0.00 0.00 2.40
2387 4328 8.722480 ATAGACGAAATCAAATCACAGAATGA 57.278 30.769 0.00 0.00 43.13 2.57
2388 4329 7.439157 AGACGAAATCAAATCACAGAATGAA 57.561 32.000 0.00 0.00 41.93 2.57
2389 4330 7.301054 AGACGAAATCAAATCACAGAATGAAC 58.699 34.615 0.00 0.00 41.93 3.18
2390 4331 7.173907 AGACGAAATCAAATCACAGAATGAACT 59.826 33.333 0.00 0.00 41.93 3.01
2391 4332 8.322906 ACGAAATCAAATCACAGAATGAACTA 57.677 30.769 0.00 0.00 41.93 2.24
2392 4333 8.950210 ACGAAATCAAATCACAGAATGAACTAT 58.050 29.630 0.00 0.00 41.93 2.12
2393 4334 9.430838 CGAAATCAAATCACAGAATGAACTATC 57.569 33.333 0.00 0.00 41.93 2.08
2394 4335 9.727627 GAAATCAAATCACAGAATGAACTATCC 57.272 33.333 0.00 0.00 41.93 2.59
2395 4336 8.812513 AATCAAATCACAGAATGAACTATCCA 57.187 30.769 0.00 0.00 41.93 3.41
2396 4337 8.991783 ATCAAATCACAGAATGAACTATCCAT 57.008 30.769 0.00 0.00 41.93 3.41
2397 4338 8.217131 TCAAATCACAGAATGAACTATCCATG 57.783 34.615 0.00 0.00 41.93 3.66
2398 4339 8.048514 TCAAATCACAGAATGAACTATCCATGA 58.951 33.333 0.00 0.00 41.93 3.07
2399 4340 8.680001 CAAATCACAGAATGAACTATCCATGAA 58.320 33.333 0.00 0.00 41.93 2.57
2400 4341 8.812513 AATCACAGAATGAACTATCCATGAAA 57.187 30.769 0.00 0.00 41.93 2.69
2401 4342 7.615582 TCACAGAATGAACTATCCATGAAAC 57.384 36.000 0.00 0.00 39.69 2.78
2402 4343 7.397221 TCACAGAATGAACTATCCATGAAACT 58.603 34.615 0.00 0.00 39.69 2.66
2403 4344 8.539544 TCACAGAATGAACTATCCATGAAACTA 58.460 33.333 0.00 0.00 39.69 2.24
2404 4345 9.334947 CACAGAATGAACTATCCATGAAACTAT 57.665 33.333 0.00 0.00 39.69 2.12
2405 4346 9.911788 ACAGAATGAACTATCCATGAAACTATT 57.088 29.630 0.00 0.00 39.69 1.73
2417 4358 2.811431 TGAAACTATTTCACACGGCTGG 59.189 45.455 0.00 0.00 44.21 4.85
2418 4359 1.165270 AACTATTTCACACGGCTGGC 58.835 50.000 0.00 0.00 0.00 4.85
2419 4360 0.676782 ACTATTTCACACGGCTGGCC 60.677 55.000 0.00 0.00 0.00 5.36
2420 4361 0.392998 CTATTTCACACGGCTGGCCT 60.393 55.000 3.32 0.00 0.00 5.19
2421 4362 0.037590 TATTTCACACGGCTGGCCTT 59.962 50.000 3.32 0.00 0.00 4.35
2422 4363 0.827507 ATTTCACACGGCTGGCCTTT 60.828 50.000 3.32 0.00 0.00 3.11
2423 4364 1.040339 TTTCACACGGCTGGCCTTTT 61.040 50.000 3.32 0.00 0.00 2.27
2424 4365 1.040339 TTCACACGGCTGGCCTTTTT 61.040 50.000 3.32 0.00 0.00 1.94
2425 4366 1.300080 CACACGGCTGGCCTTTTTG 60.300 57.895 3.32 0.00 0.00 2.44
2426 4367 1.756561 ACACGGCTGGCCTTTTTGT 60.757 52.632 3.32 0.00 0.00 2.83
2427 4368 1.300080 CACGGCTGGCCTTTTTGTG 60.300 57.895 3.32 2.65 0.00 3.33
2428 4369 1.756561 ACGGCTGGCCTTTTTGTGT 60.757 52.632 3.32 0.00 0.00 3.72
2429 4370 1.300080 CGGCTGGCCTTTTTGTGTG 60.300 57.895 3.32 0.00 0.00 3.82
2430 4371 1.733402 CGGCTGGCCTTTTTGTGTGA 61.733 55.000 3.32 0.00 0.00 3.58
2431 4372 0.249447 GGCTGGCCTTTTTGTGTGAC 60.249 55.000 3.32 0.00 0.00 3.67
2432 4373 0.594796 GCTGGCCTTTTTGTGTGACG 60.595 55.000 3.32 0.00 0.00 4.35
2433 4374 0.594796 CTGGCCTTTTTGTGTGACGC 60.595 55.000 3.32 0.00 0.00 5.19
2434 4375 1.299850 GGCCTTTTTGTGTGACGCC 60.300 57.895 0.00 0.00 0.00 5.68
2435 4376 1.299850 GCCTTTTTGTGTGACGCCC 60.300 57.895 0.00 0.00 0.00 6.13
2436 4377 1.008995 CCTTTTTGTGTGACGCCCG 60.009 57.895 0.00 0.00 0.00 6.13
2437 4378 1.440938 CCTTTTTGTGTGACGCCCGA 61.441 55.000 0.00 0.00 0.00 5.14
2438 4379 0.316689 CTTTTTGTGTGACGCCCGAC 60.317 55.000 0.00 0.00 0.00 4.79
2439 4380 1.025113 TTTTTGTGTGACGCCCGACA 61.025 50.000 0.00 0.00 0.00 4.35
2440 4381 1.707239 TTTTGTGTGACGCCCGACAC 61.707 55.000 14.47 14.47 42.40 3.67
2441 4382 4.934942 TGTGTGACGCCCGACACG 62.935 66.667 15.80 0.00 44.55 4.49
2442 4383 4.634133 GTGTGACGCCCGACACGA 62.634 66.667 15.80 5.46 42.06 4.35
2443 4384 3.902086 TGTGACGCCCGACACGAA 61.902 61.111 15.80 0.31 42.06 3.85
2444 4385 3.103911 GTGACGCCCGACACGAAG 61.104 66.667 7.43 0.00 32.16 3.79
2445 4386 4.351938 TGACGCCCGACACGAAGG 62.352 66.667 0.00 0.00 0.00 3.46
2453 4394 3.712881 GACACGAAGGCGCCACAC 61.713 66.667 31.54 17.81 42.48 3.82
2454 4395 4.235762 ACACGAAGGCGCCACACT 62.236 61.111 31.54 9.96 42.48 3.55
2455 4396 2.048597 CACGAAGGCGCCACACTA 60.049 61.111 31.54 0.00 42.48 2.74
2456 4397 2.048503 ACGAAGGCGCCACACTAC 60.049 61.111 31.54 11.50 42.48 2.73
2457 4398 2.048597 CGAAGGCGCCACACTACA 60.049 61.111 31.54 0.00 0.00 2.74
2458 4399 2.380410 CGAAGGCGCCACACTACAC 61.380 63.158 31.54 8.98 0.00 2.90
2459 4400 1.004918 GAAGGCGCCACACTACACT 60.005 57.895 31.54 0.00 0.00 3.55
2460 4401 0.245539 GAAGGCGCCACACTACACTA 59.754 55.000 31.54 0.00 0.00 2.74
2461 4402 0.902531 AAGGCGCCACACTACACTAT 59.097 50.000 31.54 0.00 0.00 2.12
2462 4403 0.175760 AGGCGCCACACTACACTATG 59.824 55.000 31.54 0.00 0.00 2.23
2463 4404 1.429148 GGCGCCACACTACACTATGC 61.429 60.000 24.80 0.00 0.00 3.14
2464 4405 0.739462 GCGCCACACTACACTATGCA 60.739 55.000 0.00 0.00 0.00 3.96
2465 4406 1.720805 CGCCACACTACACTATGCAA 58.279 50.000 0.00 0.00 0.00 4.08
2466 4407 1.393539 CGCCACACTACACTATGCAAC 59.606 52.381 0.00 0.00 0.00 4.17
2467 4408 1.393539 GCCACACTACACTATGCAACG 59.606 52.381 0.00 0.00 0.00 4.10
2468 4409 1.393539 CCACACTACACTATGCAACGC 59.606 52.381 0.00 0.00 0.00 4.84
2469 4410 1.393539 CACACTACACTATGCAACGCC 59.606 52.381 0.00 0.00 0.00 5.68
2470 4411 1.275291 ACACTACACTATGCAACGCCT 59.725 47.619 0.00 0.00 0.00 5.52
2471 4412 1.927174 CACTACACTATGCAACGCCTC 59.073 52.381 0.00 0.00 0.00 4.70
2472 4413 1.548719 ACTACACTATGCAACGCCTCA 59.451 47.619 0.00 0.00 0.00 3.86
2473 4414 1.927174 CTACACTATGCAACGCCTCAC 59.073 52.381 0.00 0.00 0.00 3.51
2474 4415 0.034756 ACACTATGCAACGCCTCACA 59.965 50.000 0.00 0.00 0.00 3.58
2475 4416 0.723414 CACTATGCAACGCCTCACAG 59.277 55.000 0.00 0.00 0.00 3.66
2476 4417 0.608130 ACTATGCAACGCCTCACAGA 59.392 50.000 0.00 0.00 0.00 3.41
2477 4418 1.208052 ACTATGCAACGCCTCACAGAT 59.792 47.619 0.00 0.00 0.00 2.90
2478 4419 2.430694 ACTATGCAACGCCTCACAGATA 59.569 45.455 0.00 0.00 0.00 1.98
2479 4420 1.945387 ATGCAACGCCTCACAGATAG 58.055 50.000 0.00 0.00 0.00 2.08
