Multiple sequence alignment - TraesCS3D01G342300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G342300 chr3D 100.000 2213 0 0 1 2213 455016134 455013922 0.000000e+00 4087.0
1 TraesCS3D01G342300 chr3D 93.095 1289 57 6 370 1629 549726283 549724998 0.000000e+00 1858.0
2 TraesCS3D01G342300 chr3D 91.810 232 7 5 1 232 549726813 549726594 1.650000e-81 313.0
3 TraesCS3D01G342300 chr3D 86.022 186 23 3 41 224 206164105 206164289 1.730000e-46 196.0
4 TraesCS3D01G342300 chr2D 98.283 1631 24 4 1 1629 356535364 356533736 0.000000e+00 2854.0
5 TraesCS3D01G342300 chr2D 85.231 1449 159 35 225 1633 344567915 344569348 0.000000e+00 1439.0
6 TraesCS3D01G342300 chr4D 93.839 1331 44 4 328 1629 443715475 443714154 0.000000e+00 1969.0
7 TraesCS3D01G342300 chr4D 86.848 1437 147 13 228 1629 451883230 451881801 0.000000e+00 1568.0
8 TraesCS3D01G342300 chr4D 72.381 210 52 5 1959 2165 230496232 230496438 6.600000e-06 62.1
9 TraesCS3D01G342300 chr2B 86.130 1442 156 14 225 1629 638286906 638288340 0.000000e+00 1515.0
10 TraesCS3D01G342300 chr2B 88.947 380 41 1 234 612 39117779 39118158 3.330000e-128 468.0
11 TraesCS3D01G342300 chr6A 86.042 1440 158 14 225 1629 74542436 74543867 0.000000e+00 1506.0
12 TraesCS3D01G342300 chr6A 86.239 1279 138 10 387 1633 602833708 602834980 0.000000e+00 1352.0
13 TraesCS3D01G342300 chr6A 80.208 96 18 1 1919 2014 605994655 605994561 1.100000e-08 71.3
14 TraesCS3D01G342300 chr5B 85.774 1441 162 22 225 1629 547905114 547906547 0.000000e+00 1485.0
15 TraesCS3D01G342300 chr3B 85.566 1441 166 26 225 1629 629799509 629800943 0.000000e+00 1471.0
16 TraesCS3D01G342300 chr3B 93.478 230 8 4 3 232 75351481 75351703 3.520000e-88 335.0
17 TraesCS3D01G342300 chr3B 76.777 422 85 5 1631 2050 410609778 410609368 7.950000e-55 224.0
18 TraesCS3D01G342300 chr1B 90.546 952 79 9 667 1612 84371005 84371951 0.000000e+00 1249.0
19 TraesCS3D01G342300 chr1B 91.568 676 27 3 228 873 646077971 646078646 0.000000e+00 905.0
20 TraesCS3D01G342300 chr1B 90.955 398 29 6 228 621 84370276 84370670 1.500000e-146 529.0
21 TraesCS3D01G342300 chr1B 93.534 232 13 2 1 230 646077691 646077922 5.850000e-91 344.0
22 TraesCS3D01G342300 chr1B 88.889 171 15 4 63 230 109348878 109348709 8.010000e-50 207.0
23 TraesCS3D01G342300 chr1B 96.203 79 3 0 1 79 84370036 84370114 1.780000e-26 130.0
24 TraesCS3D01G342300 chr4A 97.403 231 2 2 3 232 573684333 573684106 7.410000e-105 390.0
25 TraesCS3D01G342300 chr4B 93.103 232 10 4 1 232 420221747 420221522 3.520000e-88 335.0
26 TraesCS3D01G342300 chr3A 77.996 459 99 2 1631 2088 100047353 100047810 1.000000e-73 287.0
27 TraesCS3D01G342300 chr7A 77.725 422 90 4 1631 2050 75028008 75028427 2.820000e-64 255.0
28 TraesCS3D01G342300 chrUn 88.304 171 16 4 63 230 49945099 49945268 3.730000e-48 202.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G342300 chr3D 455013922 455016134 2212 True 4087.0 4087 100.0000 1 2213 1 chr3D.!!$R1 2212
1 TraesCS3D01G342300 chr3D 549724998 549726813 1815 True 1085.5 1858 92.4525 1 1629 2 chr3D.!!$R2 1628
2 TraesCS3D01G342300 chr2D 356533736 356535364 1628 True 2854.0 2854 98.2830 1 1629 1 chr2D.!!$R1 1628
3 TraesCS3D01G342300 chr2D 344567915 344569348 1433 False 1439.0 1439 85.2310 225 1633 1 chr2D.!!$F1 1408
4 TraesCS3D01G342300 chr4D 443714154 443715475 1321 True 1969.0 1969 93.8390 328 1629 1 chr4D.!!$R1 1301
5 TraesCS3D01G342300 chr4D 451881801 451883230 1429 True 1568.0 1568 86.8480 228 1629 1 chr4D.!!$R2 1401
