Multiple sequence alignment - TraesCS3D01G346000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G346000 chr3D 100.000 5646 0 0 1 5646 457396478 457402123 0.000000e+00 10427.0
1 TraesCS3D01G346000 chr3D 82.182 825 84 29 2806 3580 457398294 457399105 0.000000e+00 651.0
2 TraesCS3D01G346000 chr3D 82.182 825 84 29 1817 2628 457399283 457400057 0.000000e+00 651.0
3 TraesCS3D01G346000 chr3D 77.386 482 49 29 3718 4150 457399339 457399809 1.220000e-56 231.0
4 TraesCS3D01G346000 chr3D 77.386 482 49 29 2862 3332 457400195 457400627 1.220000e-56 231.0
5 TraesCS3D01G346000 chr3D 89.610 154 15 1 3572 3725 457399151 457399303 1.610000e-45 195.0
6 TraesCS3D01G346000 chr3D 89.610 154 15 1 2674 2826 457400049 457400202 1.610000e-45 195.0
7 TraesCS3D01G346000 chr3D 80.460 174 31 3 3479 3652 457398031 457398201 4.590000e-26 130.0
8 TraesCS3D01G346000 chr3D 80.571 175 29 5 1554 1724 457399956 457400129 4.590000e-26 130.0
9 TraesCS3D01G346000 chr3D 87.931 116 6 8 4294 4405 457400882 457400771 4.590000e-26 130.0
10 TraesCS3D01G346000 chr3D 90.909 99 1 3 4301 4392 587947371 587947468 5.940000e-25 126.0
11 TraesCS3D01G346000 chr3D 100.000 57 0 0 4228 4284 457400761 457400817 7.740000e-19 106.0
12 TraesCS3D01G346000 chr3D 79.592 147 22 5 3718 3861 457398355 457398496 1.290000e-16 99.0
13 TraesCS3D01G346000 chr3D 79.592 147 22 5 1878 2019 457400195 457400338 1.290000e-16 99.0
14 TraesCS3D01G346000 chr3D 95.000 40 1 1 4245 4284 587947371 587947409 1.700000e-05 62.1
15 TraesCS3D01G346000 chr3B 92.960 1179 57 10 735 1906 604766552 604767711 0.000000e+00 1694.0
16 TraesCS3D01G346000 chr3B 97.040 946 27 1 1898 2842 604769068 604770013 0.000000e+00 1591.0
17 TraesCS3D01G346000 chr3B 97.536 893 18 4 2835 3725 604770261 604771151 0.000000e+00 1524.0
18 TraesCS3D01G346000 chr3B 86.477 1161 101 36 1229 2357 605001991 605003127 0.000000e+00 1223.0
19 TraesCS3D01G346000 chr3B 88.021 768 28 23 4890 5646 605012359 605013073 0.000000e+00 850.0
20 TraesCS3D01G346000 chr3B 82.206 798 81 26 1846 2630 604770260 604771009 1.030000e-176 630.0
21 TraesCS3D01G346000 chr3B 81.720 744 78 24 2882 3580 604769068 604769798 8.210000e-158 568.0
22 TraesCS3D01G346000 chr3B 91.354 347 24 5 2675 3015 605003753 605004099 2.380000e-128 470.0
23 TraesCS3D01G346000 chr3B 79.128 642 75 34 2713 3330 605011222 605011828 6.860000e-104 388.0
24 TraesCS3D01G346000 chr3B 80.284 563 70 29 2798 3323 605002569 605003127 2.470000e-103 387.0
25 TraesCS3D01G346000 chr3B 88.785 321 23 10 915 1227 605001426 605001741 1.150000e-101 381.0
26 TraesCS3D01G346000 chr3B 82.766 441 55 17 2674 3108 604770999 604771424 1.920000e-99 374.0
27 TraesCS3D01G346000 chr3B 85.455 385 27 17 3362 3725 605003532 605003908 1.920000e-99 374.0
28 TraesCS3D01G346000 chr3B 86.930 329 23 4 3001 3319 605010660 605010978 9.000000e-93 351.0
29 TraesCS3D01G346000 chr3B 81.771 384 40 14 4476 4848 604773836 604774200 1.540000e-75 294.0
30 TraesCS3D01G346000 chr3B 86.590 261 17 5 340 600 604763463 604763705 7.210000e-69 272.0
31 TraesCS3D01G346000 chr3B 82.886 298 27 7 3718 4000 604771188 604771476 4.370000e-61 246.0
32 TraesCS3D01G346000 chr3B 76.786 504 52 31 3718 4171 604770289 604770777 7.360000e-54 222.0
33 TraesCS3D01G346000 chr3B 90.789 152 12 1 606 757 604774233 604774382 9.590000e-48 202.0
34 TraesCS3D01G346000 chr3B 81.132 265 22 10 4481 4729 605012117 605012369 2.690000e-43 187.0
35 TraesCS3D01G346000 chr3B 86.000 150 21 0 105 254 18500318 18500169 1.630000e-35 161.0
36 TraesCS3D01G346000 chr3B 85.000 160 18 2 3997 4155 604769387 604769541 2.110000e-34 158.0
37 TraesCS3D01G346000 chr3B 81.522 184 32 2 253 435 204373047 204372865 3.520000e-32 150.0
38 TraesCS3D01G346000 chr3B 84.314 153 22 2 3718 3869 605003946 605004097 1.270000e-31 148.0
39 TraesCS3D01G346000 chr3B 81.818 176 25 5 1554 1724 604770906 604771079 2.120000e-29 141.0
40 TraesCS3D01G346000 chr3B 91.262 103 8 1 3612 3714 605011223 605011324 7.630000e-29 139.0
41 TraesCS3D01G346000 chr3B 97.531 81 1 1 4310 4389 825250108 825250028 2.740000e-28 137.0
42 TraesCS3D01G346000 chr3B 96.429 84 2 1 4310 4392 825250029 825250112 2.740000e-28 137.0
43 TraesCS3D01G346000 chr3B 85.185 135 11 2 3984 4118 604771644 604771769 4.590000e-26 130.0
44 TraesCS3D01G346000 chr3B 80.208 192 22 9 1560 1739 605003659 605003846 4.590000e-26 130.0
45 TraesCS3D01G346000 chr3B 87.611 113 11 3 631 743 604766231 604766340 1.650000e-25 128.0
46 TraesCS3D01G346000 chr3B 80.541 185 20 8 3479 3652 605002316 605002495 1.650000e-25 128.0
47 TraesCS3D01G346000 chr3B 82.857 140 12 3 4114 4245 604773532 604773667 1.290000e-21 115.0
48 TraesCS3D01G346000 chr3B 81.600 125 16 4 3740 3861 604769069 604769189 4.660000e-16 97.1
49 TraesCS3D01G346000 chr3B 96.429 56 1 1 3612 3667 671573809 671573755 2.170000e-14 91.6
50 TraesCS3D01G346000 chr3B 92.188 64 3 2 2848 2910 671671186 671671124 7.790000e-14 89.8
51 TraesCS3D01G346000 chr3B 94.643 56 3 0 2848 2903 671573648 671573593 2.800000e-13 87.9
52 TraesCS3D01G346000 chr3B 95.000 40 2 0 1685 1724 605011224 605011263 4.720000e-06 63.9
53 TraesCS3D01G346000 chr3B 97.143 35 1 0 2330 2364 604773532 604773566 6.110000e-05 60.2
54 TraesCS3D01G346000 chr3A 88.619 1195 76 29 713 1865 600083343 600084519 0.000000e+00 1399.0
55 TraesCS3D01G346000 chr3A 85.984 1006 95 25 876 1849 600310892 600311883 0.000000e+00 1035.0
56 TraesCS3D01G346000 chr3A 85.189 925 77 25 2846 3725 600084615 600085524 0.000000e+00 894.0
57 TraesCS3D01G346000 chr3A 87.006 785 75 13 1859 2630 600084612 600085382 0.000000e+00 859.0
58 TraesCS3D01G346000 chr3A 85.320 797 47 31 4878 5646 600314884 600315638 0.000000e+00 760.0
59 TraesCS3D01G346000 chr3A 83.375 794 71 23 1859 2627 600311973 600312730 0.000000e+00 678.0
60 TraesCS3D01G346000 chr3A 81.370 934 81 42 2846 3722 600311976 600312873 0.000000e+00 675.0
61 TraesCS3D01G346000 chr3A 88.416 423 25 6 2907 3319 600313109 600313517 6.570000e-134 488.0
62 TraesCS3D01G346000 chr3A 88.283 367 29 7 3357 3714 600313620 600313981 1.450000e-115 427.0
63 TraesCS3D01G346000 chr3A 84.150 347 47 5 2674 3014 600313836 600314180 4.220000e-86 329.0
64 TraesCS3D01G346000 chr3A 85.366 328 33 7 2674 2999 600085372 600085686 5.460000e-85 326.0
65 TraesCS3D01G346000 chr3A 91.489 235 16 4 2675 2905 600312723 600312957 2.540000e-83 320.0
66 TraesCS3D01G346000 chr3A 87.454 271 21 7 3984 4245 600085949 600086215 3.310000e-77 300.0
67 TraesCS3D01G346000 chr3A 80.285 421 53 17 1935 2353 600313125 600313517 1.990000e-74 291.0
68 TraesCS3D01G346000 chr3A 81.419 296 23 12 4486 4771 600086403 600086676 4.430000e-51 213.0
69 TraesCS3D01G346000 chr3A 80.201 298 24 9 3718 4000 600085561 600085838 2.080000e-44 191.0
70 TraesCS3D01G346000 chr3A 86.364 154 14 3 2217 2364 600085962 600086114 1.630000e-35 161.0
71 TraesCS3D01G346000 chr3A 83.041 171 24 4 1554 1720 600313743 600313912 3.520000e-32 150.0
72 TraesCS3D01G346000 chr3A 85.235 149 16 2 4002 4149 600084972 600085115 1.270000e-31 148.0
73 TraesCS3D01G346000 chr3A 80.226 177 27 6 1554 1724 600085278 600085452 5.940000e-25 126.0
74 TraesCS3D01G346000 chr3A 94.828 58 3 0 2711 2768 646464438 646464381 2.170000e-14 91.6
75 TraesCS3D01G346000 chr3A 96.429 56 1 1 3612 3667 646464435 646464381 2.170000e-14 91.6
76 TraesCS3D01G346000 chr3A 96.429 56 1 1 3612 3667 646530367 646530313 2.170000e-14 91.6
77 TraesCS3D01G346000 chr3A 82.243 107 14 4 3764 3869 600313109 600313211 2.800000e-13 87.9
78 TraesCS3D01G346000 chr4D 95.686 255 9 2 4 258 280174442 280174190 5.270000e-110 409.0
79 TraesCS3D01G346000 chr4D 92.417 211 11 3 6 212 302347950 302348159 4.280000e-76 296.0
80 TraesCS3D01G346000 chr4D 95.370 108 5 0 6 113 280174548 280174441 7.520000e-39 172.0
81 TraesCS3D01G346000 chr7D 93.462 260 14 2 1 258 635163125 635163383 3.190000e-102 383.0
82 TraesCS3D01G346000 chr7D 91.566 166 13 1 93 257 633938093 633937928 1.580000e-55 228.0
83 TraesCS3D01G346000 chr7D 92.473 93 5 2 4299 4391 439239129 439239039 1.280000e-26 132.0
84 TraesCS3D01G346000 chr7A 92.549 255 15 2 7 258 24424284 24424537 4.160000e-96 363.0
85 TraesCS3D01G346000 chr5D 92.095 253 15 3 6 254 391046641 391046390 9.000000e-93 351.0
86 TraesCS3D01G346000 chr2B 84.047 257 39 2 2 258 794751464 794751718 4.370000e-61 246.0
87 TraesCS3D01G346000 chr2B 86.982 169 22 0 260 428 204870147 204869979 2.080000e-44 191.0
88 TraesCS3D01G346000 chr2B 85.714 154 22 0 101 254 152162613 152162460 4.530000e-36 163.0
89 TraesCS3D01G346000 chr2B 83.721 172 24 2 257 428 440229436 440229269 5.850000e-35 159.0
90 TraesCS3D01G346000 chr2B 94.505 91 3 2 4302 4391 111604721 111604632 7.630000e-29 139.0
91 TraesCS3D01G346000 chr2B 94.872 39 1 1 4246 4284 55203863 55203900 6.110000e-05 60.2