2480 4421 0.108186 TGCAACGCCTCACAGATAGG 60.108 55.000 0.00 0.00 37.17 2.57
2486 4427 3.875838 CCTCACAGATAGGCGCTAC 57.124 57.895 7.64 0.00 0.00 3.58
2487 4428 1.032794 CCTCACAGATAGGCGCTACA 58.967 55.000 7.64 0.00 0.00 2.74
2488 4429 1.269309 CCTCACAGATAGGCGCTACAC 60.269 57.143 7.64 0.00 0.00 2.90
2490 4431 0.595053 CACAGATAGGCGCTACACGG 60.595 60.000 7.64 0.58 43.93 4.94
2514 4455 2.261361 TCGCACCCGTGTGATCAG 59.739 61.111 0.90 0.00 45.76 2.90
2515 4456 2.261361 CGCACCCGTGTGATCAGA 59.739 61.111 0.90 0.00 45.76 3.27
2516 4457 1.374125 CGCACCCGTGTGATCAGAA 60.374 57.895 0.90 0.00 45.76 3.02
2517 4458 0.948623 CGCACCCGTGTGATCAGAAA 60.949 55.000 0.90 0.00 45.76 2.52
2518 4459 1.234821 GCACCCGTGTGATCAGAAAA 58.765 50.000 0.90 0.00 45.76 2.29
2519 4460 1.812571 GCACCCGTGTGATCAGAAAAT 59.187 47.619 0.90 0.00 45.76 1.82
2520 4461 2.228822 GCACCCGTGTGATCAGAAAATT 59.771 45.455 0.90 0.00 45.76 1.82
2521 4462 3.438781 GCACCCGTGTGATCAGAAAATTA 59.561 43.478 0.90 0.00 45.76 1.40
2522 4463 4.671766 GCACCCGTGTGATCAGAAAATTAC 60.672 45.833 0.90 0.00 45.76 1.89
2523 4464 4.695455 CACCCGTGTGATCAGAAAATTACT 59.305 41.667 0.00 0.00 45.76 2.24
2524 4465 5.872617 CACCCGTGTGATCAGAAAATTACTA 59.127 40.000 0.00 0.00 45.76 1.82
2525 4466 6.370442 CACCCGTGTGATCAGAAAATTACTAA 59.630 38.462 0.00 0.00 45.76 2.24
2526 4467 6.594159 ACCCGTGTGATCAGAAAATTACTAAG 59.406 38.462 0.00 0.00 0.00 2.18
2527 4468 6.594159 CCCGTGTGATCAGAAAATTACTAAGT 59.406 38.462 0.00 0.00 0.00 2.24
2528 4469 7.201530 CCCGTGTGATCAGAAAATTACTAAGTC 60.202 40.741 0.00 0.00 0.00 3.01
2529 4470 7.330946 CCGTGTGATCAGAAAATTACTAAGTCA 59.669 37.037 0.00 0.00 0.00 3.41
2530 4471 8.376203 CGTGTGATCAGAAAATTACTAAGTCAG 58.624 37.037 0.00 0.00 0.00 3.51
2531 4472 9.209175 GTGTGATCAGAAAATTACTAAGTCAGT 57.791 33.333 0.00 0.00 41.62 3.41
2532 4473 9.208022 TGTGATCAGAAAATTACTAAGTCAGTG 57.792 33.333 0.00 0.00 38.24 3.66
2533 4474 9.209175 GTGATCAGAAAATTACTAAGTCAGTGT 57.791 33.333 0.00 0.00 38.24 3.55
2534 4475 9.208022 TGATCAGAAAATTACTAAGTCAGTGTG 57.792 33.333 0.00 0.00 38.24 3.82
2535 4476 7.421530 TCAGAAAATTACTAAGTCAGTGTGC 57.578 36.000 0.00 0.00 38.24 4.57
2536 4477 6.989759 TCAGAAAATTACTAAGTCAGTGTGCA 59.010 34.615 0.00 0.00 38.24 4.57
2537 4478 7.171508 TCAGAAAATTACTAAGTCAGTGTGCAG 59.828 37.037 0.00 0.00 38.24 4.41
2538 4479 5.613358 AAATTACTAAGTCAGTGTGCAGC 57.387 39.130 0.00 0.00 38.24 5.25
2539 4480 2.347697 TACTAAGTCAGTGTGCAGCG 57.652 50.000 0.00 0.00 38.24 5.18
2540 4481 0.946221 ACTAAGTCAGTGTGCAGCGC 60.946 55.000 0.00 0.00 35.62 5.92
2541 4482 1.630244 CTAAGTCAGTGTGCAGCGCC 61.630 60.000 2.29 0.00 0.00 6.53
2542 4483 2.099652 TAAGTCAGTGTGCAGCGCCT 62.100 55.000 2.29 0.00 0.00 5.52
2543 4484 3.720193 GTCAGTGTGCAGCGCCTG 61.720 66.667 2.29 14.85 34.12 4.85
2544 4485 3.927548 TCAGTGTGCAGCGCCTGA 61.928 61.111 18.04 18.04 32.44 3.86
2545 4486 3.420606 CAGTGTGCAGCGCCTGAG 61.421 66.667 15.59 0.00 32.44 3.35
2546 4487 3.619767 AGTGTGCAGCGCCTGAGA 61.620 61.111 2.29 0.00 32.44 3.27
2547 4488 3.117171 GTGTGCAGCGCCTGAGAG 61.117 66.667 2.29 0.00 32.44 3.20
2557 4498 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
2558 4499 2.105930 CTGAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
2559 4500 2.679996 TGAGAGCTAGGCGCCACA 60.680 61.111 31.54 15.42 40.39 4.17
2560 4501 2.202810 GAGAGCTAGGCGCCACAC 60.203 66.667 31.54 17.11 40.39 3.82
2561 4502 2.681778 AGAGCTAGGCGCCACACT 60.682 61.111 31.54 21.99 40.39 3.55
2562 4503 1.379977 AGAGCTAGGCGCCACACTA 60.380 57.895 31.54 11.42 40.39 2.74
2563 4504 0.757188 AGAGCTAGGCGCCACACTAT 60.757 55.000 31.54 16.52 40.39 2.12
2564 4505 0.959553 GAGCTAGGCGCCACACTATA 59.040 55.000 31.54 10.17 40.39 1.31
2565 4506 0.674534 AGCTAGGCGCCACACTATAC 59.325 55.000 31.54 8.64 40.39 1.47
2566 4507 0.387929 GCTAGGCGCCACACTATACA 59.612 55.000 31.54 0.33 0.00 2.29
2567 4508 1.603172 GCTAGGCGCCACACTATACAG 60.603 57.143 31.54 11.37 0.00 2.74
2568 4509 1.681793 CTAGGCGCCACACTATACAGT 59.318 52.381 31.54 5.27 34.42 3.55
2579 4520 4.563337 CACTATACAGTGTAGCGCCTAA 57.437 45.455 2.29 0.00 46.03 2.69
2580 4521 4.288531 CACTATACAGTGTAGCGCCTAAC 58.711 47.826 2.29 0.00 46.03 2.34
2581 4522 4.036498 CACTATACAGTGTAGCGCCTAACT 59.964 45.833 2.29 1.47 46.03 2.24
2582 4523 3.712091 ATACAGTGTAGCGCCTAACTC 57.288 47.619 2.29 1.11 0.00 3.01
2583 4524 0.531200 ACAGTGTAGCGCCTAACTCC 59.469 55.000 2.29 0.00 0.00 3.85
2584 4525 0.818296 CAGTGTAGCGCCTAACTCCT 59.182 55.000 2.29 0.00 0.00 3.69
2585 4526 2.022195 CAGTGTAGCGCCTAACTCCTA 58.978 52.381 2.29 0.00 0.00 2.94
2586 4527 2.033550 CAGTGTAGCGCCTAACTCCTAG 59.966 54.545 2.29 0.00 0.00 3.02
2593 4534 3.364277 CCTAACTCCTAGGCGTTGC 57.636 57.895 24.37 0.00 41.02 4.17
2594 4535 0.535335 CCTAACTCCTAGGCGTTGCA 59.465 55.000 24.37 7.11 41.02 4.08
2595 4536 1.641577 CTAACTCCTAGGCGTTGCAC 58.358 55.000 24.37 0.00 0.00 4.57
2596 4537 1.204941 CTAACTCCTAGGCGTTGCACT 59.795 52.381 24.37 3.01 0.00 4.40
2597 4538 1.263356 AACTCCTAGGCGTTGCACTA 58.737 50.000 16.33 0.00 0.00 2.74
2598 4539 0.818296 ACTCCTAGGCGTTGCACTAG 59.182 55.000 2.96 2.78 37.12 2.57
2599 4540 0.818296 CTCCTAGGCGTTGCACTAGT 59.182 55.000 2.96 0.00 35.93 2.57
2600 4541 0.530744 TCCTAGGCGTTGCACTAGTG 59.469 55.000 18.93 18.93 35.93 2.74
2610 4551 4.409342 CACTAGTGCAGCGCCTAG 57.591 61.111 10.54 14.52 36.35 3.02
2623 4564 2.187946 CCTAGCTCCCAGGCGTTG 59.812 66.667 0.00 0.00 37.29 4.10
2624 4565 2.512515 CTAGCTCCCAGGCGTTGC 60.513 66.667 0.00 0.00 37.29 4.17
2625 4566 3.315142 CTAGCTCCCAGGCGTTGCA 62.315 63.158 0.00 0.00 37.29 4.08
2626 4567 3.605749 TAGCTCCCAGGCGTTGCAC 62.606 63.158 0.00 0.00 37.29 4.57
2628 4569 2.662596 CTCCCAGGCGTTGCACTA 59.337 61.111 0.00 0.00 0.00 2.74
2629 4570 1.448540 CTCCCAGGCGTTGCACTAG 60.449 63.158 0.00 0.00 0.00 2.57
2630 4571 2.172483 CTCCCAGGCGTTGCACTAGT 62.172 60.000 0.00 0.00 0.00 2.57
2631 4572 2.034879 CCCAGGCGTTGCACTAGTG 61.035 63.158 18.93 18.93 0.00 2.74