6 TraesCS3D01G342300 chr2B 638286906 638288340 1434 False 1515.0 1515 86.1300 225 1629 1 chr2B.!!$F2 1404
7 TraesCS3D01G342300 chr6A 74542436 74543867 1431 False 1506.0 1506 86.0420 225 1629 1 chr6A.!!$F1 1404
8 TraesCS3D01G342300 chr6A 602833708 602834980 1272 False 1352.0 1352 86.2390 387 1633 1 chr6A.!!$F2 1246
9 TraesCS3D01G342300 chr5B 547905114 547906547 1433 False 1485.0 1485 85.7740 225 1629 1 chr5B.!!$F1 1404
10 TraesCS3D01G342300 chr3B 629799509 629800943 1434 False 1471.0 1471 85.5660 225 1629 1 chr3B.!!$F2 1404
11 TraesCS3D01G342300 chr1B 84370036 84371951 1915 False 636.0 1249 92.5680 1 1612 3 chr1B.!!$F1 1611
12 TraesCS3D01G342300 chr1B 646077691 646078646 955 False 624.5 905 92.5510 1 873 2 chr1B.!!$F2 872

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1331 1861 5.192927 CCTAAGACCATCCTGTGCATTTAA 58.807 41.667 0.0 0.0 0.0 1.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2166 2698 0.684153 ATGATTCAGGGGTTTGGCGG 60.684 55.0 0.0 0.0 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1331 1861 5.192927 CCTAAGACCATCCTGTGCATTTAA 58.807 41.667 0.00 0.00 0.00 1.52
1363 1893 1.945387 TGCTGCTTAGACTGCTATGC 58.055 50.000 0.00 0.00 44.02 3.14
1593 2125 7.224167 ACGCTCTTACAATAATTAGCTTACACC 59.776 37.037 0.00 0.00 0.00 4.16
1629 2161 2.526120 GCGCAACGGGTCATCTAGC 61.526 63.158 0.30 0.00 0.00 3.42
1630 2162 1.141881 CGCAACGGGTCATCTAGCT 59.858 57.895 0.00 0.00 0.00 3.32
1631 2163 1.148157 CGCAACGGGTCATCTAGCTG 61.148 60.000 0.00 0.00 37.99 4.24
1633 2165 1.136305 GCAACGGGTCATCTAGCTGTA 59.864 52.381 0.00 0.00 44.47 2.74
1634 2166 2.224066 GCAACGGGTCATCTAGCTGTAT 60.224 50.000 0.00 0.00 44.47 2.29
1635 2167 3.384668 CAACGGGTCATCTAGCTGTATG 58.615 50.000 0.00 0.00 44.47 2.39
1636 2168 1.964223 ACGGGTCATCTAGCTGTATGG 59.036 52.381 0.00 0.00 43.41 2.74
1637 2169 2.239400 CGGGTCATCTAGCTGTATGGA 58.761 52.381 0.00 0.00 0.00 3.41
1638 2170 2.628178 CGGGTCATCTAGCTGTATGGAA 59.372 50.000 0.00 0.00 0.00 3.53
1639 2171 3.069586 CGGGTCATCTAGCTGTATGGAAA 59.930 47.826 0.00 0.00 0.00 3.13
1640 2172 4.381411 GGGTCATCTAGCTGTATGGAAAC 58.619 47.826 0.00 0.00 0.00 2.78
1658 2190 7.789273 TGGAAACACTCGTAAGACAATAAAA 57.211 32.000 0.00 0.00 36.94 1.52
1659 2191 7.632721 TGGAAACACTCGTAAGACAATAAAAC 58.367 34.615 0.00 0.00 36.94 2.43
1660 2192 7.280428 TGGAAACACTCGTAAGACAATAAAACA 59.720 33.333 0.00 0.00 36.94 2.83
1661 2193 8.287503 GGAAACACTCGTAAGACAATAAAACAT 58.712 33.333 0.00 0.00 45.01 2.71
1662 2194 9.659830 GAAACACTCGTAAGACAATAAAACATT 57.340 29.630 0.00 0.00 45.01 2.71
1663 2195 9.445786 AAACACTCGTAAGACAATAAAACATTG 57.554 29.630 0.00 0.00 45.01 2.82
1664 2196 8.149973 ACACTCGTAAGACAATAAAACATTGT 57.850 30.769 2.40 2.40 45.01 2.71
1676 2208 9.691362 ACAATAAAACATTGTCTGTAATCAACC 57.309 29.630 0.00 0.00 37.69 3.77
1677 2209 9.912634 CAATAAAACATTGTCTGTAATCAACCT 57.087 29.630 0.00 0.00 36.98 3.50
1680 2212 8.871686 AAAACATTGTCTGTAATCAACCTTTC 57.128 30.769 0.00 0.00 36.98 2.62
1681 2213 6.241207 ACATTGTCTGTAATCAACCTTTCG 57.759 37.500 0.00 0.00 35.91 3.46
1682 2214 5.181245 ACATTGTCTGTAATCAACCTTTCGG 59.819 40.000 0.00 0.00 35.91 4.30
1683 2215 3.670625 TGTCTGTAATCAACCTTTCGGG 58.329 45.455 0.00 0.00 41.89 5.14
1684 2216 3.325425 TGTCTGTAATCAACCTTTCGGGA 59.675 43.478 0.00 0.00 38.76 5.14
1685 2217 4.202377 TGTCTGTAATCAACCTTTCGGGAA 60.202 41.667 0.00 0.00 38.76 3.97
1686 2218 4.153655 GTCTGTAATCAACCTTTCGGGAAC 59.846 45.833 0.00 0.00 38.76 3.62
1702 2234 4.930463 GGGAACGAAAGAATTCTGAGTC 57.070 45.455 9.17 6.38 33.17 3.36