92 TraesCS3D01G346000 chr6B 81.343 268 32 13 7 258 612273797 612274062 9.590000e-48 202.0
93 TraesCS3D01G346000 chr6B 95.402 87 3 1 4306 4391 30310326 30310412 2.740000e-28 137.0
94 TraesCS3D01G346000 chr1A 87.574 169 21 0 257 425 277828043 277828211 4.460000e-46 196.0
95 TraesCS3D01G346000 chr5A 85.799 169 24 0 257 425 411627176 411627344 4.490000e-41 180.0
96 TraesCS3D01G346000 chr5A 83.529 170 28 0 256 425 660552255 660552424 5.850000e-35 159.0
97 TraesCS3D01G346000 chr2A 84.483 174 25 2 255 428 432599346 432599175 2.700000e-38 171.0
98 TraesCS3D01G346000 chr2A 92.683 41 2 1 4244 4284 725910436 725910397 2.200000e-04 58.4
99 TraesCS3D01G346000 chr5B 80.814 172 32 1 257 428 499689317 499689487 3.550000e-27 134.0
100 TraesCS3D01G346000 chr6D 93.333 90 4 2 4300 4388 207267942 207268030 1.280000e-26 132.0
101 TraesCS3D01G346000 chr4B 81.690 142 14 4 4254 4389 282239924 282239789 2.150000e-19 108.0
102 TraesCS3D01G346000 chr2D 100.000 41 0 0 24 64 141027385 141027345 6.070000e-10 76.8
103 TraesCS3D01G346000 chr1D 100.000 35 0 0 4250 4284 26599971 26600005 1.310000e-06 65.8
104 TraesCS3D01G346000 chr1D 92.683 41 2 1 4245 4284 160423947 160423907 2.200000e-04 58.4
105 TraesCS3D01G346000 chr1B 91.667 48 2 2 4238 4284 345408290 345408244 1.310000e-06 65.8
106 TraesCS3D01G346000 chr4A 94.872 39 0 2 4247 4284 724508404 724508367 6.110000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G346000 chr3D 457396478 457402123 5645 False 10427.000000 10427 100.000000 1 5646 1 chr3D.!!$F1 5645
1 TraesCS3D01G346000 chr3D 457398031 457400817 2786 False 247.090909 651 83.506455 1554 4284 11 chr3D.!!$F2 2730
2 TraesCS3D01G346000 chr3B 604763463 604774382 10919 False 469.238889 1694 86.348000 340 4848 18 chr3B.!!$F2 4508
3 TraesCS3D01G346000 chr3B 605001426 605004099 2673 False 405.125000 1223 84.677250 915 3869 8 chr3B.!!$F3 2954
4 TraesCS3D01G346000 chr3B 605010660 605013073 2413 False 329.816667 850 86.912167 1685 5646 6 chr3B.!!$F4 3961
5 TraesCS3D01G346000 chr3A 600310892 600315638 4746 False 476.445455 1035 84.905091 876 5646 11 chr3A.!!$F2 4770
6 TraesCS3D01G346000 chr3A 600083343 600086676 3333 False 461.700000 1399 84.707900 713 4771 10 chr3A.!!$F1 4058

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
120 121 0.035152 CTTGGCCCATCAGCTACACA 60.035 55.000 0.00 0.0 0.00 3.72 F
297 298 0.035739 GACCTTTCTACCGGGTTGCA 59.964 55.000 4.31 0.0 33.01 4.08 F
303 304 0.036765 TCTACCGGGTTGCACACATC 60.037 55.000 4.31 0.0 0.00 3.06 F
733 3229 0.107361 TACGAGAGAGATGCACCGGA 60.107 55.000 9.46 0.0 0.00 5.14 F
917 3655 2.041405 CACTCCTCCCCCTCCCTC 60.041 72.222 0.00 0.0 0.00 4.30 F
918 3656 2.204705 ACTCCTCCCCCTCCCTCT 60.205 66.667 0.00 0.0 0.00 3.69 F
4040 9935 2.224450 ACAGGAGTTCTAAACCAACCCG 60.224 50.000 0.00 0.0 0.00 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1216 3965 1.227664 CGGAGAGGGCTCTAGTCCA 59.772 63.158 13.72 0.0 43.78 4.02 R
1268 4285 1.248785 ACGAGAACTTGAGCGGCCTA 61.249 55.000 0.00 0.0 0.00 3.93 R
1374 4391 4.796231 CTCCGTCGCCCCGTCAAG 62.796 72.222 0.00 0.0 0.00 3.02 R
3465 9072 9.157104 CCAGGTTAAAGTAACAACACAATTTTT 57.843 29.630 0.96 0.0 40.39 1.94 R
4040 9935 0.543174 AGGACAGGACAGGACAGGAC 60.543 60.000 0.00 0.0 0.00 3.85 R
4041 9936 1.006043 CTAGGACAGGACAGGACAGGA 59.994 57.143 0.00 0.0 0.00 3.86 R
5300 13214 0.106419 GGAGGGATCGTGAGGAGAGT 60.106 60.000 0.00 0.0 0.00 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.861375 TTTTTGTCGCGCGGAAAAG 58.139 47.368 31.69 0.00 0.00 2.27
25 26 0.592754 TTTTTGTCGCGCGGAAAAGG 60.593 50.000 31.69 0.00 0.00 3.11
26 27 1.437772 TTTTGTCGCGCGGAAAAGGA 61.438 50.000 31.69 13.31 0.00 3.36
27 28 1.437772 TTTGTCGCGCGGAAAAGGAA 61.438 50.000 31.69 12.20 0.00 3.36
28 29 1.437772 TTGTCGCGCGGAAAAGGAAA 61.438 50.000 31.69 3.44 0.00 3.13
29 30 1.439858 GTCGCGCGGAAAAGGAAAC 60.440 57.895 31.69 13.59 0.00 2.78
30 31 2.498887 CGCGCGGAAAAGGAAACG 60.499 61.111 24.84 0.00 0.00 3.60
31 32 2.940561 GCGCGGAAAAGGAAACGA 59.059 55.556 8.83 0.00 0.00 3.85
32 33 1.280444 GCGCGGAAAAGGAAACGAA 59.720 52.632 8.83 0.00 0.00 3.85
33 34 0.317186 GCGCGGAAAAGGAAACGAAA 60.317 50.000 8.83 0.00 0.00 3.46
34 35 1.391787 CGCGGAAAAGGAAACGAAAC 58.608 50.000 0.00 0.00 0.00 2.78
35 36 1.268133 CGCGGAAAAGGAAACGAAACA 60.268 47.619 0.00 0.00 0.00 2.83
36 37 2.791849 CGCGGAAAAGGAAACGAAACAA 60.792 45.455 0.00 0.00 0.00 2.83
37 38 2.532723 GCGGAAAAGGAAACGAAACAAC 59.467 45.455 0.00 0.00 0.00 3.32
38 39 2.779471 CGGAAAAGGAAACGAAACAACG 59.221 45.455 0.00 0.00 39.31 4.10
39 40 3.110358 GGAAAAGGAAACGAAACAACGG 58.890 45.455 0.00 0.00 37.61 4.44
40 41 2.855660 AAAGGAAACGAAACAACGGG 57.144 45.000 0.00 0.00 37.61 5.28
41 42 0.382873 AAGGAAACGAAACAACGGGC 59.617 50.000 0.00 0.00 37.61 6.13
42 43 1.369568 GGAAACGAAACAACGGGCG 60.370 57.895 0.00 0.00 37.61 6.13
43 44 1.369568 GAAACGAAACAACGGGCGG 60.370 57.895 0.00 0.00 37.61 6.13
44 45 2.720561 GAAACGAAACAACGGGCGGG 62.721 60.000 0.00 0.00 37.61 6.13
45 46 4.550697 ACGAAACAACGGGCGGGT 62.551 61.111 0.00 0.00 37.61 5.28
46 47 3.281395 CGAAACAACGGGCGGGTT 61.281 61.111 0.00 0.00 0.00 4.11
68 69 3.161450 GGCCGGCCCAGTCTATCA 61.161 66.667 36.64 0.00 0.00 2.15
69 70 2.742116 GGCCGGCCCAGTCTATCAA 61.742 63.158 36.64 0.00 0.00 2.57
70 71 1.227674 GCCGGCCCAGTCTATCAAG 60.228 63.158 18.11 0.00 0.00 3.02
71 72 1.227674 CCGGCCCAGTCTATCAAGC 60.228 63.158 0.00 0.00 0.00 4.01
72 73 1.227674 CGGCCCAGTCTATCAAGCC 60.228 63.158 0.00 0.00 37.03 4.35
73 74 1.690219 CGGCCCAGTCTATCAAGCCT 61.690 60.000 0.00 0.00 38.27 4.58
74 75 0.179034 GGCCCAGTCTATCAAGCCTG 60.179 60.000 0.00 0.00 37.42 4.85
75 76 0.543749 GCCCAGTCTATCAAGCCTGT 59.456 55.000 0.00 0.00 26.14 4.00
76 77 1.745141 GCCCAGTCTATCAAGCCTGTG 60.745 57.143 0.00 0.00 26.14 3.66
77 78 1.661341 CCAGTCTATCAAGCCTGTGC 58.339 55.000 0.00 0.00 37.95 4.57
78 79 1.284657 CAGTCTATCAAGCCTGTGCG 58.715 55.000 0.00 0.00 44.33 5.34
79 80 0.898320 AGTCTATCAAGCCTGTGCGT 59.102 50.000 0.00 0.00 44.33 5.24
80 81 1.276421 AGTCTATCAAGCCTGTGCGTT 59.724 47.619 0.00 0.00 44.33 4.84
81 82 1.394917 GTCTATCAAGCCTGTGCGTTG 59.605 52.381 0.00 0.00 44.33 4.10
82 83 1.275010 TCTATCAAGCCTGTGCGTTGA 59.725 47.619 0.00 0.00 44.33 3.18
83 84 1.662629 CTATCAAGCCTGTGCGTTGAG 59.337 52.381 0.00 0.00 44.33 3.02
84 85 0.250467 ATCAAGCCTGTGCGTTGAGT 60.250 50.000 0.00 0.00 44.33 3.41
85 86 0.463654 TCAAGCCTGTGCGTTGAGTT 60.464 50.000 0.00 0.00 44.33 3.01
86 87 0.317269 CAAGCCTGTGCGTTGAGTTG 60.317 55.000 0.00 0.00 44.33 3.16
87 88 2.050985 GCCTGTGCGTTGAGTTGC 60.051 61.111 0.00 0.00 0.00 4.17
88 89 2.546494 GCCTGTGCGTTGAGTTGCT 61.546 57.895 0.00 0.00 0.00 3.91
89 90 1.280746 CCTGTGCGTTGAGTTGCTG 59.719 57.895 0.00 0.00 0.00 4.41
90 91 1.159713 CCTGTGCGTTGAGTTGCTGA 61.160 55.000 0.00 0.00 0.00 4.26
91 92 0.870393 CTGTGCGTTGAGTTGCTGAT 59.130 50.000 0.00 0.00 0.00 2.90
92 93 2.068519 CTGTGCGTTGAGTTGCTGATA 58.931 47.619 0.00 0.00 0.00 2.15
93 94 2.674852 CTGTGCGTTGAGTTGCTGATAT 59.325 45.455 0.00 0.00 0.00 1.63
94 95 2.416202 TGTGCGTTGAGTTGCTGATATG 59.584 45.455 0.00 0.00 0.00 1.78
95 96 1.398041 TGCGTTGAGTTGCTGATATGC 59.602 47.619 0.00 0.00 0.00 3.14
96 97 1.268234 GCGTTGAGTTGCTGATATGCC 60.268 52.381 0.00 0.00 0.00 4.40
97 98 1.004610 CGTTGAGTTGCTGATATGCCG 60.005 52.381 0.00 0.00 0.00 5.69
98 99 1.016627 TTGAGTTGCTGATATGCCGC 58.983 50.000 0.00 0.00 0.00 6.53
99 100 0.815213 TGAGTTGCTGATATGCCGCC 60.815 55.000 0.00 0.00 0.00 6.13
100 101 1.510480 GAGTTGCTGATATGCCGCCC 61.510 60.000 0.00 0.00 0.00 6.13
101 102 2.203337 TTGCTGATATGCCGCCCC 60.203 61.111 0.00 0.00 0.00 5.80
102 103 2.756042 TTGCTGATATGCCGCCCCT 61.756 57.895 0.00 0.00 0.00 4.79
103 104 2.113986 GCTGATATGCCGCCCCTT 59.886 61.111 0.00 0.00 0.00 3.95
104 105 2.263741 GCTGATATGCCGCCCCTTG 61.264 63.158 0.00 0.00 0.00 3.61
105 106 1.601759 CTGATATGCCGCCCCTTGG 60.602 63.158 0.00 0.00 0.00 3.61
115 116 3.747579 CCCCTTGGCCCATCAGCT 61.748 66.667 0.00 0.00 0.00 4.24
116 117 2.386100 CCCCTTGGCCCATCAGCTA 61.386 63.158 0.00 0.00 0.00 3.32
117 118 1.152881 CCCTTGGCCCATCAGCTAC 60.153 63.158 0.00 0.00 0.00 3.58
118 119 1.609239 CCTTGGCCCATCAGCTACA 59.391 57.895 0.00 0.00 0.00 2.74
119 120 0.749454 CCTTGGCCCATCAGCTACAC 60.749 60.000 0.00 0.00 0.00 2.90
120 121 0.035152 CTTGGCCCATCAGCTACACA 60.035 55.000 0.00 0.00 0.00 3.72
121 122 0.403655 TTGGCCCATCAGCTACACAA 59.596 50.000 0.00 0.00 0.00 3.33
122 123 0.403655 TGGCCCATCAGCTACACAAA 59.596 50.000 0.00 0.00 0.00 2.83
123 124 1.005805 TGGCCCATCAGCTACACAAAT 59.994 47.619 0.00 0.00 0.00 2.32
124 125 1.678101 GGCCCATCAGCTACACAAATC 59.322 52.381 0.00 0.00 0.00 2.17
125 126 1.678101 GCCCATCAGCTACACAAATCC 59.322 52.381 0.00 0.00 0.00 3.01
126 127 2.301346 CCCATCAGCTACACAAATCCC 58.699 52.381 0.00 0.00 0.00 3.85
127 128 1.942657 CCATCAGCTACACAAATCCCG 59.057 52.381 0.00 0.00 0.00 5.14