2641 4582 2.262603 CACTAGTGCAGCGCCTCA 59.737 61.111 10.54 0.00 0.00 3.86
2642 4583 1.808799 CACTAGTGCAGCGCCTCAG 60.809 63.158 10.54 0.21 0.00 3.35
2643 4584 1.979155 ACTAGTGCAGCGCCTCAGA 60.979 57.895 2.29 0.00 0.00 3.27
2644 4585 1.226916 CTAGTGCAGCGCCTCAGAG 60.227 63.158 2.29 0.00 0.00 3.35
2645 4586 1.943116 CTAGTGCAGCGCCTCAGAGT 61.943 60.000 2.29 0.00 0.00 3.24
2646 4587 1.536073 TAGTGCAGCGCCTCAGAGTT 61.536 55.000 2.29 0.00 0.00 3.01
2647 4588 1.079819 GTGCAGCGCCTCAGAGTTA 60.080 57.895 2.29 0.00 0.00 2.24
2648 4589 1.080995 GTGCAGCGCCTCAGAGTTAG 61.081 60.000 2.29 0.00 0.00 2.34
2649 4590 1.520342 GCAGCGCCTCAGAGTTAGG 60.520 63.158 2.29 0.00 37.17 2.69
2654 4595 3.298958 CCTCAGAGTTAGGCGCCA 58.701 61.111 31.54 12.31 0.00 5.69
2655 4596 1.153549 CCTCAGAGTTAGGCGCCAC 60.154 63.158 31.54 19.69 0.00 5.01
2656 4597 1.517257 CTCAGAGTTAGGCGCCACG 60.517 63.158 31.54 6.58 0.00 4.94
2657 4598 2.509336 CAGAGTTAGGCGCCACGG 60.509 66.667 31.54 10.28 0.00 4.94
2658 4599 3.771160 AGAGTTAGGCGCCACGGG 61.771 66.667 31.54 0.00 0.00 5.28
2659 4600 4.078516 GAGTTAGGCGCCACGGGT 62.079 66.667 31.54 10.27 0.00 5.28
2660 4601 4.078516 AGTTAGGCGCCACGGGTC 62.079 66.667 31.54 12.28 0.00 4.46
2661 4602 4.382320 GTTAGGCGCCACGGGTCA 62.382 66.667 31.54 0.02 0.00 4.02
2662 4603 4.077184 TTAGGCGCCACGGGTCAG 62.077 66.667 31.54 0.00 0.00 3.51
2673 4614 2.746277 GGGTCAGCCGCGTGAAAT 60.746 61.111 4.92 0.00 34.97 2.17
2674 4615 1.448893 GGGTCAGCCGCGTGAAATA 60.449 57.895 4.92 0.00 34.97 1.40
2675 4616 1.429148 GGGTCAGCCGCGTGAAATAG 61.429 60.000 4.92 0.00 34.97 1.73
2676 4617 0.739813 GGTCAGCCGCGTGAAATAGT 60.740 55.000 4.92 0.00 0.00 2.12
2677 4618 1.076332 GTCAGCCGCGTGAAATAGTT 58.924 50.000 4.92 0.00 0.00 2.24
2678 4619 1.463444 GTCAGCCGCGTGAAATAGTTT 59.537 47.619 4.92 0.00 0.00 2.66
2679 4620 1.730064 TCAGCCGCGTGAAATAGTTTC 59.270 47.619 4.92 0.00 40.08 2.78
2680 4621 1.463056 CAGCCGCGTGAAATAGTTTCA 59.537 47.619 4.92 1.24 46.68 2.69
2690 4631 5.917541 TGAAATAGTTTCACGGACAGTTC 57.082 39.130 1.24 0.00 44.21 3.01
2691 4632 5.361427 TGAAATAGTTTCACGGACAGTTCA 58.639 37.500 1.24 0.00 44.21 3.18
2692 4633 5.995282 TGAAATAGTTTCACGGACAGTTCAT 59.005 36.000 1.24 0.00 44.21 2.57
2693 4634 6.485313 TGAAATAGTTTCACGGACAGTTCATT 59.515 34.615 1.24 0.00 44.21 2.57
2694 4635 6.481954 AATAGTTTCACGGACAGTTCATTC 57.518 37.500 0.00 0.00 0.00 2.67
2695 4636 4.073293 AGTTTCACGGACAGTTCATTCT 57.927 40.909 0.00 0.00 0.00 2.40
2696 4637 3.809832 AGTTTCACGGACAGTTCATTCTG 59.190 43.478 0.00 0.00 40.80 3.02
2698 4639 2.754472 TCACGGACAGTTCATTCTGTG 58.246 47.619 4.06 4.48 46.81 3.66
2700 4641 3.685139 ACGGACAGTTCATTCTGTGAT 57.315 42.857 4.06 0.00 46.81 3.06
2701 4642 4.008074 ACGGACAGTTCATTCTGTGATT 57.992 40.909 4.06 0.00 46.81 2.57
2702 4643 4.389374 ACGGACAGTTCATTCTGTGATTT 58.611 39.130 4.06 0.00 46.81 2.17
2703 4644 4.214119 ACGGACAGTTCATTCTGTGATTTG 59.786 41.667 4.06 0.00 46.81 2.32
2704 4645 4.452114 CGGACAGTTCATTCTGTGATTTGA 59.548 41.667 4.06 0.00 46.81 2.69
2705 4646 5.122869 CGGACAGTTCATTCTGTGATTTGAT 59.877 40.000 4.06 0.00 46.81 2.57
2706 4647 6.348786 CGGACAGTTCATTCTGTGATTTGATT 60.349 38.462 4.06 0.00 46.81 2.57
2707 4648 7.373493 GGACAGTTCATTCTGTGATTTGATTT 58.627 34.615 4.06 0.00 46.81 2.17
2708 4649 7.540055 GGACAGTTCATTCTGTGATTTGATTTC 59.460 37.037 4.06 0.00 46.81 2.17
2709 4650 7.080099 ACAGTTCATTCTGTGATTTGATTTCG 58.920 34.615 0.00 0.00 45.40 3.46
2710 4651 7.080099 CAGTTCATTCTGTGATTTGATTTCGT 58.920 34.615 0.00 0.00 36.54 3.85
2711 4652 7.592533 CAGTTCATTCTGTGATTTGATTTCGTT 59.407 33.333 0.00 0.00 36.54 3.85
2712 4653 8.137437 AGTTCATTCTGTGATTTGATTTCGTTT 58.863 29.630 0.00 0.00 36.54 3.60
2713 4654 9.393249 GTTCATTCTGTGATTTGATTTCGTTTA 57.607 29.630 0.00 0.00 36.54 2.01
2718 4659 8.786826 TCTGTGATTTGATTTCGTTTATAGGT 57.213 30.769 0.00 0.00 0.00 3.08
2719 4660 8.879759 TCTGTGATTTGATTTCGTTTATAGGTC 58.120 33.333 0.00 0.00 0.00 3.85
2720 4661 8.554835 TGTGATTTGATTTCGTTTATAGGTCA 57.445 30.769 0.00 0.00 0.00 4.02
2721 4662 9.004717 TGTGATTTGATTTCGTTTATAGGTCAA 57.995 29.630 0.00 0.00 0.00 3.18
2722 4663 9.834628 GTGATTTGATTTCGTTTATAGGTCAAA 57.165 29.630 0.00 0.00 38.14 2.69
2728 4669 9.834628 TGATTTCGTTTATAGGTCAAATTTGTC 57.165 29.630 17.47 12.07 0.00 3.18
2729 4670 9.834628 GATTTCGTTTATAGGTCAAATTTGTCA 57.165 29.630 17.47 0.00 0.00 3.58
2742 4683 4.335400 AATTTGTCAAATTTGCCGACCT 57.665 36.364 16.26 0.00 37.84 3.85
2743 4684 2.791383 TTGTCAAATTTGCCGACCTG 57.209 45.000 13.54 0.00 0.00 4.00
2744 4685 1.686355 TGTCAAATTTGCCGACCTGT 58.314 45.000 13.54 0.00 0.00 4.00
2745 4686 1.336440 TGTCAAATTTGCCGACCTGTG 59.664 47.619 13.54 0.00 0.00 3.66
2746 4687 0.958091 TCAAATTTGCCGACCTGTGG 59.042 50.000 13.54 0.00 0.00 4.17
2752 4693 2.279517 GCCGACCTGTGGCGATAG 60.280 66.667 0.00 0.00 43.70 2.08
2753 4694 2.417516 CCGACCTGTGGCGATAGG 59.582 66.667 10.03 10.03 40.01 2.57
2754 4695 2.417516 CGACCTGTGGCGATAGGG 59.582 66.667 15.77 0.21 38.42 3.53
2755 4696 2.822399 GACCTGTGGCGATAGGGG 59.178 66.667 15.77 0.00 38.42 4.79
2756 4697 3.462199 GACCTGTGGCGATAGGGGC 62.462 68.421 15.77 3.95 38.42 5.80
2757 4698 4.609018 CCTGTGGCGATAGGGGCG 62.609 72.222 3.40 0.00 34.76 6.13
2758 4699 4.609018 CTGTGGCGATAGGGGCGG 62.609 72.222 0.00 0.00 34.76 6.13
2765 4706 4.547367 GATAGGGGCGGCGTTGCT 62.547 66.667 9.37 0.00 34.52 3.91
2766 4707 4.109675 ATAGGGGCGGCGTTGCTT 62.110 61.111 9.37 0.00 34.52 3.91
2767 4708 4.770874 TAGGGGCGGCGTTGCTTC 62.771 66.667 9.37 0.00 34.52 3.86
2771 4712 3.849953 GGCGGCGTTGCTTCGTAG 61.850 66.667 9.37 0.00 34.52 3.51
2780 4721 2.709475 GCTTCGTAGCATTGGCCG 59.291 61.111 9.38 0.00 46.95 6.13
2781 4722 2.823829 GCTTCGTAGCATTGGCCGG 61.824 63.158 9.38 0.00 46.95 6.13
2782 4723 2.124901 TTCGTAGCATTGGCCGGG 60.125 61.111 2.18 0.00 42.56 5.73
2783 4724 2.869503 CTTCGTAGCATTGGCCGGGT 62.870 60.000 2.18 0.00 42.56 5.28