1703 2235 4.315803 GGGAACGAAAGAATTCTGAGTCA 58.684 43.478 9.17 0.00 33.17 3.41
1704 2236 4.390297 GGGAACGAAAGAATTCTGAGTCAG 59.610 45.833 14.36 14.36 33.17 3.51
1705 2237 5.230942 GGAACGAAAGAATTCTGAGTCAGA 58.769 41.667 19.10 19.10 38.87 3.27
1706 2238 5.119434 GGAACGAAAGAATTCTGAGTCAGAC 59.881 44.000 22.57 11.42 40.46 3.51
1707 2239 5.461032 ACGAAAGAATTCTGAGTCAGACT 57.539 39.130 22.57 14.71 40.46 3.24
1708 2240 6.576662 ACGAAAGAATTCTGAGTCAGACTA 57.423 37.500 22.57 9.68 40.46 2.59
1709 2241 6.982852 ACGAAAGAATTCTGAGTCAGACTAA 58.017 36.000 22.57 8.91 40.46 2.24
1710 2242 7.087639 ACGAAAGAATTCTGAGTCAGACTAAG 58.912 38.462 22.57 8.59 40.46 2.18
1711 2243 7.040340 ACGAAAGAATTCTGAGTCAGACTAAGA 60.040 37.037 22.57 13.24 40.46 2.10
1712 2244 7.810282 CGAAAGAATTCTGAGTCAGACTAAGAA 59.190 37.037 26.74 26.74 46.72 2.52
1718 2250 7.397892 TTCTGAGTCAGACTAAGAATACCAG 57.602 40.000 22.49 13.80 40.04 4.00
1719 2251 5.888724 TCTGAGTCAGACTAAGAATACCAGG 59.111 44.000 19.10 0.00 32.79 4.45
1720 2252 5.580998 TGAGTCAGACTAAGAATACCAGGT 58.419 41.667 2.00 0.00 0.00 4.00
1721 2253 6.728411 TGAGTCAGACTAAGAATACCAGGTA 58.272 40.000 2.00 0.39 0.00 3.08
1722 2254 6.829298 TGAGTCAGACTAAGAATACCAGGTAG 59.171 42.308 2.00 0.00 0.00 3.18
1723 2255 6.971340 AGTCAGACTAAGAATACCAGGTAGA 58.029 40.000 0.00 0.00 0.00 2.59
1724 2256 7.411808 AGTCAGACTAAGAATACCAGGTAGAA 58.588 38.462 0.00 0.00 0.00 2.10
1725 2257 7.894364 AGTCAGACTAAGAATACCAGGTAGAAA 59.106 37.037 0.00 0.00 0.00 2.52
1726 2258 8.529476 GTCAGACTAAGAATACCAGGTAGAAAA 58.471 37.037 5.31 0.00 0.00 2.29
1727 2259 8.750298 TCAGACTAAGAATACCAGGTAGAAAAG 58.250 37.037 5.31 1.91 0.00 2.27
1728 2260 7.492994 CAGACTAAGAATACCAGGTAGAAAAGC 59.507 40.741 5.31 0.00 0.00 3.51
1729 2261 6.651086 ACTAAGAATACCAGGTAGAAAAGCC 58.349 40.000 5.31 0.00 0.00 4.35
1730 2262 5.780958 AAGAATACCAGGTAGAAAAGCCT 57.219 39.130 5.31 0.00 35.04 4.58
1731 2263 5.780958 AGAATACCAGGTAGAAAAGCCTT 57.219 39.130 5.31 0.00 31.73 4.35
1732 2264 5.746284 AGAATACCAGGTAGAAAAGCCTTC 58.254 41.667 5.31 1.65 31.73 3.46
1733 2265 5.250774 AGAATACCAGGTAGAAAAGCCTTCA 59.749 40.000 5.31 0.00 31.73 3.02
1734 2266 3.876309 ACCAGGTAGAAAAGCCTTCAA 57.124 42.857 0.00 0.00 31.73 2.69
1735 2267 4.178956 ACCAGGTAGAAAAGCCTTCAAA 57.821 40.909 0.00 0.00 31.73 2.69
1736 2268 3.889538 ACCAGGTAGAAAAGCCTTCAAAC 59.110 43.478 0.00 0.00 31.73 2.93
1737 2269 3.058224 CCAGGTAGAAAAGCCTTCAAACG 60.058 47.826 0.00 0.00 31.73 3.60
1738 2270 3.813166 CAGGTAGAAAAGCCTTCAAACGA 59.187 43.478 0.00 0.00 31.73 3.85
1739 2271 4.065789 AGGTAGAAAAGCCTTCAAACGAG 58.934 43.478 0.00 0.00 0.00 4.18
1740 2272 4.062991 GGTAGAAAAGCCTTCAAACGAGA 58.937 43.478 0.00 0.00 0.00 4.04
1741 2273 4.695928 GGTAGAAAAGCCTTCAAACGAGAT 59.304 41.667 0.00 0.00 0.00 2.75
1742 2274 4.756084 AGAAAAGCCTTCAAACGAGATG 57.244 40.909 0.00 0.00 0.00 2.90
1743 2275 4.389374 AGAAAAGCCTTCAAACGAGATGA 58.611 39.130 0.00 0.00 0.00 2.92
1744 2276 4.214332 AGAAAAGCCTTCAAACGAGATGAC 59.786 41.667 0.00 0.00 0.00 3.06
1745 2277 3.409026 AAGCCTTCAAACGAGATGACT 57.591 42.857 0.00 0.00 0.00 3.41
1746 2278 2.966050 AGCCTTCAAACGAGATGACTC 58.034 47.619 0.00 0.00 39.54 3.36
1747 2279 2.003301 GCCTTCAAACGAGATGACTCC 58.997 52.381 0.00 0.00 39.76 3.85
1748 2280 2.354203 GCCTTCAAACGAGATGACTCCT 60.354 50.000 0.00 0.00 39.76 3.69
1749 2281 3.866449 GCCTTCAAACGAGATGACTCCTT 60.866 47.826 0.00 0.00 39.76 3.36
1750 2282 4.319177 CCTTCAAACGAGATGACTCCTTT 58.681 43.478 0.00 0.00 39.76 3.11
1751 2283 4.757149 CCTTCAAACGAGATGACTCCTTTT 59.243 41.667 0.00 0.00 39.76 2.27