128 129 1.942657 CATCAGCTACACAAATCCCGG 59.057 52.381 0.00 0.00 0.00 5.73
129 130 0.981183 TCAGCTACACAAATCCCGGT 59.019 50.000 0.00 0.00 0.00 5.28
130 131 1.349688 TCAGCTACACAAATCCCGGTT 59.650 47.619 0.00 0.00 0.00 4.44
131 132 2.568062 TCAGCTACACAAATCCCGGTTA 59.432 45.455 0.00 0.00 0.00 2.85
132 133 3.008157 TCAGCTACACAAATCCCGGTTAA 59.992 43.478 0.00 0.00 0.00 2.01
133 134 3.126343 CAGCTACACAAATCCCGGTTAAC 59.874 47.826 0.00 0.00 0.00 2.01
134 135 3.008704 AGCTACACAAATCCCGGTTAACT 59.991 43.478 5.42 0.00 0.00 2.24
135 136 3.126343 GCTACACAAATCCCGGTTAACTG 59.874 47.826 7.51 7.51 0.00 3.16
136 137 3.217681 ACACAAATCCCGGTTAACTGT 57.782 42.857 13.35 1.37 0.00 3.55
137 138 4.354893 ACACAAATCCCGGTTAACTGTA 57.645 40.909 13.35 1.70 0.00 2.74
138 139 4.320870 ACACAAATCCCGGTTAACTGTAG 58.679 43.478 13.35 4.71 0.00 2.74
139 140 3.126343 CACAAATCCCGGTTAACTGTAGC 59.874 47.826 13.35 0.00 0.00 3.58
140 141 2.681344 CAAATCCCGGTTAACTGTAGCC 59.319 50.000 13.35 0.00 0.00 3.93
141 142 1.575419 ATCCCGGTTAACTGTAGCCA 58.425 50.000 13.35 0.00 30.09 4.75
142 143 0.899720 TCCCGGTTAACTGTAGCCAG 59.100 55.000 13.35 0.00 44.68 4.85
143 144 0.107848 CCCGGTTAACTGTAGCCAGG 60.108 60.000 13.35 2.54 43.36 4.45
144 145 0.899720 CCGGTTAACTGTAGCCAGGA 59.100 55.000 13.35 0.00 43.36 3.86
145 146 1.485066 CCGGTTAACTGTAGCCAGGAT 59.515 52.381 13.35 0.00 43.36 3.24
146 147 2.093128 CCGGTTAACTGTAGCCAGGATT 60.093 50.000 13.35 0.00 43.36 3.01
147 148 3.606687 CGGTTAACTGTAGCCAGGATTT 58.393 45.455 6.25 0.00 43.36 2.17
148 149 4.383335 CCGGTTAACTGTAGCCAGGATTTA 60.383 45.833 13.35 0.00 43.36 1.40
149 150 5.180271 CGGTTAACTGTAGCCAGGATTTAA 58.820 41.667 6.25 0.00 43.36 1.52
150 151 5.820947 CGGTTAACTGTAGCCAGGATTTAAT 59.179 40.000 6.25 0.00 43.36 1.40
151 152 6.317893 CGGTTAACTGTAGCCAGGATTTAATT 59.682 38.462 6.25 0.00 43.36 1.40
152 153 7.148137 CGGTTAACTGTAGCCAGGATTTAATTT 60.148 37.037 6.25 0.00 43.36 1.82
153 154 9.181061 GGTTAACTGTAGCCAGGATTTAATTTA 57.819 33.333 5.42 0.00 43.36 1.40
156 157 8.507524 AACTGTAGCCAGGATTTAATTTAGAC 57.492 34.615 0.00 0.00 43.36 2.59
157 158 7.054751 ACTGTAGCCAGGATTTAATTTAGACC 58.945 38.462 0.00 0.00 43.36 3.85
158 159 6.053005 TGTAGCCAGGATTTAATTTAGACCG 58.947 40.000 0.00 0.00 0.00 4.79
159 160 4.461198 AGCCAGGATTTAATTTAGACCGG 58.539 43.478 0.00 0.00 0.00 5.28
160 161 3.568430 GCCAGGATTTAATTTAGACCGGG 59.432 47.826 6.32 0.00 36.23 5.73
161 162 4.687769 GCCAGGATTTAATTTAGACCGGGA 60.688 45.833 6.32 0.00 35.41 5.14
162 163 5.631119 CCAGGATTTAATTTAGACCGGGAT 58.369 41.667 6.32 0.00 35.41 3.85
163 164 6.068670 CCAGGATTTAATTTAGACCGGGATT 58.931 40.000 6.32 0.46 35.41 3.01
164 165 6.016276 CCAGGATTTAATTTAGACCGGGATTG 60.016 42.308 6.32 0.00 35.41 2.67
165 166 5.535030 AGGATTTAATTTAGACCGGGATTGC 59.465 40.000 6.32 0.00 0.00 3.56
166 167 5.278808 GGATTTAATTTAGACCGGGATTGCC 60.279 44.000 6.32 0.00 0.00 4.52
167 168 4.513406 TTAATTTAGACCGGGATTGCCT 57.487 40.909 6.32 0.00 0.00 4.75
168 169 5.633655 TTAATTTAGACCGGGATTGCCTA 57.366 39.130 6.32 0.00 0.00 3.93
169 170 4.513406 AATTTAGACCGGGATTGCCTAA 57.487 40.909 6.32 0.71 0.00 2.69
170 171 4.724279 ATTTAGACCGGGATTGCCTAAT 57.276 40.909 6.32 0.00 0.00 1.73
171 172 4.513406 TTTAGACCGGGATTGCCTAATT 57.487 40.909 6.32 0.00 0.00 1.40
172 173 4.513406 TTAGACCGGGATTGCCTAATTT 57.487 40.909 6.32 0.00 0.00 1.82
173 174 5.633655 TTAGACCGGGATTGCCTAATTTA 57.366 39.130 6.32 0.00 0.00 1.40
174 175 4.086706 AGACCGGGATTGCCTAATTTAG 57.913 45.455 6.32 0.00 0.00 1.85
176 177 2.158519 ACCGGGATTGCCTAATTTAGGG 60.159 50.000 21.32 6.98 46.32 3.53
177 178 2.158519 CCGGGATTGCCTAATTTAGGGT 60.159 50.000 21.32 0.00 46.32 4.34
178 179 2.884639 CGGGATTGCCTAATTTAGGGTG 59.115 50.000 21.32 0.08 46.32 4.61
179 180 2.628178 GGGATTGCCTAATTTAGGGTGC 59.372 50.000 21.32 9.67 46.32 5.01
180 181 3.295973 GGATTGCCTAATTTAGGGTGCA 58.704 45.455 21.32 11.86 46.32 4.57
181 182 3.704061 GGATTGCCTAATTTAGGGTGCAA 59.296 43.478 21.32 18.37 46.32 4.08
182 183 4.344968 GGATTGCCTAATTTAGGGTGCAAT 59.655 41.667 21.33 21.33 46.32 3.56
183 184 5.509670 GGATTGCCTAATTTAGGGTGCAATC 60.510 44.000 28.53 28.53 46.32 2.67
184 185 2.948979 TGCCTAATTTAGGGTGCAATCG 59.051 45.455 21.32 0.00 46.32 3.34
185 186 3.211045 GCCTAATTTAGGGTGCAATCGA 58.789 45.455 21.32 0.00 46.32 3.59
186 187 3.003378 GCCTAATTTAGGGTGCAATCGAC 59.997 47.826 21.32 0.25 46.32 4.20
187 188 3.564225 CCTAATTTAGGGTGCAATCGACC 59.436 47.826 13.82 0.00 42.42 4.79
188 189 1.663695 ATTTAGGGTGCAATCGACCG 58.336 50.000 0.00 0.00 33.89 4.79
189 190 0.391927 TTTAGGGTGCAATCGACCGG 60.392 55.000 0.00 0.00 33.89 5.28
190 191 2.246761 TTAGGGTGCAATCGACCGGG 62.247 60.000 6.32 0.00 33.89 5.73
191 192 4.090588 GGGTGCAATCGACCGGGA 62.091 66.667 6.32 0.00 33.89 5.14
192 193 2.189521 GGTGCAATCGACCGGGAT 59.810 61.111 6.32 0.00 0.00 3.85
193 194 1.451387 GGTGCAATCGACCGGGATT 60.451 57.895 6.32 2.83 37.11 3.01
194 195 1.029947 GGTGCAATCGACCGGGATTT 61.030 55.000 6.32 0.00 34.50 2.17
195 196 0.808755 GTGCAATCGACCGGGATTTT 59.191 50.000 6.32 0.00 34.50 1.82
196 197 0.808125 TGCAATCGACCGGGATTTTG 59.192 50.000 6.32 5.74 34.50 2.44
197 198 1.091537 GCAATCGACCGGGATTTTGA 58.908 50.000 6.32 0.00 34.50 2.69
198 199 1.202143 GCAATCGACCGGGATTTTGAC 60.202 52.381 6.32 0.00 34.50 3.18
199 200 2.356135 CAATCGACCGGGATTTTGACT 58.644 47.619 6.32 0.00 34.50 3.41
200 201 2.747446 CAATCGACCGGGATTTTGACTT 59.253 45.455 6.32 0.00 34.50 3.01
201 202 1.803334 TCGACCGGGATTTTGACTTG 58.197 50.000 6.32 0.00 0.00 3.16
202 203 1.345089 TCGACCGGGATTTTGACTTGA 59.655 47.619 6.32 0.00 0.00 3.02
203 204 2.147958 CGACCGGGATTTTGACTTGAA 58.852 47.619 6.32 0.00 0.00 2.69
204 205 2.159627 CGACCGGGATTTTGACTTGAAG 59.840 50.000 6.32 0.00 0.00 3.02
205 206 2.488153 GACCGGGATTTTGACTTGAAGG 59.512 50.000 6.32 0.00 0.00 3.46
206 207 2.158519 ACCGGGATTTTGACTTGAAGGT 60.159 45.455 6.32 0.00 0.00 3.50
207 208 2.890945 CCGGGATTTTGACTTGAAGGTT 59.109 45.455 0.00 0.00 0.00 3.50
208 209 3.057526 CCGGGATTTTGACTTGAAGGTTC 60.058 47.826 0.00 0.00 0.00 3.62
209 210 3.568007 CGGGATTTTGACTTGAAGGTTCA 59.432 43.478 0.00 0.00 34.92 3.18
210 211 4.218417 CGGGATTTTGACTTGAAGGTTCAT 59.782 41.667 0.00 0.00 37.00 2.57
211 212 5.278957 CGGGATTTTGACTTGAAGGTTCATT 60.279 40.000 0.00 0.00 37.00 2.57
212 213 6.524734 GGGATTTTGACTTGAAGGTTCATTT 58.475 36.000 0.00 0.00 37.00 2.32
213 214 6.646653 GGGATTTTGACTTGAAGGTTCATTTC 59.353 38.462 0.00 0.00 37.00 2.17
214 215 7.209475 GGATTTTGACTTGAAGGTTCATTTCA 58.791 34.615 0.00 0.00 37.00 2.69
215 216 7.169813 GGATTTTGACTTGAAGGTTCATTTCAC 59.830 37.037 0.00 0.00 37.00 3.18
216 217 5.514274 TTGACTTGAAGGTTCATTTCACC 57.486 39.130 0.00 0.00 37.00 4.02
217 218 3.563808 TGACTTGAAGGTTCATTTCACCG 59.436 43.478 0.00 0.00 39.56 4.94
218 219 3.813166 GACTTGAAGGTTCATTTCACCGA 59.187 43.478 0.00 0.00 39.56 4.69
219 220 4.204012 ACTTGAAGGTTCATTTCACCGAA 58.796 39.130 0.00 0.00 39.56 4.30
220 221 4.036380 ACTTGAAGGTTCATTTCACCGAAC 59.964 41.667 0.00 0.00 39.56 3.95
221 222 3.546724 TGAAGGTTCATTTCACCGAACA 58.453 40.909 0.00 0.00 42.67 3.18
222 223 3.314080 TGAAGGTTCATTTCACCGAACAC 59.686 43.478 0.00 0.00 42.67 3.32
223 224 2.227194 AGGTTCATTTCACCGAACACC 58.773 47.619 0.00 0.00 42.67 4.16
224 225 2.158667 AGGTTCATTTCACCGAACACCT 60.159 45.455 0.00 0.00 42.67 4.00
225 226 3.071892 AGGTTCATTTCACCGAACACCTA 59.928 43.478 0.00 0.00 42.67 3.08
226 227 3.187842 GGTTCATTTCACCGAACACCTAC 59.812 47.826 0.00 0.00 42.67 3.18
227 228 3.755112 TCATTTCACCGAACACCTACA 57.245 42.857 0.00 0.00 0.00 2.74
228 229 4.074627 TCATTTCACCGAACACCTACAA 57.925 40.909 0.00 0.00 0.00 2.41
229 230 4.452825 TCATTTCACCGAACACCTACAAA 58.547 39.130 0.00 0.00 0.00 2.83
230 231 5.067273 TCATTTCACCGAACACCTACAAAT 58.933 37.500 0.00 0.00 0.00 2.32
231 232 5.533154 TCATTTCACCGAACACCTACAAATT 59.467 36.000 0.00 0.00 0.00 1.82
232 233 5.427036 TTTCACCGAACACCTACAAATTC 57.573 39.130 0.00 0.00 0.00 2.17
233 234 4.074627 TCACCGAACACCTACAAATTCA 57.925 40.909 0.00 0.00 0.00 2.57
234 235 4.062293 TCACCGAACACCTACAAATTCAG 58.938 43.478 0.00 0.00 0.00 3.02
235 236 3.188460 CACCGAACACCTACAAATTCAGG 59.812 47.826 0.00 0.36 37.97 3.86
236 237 2.747446 CCGAACACCTACAAATTCAGGG 59.253 50.000 5.87 0.00 36.15 4.45
237 238 3.408634 CGAACACCTACAAATTCAGGGT 58.591 45.455 5.87 0.00 36.15 4.34
238 239 3.818773 CGAACACCTACAAATTCAGGGTT 59.181 43.478 5.87 6.51 36.15 4.11
239 240 4.277423 CGAACACCTACAAATTCAGGGTTT 59.723 41.667 5.87 0.00 36.15 3.27
240 241 5.470777 CGAACACCTACAAATTCAGGGTTTA 59.529 40.000 5.87 0.00 36.15 2.01
241 242 6.016943 CGAACACCTACAAATTCAGGGTTTAA 60.017 38.462 5.87 0.00 36.15 1.52
242 243 7.468906 CGAACACCTACAAATTCAGGGTTTAAA 60.469 37.037 5.87 0.00 36.15 1.52
243 244 7.663043 ACACCTACAAATTCAGGGTTTAAAA 57.337 32.000 0.00 0.00 36.15 1.52
244 245 8.257602 ACACCTACAAATTCAGGGTTTAAAAT 57.742 30.769 0.00 0.00 36.15 1.82