2784 4725 3.202001 CGTAGCATTGGCCGGGTG 61.202 66.667 2.18 0.00 42.56 4.61
2851 4792 2.782163 CTGCGAAGATGTTGCATTCTG 58.218 47.619 0.00 0.00 38.07 3.02
2858 4799 4.170292 AGATGTTGCATTCTGAACTTGC 57.830 40.909 8.64 8.64 36.91 4.01
2863 4804 0.179215 GCATTCTGAACTTGCCGACG 60.179 55.000 4.95 0.00 0.00 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 0.900182 TCCACTGACCACTGCTCGAT 60.900 55.000 0.00 0.00 0.00 3.59
52 53 0.900182 ATCCACTGACCACTGCTCGA 60.900 55.000 0.00 0.00 0.00 4.04
53 54 0.036952 AATCCACTGACCACTGCTCG 60.037 55.000 0.00 0.00 0.00 5.03
54 55 1.731720 GAATCCACTGACCACTGCTC 58.268 55.000 0.00 0.00 0.00 4.26
55 56 0.036952 CGAATCCACTGACCACTGCT 60.037 55.000 0.00 0.00 0.00 4.24
67 68 1.079197 ATGCACGCACTCGAATCCA 60.079 52.632 0.00 0.00 39.41 3.41
79 80 2.512286 AGGCGTCATCCATGCACG 60.512 61.111 0.00 6.99 39.02 5.34
87 88 1.890979 CATCCAGCCAGGCGTCATC 60.891 63.158 5.55 0.00 37.29 2.92
92 93 2.515523 CTTCCATCCAGCCAGGCG 60.516 66.667 5.55 0.53 37.29 5.52
96 97 2.679092 CCAGCTTCCATCCAGCCA 59.321 61.111 0.00 0.00 38.09 4.75
97 98 2.832201 GCCAGCTTCCATCCAGCC 60.832 66.667 0.00 0.00 38.09 4.85
98 99 2.119655 CAGCCAGCTTCCATCCAGC 61.120 63.158 0.00 0.00 37.56 4.85
99 100 1.453379 CCAGCCAGCTTCCATCCAG 60.453 63.158 0.00 0.00 0.00 3.86
100 101 2.679092 CCAGCCAGCTTCCATCCA 59.321 61.111 0.00 0.00 0.00 3.41
101 102 2.832201 GCCAGCCAGCTTCCATCC 60.832 66.667 0.00 0.00 0.00 3.51
102 103 2.044650 TGCCAGCCAGCTTCCATC 60.045 61.111 0.00 0.00 0.00 3.51
103 104 2.362120 GTGCCAGCCAGCTTCCAT 60.362 61.111 0.00 0.00 0.00 3.41
104 105 4.666253 GGTGCCAGCCAGCTTCCA 62.666 66.667 0.00 0.00 38.87 3.53
106 107 4.357279 AGGGTGCCAGCCAGCTTC 62.357 66.667 16.48 0.00 41.62 3.86
107 108 4.357279 GAGGGTGCCAGCCAGCTT 62.357 66.667 16.48 0.00 41.62 3.74
118 119 0.732571 ATTGTATTTGCGCGAGGGTG 59.267 50.000 12.10 0.00 0.00 4.61
120 121 2.559998 AAATTGTATTTGCGCGAGGG 57.440 45.000 12.10 0.00 0.00 4.30
122 123 7.436536 AATTCTAAAATTGTATTTGCGCGAG 57.563 32.000 12.10 0.00 33.78 5.03
123 124 8.897457 TTAATTCTAAAATTGTATTTGCGCGA 57.103 26.923 12.10 0.00 35.84 5.87
141 142 7.502561 CCTCCGTCCCAAAATAATCTTAATTCT 59.497 37.037 0.00 0.00 0.00 2.40
145 146 5.192121 TCCCTCCGTCCCAAAATAATCTTAA 59.808 40.000 0.00 0.00 0.00 1.85
148 149 3.120108 TCCCTCCGTCCCAAAATAATCT 58.880 45.455 0.00 0.00 0.00 2.40
149 150 3.118000 ACTCCCTCCGTCCCAAAATAATC 60.118 47.826 0.00 0.00 0.00 1.75
153 154 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
155 156 0.616679 CCTACTCCCTCCGTCCCAAA 60.617 60.000 0.00 0.00 0.00 3.28
156 157 1.001248 CCTACTCCCTCCGTCCCAA 59.999 63.158 0.00 0.00 0.00 4.12
158 159 2.838693 GCCTACTCCCTCCGTCCC 60.839 72.222 0.00 0.00 0.00 4.46
159 160 3.217743 CGCCTACTCCCTCCGTCC 61.218 72.222 0.00 0.00 0.00 4.79
160 161 2.050934 AACGCCTACTCCCTCCGTC 61.051 63.158 0.00 0.00 0.00 4.79
161 162 2.036890 AACGCCTACTCCCTCCGT 59.963 61.111 0.00 0.00 0.00 4.69
163 164 0.745468 CTACAACGCCTACTCCCTCC 59.255 60.000 0.00 0.00 0.00 4.30
166 167 1.143401 GGCTACAACGCCTACTCCC 59.857 63.158 0.00 0.00 46.63 4.30
167 168 4.829588 GGCTACAACGCCTACTCC 57.170 61.111 0.00 0.00 46.63 3.85
175 176 3.773630 CACCGTGCGGCTACAACG 61.774 66.667 10.87 2.27 39.32 4.10
194 195 2.611292 ACTATCACAGCGAGTACGTACC 59.389 50.000 21.80 12.32 41.98 3.34
220 221 1.202290 GGCCCGTGCATAAACTTGATG 60.202 52.381 0.00 0.00 40.13 3.07
247 620 0.385223 CAAAGCTCAACGCACAGCTC 60.385 55.000 3.30 0.00 45.58 4.09
249 622 2.012948 GCAAAGCTCAACGCACAGC 61.013 57.895 0.00 0.00 42.61 4.40
250 623 1.370900 GGCAAAGCTCAACGCACAG 60.371 57.895 0.00 0.00 42.61 3.66
255 628 4.012895 ACGCGGCAAAGCTCAACG 62.013 61.111 12.47 0.00 34.40 4.10
332 705 2.283966 AGGTCGGTGGAGGTGAGG 60.284 66.667 0.00 0.00 0.00 3.86
335 708 2.352032 GGAGAGGTCGGTGGAGGTG 61.352 68.421 0.00 0.00 0.00 4.00
350 723 1.550065 CGCGTTCTCACTACATGGAG 58.450 55.000 2.41 2.41 0.00 3.86
372 745 2.402830 GATGCATGTACGCACGCTCG 62.403 60.000 2.46 0.00 46.56 5.03
373 746 1.273887 GATGCATGTACGCACGCTC 59.726 57.895 2.46 0.00 46.56 5.03
374 747 2.173669 GGATGCATGTACGCACGCT 61.174 57.895 2.46 0.00 46.56 5.07
375 748 2.324477 GGATGCATGTACGCACGC 59.676 61.111 2.46 0.00 46.56 5.34
376 749 2.534019 GGGGATGCATGTACGCACG 61.534 63.158 2.46 0.00 46.56 5.34
377 750 1.451207 TGGGGATGCATGTACGCAC 60.451 57.895 2.46 0.00 46.56 5.34
383 756 2.045045 CGTGGTGGGGATGCATGT 60.045 61.111 2.46 0.00 0.00 3.21
456 830 1.372997 TCGAACTCGAGTGCCAAGC 60.373 57.895 20.85 3.98 44.22 4.01
470 844 6.211515 GTGGTACTCTCTTGTTTTACTCGAA 58.788 40.000 0.00 0.00 0.00 3.71
471 845 5.278660 GGTGGTACTCTCTTGTTTTACTCGA 60.279 44.000 0.00 0.00 0.00 4.04
472 846 4.922103 GGTGGTACTCTCTTGTTTTACTCG 59.078 45.833 0.00 0.00 0.00 4.18
473 847 5.695363 GTGGTGGTACTCTCTTGTTTTACTC 59.305 44.000 0.00 0.00 0.00 2.59
474 848 5.608449 GTGGTGGTACTCTCTTGTTTTACT 58.392 41.667 0.00 0.00 0.00 2.24
475 849 4.446719 CGTGGTGGTACTCTCTTGTTTTAC 59.553 45.833 0.00 0.00 0.00 2.01
510 887 2.997315 TGGACTGGAGGCGGTCAG 60.997 66.667 0.00 3.87 37.07 3.51
516 893 2.665603 GGAGTGTGGACTGGAGGC 59.334 66.667 0.00 0.00 30.16 4.70
517 894 1.127567 TTGGGAGTGTGGACTGGAGG 61.128 60.000 0.00 0.00 30.16 4.30
518 895 0.322975 CTTGGGAGTGTGGACTGGAG 59.677 60.000 0.00 0.00 30.16 3.86
534 912 0.174617 GAGAAGCGGAGGAGGACTTG 59.825 60.000 0.00 0.00 0.00 3.16
573 975 2.203139 CACTGCACCAACCGGTCA 60.203 61.111 8.04 0.00 44.71 4.02
632 1034 1.452108 CGCCAAGGAGGGAATGGAC 60.452 63.158 0.00 0.00 36.27 4.02
633 1035 1.615124 TCGCCAAGGAGGGAATGGA 60.615 57.895 0.00 0.00 36.27 3.41
634 1036 1.452108 GTCGCCAAGGAGGGAATGG 60.452 63.158 0.00 0.00 38.09 3.16
636 1038 2.680370 GGGTCGCCAAGGAGGGAAT 61.680 63.158 0.00 0.00 38.09 3.01
637 1039 3.327404 GGGTCGCCAAGGAGGGAA 61.327 66.667 0.00 0.00 38.09 3.97
908 1310 1.904287 TGAGGAAACAAATGGGGTCG 58.096 50.000 0.00 0.00 0.00 4.79
909 1311 4.681074 TTTTGAGGAAACAAATGGGGTC 57.319 40.909 0.00 0.00 39.09 4.46