1752 2284 5.239525 CCTTCAAACGAGATGACTCCTTTTT 59.760 40.000 0.00 0.00 39.76 1.94
1791 2323 4.685169 ACCACATTACAAAAGCTGATCG 57.315 40.909 0.00 0.00 0.00 3.69
1792 2324 3.119849 ACCACATTACAAAAGCTGATCGC 60.120 43.478 0.00 1.92 39.57 4.58
1793 2325 3.429085 CACATTACAAAAGCTGATCGCC 58.571 45.455 6.02 0.00 40.39 5.54
1794 2326 2.423538 ACATTACAAAAGCTGATCGCCC 59.576 45.455 6.02 0.00 40.39 6.13
1795 2327 2.489938 TTACAAAAGCTGATCGCCCT 57.510 45.000 6.02 0.00 40.39 5.19
1796 2328 3.620427 TTACAAAAGCTGATCGCCCTA 57.380 42.857 6.02 0.00 40.39 3.53
1797 2329 2.489938 ACAAAAGCTGATCGCCCTAA 57.510 45.000 6.02 0.00 40.39 2.69
1798 2330 2.790433 ACAAAAGCTGATCGCCCTAAA 58.210 42.857 6.02 0.00 40.39 1.85
1799 2331 3.356290 ACAAAAGCTGATCGCCCTAAAT 58.644 40.909 6.02 0.00 40.39 1.40
1800 2332 3.763897 ACAAAAGCTGATCGCCCTAAATT 59.236 39.130 6.02 0.00 40.39 1.82
1801 2333 4.107622 CAAAAGCTGATCGCCCTAAATTG 58.892 43.478 6.02 1.32 40.39 2.32
1802 2334 1.312815 AGCTGATCGCCCTAAATTGC 58.687 50.000 6.02 0.00 40.39 3.56
1808 2340 3.909957 CGCCCTAAATTGCGTTACC 57.090 52.632 0.08 0.00 45.43 2.85
1809 2341 1.375551 CGCCCTAAATTGCGTTACCT 58.624 50.000 0.08 0.00 45.43 3.08
1810 2342 1.741145 CGCCCTAAATTGCGTTACCTT 59.259 47.619 0.08 0.00 45.43 3.50
1811 2343 2.162809 CGCCCTAAATTGCGTTACCTTT 59.837 45.455 0.08 0.00 45.43 3.11
1812 2344 3.366577 CGCCCTAAATTGCGTTACCTTTT 60.367 43.478 0.08 0.00 45.43 2.27
1813 2345 4.171005 GCCCTAAATTGCGTTACCTTTTC 58.829 43.478 0.00 0.00 0.00 2.29
1814 2346 4.740268 CCCTAAATTGCGTTACCTTTTCC 58.260 43.478 0.00 0.00 0.00 3.13
1815 2347 4.408694 CCTAAATTGCGTTACCTTTTCCG 58.591 43.478 0.00 0.00 0.00 4.30
1816 2348 4.154556 CCTAAATTGCGTTACCTTTTCCGA 59.845 41.667 0.00 0.00 0.00 4.55
1817 2349 3.824414 AATTGCGTTACCTTTTCCGAG 57.176 42.857 0.00 0.00 0.00 4.63
1818 2350 1.515081 TTGCGTTACCTTTTCCGAGG 58.485 50.000 0.00 0.00 42.75 4.63
1819 2351 0.680618 TGCGTTACCTTTTCCGAGGA 59.319 50.000 0.00 0.00 39.25 3.71
1820 2352 1.070445 TGCGTTACCTTTTCCGAGGAA 59.930 47.619 0.00 0.00 39.25 3.36
1821 2353 2.289819 TGCGTTACCTTTTCCGAGGAAT 60.290 45.455 5.29 0.00 39.25 3.01
1822 2354 2.745821 GCGTTACCTTTTCCGAGGAATT 59.254 45.455 5.29 0.00 39.25 2.17
1823 2355 3.934579 GCGTTACCTTTTCCGAGGAATTA 59.065 43.478 5.29 0.00 39.25 1.40
1824 2356 4.392754 GCGTTACCTTTTCCGAGGAATTAA 59.607 41.667 5.29 0.00 39.25 1.40
1825 2357 5.672073 GCGTTACCTTTTCCGAGGAATTAAC 60.672 44.000 5.29 9.66 39.25 2.01
1826 2358 5.163824 CGTTACCTTTTCCGAGGAATTAACC 60.164 44.000 5.29 0.00 39.25 2.85
1827 2359 4.652679 ACCTTTTCCGAGGAATTAACCT 57.347 40.909 5.29 0.00 43.64 3.50
1828 2360 4.994282 ACCTTTTCCGAGGAATTAACCTT 58.006 39.130 5.29 0.00 40.73 3.50
1829 2361 5.391256 ACCTTTTCCGAGGAATTAACCTTT 58.609 37.500 5.29 0.00 40.73 3.11
1830 2362 5.243060 ACCTTTTCCGAGGAATTAACCTTTG 59.757 40.000 5.29 0.00 40.73 2.77
1831 2363 5.336451 CCTTTTCCGAGGAATTAACCTTTGG 60.336 44.000 5.29 0.00 40.73 3.28
1832 2364 3.359695 TCCGAGGAATTAACCTTTGGG 57.640 47.619 0.00 0.00 40.73 4.12
1833 2365 2.914278 TCCGAGGAATTAACCTTTGGGA 59.086 45.455 0.00 0.00 40.73 4.37
1834 2366 3.526019 TCCGAGGAATTAACCTTTGGGAT 59.474 43.478 0.00 0.00 40.73 3.85
1835 2367 3.883489 CCGAGGAATTAACCTTTGGGATC 59.117 47.826 0.00 0.00 40.73 3.36
1836 2368 4.523083 CGAGGAATTAACCTTTGGGATCA 58.477 43.478 0.00 0.00 40.73 2.92
1837 2369 5.133221 CGAGGAATTAACCTTTGGGATCAT 58.867 41.667 0.00 0.00 40.73 2.45
1838 2370 5.239525 CGAGGAATTAACCTTTGGGATCATC 59.760 44.000 0.00 0.00 40.73 2.92