245 246 8.710239 ACACCTACAAATTCAGGGTTTAAAATT 58.290 29.630 0.00 0.00 36.15 1.82
246 247 8.987890 CACCTACAAATTCAGGGTTTAAAATTG 58.012 33.333 0.00 0.00 36.15 2.32
247 248 8.929487 ACCTACAAATTCAGGGTTTAAAATTGA 58.071 29.630 0.00 0.00 36.15 2.57
248 249 9.203421 CCTACAAATTCAGGGTTTAAAATTGAC 57.797 33.333 0.00 0.00 0.00 3.18
249 250 9.981114 CTACAAATTCAGGGTTTAAAATTGACT 57.019 29.630 0.00 0.00 0.00 3.41
251 252 9.679661 ACAAATTCAGGGTTTAAAATTGACTTT 57.320 25.926 0.00 0.00 0.00 2.66
278 279 7.751047 TCCTCGAAATAAGATCAAAACTACG 57.249 36.000 0.00 0.00 0.00 3.51
279 280 7.541162 TCCTCGAAATAAGATCAAAACTACGA 58.459 34.615 0.00 0.00 0.00 3.43
280 281 7.487189 TCCTCGAAATAAGATCAAAACTACGAC 59.513 37.037 0.00 0.00 0.00 4.34
281 282 7.254017 CCTCGAAATAAGATCAAAACTACGACC 60.254 40.741 0.00 0.00 0.00 4.79
282 283 7.318141 TCGAAATAAGATCAAAACTACGACCT 58.682 34.615 0.00 0.00 0.00 3.85
283 284 7.816031 TCGAAATAAGATCAAAACTACGACCTT 59.184 33.333 0.00 0.00 0.00 3.50
284 285 8.440833 CGAAATAAGATCAAAACTACGACCTTT 58.559 33.333 0.00 0.00 0.00 3.11
285 286 9.756461 GAAATAAGATCAAAACTACGACCTTTC 57.244 33.333 0.00 0.00 0.00 2.62
286 287 9.503399 AAATAAGATCAAAACTACGACCTTTCT 57.497 29.630 0.00 0.00 0.00 2.52
288 289 7.886405 AAGATCAAAACTACGACCTTTCTAC 57.114 36.000 0.00 0.00 0.00 2.59
289 290 6.396450 AGATCAAAACTACGACCTTTCTACC 58.604 40.000 0.00 0.00 0.00 3.18
290 291 4.549458 TCAAAACTACGACCTTTCTACCG 58.451 43.478 0.00 0.00 0.00 4.02
291 292 3.582714 AAACTACGACCTTTCTACCGG 57.417 47.619 0.00 0.00 0.00 5.28
292 293 1.467920 ACTACGACCTTTCTACCGGG 58.532 55.000 6.32 0.00 0.00 5.73
293 294 1.272147 ACTACGACCTTTCTACCGGGT 60.272 52.381 6.32 4.46 35.89 5.28
294 295 1.821136 CTACGACCTTTCTACCGGGTT 59.179 52.381 4.31 0.00 33.01 4.11
295 296 0.319405 ACGACCTTTCTACCGGGTTG 59.681 55.000 4.31 2.95 39.66 3.77
296 297 1.017701 CGACCTTTCTACCGGGTTGC 61.018 60.000 4.31 0.00 33.01 4.17
297 298 0.035739 GACCTTTCTACCGGGTTGCA 59.964 55.000 4.31 0.00 33.01 4.08
298 299 0.250597 ACCTTTCTACCGGGTTGCAC 60.251 55.000 4.31 0.00 0.00 4.57
299 300 0.250553 CCTTTCTACCGGGTTGCACA 60.251 55.000 4.31 0.00 0.00 4.57
300 301 0.872388 CTTTCTACCGGGTTGCACAC 59.128 55.000 4.31 0.00 0.00 3.82
301 302 0.180642 TTTCTACCGGGTTGCACACA 59.819 50.000 4.31 0.00 0.00 3.72
302 303 0.398696 TTCTACCGGGTTGCACACAT 59.601 50.000 4.31 0.00 0.00 3.21
303 304 0.036765 TCTACCGGGTTGCACACATC 60.037 55.000 4.31 0.00 0.00 3.06
304 305 1.003112 TACCGGGTTGCACACATCC 60.003 57.895 4.31 0.00 35.25 3.51
305 306 2.789845 TACCGGGTTGCACACATCCG 62.790 60.000 4.31 1.39 40.51 4.18
306 307 2.358125 CGGGTTGCACACATCCGA 60.358 61.111 2.23 0.00 42.22 4.55
307 308 1.745115 CGGGTTGCACACATCCGAT 60.745 57.895 2.23 0.00 42.22 4.18
308 309 1.802636 GGGTTGCACACATCCGATG 59.197 57.895 6.84 6.84 36.63 3.84
309 310 0.676466 GGGTTGCACACATCCGATGA 60.676 55.000 15.47 0.00 36.63 2.92
310 311 0.447801 GGTTGCACACATCCGATGAC 59.552 55.000 15.47 1.57 0.00 3.06
311 312 1.155889 GTTGCACACATCCGATGACA 58.844 50.000 15.47 4.99 0.00 3.58
312 313 1.535028 GTTGCACACATCCGATGACAA 59.465 47.619 15.47 10.16 0.00 3.18
313 314 1.155889 TGCACACATCCGATGACAAC 58.844 50.000 15.47 2.89 0.00 3.32
314 315 1.270785 TGCACACATCCGATGACAACT 60.271 47.619 15.47 0.00 0.00 3.16
315 316 2.028567 TGCACACATCCGATGACAACTA 60.029 45.455 15.47 0.00 0.00 2.24
316 317 3.000041 GCACACATCCGATGACAACTAA 59.000 45.455 15.47 0.00 0.00 2.24
317 318 3.181520 GCACACATCCGATGACAACTAAC 60.182 47.826 15.47 0.00 0.00 2.34
318 319 3.370978 CACACATCCGATGACAACTAACC 59.629 47.826 15.47 0.00 0.00 2.85
319 320 3.007506 ACACATCCGATGACAACTAACCA 59.992 43.478 15.47 0.00 0.00 3.67
320 321 4.000325 CACATCCGATGACAACTAACCAA 59.000 43.478 15.47 0.00 0.00 3.67
321 322 4.000988 ACATCCGATGACAACTAACCAAC 58.999 43.478 15.47 0.00 0.00 3.77
322 323 3.755112 TCCGATGACAACTAACCAACA 57.245 42.857 0.00 0.00 0.00 3.33
323 324 4.074627 TCCGATGACAACTAACCAACAA 57.925 40.909 0.00 0.00 0.00 2.83
324 325 4.062293 TCCGATGACAACTAACCAACAAG 58.938 43.478 0.00 0.00 0.00 3.16
325 326 3.188460 CCGATGACAACTAACCAACAAGG 59.812 47.826 0.00 0.00 45.67 3.61
326 327 3.364964 CGATGACAACTAACCAACAAGGC 60.365 47.826 0.00 0.00 43.14 4.35
327 328 3.290948 TGACAACTAACCAACAAGGCT 57.709 42.857 0.00 0.00 43.14 4.58
328 329 3.626930 TGACAACTAACCAACAAGGCTT 58.373 40.909 0.00 0.00 43.14 4.35
329 330 3.630312 TGACAACTAACCAACAAGGCTTC 59.370 43.478 0.00 0.00 43.14 3.86
330 331 2.616842 ACAACTAACCAACAAGGCTTCG 59.383 45.455 0.00 0.00 43.14 3.79
331 332 1.235724 ACTAACCAACAAGGCTTCGC 58.764 50.000 0.00 0.00 43.14 4.70
341 342 2.125106 GGCTTCGCCGTCCAGAAT 60.125 61.111 0.00 0.00 39.62 2.40
352 353 1.760613 CGTCCAGAATTAGGCCCTACA 59.239 52.381 0.00 0.00 0.00 2.74
354 355 3.039011 GTCCAGAATTAGGCCCTACAGA 58.961 50.000 0.00 0.00 0.00 3.41
365 366 3.908103 AGGCCCTACAGAAAACTAGACAA 59.092 43.478 0.00 0.00 0.00 3.18
366 367 4.001652 GGCCCTACAGAAAACTAGACAAC 58.998 47.826 0.00 0.00 0.00 3.32
373 374 5.721232 ACAGAAAACTAGACAACCTATCGG 58.279 41.667 0.00 0.00 0.00 4.18
425 426 3.628008 AGAAAGCCAGATCATTGCATGA 58.372 40.909 0.00 0.00 44.55 3.07
428 429 2.022195 AGCCAGATCATTGCATGACAC 58.978 47.619 0.00 0.00 43.01 3.67
442 443 1.300697 GACACGGTTGAAGCGGTCT 60.301 57.895 21.16 2.31 44.33 3.85
450 451 3.531538 GGTTGAAGCGGTCTCATTATCA 58.468 45.455 0.00 0.00 0.00 2.15
453 454 4.046938 TGAAGCGGTCTCATTATCAGAC 57.953 45.455 0.00 0.00 39.78 3.51
471 472 2.912956 AGACATGTACATGGTGGAGGTT 59.087 45.455 33.32 14.60 42.91 3.50
489 490 1.452145 TTGGACAGCCGCAAAACCTC 61.452 55.000 0.00 0.00 36.79 3.85
492 493 3.373565 CAGCCGCAAAACCTCCCC 61.374 66.667 0.00 0.00 0.00 4.81
511 512 1.545582 CCAGATTTGATGCCGGTTTGT 59.454 47.619 1.90 0.00 0.00 2.83
526 527 2.093783 GGTTTGTAAGAGTTCGGATGCG 59.906 50.000 0.00 0.00 0.00 4.73
527 528 2.735134 GTTTGTAAGAGTTCGGATGCGT 59.265 45.455 6.49 0.00 0.00 5.24
531 532 2.386661 AAGAGTTCGGATGCGTGAAT 57.613 45.000 6.49 0.00 0.00 2.57
532 533 1.927895 AGAGTTCGGATGCGTGAATC 58.072 50.000 6.49 5.85 0.00 2.52
533 534 0.931005 GAGTTCGGATGCGTGAATCC 59.069 55.000 6.49 0.00 42.46 3.01
534 535 0.249120 AGTTCGGATGCGTGAATCCA 59.751 50.000 6.49 0.00 45.64 3.41
535 536 1.134401 AGTTCGGATGCGTGAATCCAT 60.134 47.619 6.49 0.00 45.64 3.41
536 537 1.670811 GTTCGGATGCGTGAATCCATT 59.329 47.619 6.49 0.00 45.64 3.16
537 538 1.581934 TCGGATGCGTGAATCCATTC 58.418 50.000 6.49 0.00 45.64 2.67
538 539 1.134551 TCGGATGCGTGAATCCATTCA 60.135 47.619 6.49 0.00 45.64 2.57
600 601 1.596752 ACACGCGTTGAAGATGCCA 60.597 52.632 10.22 0.00 36.93 4.92
642 657 3.198187 TGCGGATTTTGCAAAGCTG 57.802 47.368 18.43 16.67 39.87 4.24
672 3168 4.505217 CGCGTCATGGTTGCGCTC 62.505 66.667 9.73 1.18 45.67 5.03
675 3171 2.476051 GTCATGGTTGCGCTCGTG 59.524 61.111 9.73 10.18 0.00 4.35
690 3186 2.509336 GTGTACAGCGCCGCTCAT 60.509 61.111 9.54 2.47 36.40 2.90
733 3229 0.107361 TACGAGAGAGATGCACCGGA 60.107 55.000 9.46 0.00 0.00 5.14
793 3507 2.439338 GCACCACACCACACCACA 60.439 61.111 0.00 0.00 0.00 4.17
794 3508 2.770589 GCACCACACCACACCACAC 61.771 63.158 0.00 0.00 0.00 3.82
795 3509 2.118404 CACCACACCACACCACACC 61.118 63.158 0.00 0.00 0.00 4.16
840 3554 2.176045 GGAAAACGTTTGGGGATGGAT 58.824 47.619 15.46 0.00 0.00 3.41
916 3654 3.700350 CCACTCCTCCCCCTCCCT 61.700 72.222 0.00 0.00 0.00 4.20
917 3655 2.041405 CACTCCTCCCCCTCCCTC 60.041 72.222 0.00 0.00 0.00 4.30
918 3656 2.204705 ACTCCTCCCCCTCCCTCT 60.205 66.667 0.00 0.00 0.00 3.69
919 3657 2.329399 ACTCCTCCCCCTCCCTCTC 61.329 68.421 0.00 0.00 0.00 3.20
920 3658 3.036959 TCCTCCCCCTCCCTCTCC 61.037 72.222 0.00 0.00 0.00 3.71
921 3659 4.179599 CCTCCCCCTCCCTCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
922 3660 4.179599 CTCCCCCTCCCTCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
942 3686 4.785453 CCCCCTCCTCGCAGCAAC 62.785 72.222 0.00 0.00 0.00 4.17
943 3687 4.020617 CCCCTCCTCGCAGCAACA 62.021 66.667 0.00 0.00 0.00 3.33
1174 3921 2.548920 GGCATCCCTAGGTTCGATTCTG 60.549 54.545 8.29 0.00 0.00 3.02
1216 3965 4.871871 TCATCCTCTTCTACTCTGTCCT 57.128 45.455 0.00 0.00 0.00 3.85
1268 4285 6.183360 GGTTCTACATCATGAGATTGGAGAGT 60.183 42.308 9.21 0.00 29.75 3.24
3465 9072 8.070034 TCGTCTCTTTAGGGTGTGAAATTATA 57.930 34.615 0.00 0.00 0.00 0.98
4038 9933 5.479124 TCTACAGGAGTTCTAAACCAACC 57.521 43.478 0.00 0.00 0.00 3.77
4039 9934 3.503800 ACAGGAGTTCTAAACCAACCC 57.496 47.619 0.00 0.00 0.00 4.11
4040 9935 2.224450 ACAGGAGTTCTAAACCAACCCG 60.224 50.000 0.00 0.00 0.00 5.28
4041 9936 2.052468 AGGAGTTCTAAACCAACCCGT 58.948 47.619 0.00 0.00 0.00 5.28
4042 9937 2.038164 AGGAGTTCTAAACCAACCCGTC 59.962 50.000 0.00 0.00 0.00 4.79
4043 9938 2.420642 GAGTTCTAAACCAACCCGTCC 58.579 52.381 0.00 0.00 0.00 4.79
4044 9939 2.038164 GAGTTCTAAACCAACCCGTCCT 59.962 50.000 0.00 0.00 0.00 3.85
4045 9940 2.148768 GTTCTAAACCAACCCGTCCTG 58.851 52.381 0.00 0.00 0.00 3.86