936 1338 1.610363 GCAAATGGGGTCGCCATTTTT 60.610 47.619 33.23 19.16 42.83 1.94
937 1339 0.036483 GCAAATGGGGTCGCCATTTT 60.036 50.000 33.23 20.81 42.83 1.82
938 1340 0.904394 AGCAAATGGGGTCGCCATTT 60.904 50.000 31.22 31.22 45.21 2.32
939 1341 0.904394 AAGCAAATGGGGTCGCCATT 60.904 50.000 24.62 24.62 39.24 3.16
940 1342 1.305213 AAGCAAATGGGGTCGCCAT 60.305 52.632 15.49 15.49 0.00 4.40
945 1347 1.780503 ATAGCCAAGCAAATGGGGTC 58.219 50.000 5.50 0.00 41.01 4.46
960 1362 4.323562 CCAGCTGGTAGGGGTATAAATAGC 60.324 50.000 25.53 0.00 0.00 2.97
1002 1408 1.211703 TGAGGAAGGAGTTTGTGTGCA 59.788 47.619 0.00 0.00 0.00 4.57
1023 1431 3.948719 GACCCGGTGGCTTGGTGA 61.949 66.667 0.00 0.00 33.59 4.02
1026 1434 3.612247 CTCTGACCCGGTGGCTTGG 62.612 68.421 0.00 0.00 33.59 3.61
1027 1435 2.046892 CTCTGACCCGGTGGCTTG 60.047 66.667 0.00 0.00 33.59 4.01
1028 1436 2.203788 TCTCTGACCCGGTGGCTT 60.204 61.111 0.00 0.00 33.59 4.35
1308 1726 4.790140 CGATCGGCTTCTCATTTCTTTTTG 59.210 41.667 7.38 0.00 0.00 2.44
1309 1727 4.672801 GCGATCGGCTTCTCATTTCTTTTT 60.673 41.667 18.30 0.00 39.11 1.94
1310 1728 3.181506 GCGATCGGCTTCTCATTTCTTTT 60.182 43.478 18.30 0.00 39.11 2.27
1311 1729 2.352960 GCGATCGGCTTCTCATTTCTTT 59.647 45.455 18.30 0.00 39.11 2.52
1345 1763 1.608025 GGACACTCGGACAAGCAATGA 60.608 52.381 0.00 0.00 0.00 2.57
1346 1764 0.798776 GGACACTCGGACAAGCAATG 59.201 55.000 0.00 0.00 0.00 2.82
1368 1932 4.216257 GTGCAAGCATACCATATAGGGTTG 59.784 45.833 15.35 13.15 43.89 3.77
1371 1935 3.753272 GTGTGCAAGCATACCATATAGGG 59.247 47.826 10.37 0.82 43.89 3.53
1402 1967 2.669569 ACATGAACCAGCGCGCTT 60.670 55.556 34.58 18.96 0.00 4.68
1481 2372 0.042013 CGAGACAGCGATAGACGTCC 60.042 60.000 13.01 0.00 44.60 4.79
1610 2527 3.515901 AGATCAGGCGATAATACTTCCCC 59.484 47.826 0.00 0.00 29.66 4.81
1613 2530 6.031751 AGGAAGATCAGGCGATAATACTTC 57.968 41.667 0.00 0.00 32.13 3.01
1634 2551 9.378551 AGTACACACACATTACATATAACAAGG 57.621 33.333 0.00 0.00 0.00 3.61
1636 2553 8.661257 GCAGTACACACACATTACATATAACAA 58.339 33.333 0.00 0.00 0.00 2.83
1764 2982 1.002468 GATGTGCCATGGCGTCAATAC 60.002 52.381 30.87 21.94 45.51 1.89
1768 2986 2.039974 GTGATGTGCCATGGCGTCA 61.040 57.895 30.87 29.26 45.51 4.35
1793 3013 7.041303 CCTGTCGCAAGTAGACACTATAATCTA 60.041 40.741 0.00 0.00 42.91 1.98
1794 3014 6.238786 CCTGTCGCAAGTAGACACTATAATCT 60.239 42.308 0.00 0.00 42.91 2.40
1795 3015 5.915758 CCTGTCGCAAGTAGACACTATAATC 59.084 44.000 0.00 0.00 42.91 1.75
1796 3016 5.736492 GCCTGTCGCAAGTAGACACTATAAT 60.736 44.000 0.00 0.00 42.91 1.28
1884 3108 4.521256 CGAAATCTTTCTTAACAACCCCCA 59.479 41.667 1.56 0.00 35.07 4.96
1885 3109 4.082408 CCGAAATCTTTCTTAACAACCCCC 60.082 45.833 1.56 0.00 35.07 5.40
1886 3110 4.763279 TCCGAAATCTTTCTTAACAACCCC 59.237 41.667 1.56 0.00 35.07 4.95
1887 3111 5.472478 ACTCCGAAATCTTTCTTAACAACCC 59.528 40.000 1.56 0.00 35.07 4.11
1888 3112 6.017357 ACACTCCGAAATCTTTCTTAACAACC 60.017 38.462 1.56 0.00 35.07 3.77
1889 3113 6.956047 ACACTCCGAAATCTTTCTTAACAAC 58.044 36.000 1.56 0.00 35.07 3.32
1890 3114 8.665643 TTACACTCCGAAATCTTTCTTAACAA 57.334 30.769 1.56 0.00 35.07 2.83
1891 3115 8.665643 TTTACACTCCGAAATCTTTCTTAACA 57.334 30.769 1.56 0.00 35.07 2.41
1892 3116 9.378597 GTTTTACACTCCGAAATCTTTCTTAAC 57.621 33.333 1.56 0.00 35.07 2.01
1985 3230 3.196901 ACATGTGGACCGACAGCTAATTA 59.803 43.478 0.00 0.00 0.00 1.40
1994 3239 1.588674 TGAAACACATGTGGACCGAC 58.411 50.000 28.64 13.88 34.19 4.79
2101 3348 8.528044 AGTTTGGGTTACTCACTTCATAAAAA 57.472 30.769 0.00 0.00 0.00 1.94
2105 3411 7.549147 AGTAGTTTGGGTTACTCACTTCATA 57.451 36.000 0.00 0.00 0.00 2.15
2112 3418 6.555711 AGGTACTAGTAGTTTGGGTTACTCA 58.444 40.000 8.40 0.00 36.02 3.41
2183 4108 1.002430 GAGCACACAGGTGATTCCAGA 59.998 52.381 6.40 0.00 45.14 3.86
2267 4192 2.092538 CAGATGCATTCTCCCTGGTTCT 60.093 50.000 0.00 0.00 29.93 3.01
2298 4228 1.963515 AGCATCCACAAAAAGTCCCAC 59.036 47.619 0.00 0.00 0.00 4.61
2300 4230 1.337167 GCAGCATCCACAAAAAGTCCC 60.337 52.381 0.00 0.00 0.00 4.46
2348 4289 6.431198 TTTCGTCTATAGGTCAAATTTGCC 57.569 37.500 13.54 16.46 0.00 4.52
2349 4290 7.693952 TGATTTCGTCTATAGGTCAAATTTGC 58.306 34.615 13.54 8.47 0.00 3.68
2353 4294 9.613428 TGATTTGATTTCGTCTATAGGTCAAAT 57.387 29.630 17.06 17.06 43.48 2.32
2354 4295 8.879759 GTGATTTGATTTCGTCTATAGGTCAAA 58.120 33.333 0.00 7.93 38.14 2.69
2355 4296 8.038351 TGTGATTTGATTTCGTCTATAGGTCAA 58.962 33.333 0.00 0.00 0.00 3.18
2356 4297 7.552459 TGTGATTTGATTTCGTCTATAGGTCA 58.448 34.615 0.00 0.00 0.00 4.02
2357 4298 7.921214 TCTGTGATTTGATTTCGTCTATAGGTC 59.079 37.037 0.00 0.00 0.00 3.85
2358 4299 7.782049 TCTGTGATTTGATTTCGTCTATAGGT 58.218 34.615 0.00 0.00 0.00 3.08
2359 4300 8.648557 TTCTGTGATTTGATTTCGTCTATAGG 57.351 34.615 0.00 0.00 0.00 2.57
2361 4302 9.816354 TCATTCTGTGATTTGATTTCGTCTATA 57.184 29.630 0.00 0.00 0.00 1.31
2362 4303 8.722480 TCATTCTGTGATTTGATTTCGTCTAT 57.278 30.769 0.00 0.00 0.00 1.98
2363 4304 8.443160 GTTCATTCTGTGATTTGATTTCGTCTA 58.557 33.333 0.00 0.00 36.54 2.59
2364 4305 7.173907 AGTTCATTCTGTGATTTGATTTCGTCT 59.826 33.333 0.00 0.00 36.54 4.18
2365 4306 7.301054 AGTTCATTCTGTGATTTGATTTCGTC 58.699 34.615 0.00 0.00 36.54 4.20
2366 4307 7.206981 AGTTCATTCTGTGATTTGATTTCGT 57.793 32.000 0.00 0.00 36.54 3.85
2367 4308 9.430838 GATAGTTCATTCTGTGATTTGATTTCG 57.569 33.333 0.00 0.00 36.54 3.46
2368 4309 9.727627 GGATAGTTCATTCTGTGATTTGATTTC 57.272 33.333 0.00 0.00 36.54 2.17
2369 4310 9.246670 TGGATAGTTCATTCTGTGATTTGATTT 57.753 29.630 0.00 0.00 36.54 2.17
2370 4311 8.812513 TGGATAGTTCATTCTGTGATTTGATT 57.187 30.769 0.00 0.00 36.54 2.57
2371 4312 8.847196 CATGGATAGTTCATTCTGTGATTTGAT 58.153 33.333 0.00 0.00 36.54 2.57
2372 4313 8.048514 TCATGGATAGTTCATTCTGTGATTTGA 58.951 33.333 0.00 0.00 36.54 2.69
2373 4314 8.217131 TCATGGATAGTTCATTCTGTGATTTG 57.783 34.615 0.00 0.00 36.54 2.32
2374 4315 8.812513 TTCATGGATAGTTCATTCTGTGATTT 57.187 30.769 0.00 0.00 36.54 2.17