1839 2371 6.091076 AGGAATTAACCTTTGGGATCATCA 57.909 37.500 0.00 0.00 36.86 3.07
1840 2372 5.893824 AGGAATTAACCTTTGGGATCATCAC 59.106 40.000 0.00 0.00 36.86 3.06
1841 2373 5.656416 GGAATTAACCTTTGGGATCATCACA 59.344 40.000 0.00 0.00 36.25 3.58
1842 2374 6.154363 GGAATTAACCTTTGGGATCATCACAA 59.846 38.462 0.00 0.00 38.14 3.33
1843 2375 7.147672 GGAATTAACCTTTGGGATCATCACAAT 60.148 37.037 2.30 0.00 39.85 2.71
1844 2376 6.773976 TTAACCTTTGGGATCATCACAATC 57.226 37.500 2.30 0.00 39.85 2.67
1845 2377 3.282021 ACCTTTGGGATCATCACAATCG 58.718 45.455 2.30 0.00 39.85 3.34
1846 2378 3.282021 CCTTTGGGATCATCACAATCGT 58.718 45.455 2.30 0.00 39.85 3.73
1847 2379 3.696051 CCTTTGGGATCATCACAATCGTT 59.304 43.478 2.30 0.00 39.85 3.85
1848 2380 4.439153 CCTTTGGGATCATCACAATCGTTG 60.439 45.833 2.30 0.00 39.85 4.10
1849 2381 3.348647 TGGGATCATCACAATCGTTGT 57.651 42.857 0.00 0.00 46.75 3.32
1858 2390 1.614996 ACAATCGTTGTGCCATTCCA 58.385 45.000 3.13 0.00 43.48 3.53
1859 2391 1.959985 ACAATCGTTGTGCCATTCCAA 59.040 42.857 3.13 0.00 43.48 3.53
1860 2392 2.288152 ACAATCGTTGTGCCATTCCAAC 60.288 45.455 3.13 0.00 43.48 3.77
1863 2395 3.773117 GTTGTGCCATTCCAACGAG 57.227 52.632 0.00 0.00 32.49 4.18
1864 2396 1.234821 GTTGTGCCATTCCAACGAGA 58.765 50.000 0.00 0.00 32.49 4.04
1865 2397 1.606668 GTTGTGCCATTCCAACGAGAA 59.393 47.619 0.00 0.00 32.49 2.87
1866 2398 1.522668 TGTGCCATTCCAACGAGAAG 58.477 50.000 0.00 0.00 0.00 2.85
1867 2399 0.804989 GTGCCATTCCAACGAGAAGG 59.195 55.000 0.00 0.00 0.00 3.46
1868 2400 0.690192 TGCCATTCCAACGAGAAGGA 59.310 50.000 0.00 0.00 29.07 3.36
1878 2410 5.345702 TCCAACGAGAAGGAATAATACACG 58.654 41.667 0.00 0.00 0.00 4.49
1879 2411 5.105635 TCCAACGAGAAGGAATAATACACGT 60.106 40.000 0.00 0.00 0.00 4.49
1880 2412 5.579511 CCAACGAGAAGGAATAATACACGTT 59.420 40.000 0.00 0.00 40.94 3.99
1881 2413 6.091713 CCAACGAGAAGGAATAATACACGTTT 59.908 38.462 0.00 0.00 38.90 3.60
1882 2414 7.276218 CCAACGAGAAGGAATAATACACGTTTA 59.724 37.037 0.00 0.00 38.90 2.01
1883 2415 8.649841 CAACGAGAAGGAATAATACACGTTTAA 58.350 33.333 0.00 0.00 38.90 1.52
1884 2416 8.177980 ACGAGAAGGAATAATACACGTTTAAC 57.822 34.615 0.00 0.00 0.00 2.01
1885 2417 8.031277 ACGAGAAGGAATAATACACGTTTAACT 58.969 33.333 0.00 0.00 0.00 2.24
1886 2418 8.318876 CGAGAAGGAATAATACACGTTTAACTG 58.681 37.037 0.00 0.00 0.00 3.16
1887 2419 7.971455 AGAAGGAATAATACACGTTTAACTGC 58.029 34.615 0.00 0.00 0.00 4.40
1888 2420 7.822822 AGAAGGAATAATACACGTTTAACTGCT 59.177 33.333 0.00 0.00 0.00 4.24
1889 2421 7.916914 AGGAATAATACACGTTTAACTGCTT 57.083 32.000 0.00 0.00 0.00 3.91
1890 2422 7.748847 AGGAATAATACACGTTTAACTGCTTG 58.251 34.615 0.00 0.00 0.00 4.01
1891 2423 6.468000 GGAATAATACACGTTTAACTGCTTGC 59.532 38.462 0.00 0.00 0.00 4.01
1892 2424 4.822036 AATACACGTTTAACTGCTTGCA 57.178 36.364 0.00 0.00 0.00 4.08
1893 2425 4.822036 ATACACGTTTAACTGCTTGCAA 57.178 36.364 0.00 0.00 0.00 4.08
1894 2426 3.065019 ACACGTTTAACTGCTTGCAAG 57.935 42.857 22.44 22.44 0.00 4.01
1895 2427 2.680841 ACACGTTTAACTGCTTGCAAGA 59.319 40.909 30.39 13.73 0.00 3.02
1896 2428 3.035942 CACGTTTAACTGCTTGCAAGAC 58.964 45.455 30.39 20.19 0.00 3.01
1897 2429 2.032924 ACGTTTAACTGCTTGCAAGACC 59.967 45.455 30.39 13.63 0.00 3.85
1898 2430 2.604614 CGTTTAACTGCTTGCAAGACCC 60.605 50.000 30.39 12.88 0.00 4.46
1899 2431 1.616159 TTAACTGCTTGCAAGACCCC 58.384 50.000 30.39 12.51 0.00 4.95
1900 2432 0.251165 TAACTGCTTGCAAGACCCCC 60.251 55.000 30.39 12.13 0.00 5.40
1901 2433 2.011617 AACTGCTTGCAAGACCCCCT 62.012 55.000 30.39 5.56 0.00 4.79