4046 9941 1.426751 TCTAAACCAACCCGTCCTGT 58.573 50.000 0.00 0.00 0.00 4.00
4384 12081 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
4399 12096 5.625150 ACGGAGGGAGTACTAATTATACGT 58.375 41.667 0.00 0.00 0.00 3.57
4403 12113 7.254252 CGGAGGGAGTACTAATTATACGTATCG 60.254 44.444 12.24 0.00 0.00 2.92
4506 12326 2.093106 GGTTCTCTCGAGTCTAAGCCA 58.907 52.381 13.13 0.00 0.00 4.75
4523 12347 0.971386 CCAAGGGCATTTGCTTCACT 59.029 50.000 2.12 0.00 41.70 3.41
4524 12348 1.345415 CCAAGGGCATTTGCTTCACTT 59.655 47.619 2.12 0.49 41.70 3.16
4525 12349 2.409975 CAAGGGCATTTGCTTCACTTG 58.590 47.619 2.12 8.44 41.70 3.16
4526 12350 0.971386 AGGGCATTTGCTTCACTTGG 59.029 50.000 2.12 0.00 41.70 3.61
4527 12351 0.671472 GGGCATTTGCTTCACTTGGC 60.671 55.000 2.12 0.00 41.70 4.52
4528 12352 0.319405 GGCATTTGCTTCACTTGGCT 59.681 50.000 2.12 0.00 41.70 4.75
4529 12353 1.425412 GCATTTGCTTCACTTGGCTG 58.575 50.000 0.00 0.00 38.21 4.85
4570 12411 3.449918 TCCCATCTGACCATACTTGTGA 58.550 45.455 0.00 0.00 0.00 3.58
4582 12423 4.460382 CCATACTTGTGAAATCTGCAGGTT 59.540 41.667 15.13 10.91 0.00 3.50
4661 12506 0.389556 CTGAGACGCTGCATGTCACT 60.390 55.000 18.22 2.24 38.83 3.41
4662 12507 0.668401 TGAGACGCTGCATGTCACTG 60.668 55.000 18.22 0.00 38.83 3.66
4663 12508 0.389037 GAGACGCTGCATGTCACTGA 60.389 55.000 18.22 0.00 38.83 3.41
4665 12510 1.630244 GACGCTGCATGTCACTGACC 61.630 60.000 12.85 0.00 36.37 4.02
4666 12511 1.668793 CGCTGCATGTCACTGACCA 60.669 57.895 6.72 0.00 0.00 4.02
4667 12512 1.871772 GCTGCATGTCACTGACCAC 59.128 57.895 6.72 0.00 0.00 4.16
4669 12514 0.319813 CTGCATGTCACTGACCACGA 60.320 55.000 6.72 0.00 0.00 4.35
4670 12515 0.599991 TGCATGTCACTGACCACGAC 60.600 55.000 6.72 0.00 0.00 4.34
4672 12517 0.318441 CATGTCACTGACCACGACCT 59.682 55.000 6.72 0.00 0.00 3.85
4673 12518 1.544246 CATGTCACTGACCACGACCTA 59.456 52.381 6.72 0.00 0.00 3.08
4674 12519 1.919240 TGTCACTGACCACGACCTAT 58.081 50.000 6.72 0.00 0.00 2.57
4718 12563 2.805353 CTCACGGACGCTGTTCGG 60.805 66.667 12.72 3.84 39.09 4.30
4734 12583 2.040606 GGGCCCTGTCCCTCTGTA 59.959 66.667 17.04 0.00 43.13 2.74
4740 12589 1.071385 CCCTGTCCCTCTGTATGATGC 59.929 57.143 0.00 0.00 0.00 3.91
4743 12592 1.136891 TGTCCCTCTGTATGATGCACG 59.863 52.381 0.00 0.00 0.00 5.34
4789 12666 1.452025 CTGCAAGTCACGTGTACTTCG 59.548 52.381 22.30 18.91 34.99 3.79
4791 12668 2.033174 TGCAAGTCACGTGTACTTCGTA 59.967 45.455 22.30 16.51 39.55 3.43
4792 12669 2.403037 GCAAGTCACGTGTACTTCGTAC 59.597 50.000 22.30 10.09 39.55 3.67
4793 12670 2.584166 AGTCACGTGTACTTCGTACG 57.416 50.000 16.51 9.53 41.41 3.67
4794 12671 0.970606 GTCACGTGTACTTCGTACGC 59.029 55.000 16.51 7.46 43.48 4.42
4798 12675 0.453950 CGTGTACTTCGTACGCTGCT 60.454 55.000 11.24 0.00 44.36 4.24
4800 12677 0.169672 TGTACTTCGTACGCTGCTCC 59.830 55.000 11.24 0.00 41.41 4.70
4804 12681 1.270147 ACTTCGTACGCTGCTCCTTTT 60.270 47.619 11.24 0.00 0.00 2.27
4806 12683 1.144969 TCGTACGCTGCTCCTTTTTG 58.855 50.000 11.24 0.00 0.00 2.44
4812 12707 0.897401 GCTGCTCCTTTTTGGCTCCT 60.897 55.000 0.00 0.00 35.26 3.69
4815 12710 1.133513 TGCTCCTTTTTGGCTCCTTGA 60.134 47.619 0.00 0.00 35.26 3.02
4848 12747 1.663643 GTCGTTGTTTCTGCTGACACA 59.336 47.619 8.34 8.34 31.81 3.72
4857 12756 5.530543 TGTTTCTGCTGACACACATCATAAA 59.469 36.000 8.34 0.00 29.03 1.40
4858 12757 6.207221 TGTTTCTGCTGACACACATCATAAAT 59.793 34.615 8.34 0.00 29.03 1.40
4859 12758 6.822667 TTCTGCTGACACACATCATAAATT 57.177 33.333 0.00 0.00 0.00 1.82
4860 12759 6.426980 TCTGCTGACACACATCATAAATTC 57.573 37.500 0.00 0.00 0.00 2.17
4862 12761 6.656270 TCTGCTGACACACATCATAAATTCTT 59.344 34.615 0.00 0.00 0.00 2.52
4863 12762 7.823799 TCTGCTGACACACATCATAAATTCTTA 59.176 33.333 0.00 0.00 0.00 2.10
4864 12763 7.977904 TGCTGACACACATCATAAATTCTTAG 58.022 34.615 0.00 0.00 0.00 2.18
4865 12764 7.607607 TGCTGACACACATCATAAATTCTTAGT 59.392 33.333 0.00 0.00 0.00 2.24
4866 12765 9.098355 GCTGACACACATCATAAATTCTTAGTA 57.902 33.333 0.00 0.00 0.00 1.82
4868 12767 9.378551 TGACACACATCATAAATTCTTAGTACC 57.621 33.333 0.00 0.00 0.00 3.34
4870 12769 9.383519 ACACACATCATAAATTCTTAGTACCAG 57.616 33.333 0.00 0.00 0.00 4.00
4871 12770 8.830580 CACACATCATAAATTCTTAGTACCAGG 58.169 37.037 0.00 0.00 0.00 4.45
4873 12772 6.998673 ACATCATAAATTCTTAGTACCAGGCC 59.001 38.462 0.00 0.00 0.00 5.19
4874 12773 6.569127 TCATAAATTCTTAGTACCAGGCCA 57.431 37.500 5.01 0.00 0.00 5.36
4876 12775 7.054124 TCATAAATTCTTAGTACCAGGCCAAG 58.946 38.462 5.01 0.00 0.00 3.61
5150 13061 2.484264 GCGCTCCCGATTAATTAGCAAT 59.516 45.455 0.00 0.00 36.29 3.56
5299 13213 2.193087 TTTTAGCCCCCACTCGCTCC 62.193 60.000 0.00 0.00 36.53 4.70
5300 13214 3.916438 TTAGCCCCCACTCGCTCCA 62.916 63.158 0.00 0.00 36.53 3.86
5303 13217 3.775654 CCCCCACTCGCTCCACTC 61.776 72.222 0.00 0.00 0.00 3.51
5304 13218 2.681778 CCCCACTCGCTCCACTCT 60.682 66.667 0.00 0.00 0.00 3.24
5305 13219 2.716017 CCCCACTCGCTCCACTCTC 61.716 68.421 0.00 0.00 0.00 3.20
5306 13220 2.716017 CCCACTCGCTCCACTCTCC 61.716 68.421 0.00 0.00 0.00 3.71
5307 13221 1.680651 CCACTCGCTCCACTCTCCT 60.681 63.158 0.00 0.00 0.00 3.69
5388 13302 4.292178 GAGCTCCAGCCCCGATCG 62.292 72.222 8.51 8.51 43.38 3.69
5415 13341 0.987294 CCATGGTGAGGTCCAACTCT 59.013 55.000 2.57 0.00 41.09 3.24
5479 13405 0.674895 CCTTCCGCTTCCACTTCCAG 60.675 60.000 0.00 0.00 0.00 3.86
5484 13410 0.250295 CGCTTCCACTTCCAGTTCCA 60.250 55.000 0.00 0.00 0.00 3.53
5490 13416 1.073763 CCACTTCCAGTTCCATCCACA 59.926 52.381 0.00 0.00 0.00 4.17
5497 13423 0.693049 AGTTCCATCCACACCTCCAC 59.307 55.000 0.00 0.00 0.00 4.02
5498 13424 0.693049 GTTCCATCCACACCTCCACT 59.307 55.000 0.00 0.00 0.00 4.00
5499 13425 1.073923 GTTCCATCCACACCTCCACTT 59.926 52.381 0.00 0.00 0.00 3.16
5500 13426 1.444933 TCCATCCACACCTCCACTTT 58.555 50.000 0.00 0.00 0.00 2.66
5558 13484 1.201343 GCGGTTCATAGCTCGACTTC 58.799 55.000 0.00 0.00 0.00 3.01
5559 13485 1.202313 GCGGTTCATAGCTCGACTTCT 60.202 52.381 0.00 0.00 0.00 2.85
5564 13490 5.172205 GGTTCATAGCTCGACTTCTTTTCT 58.828 41.667 0.00 0.00 0.00 2.52
5565 13491 5.062809 GGTTCATAGCTCGACTTCTTTTCTG 59.937 44.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.592754 CCTTTTCCGCGCGACAAAAA 60.593 50.000 34.63 28.39 0.00 1.94
7 8 1.009449 CCTTTTCCGCGCGACAAAA 60.009 52.632 34.63 29.75 0.00 2.44
9 10 1.437772 TTTCCTTTTCCGCGCGACAA 61.438 50.000 34.63 20.77 0.00 3.18
10 11 1.888172 TTTCCTTTTCCGCGCGACA 60.888 52.632 34.63 15.21 0.00 4.35
11 12 1.439858 GTTTCCTTTTCCGCGCGAC 60.440 57.895 34.63 14.52 0.00 5.19
12 13 2.940561 GTTTCCTTTTCCGCGCGA 59.059 55.556 34.63 15.16 0.00 5.87
14 15 0.317186 TTTCGTTTCCTTTTCCGCGC 60.317 50.000 0.00 0.00 0.00 6.86
16 17 2.478547 TGTTTCGTTTCCTTTTCCGC 57.521 45.000 0.00 0.00 0.00 5.54
17 18 2.779471 CGTTGTTTCGTTTCCTTTTCCG 59.221 45.455 0.00 0.00 0.00 4.30
18 19 3.110358 CCGTTGTTTCGTTTCCTTTTCC 58.890 45.455 0.00 0.00 0.00 3.13
19 20 3.110358 CCCGTTGTTTCGTTTCCTTTTC 58.890 45.455 0.00 0.00 0.00 2.29
20 21 2.736081 GCCCGTTGTTTCGTTTCCTTTT 60.736 45.455 0.00 0.00 0.00 2.27
21 22 1.202325 GCCCGTTGTTTCGTTTCCTTT 60.202 47.619 0.00 0.00 0.00 3.11
22 23 0.382873 GCCCGTTGTTTCGTTTCCTT 59.617 50.000 0.00 0.00 0.00 3.36
23 24 1.778027 CGCCCGTTGTTTCGTTTCCT 61.778 55.000 0.00 0.00 0.00 3.36
24 25 1.369568 CGCCCGTTGTTTCGTTTCC 60.370 57.895 0.00 0.00 0.00 3.13
25 26 1.369568 CCGCCCGTTGTTTCGTTTC 60.370 57.895 0.00 0.00 0.00 2.78
26 27 2.716864 CCGCCCGTTGTTTCGTTT 59.283 55.556 0.00 0.00 0.00 3.60
27 28 3.281395 CCCGCCCGTTGTTTCGTT 61.281 61.111 0.00 0.00 0.00 3.85
28 29 4.550697 ACCCGCCCGTTGTTTCGT 62.551 61.111 0.00 0.00 0.00 3.85
29 30 3.281395 AACCCGCCCGTTGTTTCG 61.281 61.111 0.00 0.00 0.00 3.46
30 31 2.333581 CAACCCGCCCGTTGTTTC 59.666 61.111 3.01 0.00 38.64 2.78
31 32 3.220658 CCAACCCGCCCGTTGTTT 61.221 61.111 9.11 0.00 41.30 2.83
32 33 4.509580 ACCAACCCGCCCGTTGTT 62.510 61.111 9.11 0.00 41.30 2.83
51 52 2.666596 CTTGATAGACTGGGCCGGCC 62.667 65.000 38.57 38.57 0.00 6.13
52 53 1.227674 CTTGATAGACTGGGCCGGC 60.228 63.158 21.18 21.18 0.00 6.13
53 54 1.227674 GCTTGATAGACTGGGCCGG 60.228 63.158 11.83 11.83 0.00 6.13
54 55 1.227674 GGCTTGATAGACTGGGCCG 60.228 63.158 0.00 0.00 0.00 6.13
55 56 2.225792 AGGCTTGATAGACTGGGCC 58.774 57.895 0.00 0.00 38.73 5.80
60 61 0.898320 ACGCACAGGCTTGATAGACT 59.102 50.000 1.40 0.00 41.85 3.24
61 62 1.394917 CAACGCACAGGCTTGATAGAC 59.605 52.381 1.40 0.00 38.10 2.59
62 63 1.275010 TCAACGCACAGGCTTGATAGA 59.725 47.619 1.40 0.00 34.49 1.98
63 64 1.662629 CTCAACGCACAGGCTTGATAG 59.337 52.381 1.40 0.00 36.92 2.08
64 65 1.001974 ACTCAACGCACAGGCTTGATA 59.998 47.619 1.40 0.00 36.92 2.15
65 66 0.250467 ACTCAACGCACAGGCTTGAT 60.250 50.000 1.40 0.00 36.92 2.57
66 67 0.463654 AACTCAACGCACAGGCTTGA 60.464 50.000 1.40 0.00 36.46 3.02
67 68 0.317269 CAACTCAACGCACAGGCTTG 60.317 55.000 0.00 0.00 38.10 4.01
68 69 2.024918 CAACTCAACGCACAGGCTT 58.975 52.632 0.00 0.00 38.10 4.35