2375 4316 8.680903 GTTTCATGGATAGTTCATTCTGTGATT 58.319 33.333 0.00 0.00 36.54 2.57
2376 4317 8.051535 AGTTTCATGGATAGTTCATTCTGTGAT 58.948 33.333 0.00 0.00 36.54 3.06
2377 4318 7.397221 AGTTTCATGGATAGTTCATTCTGTGA 58.603 34.615 0.00 0.00 34.25 3.58
2378 4319 7.621428 AGTTTCATGGATAGTTCATTCTGTG 57.379 36.000 0.00 0.00 0.00 3.66
2379 4320 9.911788 AATAGTTTCATGGATAGTTCATTCTGT 57.088 29.630 0.00 0.00 0.00 3.41
2396 4337 2.811431 CCAGCCGTGTGAAATAGTTTCA 59.189 45.455 1.24 1.24 46.68 2.69
2397 4338 2.414161 GCCAGCCGTGTGAAATAGTTTC 60.414 50.000 0.00 0.00 40.08 2.78
2398 4339 1.539827 GCCAGCCGTGTGAAATAGTTT 59.460 47.619 0.00 0.00 0.00 2.66
2399 4340 1.165270 GCCAGCCGTGTGAAATAGTT 58.835 50.000 0.00 0.00 0.00 2.24
2400 4341 0.676782 GGCCAGCCGTGTGAAATAGT 60.677 55.000 0.00 0.00 0.00 2.12
2401 4342 0.392998 AGGCCAGCCGTGTGAAATAG 60.393 55.000 5.01 0.00 41.95 1.73
2402 4343 0.037590 AAGGCCAGCCGTGTGAAATA 59.962 50.000 5.01 0.00 41.95 1.40
2403 4344 0.827507 AAAGGCCAGCCGTGTGAAAT 60.828 50.000 5.01 0.00 41.95 2.17
2404 4345 1.040339 AAAAGGCCAGCCGTGTGAAA 61.040 50.000 5.01 0.00 41.95 2.69
2405 4346 1.040339 AAAAAGGCCAGCCGTGTGAA 61.040 50.000 5.01 0.00 41.95 3.18
2406 4347 1.454847 AAAAAGGCCAGCCGTGTGA 60.455 52.632 5.01 0.00 41.95 3.58
2407 4348 1.300080 CAAAAAGGCCAGCCGTGTG 60.300 57.895 5.01 0.00 41.95 3.82
2408 4349 1.756561 ACAAAAAGGCCAGCCGTGT 60.757 52.632 5.01 3.97 41.95 4.49
2409 4350 1.300080 CACAAAAAGGCCAGCCGTG 60.300 57.895 5.01 1.25 41.95 4.94
2410 4351 1.756561 ACACAAAAAGGCCAGCCGT 60.757 52.632 5.01 0.00 41.95 5.68
2411 4352 1.300080 CACACAAAAAGGCCAGCCG 60.300 57.895 5.01 0.00 41.95 5.52
2412 4353 0.249447 GTCACACAAAAAGGCCAGCC 60.249 55.000 5.01 0.00 0.00 4.85
2413 4354 0.594796 CGTCACACAAAAAGGCCAGC 60.595 55.000 5.01 0.00 0.00 4.85
2414 4355 0.594796 GCGTCACACAAAAAGGCCAG 60.595 55.000 5.01 0.00 0.00 4.85
2415 4356 1.435515 GCGTCACACAAAAAGGCCA 59.564 52.632 5.01 0.00 0.00 5.36
2416 4357 1.299850 GGCGTCACACAAAAAGGCC 60.300 57.895 0.00 0.00 36.86 5.19
2417 4358 1.299850 GGGCGTCACACAAAAAGGC 60.300 57.895 0.00 0.00 0.00 4.35
2418 4359 1.008995 CGGGCGTCACACAAAAAGG 60.009 57.895 0.00 0.00 0.00 3.11
2419 4360 0.316689 GTCGGGCGTCACACAAAAAG 60.317 55.000 0.00 0.00 0.00 2.27
2420 4361 1.025113 TGTCGGGCGTCACACAAAAA 61.025 50.000 0.00 0.00 0.00 1.94
2421 4362 1.449778 TGTCGGGCGTCACACAAAA 60.450 52.632 0.00 0.00 0.00 2.44
2422 4363 2.174969 GTGTCGGGCGTCACACAAA 61.175 57.895 5.81 0.00 42.20 2.83
2423 4364 2.586635 GTGTCGGGCGTCACACAA 60.587 61.111 5.81 0.00 42.20 3.33
2424 4365 4.934942 CGTGTCGGGCGTCACACA 62.935 66.667 10.72 0.00 42.67 3.72
2425 4366 4.634133 TCGTGTCGGGCGTCACAC 62.634 66.667 0.75 0.75 39.70 3.82
2426 4367 3.834447 CTTCGTGTCGGGCGTCACA 62.834 63.158 0.00 0.00 34.69 3.58
2427 4368 3.103911 CTTCGTGTCGGGCGTCAC 61.104 66.667 0.00 0.00 0.00 3.67
2428 4369 4.351938 CCTTCGTGTCGGGCGTCA 62.352 66.667 0.00 0.00 0.00 4.35
2436 4377 2.758770 TAGTGTGGCGCCTTCGTGTC 62.759 60.000 29.70 10.72 38.14 3.67
2437 4378 2.863346 TAGTGTGGCGCCTTCGTGT 61.863 57.895 29.70 9.85 38.14 4.49
2438 4379 2.048597 TAGTGTGGCGCCTTCGTG 60.049 61.111 29.70 0.00 38.14 4.35
2439 4380 2.048503 GTAGTGTGGCGCCTTCGT 60.049 61.111 29.70 12.53 38.14 3.85
2440 4381 2.048597 TGTAGTGTGGCGCCTTCG 60.049 61.111 29.70 0.00 39.07 3.79
2441 4382 0.245539 TAGTGTAGTGTGGCGCCTTC 59.754 55.000 29.70 20.58 0.00 3.46
2442 4383 0.902531 ATAGTGTAGTGTGGCGCCTT 59.097 50.000 29.70 13.03 0.00 4.35
2443 4384 0.175760 CATAGTGTAGTGTGGCGCCT 59.824 55.000 29.70 9.99 0.00 5.52
2444 4385 1.429148 GCATAGTGTAGTGTGGCGCC 61.429 60.000 22.73 22.73 0.00 6.53
2445 4386 0.739462 TGCATAGTGTAGTGTGGCGC 60.739 55.000 0.00 0.00 0.00 6.53
2446 4387 1.393539 GTTGCATAGTGTAGTGTGGCG 59.606 52.381 0.00 0.00 0.00 5.69
2447 4388 1.393539 CGTTGCATAGTGTAGTGTGGC 59.606 52.381 0.00 0.00 0.00 5.01
2448 4389 1.393539 GCGTTGCATAGTGTAGTGTGG 59.606 52.381 0.00 0.00 0.00 4.17
2449 4390 1.393539 GGCGTTGCATAGTGTAGTGTG 59.606 52.381 0.00 0.00 0.00 3.82
2450 4391 1.275291 AGGCGTTGCATAGTGTAGTGT 59.725 47.619 0.00 0.00 0.00 3.55
2451 4392 1.927174 GAGGCGTTGCATAGTGTAGTG 59.073 52.381 0.00 0.00 0.00 2.74
2452 4393 1.548719 TGAGGCGTTGCATAGTGTAGT 59.451 47.619 0.00 0.00 0.00 2.73
2453 4394 1.927174 GTGAGGCGTTGCATAGTGTAG 59.073 52.381 0.00 0.00 0.00 2.74
2454 4395 1.273886 TGTGAGGCGTTGCATAGTGTA 59.726 47.619 0.00 0.00 0.00 2.90
2455 4396 0.034756 TGTGAGGCGTTGCATAGTGT 59.965 50.000 0.00 0.00 0.00 3.55
2456 4397 0.723414 CTGTGAGGCGTTGCATAGTG 59.277 55.000 0.00 0.00 0.00 2.74
2457 4398 0.608130 TCTGTGAGGCGTTGCATAGT 59.392 50.000 0.00 0.00 0.00 2.12
2458 4399 1.945387 ATCTGTGAGGCGTTGCATAG 58.055 50.000 0.00 0.00 0.00 2.23
2459 4400 2.224042 CCTATCTGTGAGGCGTTGCATA 60.224 50.000 0.00 0.00 0.00 3.14
2460 4401 1.473965 CCTATCTGTGAGGCGTTGCAT 60.474 52.381 0.00 0.00 0.00 3.96
2461 4402 0.108186 CCTATCTGTGAGGCGTTGCA 60.108 55.000 0.00 0.00 0.00 4.08
2462 4403 2.682893 CCTATCTGTGAGGCGTTGC 58.317 57.895 0.00 0.00 0.00 4.17
2468 4409 1.032794 TGTAGCGCCTATCTGTGAGG 58.967 55.000 2.29 0.00 37.12 3.86
2469 4410 1.598183 CGTGTAGCGCCTATCTGTGAG 60.598 57.143 2.29 0.00 0.00 3.51
2470 4411 0.380733 CGTGTAGCGCCTATCTGTGA 59.619 55.000 2.29 0.00 0.00 3.58
2471 4412 0.595053 CCGTGTAGCGCCTATCTGTG 60.595 60.000 2.29 0.00 39.71 3.66
2472 4413 1.734137 CCGTGTAGCGCCTATCTGT 59.266 57.895 2.29 0.00 39.71 3.41
2473 4414 1.661821 GCCGTGTAGCGCCTATCTG 60.662 63.158 2.29 0.00 39.71 2.90
2474 4415 2.728817 GCCGTGTAGCGCCTATCT 59.271 61.111 2.29 0.00 39.71 1.98
2475 4416 2.355956 GGCCGTGTAGCGCCTATC 60.356 66.667 2.29 0.00 39.71 2.08
2476 4417 3.151710 TGGCCGTGTAGCGCCTAT 61.152 61.111 2.29 0.00 39.71 2.57
2477 4418 3.833645 CTGGCCGTGTAGCGCCTA 61.834 66.667 2.29 0.00 39.71 3.93
2495 4436 3.179265 GATCACACGGGTGCGACG 61.179 66.667 14.50 0.00 44.87 5.12
2496 4437 2.048597 TGATCACACGGGTGCGAC 60.049 61.111 14.50 7.33 44.87 5.19