1902 2434 1.676967 CTGCTTGCAAGACCCCCTC 60.677 63.158 30.39 10.65 0.00 4.30
1903 2435 2.416107 CTGCTTGCAAGACCCCCTCA 62.416 60.000 30.39 14.66 0.00 3.86
1904 2436 1.228552 GCTTGCAAGACCCCCTCAA 60.229 57.895 30.39 0.00 0.00 3.02
1905 2437 0.613012 GCTTGCAAGACCCCCTCAAT 60.613 55.000 30.39 0.00 0.00 2.57
1906 2438 1.467920 CTTGCAAGACCCCCTCAATC 58.532 55.000 22.31 0.00 0.00 2.67
1907 2439 0.776810 TTGCAAGACCCCCTCAATCA 59.223 50.000 0.00 0.00 0.00 2.57
1908 2440 0.776810 TGCAAGACCCCCTCAATCAA 59.223 50.000 0.00 0.00 0.00 2.57
1909 2441 1.146774 TGCAAGACCCCCTCAATCAAA 59.853 47.619 0.00 0.00 0.00 2.69
1910 2442 2.225343 TGCAAGACCCCCTCAATCAAAT 60.225 45.455 0.00 0.00 0.00 2.32
1911 2443 2.167075 GCAAGACCCCCTCAATCAAATG 59.833 50.000 0.00 0.00 0.00 2.32
1912 2444 2.762327 CAAGACCCCCTCAATCAAATGG 59.238 50.000 0.00 0.00 0.00 3.16
1913 2445 2.003072 AGACCCCCTCAATCAAATGGT 58.997 47.619 0.00 0.00 0.00 3.55
1914 2446 2.024941 AGACCCCCTCAATCAAATGGTC 60.025 50.000 0.00 0.00 40.81 4.02
1915 2447 1.007118 ACCCCCTCAATCAAATGGTCC 59.993 52.381 0.00 0.00 0.00 4.46
1916 2448 1.689258 CCCCCTCAATCAAATGGTCCC 60.689 57.143 0.00 0.00 0.00 4.46
1917 2449 1.689258 CCCCTCAATCAAATGGTCCCC 60.689 57.143 0.00 0.00 0.00 4.81
1918 2450 1.288932 CCCTCAATCAAATGGTCCCCT 59.711 52.381 0.00 0.00 0.00 4.79
1919 2451 2.513738 CCCTCAATCAAATGGTCCCCTA 59.486 50.000 0.00 0.00 0.00 3.53
1920 2452 3.052944 CCCTCAATCAAATGGTCCCCTAA 60.053 47.826 0.00 0.00 0.00 2.69
1921 2453 3.954258 CCTCAATCAAATGGTCCCCTAAC 59.046 47.826 0.00 0.00 0.00 2.34
1922 2454 4.569653 CCTCAATCAAATGGTCCCCTAACA 60.570 45.833 0.00 0.00 0.00 2.41
1923 2455 5.203528 CTCAATCAAATGGTCCCCTAACAT 58.796 41.667 0.00 0.00 0.00 2.71
1924 2456 4.955450 TCAATCAAATGGTCCCCTAACATG 59.045 41.667 0.00 0.00 0.00 3.21
1925 2457 3.380471 TCAAATGGTCCCCTAACATGG 57.620 47.619 0.00 0.00 0.00 3.66
1926 2458 2.922955 TCAAATGGTCCCCTAACATGGA 59.077 45.455 0.00 0.00 0.00 3.41
1931 2463 2.891191 GTCCCCTAACATGGACCAAA 57.109 50.000 0.00 0.00 44.32 3.28
1932 2464 3.163616 GTCCCCTAACATGGACCAAAA 57.836 47.619 0.00 0.00 44.32 2.44
1933 2465 3.502356 GTCCCCTAACATGGACCAAAAA 58.498 45.455 0.00 0.00 44.32 1.94
1934 2466 3.509967 GTCCCCTAACATGGACCAAAAAG 59.490 47.826 0.00 0.00 44.32 2.27
1935 2467 3.141272 TCCCCTAACATGGACCAAAAAGT 59.859 43.478 0.00 0.00 0.00 2.66
1936 2468 3.901222 CCCCTAACATGGACCAAAAAGTT 59.099 43.478 0.00 4.33 0.00 2.66
1937 2469 4.346709 CCCCTAACATGGACCAAAAAGTTT 59.653 41.667 0.00 0.00 0.00 2.66
1938 2470 5.163248 CCCCTAACATGGACCAAAAAGTTTT 60.163 40.000 0.00 0.00 0.00 2.43
1939 2471 6.042208 CCCCTAACATGGACCAAAAAGTTTTA 59.958 38.462 0.00 0.00 0.00 1.52
1940 2472 6.926826 CCCTAACATGGACCAAAAAGTTTTAC 59.073 38.462 0.00 0.00 0.00 2.01
1941 2473 7.418025 CCCTAACATGGACCAAAAAGTTTTACA 60.418 37.037 0.00 0.00 0.00 2.41
1942 2474 7.982354 CCTAACATGGACCAAAAAGTTTTACAA 59.018 33.333 0.00 0.00 0.00 2.41
1943 2475 9.372369 CTAACATGGACCAAAAAGTTTTACAAA 57.628 29.630 0.00 0.00 0.00 2.83
1944 2476 8.622948 AACATGGACCAAAAAGTTTTACAAAA 57.377 26.923 0.00 0.00 0.00 2.44
1945 2477 8.622948 ACATGGACCAAAAAGTTTTACAAAAA 57.377 26.923 0.00 0.00 0.00 1.94
1964 2496 4.701956 AAAATAACGTGAAGCCCATCTG 57.298 40.909 0.00 0.00 0.00 2.90
1965 2497 2.332063 ATAACGTGAAGCCCATCTGG 57.668 50.000 0.00 0.00 37.09 3.86
1966 2498 0.981183 TAACGTGAAGCCCATCTGGT 59.019 50.000 0.00 0.00 36.04 4.00
1967 2499 0.321653 AACGTGAAGCCCATCTGGTC 60.322 55.000 0.00 0.00 36.04 4.02
1968 2500 1.450312 CGTGAAGCCCATCTGGTCC 60.450 63.158 0.00 0.00 36.04 4.46