69 70 2.546494 GCAACTCAACGCACAGGCT 61.546 57.895 0.00 0.00 38.10 4.58
70 71 2.050985 GCAACTCAACGCACAGGC 60.051 61.111 0.00 0.00 0.00 4.85
71 72 1.159713 TCAGCAACTCAACGCACAGG 61.160 55.000 0.00 0.00 0.00 4.00
72 73 0.870393 ATCAGCAACTCAACGCACAG 59.130 50.000 0.00 0.00 0.00 3.66
73 74 2.162319 TATCAGCAACTCAACGCACA 57.838 45.000 0.00 0.00 0.00 4.57
74 75 2.789092 GCATATCAGCAACTCAACGCAC 60.789 50.000 0.00 0.00 0.00 5.34
75 76 1.398041 GCATATCAGCAACTCAACGCA 59.602 47.619 0.00 0.00 0.00 5.24
76 77 1.268234 GGCATATCAGCAACTCAACGC 60.268 52.381 0.00 0.00 35.83 4.84
77 78 1.004610 CGGCATATCAGCAACTCAACG 60.005 52.381 0.00 0.00 35.83 4.10
78 79 1.268234 GCGGCATATCAGCAACTCAAC 60.268 52.381 0.00 0.00 35.87 3.18
79 80 1.016627 GCGGCATATCAGCAACTCAA 58.983 50.000 0.00 0.00 35.87 3.02
80 81 0.815213 GGCGGCATATCAGCAACTCA 60.815 55.000 3.07 0.00 37.64 3.41
81 82 1.510480 GGGCGGCATATCAGCAACTC 61.510 60.000 12.47 0.00 37.64 3.01
82 83 1.526917 GGGCGGCATATCAGCAACT 60.527 57.895 12.47 0.00 37.64 3.16
83 84 2.555547 GGGGCGGCATATCAGCAAC 61.556 63.158 12.47 0.00 37.64 4.17
84 85 2.203337 GGGGCGGCATATCAGCAA 60.203 61.111 12.47 0.00 37.64 3.91
85 86 2.756042 AAGGGGCGGCATATCAGCA 61.756 57.895 12.47 0.00 37.64 4.41
86 87 2.113986 AAGGGGCGGCATATCAGC 59.886 61.111 12.47 0.00 35.03 4.26
87 88 1.601759 CCAAGGGGCGGCATATCAG 60.602 63.158 12.47 0.00 0.00 2.90
88 89 2.515398 CCAAGGGGCGGCATATCA 59.485 61.111 12.47 0.00 0.00 2.15
98 99 2.386100 TAGCTGATGGGCCAAGGGG 61.386 63.158 11.89 2.27 37.18 4.79
99 100 1.152881 GTAGCTGATGGGCCAAGGG 60.153 63.158 11.89 4.30 0.00 3.95
100 101 0.749454 GTGTAGCTGATGGGCCAAGG 60.749 60.000 11.89 4.71 0.00 3.61
101 102 0.035152 TGTGTAGCTGATGGGCCAAG 60.035 55.000 11.89 5.38 0.00 3.61
102 103 0.403655 TTGTGTAGCTGATGGGCCAA 59.596 50.000 11.89 0.00 0.00 4.52
103 104 0.403655 TTTGTGTAGCTGATGGGCCA 59.596 50.000 9.61 9.61 0.00 5.36
104 105 1.678101 GATTTGTGTAGCTGATGGGCC 59.322 52.381 0.00 0.00 0.00 5.80
105 106 1.678101 GGATTTGTGTAGCTGATGGGC 59.322 52.381 0.00 0.00 0.00 5.36
106 107 2.301346 GGGATTTGTGTAGCTGATGGG 58.699 52.381 0.00 0.00 0.00 4.00
107 108 1.942657 CGGGATTTGTGTAGCTGATGG 59.057 52.381 0.00 0.00 0.00 3.51
108 109 1.942657 CCGGGATTTGTGTAGCTGATG 59.057 52.381 0.00 0.00 0.00 3.07
109 110 1.559682 ACCGGGATTTGTGTAGCTGAT 59.440 47.619 6.32 0.00 0.00 2.90
110 111 0.981183 ACCGGGATTTGTGTAGCTGA 59.019 50.000 6.32 0.00 0.00 4.26
111 112 1.821216 AACCGGGATTTGTGTAGCTG 58.179 50.000 6.32 0.00 0.00 4.24
112 113 3.008704 AGTTAACCGGGATTTGTGTAGCT 59.991 43.478 6.32 0.00 0.00 3.32
113 114 3.126343 CAGTTAACCGGGATTTGTGTAGC 59.874 47.826 6.32 0.00 0.00 3.58
114 115 4.320870 ACAGTTAACCGGGATTTGTGTAG 58.679 43.478 6.32 0.00 0.00 2.74
115 116 4.354893 ACAGTTAACCGGGATTTGTGTA 57.645 40.909 6.32 0.00 0.00 2.90
116 117 3.217681 ACAGTTAACCGGGATTTGTGT 57.782 42.857 6.32 0.00 0.00 3.72
117 118 3.126343 GCTACAGTTAACCGGGATTTGTG 59.874 47.826 6.32 0.00 0.00 3.33
118 119 3.340928 GCTACAGTTAACCGGGATTTGT 58.659 45.455 6.32 6.26 0.00 2.83
119 120 2.681344 GGCTACAGTTAACCGGGATTTG 59.319 50.000 6.32 0.00 0.00 2.32
120 121 2.306512 TGGCTACAGTTAACCGGGATTT 59.693 45.455 6.32 0.00 0.00 2.17
121 122 1.910671 TGGCTACAGTTAACCGGGATT 59.089 47.619 6.32 0.00 0.00 3.01
122 123 1.485066 CTGGCTACAGTTAACCGGGAT 59.515 52.381 6.32 0.00 39.92 3.85
123 124 0.899720 CTGGCTACAGTTAACCGGGA 59.100 55.000 6.32 0.00 39.92 5.14
124 125 0.107848 CCTGGCTACAGTTAACCGGG 60.108 60.000 6.32 0.00 43.36 5.73
125 126 0.899720 TCCTGGCTACAGTTAACCGG 59.100 55.000 0.00 0.00 43.36 5.28
126 127 2.981859 ATCCTGGCTACAGTTAACCG 57.018 50.000 0.88 0.00 43.36 4.44
127 128 7.640597 AATTAAATCCTGGCTACAGTTAACC 57.359 36.000 0.88 0.00 43.36 2.85
130 131 9.609346 GTCTAAATTAAATCCTGGCTACAGTTA 57.391 33.333 0.00 0.00 43.36 2.24
131 132 7.556635 GGTCTAAATTAAATCCTGGCTACAGTT 59.443 37.037 0.00 0.00 43.36 3.16
132 133 7.054751 GGTCTAAATTAAATCCTGGCTACAGT 58.945 38.462 0.00 0.00 43.36 3.55
133 134 6.202954 CGGTCTAAATTAAATCCTGGCTACAG 59.797 42.308 0.00 0.00 44.51 2.74
134 135 6.053005 CGGTCTAAATTAAATCCTGGCTACA 58.947 40.000 0.00 0.00 0.00 2.74
135 136 5.469084 CCGGTCTAAATTAAATCCTGGCTAC 59.531 44.000 0.00 0.00 0.00 3.58
136 137 5.455612 CCCGGTCTAAATTAAATCCTGGCTA 60.456 44.000 0.00 0.00 0.00 3.93
137 138 4.461198 CCGGTCTAAATTAAATCCTGGCT 58.539 43.478 0.00 0.00 0.00 4.75
138 139 3.568430 CCCGGTCTAAATTAAATCCTGGC 59.432 47.826 0.00 0.00 0.00 4.85
139 140 5.043737 TCCCGGTCTAAATTAAATCCTGG 57.956 43.478 0.00 0.00 0.00 4.45
140 141 6.515035 GCAATCCCGGTCTAAATTAAATCCTG 60.515 42.308 0.00 0.00 0.00 3.86
141 142 5.535030 GCAATCCCGGTCTAAATTAAATCCT 59.465 40.000 0.00 0.00 0.00 3.24
142 143 5.278808 GGCAATCCCGGTCTAAATTAAATCC 60.279 44.000 0.00 0.00 0.00 3.01
143 144 5.535030 AGGCAATCCCGGTCTAAATTAAATC 59.465 40.000 0.00 0.00 39.21 2.17
144 145 5.454966 AGGCAATCCCGGTCTAAATTAAAT 58.545 37.500 0.00 0.00 39.21 1.40
145 146 4.862371 AGGCAATCCCGGTCTAAATTAAA 58.138 39.130 0.00 0.00 39.21 1.52
146 147 4.513406 AGGCAATCCCGGTCTAAATTAA 57.487 40.909 0.00 0.00 39.21 1.40
147 148 5.633655 TTAGGCAATCCCGGTCTAAATTA 57.366 39.130 0.00 0.00 39.21 1.40
148 149 4.513406 TTAGGCAATCCCGGTCTAAATT 57.487 40.909 0.00 0.00 39.21 1.82
149 150 4.724279 ATTAGGCAATCCCGGTCTAAAT 57.276 40.909 0.00 0.00 36.19 1.40
150 151 4.513406 AATTAGGCAATCCCGGTCTAAA 57.487 40.909 0.00 0.00 36.19 1.85
151 152 4.513406 AAATTAGGCAATCCCGGTCTAA 57.487 40.909 0.00 0.00 36.92 2.10
152 153 4.041198 CCTAAATTAGGCAATCCCGGTCTA 59.959 45.833 6.07 0.00 39.48 2.59
153 154 3.181443 CCTAAATTAGGCAATCCCGGTCT 60.181 47.826 6.07 0.00 39.48 3.85
154 155 3.146847 CCTAAATTAGGCAATCCCGGTC 58.853 50.000 6.07 0.00 39.48 4.79
155 156 2.158519 CCCTAAATTAGGCAATCCCGGT 60.159 50.000 13.46 0.00 44.86 5.28
156 157 2.158519 ACCCTAAATTAGGCAATCCCGG 60.159 50.000 13.46 0.00 44.86 5.73
157 158 2.884639 CACCCTAAATTAGGCAATCCCG 59.115 50.000 13.46 1.07 44.86 5.14
158 159 2.628178 GCACCCTAAATTAGGCAATCCC 59.372 50.000 13.46 0.00 44.86 3.85
159 160 3.295973 TGCACCCTAAATTAGGCAATCC 58.704 45.455 13.46 1.02 44.86 3.01
160 161 5.532557 GATTGCACCCTAAATTAGGCAATC 58.467 41.667 25.04 25.04 44.86 2.67
161 162 4.037923 CGATTGCACCCTAAATTAGGCAAT 59.962 41.667 20.14 20.14 44.86 3.56
162 163 3.380004 CGATTGCACCCTAAATTAGGCAA 59.620 43.478 13.46 13.96 44.86 4.52
163 164 2.948979 CGATTGCACCCTAAATTAGGCA 59.051 45.455 13.46 5.99 44.86 4.75
164 165 3.003378 GTCGATTGCACCCTAAATTAGGC 59.997 47.826 13.46 3.42 44.86 3.93
165 166 3.564225 GGTCGATTGCACCCTAAATTAGG 59.436 47.826 12.02 12.02 45.81 2.69
166 167 3.247648 CGGTCGATTGCACCCTAAATTAG 59.752 47.826 0.00 0.00 0.00 1.73
167 168 3.199677 CGGTCGATTGCACCCTAAATTA 58.800 45.455 0.00 0.00 0.00 1.40
168 169 2.014128 CGGTCGATTGCACCCTAAATT 58.986 47.619 0.00 0.00 0.00 1.82
169 170 1.663695 CGGTCGATTGCACCCTAAAT 58.336 50.000 0.00 0.00 0.00 1.40
170 171 0.391927 CCGGTCGATTGCACCCTAAA 60.392 55.000 0.00 0.00 0.00 1.85
171 172 1.219664 CCGGTCGATTGCACCCTAA 59.780 57.895 0.00 0.00 0.00 2.69
172 173 2.727392 CCCGGTCGATTGCACCCTA 61.727 63.158 0.00 0.00 0.00 3.53
173 174 4.096003 CCCGGTCGATTGCACCCT 62.096 66.667 0.00 0.00 0.00 4.34
174 175 2.886730 AATCCCGGTCGATTGCACCC 62.887 60.000 0.00 0.00 31.19 4.61
175 176 1.029947 AAATCCCGGTCGATTGCACC 61.030 55.000 6.70 0.00 32.75 5.01
176 177 0.808755 AAAATCCCGGTCGATTGCAC 59.191 50.000 6.70 0.00 32.75 4.57
177 178 0.808125 CAAAATCCCGGTCGATTGCA 59.192 50.000 6.70 0.00 32.75 4.08
178 179 1.091537 TCAAAATCCCGGTCGATTGC 58.908 50.000 6.70 0.00 32.75 3.56
179 180 2.356135 AGTCAAAATCCCGGTCGATTG 58.644 47.619 6.70 4.23 32.75 2.67
180 181 2.747446 CAAGTCAAAATCCCGGTCGATT 59.253 45.455 0.00 0.00 33.84 3.34
181 182 2.027561 TCAAGTCAAAATCCCGGTCGAT 60.028 45.455 0.00 0.00 0.00 3.59
182 183 1.345089 TCAAGTCAAAATCCCGGTCGA 59.655 47.619 0.00 0.00 0.00 4.20
183 184 1.803334 TCAAGTCAAAATCCCGGTCG 58.197 50.000 0.00 0.00 0.00 4.79
184 185 2.488153 CCTTCAAGTCAAAATCCCGGTC 59.512 50.000 0.00 0.00 0.00 4.79
185 186 2.158519 ACCTTCAAGTCAAAATCCCGGT 60.159 45.455 0.00 0.00 0.00 5.28
186 187 2.514803 ACCTTCAAGTCAAAATCCCGG 58.485 47.619 0.00 0.00 0.00 5.73
187 188 3.568007 TGAACCTTCAAGTCAAAATCCCG 59.432 43.478 0.00 0.00 33.55 5.14
188 189 5.728637 ATGAACCTTCAAGTCAAAATCCC 57.271 39.130 0.00 0.00 41.13 3.85
189 190 7.169813 GTGAAATGAACCTTCAAGTCAAAATCC 59.830 37.037 5.88 0.00 41.13 3.01
190 191 7.169813 GGTGAAATGAACCTTCAAGTCAAAATC 59.830 37.037 5.88 0.00 41.13 2.17
191 192 6.986231 GGTGAAATGAACCTTCAAGTCAAAAT 59.014 34.615 5.88 0.00 41.13 1.82
192 193 6.337356 GGTGAAATGAACCTTCAAGTCAAAA 58.663 36.000 5.88 0.00 41.13 2.44
193 194 5.449862 CGGTGAAATGAACCTTCAAGTCAAA 60.450 40.000 5.88 0.00 41.13 2.69
194 195 4.036262 CGGTGAAATGAACCTTCAAGTCAA 59.964 41.667 5.88 0.00 41.13 3.18
195 196 3.563808 CGGTGAAATGAACCTTCAAGTCA 59.436 43.478 0.00 0.00 41.13 3.41