2497 4438 1.811645 TTCTGATCACACGGGTGCGA 61.812 55.000 14.50 3.83 44.87 5.10
2498 4439 0.948623 TTTCTGATCACACGGGTGCG 60.949 55.000 14.50 1.20 44.87 5.34
2499 4440 1.234821 TTTTCTGATCACACGGGTGC 58.765 50.000 14.50 0.00 44.87 5.01
2500 4441 4.695455 AGTAATTTTCTGATCACACGGGTG 59.305 41.667 12.84 12.84 46.66 4.61
2501 4442 4.906618 AGTAATTTTCTGATCACACGGGT 58.093 39.130 0.00 0.00 0.00 5.28
2502 4443 6.594159 ACTTAGTAATTTTCTGATCACACGGG 59.406 38.462 0.00 0.00 0.00 5.28
2503 4444 7.330946 TGACTTAGTAATTTTCTGATCACACGG 59.669 37.037 0.00 0.00 0.00 4.94
2504 4445 8.239681 TGACTTAGTAATTTTCTGATCACACG 57.760 34.615 0.00 0.00 0.00 4.49
2505 4446 9.209175 ACTGACTTAGTAATTTTCTGATCACAC 57.791 33.333 0.00 0.00 38.04 3.82
2506 4447 9.208022 CACTGACTTAGTAATTTTCTGATCACA 57.792 33.333 0.00 0.00 37.60 3.58
2507 4448 9.209175 ACACTGACTTAGTAATTTTCTGATCAC 57.791 33.333 0.00 0.00 37.60 3.06
2508 4449 9.208022 CACACTGACTTAGTAATTTTCTGATCA 57.792 33.333 0.00 0.00 37.60 2.92
2509 4450 8.171840 GCACACTGACTTAGTAATTTTCTGATC 58.828 37.037 0.00 0.00 37.60 2.92
2510 4451 7.661437 TGCACACTGACTTAGTAATTTTCTGAT 59.339 33.333 0.00 0.00 37.60 2.90
2511 4452 6.989759 TGCACACTGACTTAGTAATTTTCTGA 59.010 34.615 0.00 0.00 37.60 3.27
2512 4453 7.189693 TGCACACTGACTTAGTAATTTTCTG 57.810 36.000 0.00 0.00 37.60 3.02
2513 4454 6.073003 GCTGCACACTGACTTAGTAATTTTCT 60.073 38.462 0.00 0.00 37.60 2.52
2514 4455 6.080406 GCTGCACACTGACTTAGTAATTTTC 58.920 40.000 0.00 0.00 37.60 2.29
2515 4456 5.334105 CGCTGCACACTGACTTAGTAATTTT 60.334 40.000 0.00 0.00 37.60 1.82
2516 4457 4.152402 CGCTGCACACTGACTTAGTAATTT 59.848 41.667 0.00 0.00 37.60 1.82
2517 4458 3.679980 CGCTGCACACTGACTTAGTAATT 59.320 43.478 0.00 0.00 37.60 1.40
2518 4459 3.254060 CGCTGCACACTGACTTAGTAAT 58.746 45.455 0.00 0.00 37.60 1.89
2519 4460 2.672714 CGCTGCACACTGACTTAGTAA 58.327 47.619 0.00 0.00 37.60 2.24
2520 4461 1.668919 GCGCTGCACACTGACTTAGTA 60.669 52.381 0.00 0.00 37.60 1.82
2521 4462 0.946221 GCGCTGCACACTGACTTAGT 60.946 55.000 0.00 0.00 41.36 2.24
2522 4463 1.630244 GGCGCTGCACACTGACTTAG 61.630 60.000 7.64 0.00 0.00 2.18
2523 4464 1.667830 GGCGCTGCACACTGACTTA 60.668 57.895 7.64 0.00 0.00 2.24
2524 4465 2.974698 GGCGCTGCACACTGACTT 60.975 61.111 7.64 0.00 0.00 3.01
2525 4466 3.933722 AGGCGCTGCACACTGACT 61.934 61.111 7.64 0.00 0.00 3.41
2526 4467 3.720193 CAGGCGCTGCACACTGAC 61.720 66.667 7.64 0.00 32.86 3.51
2527 4468 3.871248 CTCAGGCGCTGCACACTGA 62.871 63.158 7.64 9.54 37.61 3.41
2528 4469 3.420606 CTCAGGCGCTGCACACTG 61.421 66.667 7.64 4.89 0.00 3.66
2529 4470 3.586461 CTCTCAGGCGCTGCACACT 62.586 63.158 7.64 0.00 0.00 3.55
2530 4471 3.117171 CTCTCAGGCGCTGCACAC 61.117 66.667 7.64 0.00 0.00 3.82
2532 4473 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
2533 4474 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
2534 4475 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
2535 4476 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
2547 4488 4.165507 ACTGTATAGTGTGGCGCCTAGC 62.166 54.545 29.70 17.93 39.66 3.42
2548 4489 1.681793 ACTGTATAGTGTGGCGCCTAG 59.318 52.381 29.70 13.13 35.34 3.02
2549 4490 1.771565 ACTGTATAGTGTGGCGCCTA 58.228 50.000 29.70 14.39 35.34 3.93
2550 4491 2.591915 ACTGTATAGTGTGGCGCCT 58.408 52.632 29.70 9.99 35.34 5.52
2559 4500 4.205587 AGTTAGGCGCTACACTGTATAGT 58.794 43.478 7.64 0.00 37.75 2.12
2560 4501 4.320348 GGAGTTAGGCGCTACACTGTATAG 60.320 50.000 7.64 0.00 0.00 1.31
2561 4502 3.567164 GGAGTTAGGCGCTACACTGTATA 59.433 47.826 7.64 0.00 0.00 1.47
2562 4503 2.361438 GGAGTTAGGCGCTACACTGTAT 59.639 50.000 7.64 0.00 0.00 2.29
2563 4504 1.747355 GGAGTTAGGCGCTACACTGTA 59.253 52.381 7.64 0.00 0.00 2.74
2564 4505 0.531200 GGAGTTAGGCGCTACACTGT 59.469 55.000 7.64 0.00 0.00 3.55
2565 4506 0.818296 AGGAGTTAGGCGCTACACTG 59.182 55.000 7.64 0.00 0.00 3.66
2566 4507 2.299521 CTAGGAGTTAGGCGCTACACT 58.700 52.381 7.64 6.48 0.00 3.55
2567 4508 1.337387 CCTAGGAGTTAGGCGCTACAC 59.663 57.143 7.64 0.76 42.50 2.90
2568 4509 1.688772 CCTAGGAGTTAGGCGCTACA 58.311 55.000 7.64 0.00 42.50 2.74
2576 4517 1.204941 AGTGCAACGCCTAGGAGTTAG 59.795 52.381 27.73 21.70 45.86 2.34
2577 4518 1.263356 AGTGCAACGCCTAGGAGTTA 58.737 50.000 27.73 13.06 45.86 2.24
2578 4519 1.204941 CTAGTGCAACGCCTAGGAGTT 59.795 52.381 23.63 23.63 45.86 3.01
2579 4520 0.818296 CTAGTGCAACGCCTAGGAGT 59.182 55.000 14.75 13.84 45.86 3.85
2580 4521 0.818296 ACTAGTGCAACGCCTAGGAG 59.182 55.000 14.75 12.99 45.86 3.69
2581 4522 0.530744 CACTAGTGCAACGCCTAGGA 59.469 55.000 14.75 0.00 45.86 2.94
2582 4523 3.050703 CACTAGTGCAACGCCTAGG 57.949 57.895 10.54 3.67 45.86 3.02
2593 4534 1.880340 GCTAGGCGCTGCACTAGTG 60.880 63.158 18.93 18.93 39.07 2.74
2594 4535 2.496817 GCTAGGCGCTGCACTAGT 59.503 61.111 21.78 0.00 39.07 2.57
2606 4547 2.187946 CAACGCCTGGGAGCTAGG 59.812 66.667 0.00 0.00 38.39 3.02
2607 4548 2.512515 GCAACGCCTGGGAGCTAG 60.513 66.667 0.00 0.00 0.00 3.42
2608 4549 3.318384 TGCAACGCCTGGGAGCTA 61.318 61.111 0.00 0.00 0.00 3.32
2610 4551 3.605749 TAGTGCAACGCCTGGGAGC 62.606 63.158 0.00 0.00 45.86 4.70
2611 4552 1.448540 CTAGTGCAACGCCTGGGAG 60.449 63.158 0.00 0.00 45.86 4.30
2612 4553 2.214216 ACTAGTGCAACGCCTGGGA 61.214 57.895 0.00 0.00 45.86 4.37
2613 4554 2.034879 CACTAGTGCAACGCCTGGG 61.035 63.158 10.54 0.00 45.86 4.45
2614 4555 3.566261 CACTAGTGCAACGCCTGG 58.434 61.111 10.54 0.00 45.86 4.45
2624 4565 1.808799 CTGAGGCGCTGCACTAGTG 60.809 63.158 18.93 18.93 39.95 2.74
2625 4566 1.943116 CTCTGAGGCGCTGCACTAGT 61.943 60.000 7.64 0.00 0.00 2.57
2626 4567 1.226916 CTCTGAGGCGCTGCACTAG 60.227 63.158 7.64 0.70 0.00 2.57
2627 4568 1.536073 AACTCTGAGGCGCTGCACTA 61.536 55.000 7.64 0.00 0.00 2.74
2628 4569 1.536073 TAACTCTGAGGCGCTGCACT 61.536 55.000 7.64 0.00 0.00 4.40
2629 4570 1.079819 TAACTCTGAGGCGCTGCAC 60.080 57.895 7.64 0.00 0.00 4.57