1969 2501 1.077429 GTGAAGCCCATCTGGTCCC 60.077 63.158 0.00 0.00 36.04 4.46
1970 2502 2.190578 GAAGCCCATCTGGTCCCG 59.809 66.667 0.00 0.00 36.04 5.14
1971 2503 3.406595 GAAGCCCATCTGGTCCCGG 62.407 68.421 0.00 0.00 36.04 5.73
1976 2508 3.411517 CATCTGGTCCCGGGGCTT 61.412 66.667 27.44 4.65 0.00 4.35
1977 2509 2.614013 ATCTGGTCCCGGGGCTTT 60.614 61.111 27.44 4.24 0.00 3.51
1978 2510 2.238701 ATCTGGTCCCGGGGCTTTT 61.239 57.895 27.44 4.65 0.00 2.27
1979 2511 0.917333 ATCTGGTCCCGGGGCTTTTA 60.917 55.000 27.44 8.84 0.00 1.52
1980 2512 1.135068 TCTGGTCCCGGGGCTTTTAA 61.135 55.000 27.44 3.35 0.00 1.52
1981 2513 0.251430 CTGGTCCCGGGGCTTTTAAA 60.251 55.000 27.44 0.00 0.00 1.52
1982 2514 0.410270 TGGTCCCGGGGCTTTTAAAT 59.590 50.000 27.44 0.00 0.00 1.40
1983 2515 1.108776 GGTCCCGGGGCTTTTAAATC 58.891 55.000 27.44 0.47 0.00 2.17
1984 2516 1.617533 GGTCCCGGGGCTTTTAAATCA 60.618 52.381 27.44 0.00 0.00 2.57
1985 2517 1.475280 GTCCCGGGGCTTTTAAATCAC 59.525 52.381 20.78 0.38 0.00 3.06
1986 2518 0.821517 CCCGGGGCTTTTAAATCACC 59.178 55.000 14.71 0.00 0.00 4.02
1987 2519 1.551452 CCGGGGCTTTTAAATCACCA 58.449 50.000 0.67 0.00 0.00 4.17
1988 2520 1.896465 CCGGGGCTTTTAAATCACCAA 59.104 47.619 0.67 0.00 0.00 3.67
1989 2521 2.499693 CCGGGGCTTTTAAATCACCAAT 59.500 45.455 0.67 0.00 0.00 3.16
1990 2522 3.702045 CCGGGGCTTTTAAATCACCAATA 59.298 43.478 0.67 0.00 0.00 1.90
1991 2523 4.343814 CCGGGGCTTTTAAATCACCAATAT 59.656 41.667 0.67 0.00 0.00 1.28
1992 2524 5.508994 CCGGGGCTTTTAAATCACCAATATC 60.509 44.000 0.67 0.00 0.00 1.63
1993 2525 5.068460 CGGGGCTTTTAAATCACCAATATCA 59.932 40.000 0.67 0.00 0.00 2.15
1994 2526 6.406400 CGGGGCTTTTAAATCACCAATATCAA 60.406 38.462 0.67 0.00 0.00 2.57
1995 2527 7.334858 GGGGCTTTTAAATCACCAATATCAAA 58.665 34.615 0.00 0.00 0.00 2.69
1996 2528 7.279981 GGGGCTTTTAAATCACCAATATCAAAC 59.720 37.037 0.00 0.00 0.00 2.93
1997 2529 7.821846 GGGCTTTTAAATCACCAATATCAAACA 59.178 33.333 0.00 0.00 0.00 2.83
1998 2530 9.213799 GGCTTTTAAATCACCAATATCAAACAA 57.786 29.630 0.00 0.00 0.00 2.83
2007 2539 8.684386 TCACCAATATCAAACAAAGTCTTACA 57.316 30.769 0.00 0.00 0.00 2.41
2008 2540 9.126151 TCACCAATATCAAACAAAGTCTTACAA 57.874 29.630 0.00 0.00 0.00 2.41
2009 2541 9.743057 CACCAATATCAAACAAAGTCTTACAAA 57.257 29.630 0.00 0.00 0.00 2.83
2010 2542 9.744468 ACCAATATCAAACAAAGTCTTACAAAC 57.256 29.630 0.00 0.00 0.00 2.93
2011 2543 9.743057 CCAATATCAAACAAAGTCTTACAAACA 57.257 29.630 0.00 0.00 0.00 2.83
2016 2548 8.909708 TCAAACAAAGTCTTACAAACATCTTG 57.090 30.769 0.00 0.00 0.00 3.02
2017 2549 8.735315 TCAAACAAAGTCTTACAAACATCTTGA 58.265 29.630 0.00 0.00 0.00 3.02
2018 2550 9.013490 CAAACAAAGTCTTACAAACATCTTGAG 57.987 33.333 0.00 0.00 0.00 3.02
2019 2551 6.729187 ACAAAGTCTTACAAACATCTTGAGC 58.271 36.000 0.00 0.00 0.00 4.26
2020 2552 6.318648 ACAAAGTCTTACAAACATCTTGAGCA 59.681 34.615 0.00 0.00 0.00 4.26
2021 2553 6.942532 AAGTCTTACAAACATCTTGAGCAA 57.057 33.333 0.00 0.00 0.00 3.91
2022 2554 7.516198 AAGTCTTACAAACATCTTGAGCAAT 57.484 32.000 0.00 0.00 0.00 3.56
2023 2555 8.621532 AAGTCTTACAAACATCTTGAGCAATA 57.378 30.769 0.00 0.00 0.00 1.90
2024 2556 8.798859 AGTCTTACAAACATCTTGAGCAATAT 57.201 30.769 0.00 0.00 0.00 1.28
2025 2557 9.890629 AGTCTTACAAACATCTTGAGCAATATA 57.109 29.630 0.00 0.00 0.00 0.86
2031 2563 8.186821 ACAAACATCTTGAGCAATATAAGAAGC 58.813 33.333 0.00 0.00 34.47 3.86
2032 2564 7.870509 AACATCTTGAGCAATATAAGAAGCA 57.129 32.000 0.00 0.00 34.47 3.91
2033 2565 7.870509 ACATCTTGAGCAATATAAGAAGCAA 57.129 32.000 0.00 0.00 34.47 3.91