196 197 3.813166 TCGGTGAAATGAACCTTCAAGTC 59.187 43.478 0.00 0.00 41.13 3.01
197 198 3.815809 TCGGTGAAATGAACCTTCAAGT 58.184 40.909 0.00 0.00 41.13 3.16
198 199 4.036262 TGTTCGGTGAAATGAACCTTCAAG 59.964 41.667 2.98 0.00 42.93 3.02
199 200 3.948473 TGTTCGGTGAAATGAACCTTCAA 59.052 39.130 2.98 0.00 42.93 2.69
200 201 3.314080 GTGTTCGGTGAAATGAACCTTCA 59.686 43.478 2.98 0.00 42.93 3.02
201 202 3.304458 GGTGTTCGGTGAAATGAACCTTC 60.304 47.826 2.98 0.00 42.93 3.46
202 203 2.621526 GGTGTTCGGTGAAATGAACCTT 59.378 45.455 2.98 0.00 42.93 3.50
203 204 2.158667 AGGTGTTCGGTGAAATGAACCT 60.159 45.455 2.98 0.00 42.93 3.50
204 205 2.227194 AGGTGTTCGGTGAAATGAACC 58.773 47.619 2.98 0.00 42.93 3.62
205 206 3.810941 TGTAGGTGTTCGGTGAAATGAAC 59.189 43.478 0.00 0.00 43.67 3.18
206 207 4.074627 TGTAGGTGTTCGGTGAAATGAA 57.925 40.909 0.00 0.00 0.00 2.57
207 208 3.755112 TGTAGGTGTTCGGTGAAATGA 57.245 42.857 0.00 0.00 0.00 2.57
208 209 4.822036 TTTGTAGGTGTTCGGTGAAATG 57.178 40.909 0.00 0.00 0.00 2.32
209 210 5.533154 TGAATTTGTAGGTGTTCGGTGAAAT 59.467 36.000 0.00 0.00 0.00 2.17
210 211 4.882427 TGAATTTGTAGGTGTTCGGTGAAA 59.118 37.500 0.00 0.00 0.00 2.69
211 212 4.452825 TGAATTTGTAGGTGTTCGGTGAA 58.547 39.130 0.00 0.00 0.00 3.18
212 213 4.062293 CTGAATTTGTAGGTGTTCGGTGA 58.938 43.478 0.00 0.00 0.00 4.02
213 214 3.188460 CCTGAATTTGTAGGTGTTCGGTG 59.812 47.826 0.00 0.00 0.00 4.94
214 215 3.408634 CCTGAATTTGTAGGTGTTCGGT 58.591 45.455 0.00 0.00 0.00 4.69
215 216 2.747446 CCCTGAATTTGTAGGTGTTCGG 59.253 50.000 0.00 0.00 31.99 4.30
216 217 3.408634 ACCCTGAATTTGTAGGTGTTCG 58.591 45.455 0.00 0.00 31.99 3.95
217 218 5.784578 AAACCCTGAATTTGTAGGTGTTC 57.215 39.130 0.00 0.00 31.48 3.18
218 219 7.663043 TTTAAACCCTGAATTTGTAGGTGTT 57.337 32.000 0.00 0.00 32.48 3.32
219 220 7.663043 TTTTAAACCCTGAATTTGTAGGTGT 57.337 32.000 0.00 0.00 31.99 4.16
220 221 8.987890 CAATTTTAAACCCTGAATTTGTAGGTG 58.012 33.333 0.00 0.00 31.99 4.00
221 222 8.929487 TCAATTTTAAACCCTGAATTTGTAGGT 58.071 29.630 0.00 0.00 31.99 3.08
222 223 9.203421 GTCAATTTTAAACCCTGAATTTGTAGG 57.797 33.333 0.00 0.00 0.00 3.18
223 224 9.981114 AGTCAATTTTAAACCCTGAATTTGTAG 57.019 29.630 0.00 0.00 0.00 2.74
225 226 9.679661 AAAGTCAATTTTAAACCCTGAATTTGT 57.320 25.926 13.61 0.00 34.22 2.83
252 253 8.653338 CGTAGTTTTGATCTTATTTCGAGGAAA 58.347 33.333 0.00 0.00 35.94 3.13
253 254 8.030692 TCGTAGTTTTGATCTTATTTCGAGGAA 58.969 33.333 0.00 0.00 0.00 3.36
254 255 7.487189 GTCGTAGTTTTGATCTTATTTCGAGGA 59.513 37.037 0.00 0.00 0.00 3.71
255 256 7.254017 GGTCGTAGTTTTGATCTTATTTCGAGG 60.254 40.741 0.00 0.00 0.00 4.63
256 257 7.488471 AGGTCGTAGTTTTGATCTTATTTCGAG 59.512 37.037 0.00 0.00 0.00 4.04
257 258 7.318141 AGGTCGTAGTTTTGATCTTATTTCGA 58.682 34.615 0.00 0.00 0.00 3.71
258 259 7.521509 AGGTCGTAGTTTTGATCTTATTTCG 57.478 36.000 0.00 0.00 0.00 3.46
259 260 9.756461 GAAAGGTCGTAGTTTTGATCTTATTTC 57.244 33.333 0.00 0.00 34.55 2.17
260 261 9.503399 AGAAAGGTCGTAGTTTTGATCTTATTT 57.497 29.630 0.00 0.00 34.55 1.40
262 263 9.583765 GTAGAAAGGTCGTAGTTTTGATCTTAT 57.416 33.333 0.00 0.00 34.55 1.73
263 264 8.031277 GGTAGAAAGGTCGTAGTTTTGATCTTA 58.969 37.037 0.00 0.00 34.55 2.10
264 265 6.872547 GGTAGAAAGGTCGTAGTTTTGATCTT 59.127 38.462 0.00 0.00 37.15 2.40
265 266 6.396450 GGTAGAAAGGTCGTAGTTTTGATCT 58.604 40.000 0.00 0.00 0.00 2.75
266 267 5.287992 CGGTAGAAAGGTCGTAGTTTTGATC 59.712 44.000 0.00 0.00 0.00 2.92
267 268 5.166398 CGGTAGAAAGGTCGTAGTTTTGAT 58.834 41.667 0.00 0.00 0.00 2.57
268 269 4.549458 CGGTAGAAAGGTCGTAGTTTTGA 58.451 43.478 0.00 0.00 0.00 2.69
269 270 3.676646 CCGGTAGAAAGGTCGTAGTTTTG 59.323 47.826 0.00 0.00 0.00 2.44
270 271 3.306294 CCCGGTAGAAAGGTCGTAGTTTT 60.306 47.826 0.00 0.00 0.00 2.43
271 272 2.232208 CCCGGTAGAAAGGTCGTAGTTT 59.768 50.000 0.00 0.00 0.00 2.66
272 273 1.821136 CCCGGTAGAAAGGTCGTAGTT 59.179 52.381 0.00 0.00 0.00 2.24
273 274 1.272147 ACCCGGTAGAAAGGTCGTAGT 60.272 52.381 0.00 0.00 0.00 2.73
274 275 1.467920 ACCCGGTAGAAAGGTCGTAG 58.532 55.000 0.00 0.00 0.00 3.51
275 276 1.545582 CAACCCGGTAGAAAGGTCGTA 59.454 52.381 0.00 0.00 32.00 3.43
276 277 0.319405 CAACCCGGTAGAAAGGTCGT 59.681 55.000 0.00 0.00 32.00 4.34
277 278 1.017701 GCAACCCGGTAGAAAGGTCG 61.018 60.000 0.00 0.00 32.00 4.79
278 279 0.035739 TGCAACCCGGTAGAAAGGTC 59.964 55.000 0.00 0.00 32.00 3.85
279 280 0.250597 GTGCAACCCGGTAGAAAGGT 60.251 55.000 0.00 0.00 34.60 3.50
280 281 0.250553 TGTGCAACCCGGTAGAAAGG 60.251 55.000 0.00 0.00 34.36 3.11
281 282 0.872388 GTGTGCAACCCGGTAGAAAG 59.128 55.000 0.00 0.00 34.36 2.62
282 283 0.180642 TGTGTGCAACCCGGTAGAAA 59.819 50.000 0.00 0.00 34.36 2.52
283 284 0.398696 ATGTGTGCAACCCGGTAGAA 59.601 50.000 0.00 0.00 34.36 2.10
284 285 0.036765 GATGTGTGCAACCCGGTAGA 60.037 55.000 0.00 0.00 34.36 2.59
285 286 1.024579 GGATGTGTGCAACCCGGTAG 61.025 60.000 0.00 0.00 34.36 3.18
286 287 1.003112 GGATGTGTGCAACCCGGTA 60.003 57.895 0.00 0.00 34.36 4.02
287 288 2.282180 GGATGTGTGCAACCCGGT 60.282 61.111 0.00 0.00 34.36 5.28
288 289 3.430862 CGGATGTGTGCAACCCGG 61.431 66.667 0.00 0.00 34.44 5.73
289 290 1.745115 ATCGGATGTGTGCAACCCG 60.745 57.895 0.00 0.00 41.36 5.28
290 291 0.676466 TCATCGGATGTGTGCAACCC 60.676 55.000 17.01 0.00 34.44 4.11
291 292 0.447801 GTCATCGGATGTGTGCAACC 59.552 55.000 17.01 0.00 34.36 3.77
292 293 1.155889 TGTCATCGGATGTGTGCAAC 58.844 50.000 17.01 7.88 37.35 4.17
293 294 1.535028 GTTGTCATCGGATGTGTGCAA 59.465 47.619 17.01 14.09 0.00 4.08
294 295 1.155889 GTTGTCATCGGATGTGTGCA 58.844 50.000 17.01 9.68 0.00 4.57
295 296 1.442769 AGTTGTCATCGGATGTGTGC 58.557 50.000 17.01 7.38 0.00 4.57
296 297 3.370978 GGTTAGTTGTCATCGGATGTGTG 59.629 47.826 17.01 0.00 0.00 3.82
297 298 3.007506 TGGTTAGTTGTCATCGGATGTGT 59.992 43.478 17.01 2.57 0.00 3.72
298 299 3.595173 TGGTTAGTTGTCATCGGATGTG 58.405 45.455 17.01 0.00 0.00 3.21
299 300 3.973206 TGGTTAGTTGTCATCGGATGT 57.027 42.857 17.01 0.90 0.00 3.06
300 301 4.000325 TGTTGGTTAGTTGTCATCGGATG 59.000 43.478 11.79 11.79 0.00 3.51
301 302 4.280436 TGTTGGTTAGTTGTCATCGGAT 57.720 40.909 0.00 0.00 0.00 4.18
302 303 3.755112 TGTTGGTTAGTTGTCATCGGA 57.245 42.857 0.00 0.00 0.00 4.55
303 304 3.188460 CCTTGTTGGTTAGTTGTCATCGG 59.812 47.826 0.00 0.00 0.00 4.18
304 305 3.364964 GCCTTGTTGGTTAGTTGTCATCG 60.365 47.826 0.00 0.00 38.35 3.84
305 306 3.821033 AGCCTTGTTGGTTAGTTGTCATC 59.179 43.478 0.00 0.00 38.35 2.92
306 307 3.832527 AGCCTTGTTGGTTAGTTGTCAT 58.167 40.909 0.00 0.00 38.35 3.06
307 308 3.290948 AGCCTTGTTGGTTAGTTGTCA 57.709 42.857 0.00 0.00 38.35 3.58
308 309 3.303791 CGAAGCCTTGTTGGTTAGTTGTC 60.304 47.826 0.00 0.00 38.35 3.18
309 310 2.616842 CGAAGCCTTGTTGGTTAGTTGT 59.383 45.455 0.00 0.00 38.35 3.32
310 311 3.268013 CGAAGCCTTGTTGGTTAGTTG 57.732 47.619 0.00 0.00 38.35 3.16
326 327 1.571919 CCTAATTCTGGACGGCGAAG 58.428 55.000 16.62 8.36 0.00 3.79
327 328 0.461339 GCCTAATTCTGGACGGCGAA 60.461 55.000 16.62 0.00 0.00 4.70
328 329 1.143183 GCCTAATTCTGGACGGCGA 59.857 57.895 16.62 0.00 0.00 5.54
329 330 1.887707 GGCCTAATTCTGGACGGCG 60.888 63.158 4.80 4.80 41.58 6.46
330 331 1.526225 GGGCCTAATTCTGGACGGC 60.526 63.158 0.84 0.00 39.98 5.68
331 332 1.070289 GTAGGGCCTAATTCTGGACGG 59.930 57.143 16.44 0.00 32.08 4.79
332 333 1.760613 TGTAGGGCCTAATTCTGGACG 59.239 52.381 16.44 0.00 32.08 4.79
333 334 3.039011 TCTGTAGGGCCTAATTCTGGAC 58.961 50.000 16.44 3.02 0.00 4.02
334 335 3.414759 TCTGTAGGGCCTAATTCTGGA 57.585 47.619 16.44 4.74 0.00 3.86
335 336 4.503714 TTTCTGTAGGGCCTAATTCTGG 57.496 45.455 16.44 2.41 0.00 3.86
336 337 5.501156 AGTTTTCTGTAGGGCCTAATTCTG 58.499 41.667 16.44 7.48 0.00 3.02
337 338 5.780958 AGTTTTCTGTAGGGCCTAATTCT 57.219 39.130 16.44 4.55 0.00 2.40
338 339 6.762187 GTCTAGTTTTCTGTAGGGCCTAATTC 59.238 42.308 16.44 3.53 0.00 2.17
341 342 5.088730 TGTCTAGTTTTCTGTAGGGCCTAA 58.911 41.667 16.44 0.00 0.00 2.69
373 374 7.288672 CCTCTTCACAAAATAGTTTCGTACAC 58.711 38.462 0.00 0.00 0.00 2.90
387 388 5.491982 GCTTTCTATCTCCCTCTTCACAAA 58.508 41.667 0.00 0.00 0.00 2.83
425 426 1.300697 GAGACCGCTTCAACCGTGT 60.301 57.895 0.00 0.00 0.00 4.49
428 429 2.004583 TAATGAGACCGCTTCAACCG 57.995 50.000 0.00 0.00 0.00 4.44
442 443 6.099557 TCCACCATGTACATGTCTGATAATGA 59.900 38.462 29.25 15.04 37.11 2.57
450 451 2.551270 ACCTCCACCATGTACATGTCT 58.449 47.619 29.25 14.63 37.11 3.41
453 454 2.026356 TCCAACCTCCACCATGTACATG 60.026 50.000 26.02 26.02 38.51 3.21
471 472 1.896660 GAGGTTTTGCGGCTGTCCA 60.897 57.895 0.00 0.00 0.00 4.02
489 490 0.684153 AACCGGCATCAAATCTGGGG 60.684 55.000 0.00 0.00 33.03 4.96
492 493 4.155826 TCTTACAAACCGGCATCAAATCTG 59.844 41.667 0.00 0.00 0.00 2.90
511 512 3.444916 GATTCACGCATCCGAACTCTTA 58.555 45.455 0.00 0.00 38.29 2.10
531 532 7.655732 CGTCCCGCATATATATTTATGAATGGA 59.344 37.037 15.05 12.90 32.36 3.41
532 533 7.655732 TCGTCCCGCATATATATTTATGAATGG 59.344 37.037 15.05 12.24 32.36 3.16