2630 4571 1.216444 CTAACTCTGAGGCGCTGCA 59.784 57.895 7.64 4.82 0.00 4.41
2631 4572 1.520342 CCTAACTCTGAGGCGCTGC 60.520 63.158 7.64 0.00 0.00 5.25
2632 4573 4.823276 CCTAACTCTGAGGCGCTG 57.177 61.111 7.64 0.00 0.00 5.18
2637 4578 1.153549 GTGGCGCCTAACTCTGAGG 60.154 63.158 29.70 0.00 37.12 3.86
2638 4579 1.517257 CGTGGCGCCTAACTCTGAG 60.517 63.158 29.70 2.45 0.00 3.35
2639 4580 2.571757 CGTGGCGCCTAACTCTGA 59.428 61.111 29.70 0.07 0.00 3.27
2640 4581 2.509336 CCGTGGCGCCTAACTCTG 60.509 66.667 29.70 8.92 0.00 3.35
2641 4582 3.771160 CCCGTGGCGCCTAACTCT 61.771 66.667 29.70 0.00 0.00 3.24
2642 4583 4.078516 ACCCGTGGCGCCTAACTC 62.079 66.667 29.70 11.56 0.00 3.01
2643 4584 4.078516 GACCCGTGGCGCCTAACT 62.079 66.667 29.70 5.90 0.00 2.24
2644 4585 4.382320 TGACCCGTGGCGCCTAAC 62.382 66.667 29.70 17.80 0.00 2.34
2645 4586 4.077184 CTGACCCGTGGCGCCTAA 62.077 66.667 29.70 4.80 0.00 2.69
2656 4597 1.429148 CTATTTCACGCGGCTGACCC 61.429 60.000 12.47 0.00 0.00 4.46
2657 4598 0.739813 ACTATTTCACGCGGCTGACC 60.740 55.000 12.47 0.00 0.00 4.02
2658 4599 1.076332 AACTATTTCACGCGGCTGAC 58.924 50.000 12.47 0.00 0.00 3.51
2659 4600 1.730064 GAAACTATTTCACGCGGCTGA 59.270 47.619 12.47 2.44 39.45 4.26
2660 4601 1.463056 TGAAACTATTTCACGCGGCTG 59.537 47.619 12.47 0.00 44.21 4.85
2661 4602 1.803334 TGAAACTATTTCACGCGGCT 58.197 45.000 12.47 0.00 44.21 5.52
2668 4609 5.361427 TGAACTGTCCGTGAAACTATTTCA 58.639 37.500 0.00 0.00 46.68 2.69
2669 4610 5.917541 TGAACTGTCCGTGAAACTATTTC 57.082 39.130 0.00 0.00 40.08 2.17
2670 4611 6.710744 AGAATGAACTGTCCGTGAAACTATTT 59.289 34.615 0.00 0.00 31.75 1.40
2671 4612 6.147821 CAGAATGAACTGTCCGTGAAACTATT 59.852 38.462 0.00 0.00 39.69 1.73
2672 4613 5.639506 CAGAATGAACTGTCCGTGAAACTAT 59.360 40.000 0.00 0.00 39.69 2.12
2673 4614 4.988540 CAGAATGAACTGTCCGTGAAACTA 59.011 41.667 0.00 0.00 39.69 2.24
2674 4615 3.809832 CAGAATGAACTGTCCGTGAAACT 59.190 43.478 0.00 0.00 39.69 2.66
2675 4616 3.560068 ACAGAATGAACTGTCCGTGAAAC 59.440 43.478 0.00 0.00 46.36 2.78
2676 4617 3.804036 ACAGAATGAACTGTCCGTGAAA 58.196 40.909 0.00 0.00 46.36 2.69
2677 4618 3.469008 ACAGAATGAACTGTCCGTGAA 57.531 42.857 0.00 0.00 46.36 3.18
2685 4626 7.080099 ACGAAATCAAATCACAGAATGAACTG 58.920 34.615 0.00 0.00 41.93 3.16
2686 4627 7.206981 ACGAAATCAAATCACAGAATGAACT 57.793 32.000 0.00 0.00 41.93 3.01
2687 4628 7.858052 AACGAAATCAAATCACAGAATGAAC 57.142 32.000 0.00 0.00 41.93 3.18
2692 4633 9.226606 ACCTATAAACGAAATCAAATCACAGAA 57.773 29.630 0.00 0.00 0.00 3.02
2693 4634 8.786826 ACCTATAAACGAAATCAAATCACAGA 57.213 30.769 0.00 0.00 0.00 3.41
2694 4635 8.664798 TGACCTATAAACGAAATCAAATCACAG 58.335 33.333 0.00 0.00 0.00 3.66
2695 4636 8.554835 TGACCTATAAACGAAATCAAATCACA 57.445 30.769 0.00 0.00 0.00 3.58
2696 4637 9.834628 TTTGACCTATAAACGAAATCAAATCAC 57.165 29.630 0.00 0.00 31.51 3.06
2702 4643 9.834628 GACAAATTTGACCTATAAACGAAATCA 57.165 29.630 24.64 0.00 0.00 2.57
2703 4644 9.834628 TGACAAATTTGACCTATAAACGAAATC 57.165 29.630 24.64 6.30 0.00 2.17
2721 4662 4.057432 CAGGTCGGCAAATTTGACAAATT 58.943 39.130 23.49 18.41 42.62 1.82
2722 4663 3.069443 ACAGGTCGGCAAATTTGACAAAT 59.931 39.130 23.49 7.62 35.35 2.32
2723 4664 2.428890 ACAGGTCGGCAAATTTGACAAA 59.571 40.909 23.49 8.36 35.35 2.83
2724 4665 2.028130 ACAGGTCGGCAAATTTGACAA 58.972 42.857 23.49 1.91 35.35 3.18
2725 4666 1.336440 CACAGGTCGGCAAATTTGACA 59.664 47.619 23.49 8.31 35.35 3.58
2726 4667 1.335872 CCACAGGTCGGCAAATTTGAC 60.336 52.381 22.31 18.50 0.00 3.18
2727 4668 0.958091 CCACAGGTCGGCAAATTTGA 59.042 50.000 22.31 0.00 0.00 2.69
2728 4669 3.495124 CCACAGGTCGGCAAATTTG 57.505 52.632 14.03 14.03 0.00 2.32
2735 4676 2.279517 CTATCGCCACAGGTCGGC 60.280 66.667 0.00 0.00 46.62 5.54
2736 4677 2.417516 CCTATCGCCACAGGTCGG 59.582 66.667 0.00 0.00 0.00 4.79
2737 4678 2.417516 CCCTATCGCCACAGGTCG 59.582 66.667 0.00 0.00 0.00 4.79
2738 4679 2.822399 CCCCTATCGCCACAGGTC 59.178 66.667 0.00 0.00 0.00 3.85
2739 4680 3.480133 GCCCCTATCGCCACAGGT 61.480 66.667 0.00 0.00 0.00 4.00
2740 4681 4.609018 CGCCCCTATCGCCACAGG 62.609 72.222 0.00 0.00 0.00 4.00
2741 4682 4.609018 CCGCCCCTATCGCCACAG 62.609 72.222 0.00 0.00 0.00 3.66
2748 4689 4.547367 AGCAACGCCGCCCCTATC 62.547 66.667 0.00 0.00 0.00 2.08
2749 4690 4.109675 AAGCAACGCCGCCCCTAT 62.110 61.111 0.00 0.00 0.00 2.57
2750 4691 4.770874 GAAGCAACGCCGCCCCTA 62.771 66.667 0.00 0.00 0.00 3.53
2754 4695 3.849953 CTACGAAGCAACGCCGCC 61.850 66.667 0.00 0.00 36.70 6.13
2764 4705 2.180204 CCCGGCCAATGCTACGAAG 61.180 63.158 2.24 0.00 37.74 3.79
2765 4706 2.124901 CCCGGCCAATGCTACGAA 60.125 61.111 2.24 0.00 37.74 3.85
2766 4707 3.395702 ACCCGGCCAATGCTACGA 61.396 61.111 2.24 0.00 37.74 3.43
2767 4708 3.202001 CACCCGGCCAATGCTACG 61.202 66.667 2.24 0.00 37.74 3.51
2768 4709 2.260088 TACCACCCGGCCAATGCTAC 62.260 60.000 2.24 0.00 37.74 3.58
2769 4710 1.349542 ATACCACCCGGCCAATGCTA 61.350 55.000 2.24 0.00 37.74 3.49
2770 4711 2.689691 ATACCACCCGGCCAATGCT 61.690 57.895 2.24 0.00 37.74 3.79
2771 4712 2.123897 ATACCACCCGGCCAATGC 60.124 61.111 2.24 0.00 34.57 3.56
2772 4713 1.827789 CCATACCACCCGGCCAATG 60.828 63.158 2.24 0.00 34.57 2.82
2773 4714 2.600731 CCATACCACCCGGCCAAT 59.399 61.111 2.24 0.00 34.57 3.16
2774 4715 3.733972 CCCATACCACCCGGCCAA 61.734 66.667 2.24 0.00 34.57 4.52
2777 4718 3.655350 AAAGCCCATACCACCCGGC 62.655 63.158 0.00 0.00 41.96 6.13
2778 4719 1.752694 CAAAGCCCATACCACCCGG 60.753 63.158 0.00 0.00 38.77 5.73
2779 4720 1.752694 CCAAAGCCCATACCACCCG 60.753 63.158 0.00 0.00 0.00 5.28
2780 4721 0.683179 GTCCAAAGCCCATACCACCC 60.683 60.000 0.00 0.00 0.00 4.61
2781 4722 1.029947 CGTCCAAAGCCCATACCACC 61.030 60.000 0.00 0.00 0.00 4.61
2782 4723 0.035820 TCGTCCAAAGCCCATACCAC 60.036 55.000 0.00 0.00 0.00 4.16
2783 4724 0.251916 CTCGTCCAAAGCCCATACCA 59.748 55.000 0.00 0.00 0.00 3.25
2784 4725 0.539986 TCTCGTCCAAAGCCCATACC 59.460 55.000 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.