533 534 8.587952 TCGTCCCGCATATATATTTATGAATG 57.412 34.615 15.05 5.77 32.36 2.67
534 535 9.208022 CATCGTCCCGCATATATATTTATGAAT 57.792 33.333 15.05 0.00 32.36 2.57
535 536 8.201464 ACATCGTCCCGCATATATATTTATGAA 58.799 33.333 15.05 0.00 32.36 2.57
536 537 7.722363 ACATCGTCCCGCATATATATTTATGA 58.278 34.615 15.05 0.00 32.36 2.15
537 538 7.946655 ACATCGTCCCGCATATATATTTATG 57.053 36.000 8.38 8.38 33.54 1.90
538 539 7.441157 CCAACATCGTCCCGCATATATATTTAT 59.559 37.037 0.00 0.00 0.00 1.40
539 540 6.759356 CCAACATCGTCCCGCATATATATTTA 59.241 38.462 0.00 0.00 0.00 1.40
540 541 5.584649 CCAACATCGTCCCGCATATATATTT 59.415 40.000 0.00 0.00 0.00 1.40
541 542 5.105106 TCCAACATCGTCCCGCATATATATT 60.105 40.000 0.00 0.00 0.00 1.28
542 543 4.404394 TCCAACATCGTCCCGCATATATAT 59.596 41.667 0.00 0.00 0.00 0.86
543 544 3.764972 TCCAACATCGTCCCGCATATATA 59.235 43.478 0.00 0.00 0.00 0.86
544 545 2.565391 TCCAACATCGTCCCGCATATAT 59.435 45.455 0.00 0.00 0.00 0.86
545 546 1.964933 TCCAACATCGTCCCGCATATA 59.035 47.619 0.00 0.00 0.00 0.86
546 547 0.756294 TCCAACATCGTCCCGCATAT 59.244 50.000 0.00 0.00 0.00 1.78
547 548 0.756294 ATCCAACATCGTCCCGCATA 59.244 50.000 0.00 0.00 0.00 3.14
548 549 0.815213 CATCCAACATCGTCCCGCAT 60.815 55.000 0.00 0.00 0.00 4.73
549 550 1.449423 CATCCAACATCGTCCCGCA 60.449 57.895 0.00 0.00 0.00 5.69
550 551 2.180204 CCATCCAACATCGTCCCGC 61.180 63.158 0.00 0.00 0.00 6.13
675 3171 2.860628 CGAATGAGCGGCGCTGTAC 61.861 63.158 41.51 25.37 39.88 2.90
690 3186 4.351938 CCACGCGTCCAGTCCGAA 62.352 66.667 9.86 0.00 0.00 4.30
795 3509 2.127758 GAAACCGAAGCGTGCACG 60.128 61.111 34.01 34.01 43.27 5.34
1174 3921 5.345702 TGATTCGTTGGTACTAGTATGTGC 58.654 41.667 5.75 0.00 0.00 4.57
1216 3965 1.227664 CGGAGAGGGCTCTAGTCCA 59.772 63.158 13.72 0.00 43.78 4.02
1268 4285 1.248785 ACGAGAACTTGAGCGGCCTA 61.249 55.000 0.00 0.00 0.00 3.93
1374 4391 4.796231 CTCCGTCGCCCCGTCAAG 62.796 72.222 0.00 0.00 0.00 3.02
3465 9072 9.157104 CCAGGTTAAAGTAACAACACAATTTTT 57.843 29.630 0.96 0.00 40.39 1.94
4038 9933 1.878656 GACAGGACAGGACAGGACGG 61.879 65.000 0.00 0.00 0.00 4.79
4039 9934 1.587054 GACAGGACAGGACAGGACG 59.413 63.158 0.00 0.00 0.00 4.79
4040 9935 0.543174 AGGACAGGACAGGACAGGAC 60.543 60.000 0.00 0.00 0.00 3.85
4041 9936 1.006043 CTAGGACAGGACAGGACAGGA 59.994 57.143 0.00 0.00 0.00 3.86
4042 9937 1.006043 TCTAGGACAGGACAGGACAGG 59.994 57.143 0.00 0.00 0.00 4.00
4043 9938 2.516227 TCTAGGACAGGACAGGACAG 57.484 55.000 0.00 0.00 0.00 3.51
4044 9939 3.099905 CAATCTAGGACAGGACAGGACA 58.900 50.000 0.00 0.00 0.00 4.02
4045 9940 3.366396 TCAATCTAGGACAGGACAGGAC 58.634 50.000 0.00 0.00 0.00 3.85
4046 9941 3.011821 ACTCAATCTAGGACAGGACAGGA 59.988 47.826 0.00 0.00 0.00 3.86
4367 12055 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
4371 12068 1.229131 TAGTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
4372 12069 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
4375 12072 5.703130 ACGTATAATTAGTACTCCCTCCGTC 59.297 44.000 0.00 0.00 0.00 4.79
4378 12075 7.766278 TCGATACGTATAATTAGTACTCCCTCC 59.234 40.741 8.34 0.00 0.00 4.30
4460 12175 7.246171 TGTCTAGAAAGAGCAGGATAAAGTT 57.754 36.000 0.00 0.00 30.45 2.66
4461 12176 6.859112 TGTCTAGAAAGAGCAGGATAAAGT 57.141 37.500 0.00 0.00 30.45 2.66
4469 12184 5.083533 AGAACCATGTCTAGAAAGAGCAG 57.916 43.478 0.00 0.00 30.45 4.24
4473 12188 5.254115 TCGAGAGAACCATGTCTAGAAAGA 58.746 41.667 0.00 0.00 37.03 2.52
4474 12189 5.124776 ACTCGAGAGAACCATGTCTAGAAAG 59.875 44.000 21.68 0.00 41.32 2.62
4478 12298 4.196193 AGACTCGAGAGAACCATGTCTAG 58.804 47.826 21.68 0.00 38.41 2.43
4506 12326 1.345415 CCAAGTGAAGCAAATGCCCTT 59.655 47.619 0.94 0.00 43.38 3.95
4523 12347 3.594775 CGTGCAGCCAACAGCCAA 61.595 61.111 0.00 0.00 45.47 4.52
4524 12348 4.560743 TCGTGCAGCCAACAGCCA 62.561 61.111 0.00 0.00 45.47 4.75
4525 12349 4.030452 GTCGTGCAGCCAACAGCC 62.030 66.667 0.00 0.00 45.47 4.85
4526 12350 3.245948 CTGTCGTGCAGCCAACAGC 62.246 63.158 6.11 0.00 38.52 4.40
4527 12351 2.941333 CTGTCGTGCAGCCAACAG 59.059 61.111 4.95 4.95 38.52 3.16
4546 12372 3.846588 ACAAGTATGGTCAGATGGGAACT 59.153 43.478 0.00 0.00 0.00 3.01
4570 12411 3.890756 TGTGATCAACAACCTGCAGATTT 59.109 39.130 17.39 4.86 35.24 2.17
4582 12423 0.179059 AGTGCGTGGTGTGATCAACA 60.179 50.000 0.00 0.00 39.13 3.33
4661 12506 0.682292 TTGTGCATAGGTCGTGGTCA 59.318 50.000 0.00 0.00 0.00 4.02
4662 12507 1.803334 TTTGTGCATAGGTCGTGGTC 58.197 50.000 0.00 0.00 0.00 4.02
4663 12508 2.151202 CTTTTGTGCATAGGTCGTGGT 58.849 47.619 0.00 0.00 0.00 4.16
4665 12510 1.806542 AGCTTTTGTGCATAGGTCGTG 59.193 47.619 0.00 0.00 34.99 4.35
4666 12511 2.076863 GAGCTTTTGTGCATAGGTCGT 58.923 47.619 0.00 0.00 34.99 4.34
4667 12512 2.076100 TGAGCTTTTGTGCATAGGTCG 58.924 47.619 12.44 0.00 38.81 4.79
4669 12514 1.815003 GCTGAGCTTTTGTGCATAGGT 59.185 47.619 0.00 0.00 34.99 3.08
4670 12515 1.202110 CGCTGAGCTTTTGTGCATAGG 60.202 52.381 1.78 0.00 34.99 2.57
4672 12517 0.168788 GCGCTGAGCTTTTGTGCATA 59.831 50.000 1.78 0.00 44.04 3.14
4673 12518 1.080974 GCGCTGAGCTTTTGTGCAT 60.081 52.632 1.78 0.00 44.04 3.96
4674 12519 2.332514 GCGCTGAGCTTTTGTGCA 59.667 55.556 1.78 0.00 44.04 4.57
4718 12563 0.691078 TCATACAGAGGGACAGGGCC 60.691 60.000 0.00 0.00 0.00 5.80
4727 12572 1.136891 TGGACGTGCATCATACAGAGG 59.863 52.381 5.33 0.00 0.00 3.69
4734 12583 2.988010 ACATACTGGACGTGCATCAT 57.012 45.000 11.16 3.85 0.00 2.45
4740 12589 7.883229 TTATTGCATATACATACTGGACGTG 57.117 36.000 0.00 0.00 0.00 4.49
4783 12660 1.171308 AAGGAGCAGCGTACGAAGTA 58.829 50.000 21.65 0.00 45.11 2.24
4785 12662 1.429463 AAAAGGAGCAGCGTACGAAG 58.571 50.000 21.65 11.32 0.00 3.79
4787 12664 1.144969 CAAAAAGGAGCAGCGTACGA 58.855 50.000 21.65 0.00 0.00 3.43
4788 12665 0.165944 CCAAAAAGGAGCAGCGTACG 59.834 55.000 11.84 11.84 41.22 3.67
4789 12666 0.109735 GCCAAAAAGGAGCAGCGTAC 60.110 55.000 0.00 0.00 41.22 3.67
4791 12668 1.518903 GAGCCAAAAAGGAGCAGCGT 61.519 55.000 0.00 0.00 41.22 5.07
4792 12669 1.211190 GAGCCAAAAAGGAGCAGCG 59.789 57.895 0.00 0.00 41.22 5.18
4793 12670 0.897401 AGGAGCCAAAAAGGAGCAGC 60.897 55.000 0.00 0.00 41.22 5.25
4794 12671 1.271656 CAAGGAGCCAAAAAGGAGCAG 59.728 52.381 0.00 0.00 41.22 4.24
4812 12707 4.201832 ACAACGACACAAATAAACGCTCAA 60.202 37.500 0.00 0.00 0.00 3.02
4815 12710 3.955771 ACAACGACACAAATAAACGCT 57.044 38.095 0.00 0.00 0.00 5.07
4848 12747 6.998673 GGCCTGGTACTAAGAATTTATGATGT 59.001 38.462 0.00 0.00 0.00 3.06
4857 12756 2.092375 GGCTTGGCCTGGTACTAAGAAT 60.092 50.000 3.32 0.00 46.69 2.40
4858 12757 1.280998 GGCTTGGCCTGGTACTAAGAA 59.719 52.381 3.32 0.00 46.69 2.52
4859 12758 0.909623 GGCTTGGCCTGGTACTAAGA 59.090 55.000 3.32 0.00 46.69 2.10
4860 12759 3.478540 GGCTTGGCCTGGTACTAAG 57.521 57.895 3.32 0.00 46.69 2.18
5069 12978 2.186903 CGGGCACGCCAACTATCT 59.813 61.111 10.83 0.00 37.98 1.98
5150 13061 2.798283 GCCGTGCGCTTATATAAAGTCA 59.202 45.455 9.73 0.00 0.00 3.41
5220 13132 2.283966 ACGGACAGGGAGGGAGTG 60.284 66.667 0.00 0.00 0.00 3.51
5224 13136 3.775654 GCAGACGGACAGGGAGGG 61.776 72.222 0.00 0.00 0.00 4.30
5225 13137 2.681778 AGCAGACGGACAGGGAGG 60.682 66.667 0.00 0.00 0.00 4.30
5299 13213 1.028905 GAGGGATCGTGAGGAGAGTG 58.971 60.000 0.00 0.00 0.00 3.51
5300 13214 0.106419 GGAGGGATCGTGAGGAGAGT 60.106 60.000 0.00 0.00 0.00 3.24
5301 13215 0.825840 GGGAGGGATCGTGAGGAGAG 60.826 65.000 0.00 0.00 0.00 3.20
5302 13216 1.230497 GGGAGGGATCGTGAGGAGA 59.770 63.158 0.00 0.00 0.00 3.71
5303 13217 1.834822 GGGGAGGGATCGTGAGGAG 60.835 68.421 0.00 0.00 0.00 3.69
5304 13218 2.282446 GGGGAGGGATCGTGAGGA 59.718 66.667 0.00 0.00 0.00 3.71
5305 13219 2.844839 GGGGGAGGGATCGTGAGG 60.845 72.222 0.00 0.00 0.00 3.86
5306 13220 2.041922 TGGGGGAGGGATCGTGAG 60.042 66.667 0.00 0.00 0.00 3.51
5307 13221 2.365105 GTGGGGGAGGGATCGTGA 60.365 66.667 0.00 0.00 0.00 4.35
5381 13295 2.831366 ATGGACGACGACGATCGGG 61.831 63.158 20.98 13.29 45.59 5.14
5388 13302 1.153823 CCTCACCATGGACGACGAC 60.154 63.158 21.47 0.00 0.00 4.34
5415 13341 2.222886 GAGGAGTAGCAGCTGTCGATA 58.777 52.381 16.64 0.82 0.00 2.92
5479 13405 0.693049 AGTGGAGGTGTGGATGGAAC 59.307 55.000 0.00 0.00 0.00 3.62
5484 13410 2.982488 AGAAGAAAGTGGAGGTGTGGAT 59.018 45.455 0.00 0.00 0.00 3.41
5490 13416 1.700186 GGTGGAGAAGAAAGTGGAGGT 59.300 52.381 0.00 0.00 0.00 3.85
5497 13423 0.737715 CTCGCCGGTGGAGAAGAAAG 60.738 60.000 16.49 0.00 29.80 2.62
5498 13424 1.183030 TCTCGCCGGTGGAGAAGAAA 61.183 55.000 20.57 2.77 37.59 2.52
5499 13425 1.605451 TCTCGCCGGTGGAGAAGAA 60.605 57.895 20.57 3.08 37.59 2.52
5500 13426 2.035155 TCTCGCCGGTGGAGAAGA 59.965 61.111 20.57 11.61 37.59 2.87
5542 13468 5.864474 TCAGAAAAGAAGTCGAGCTATGAAC 59.136 40.000 0.00 0.00 0.00 3.18
5558 13484 4.174009 CCATCAGCAGCAAATCAGAAAAG 58.826 43.478 0.00 0.00 0.00 2.27
5559 13485 3.615592 GCCATCAGCAGCAAATCAGAAAA 60.616 43.478 0.00 0.00 42.97 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.