2034 2566 7.928103 ACATCTTGAGCAATATAAGAAGCAAG 58.072 34.615 0.00 0.00 34.47 4.01
2035 2567 7.772292 ACATCTTGAGCAATATAAGAAGCAAGA 59.228 33.333 0.00 0.00 42.90 3.02
2036 2568 8.618677 CATCTTGAGCAATATAAGAAGCAAGAA 58.381 33.333 0.00 0.00 42.28 2.52
2037 2569 8.206325 TCTTGAGCAATATAAGAAGCAAGAAG 57.794 34.615 0.00 0.00 37.95 2.85
2038 2570 6.932356 TGAGCAATATAAGAAGCAAGAAGG 57.068 37.500 0.00 0.00 0.00 3.46
2039 2571 5.824624 TGAGCAATATAAGAAGCAAGAAGGG 59.175 40.000 0.00 0.00 0.00 3.95
2040 2572 4.582240 AGCAATATAAGAAGCAAGAAGGGC 59.418 41.667 0.00 0.00 0.00 5.19
2041 2573 4.339247 GCAATATAAGAAGCAAGAAGGGCA 59.661 41.667 0.00 0.00 0.00 5.36
2042 2574 5.010415 GCAATATAAGAAGCAAGAAGGGCAT 59.990 40.000 0.00 0.00 0.00 4.40
2043 2575 6.462067 GCAATATAAGAAGCAAGAAGGGCATT 60.462 38.462 0.00 0.00 0.00 3.56
2044 2576 4.996788 ATAAGAAGCAAGAAGGGCATTG 57.003 40.909 0.00 0.00 0.00 2.82
2045 2577 2.299326 AGAAGCAAGAAGGGCATTGT 57.701 45.000 0.00 0.00 0.00 2.71
2046 2578 2.601905 AGAAGCAAGAAGGGCATTGTT 58.398 42.857 0.00 0.00 0.00 2.83
2047 2579 2.560105 AGAAGCAAGAAGGGCATTGTTC 59.440 45.455 0.00 0.00 0.00 3.18
2048 2580 1.999648 AGCAAGAAGGGCATTGTTCA 58.000 45.000 0.00 0.00 0.00 3.18
2049 2581 2.532843 AGCAAGAAGGGCATTGTTCAT 58.467 42.857 0.00 0.00 0.00 2.57
2050 2582 2.494870 AGCAAGAAGGGCATTGTTCATC 59.505 45.455 0.00 0.00 0.00 2.92
2051 2583 2.494870 GCAAGAAGGGCATTGTTCATCT 59.505 45.455 0.00 0.00 0.00 2.90
2052 2584 3.696051 GCAAGAAGGGCATTGTTCATCTA 59.304 43.478 0.00 0.00 0.00 1.98
2053 2585 4.158394 GCAAGAAGGGCATTGTTCATCTAA 59.842 41.667 0.00 0.00 0.00 2.10
2054 2586 5.678107 GCAAGAAGGGCATTGTTCATCTAAG 60.678 44.000 0.00 0.00 0.00 2.18
2055 2587 5.184892 AGAAGGGCATTGTTCATCTAAGT 57.815 39.130 0.00 0.00 0.00 2.24
2056 2588 4.946157 AGAAGGGCATTGTTCATCTAAGTG 59.054 41.667 0.00 0.00 0.00 3.16
2057 2589 3.624777 AGGGCATTGTTCATCTAAGTGG 58.375 45.455 0.00 0.00 0.00 4.00
2058 2590 3.266772 AGGGCATTGTTCATCTAAGTGGA 59.733 43.478 0.00 0.00 0.00 4.02
2059 2591 3.378427 GGGCATTGTTCATCTAAGTGGAC 59.622 47.826 0.00 0.00 0.00 4.02
2060 2592 4.009675 GGCATTGTTCATCTAAGTGGACA 58.990 43.478 0.00 0.00 35.83 4.02
2061 2593 4.641989 GGCATTGTTCATCTAAGTGGACAT 59.358 41.667 0.00 0.00 37.44 3.06
2062 2594 5.126061 GGCATTGTTCATCTAAGTGGACATT 59.874 40.000 0.00 0.00 37.44 2.71
2063 2595 6.261118 GCATTGTTCATCTAAGTGGACATTC 58.739 40.000 0.00 0.00 37.44 2.67
2064 2596 6.094603 GCATTGTTCATCTAAGTGGACATTCT 59.905 38.462 0.00 0.00 37.44 2.40
2065 2597 7.362401 GCATTGTTCATCTAAGTGGACATTCTT 60.362 37.037 0.00 0.00 37.44 2.52
2066 2598 7.672983 TTGTTCATCTAAGTGGACATTCTTC 57.327 36.000 0.00 0.00 37.44 2.87
2067 2599 7.009179 TGTTCATCTAAGTGGACATTCTTCT 57.991 36.000 0.00 0.00 32.72 2.85
2068 2600 6.875726 TGTTCATCTAAGTGGACATTCTTCTG 59.124 38.462 0.00 0.00 32.72 3.02
2069 2601 5.423015 TCATCTAAGTGGACATTCTTCTGC 58.577 41.667 0.00 0.00 0.00 4.26
2070 2602 3.849911 TCTAAGTGGACATTCTTCTGCG 58.150 45.455 0.00 0.00 0.00 5.18
2071 2603 1.813513 AAGTGGACATTCTTCTGCGG 58.186 50.000 0.00 0.00 0.00 5.69
2072 2604 0.976641 AGTGGACATTCTTCTGCGGA 59.023 50.000 0.00 0.00 0.00 5.54
2073 2605 1.079503 GTGGACATTCTTCTGCGGAC 58.920 55.000 0.00 0.00 0.00 4.79
2074 2606 0.684535 TGGACATTCTTCTGCGGACA 59.315 50.000 0.00 0.00 0.00 4.02
2075 2607 1.071542 TGGACATTCTTCTGCGGACAA 59.928 47.619 0.00 0.00 0.00 3.18
2076 2608 1.734465 GGACATTCTTCTGCGGACAAG 59.266 52.381 0.00 0.00 0.00 3.16
2077 2609 1.734465 GACATTCTTCTGCGGACAAGG 59.266 52.381 0.00 0.00 0.00 3.61
2078 2610 1.089920 CATTCTTCTGCGGACAAGGG 58.910 55.000 0.00 0.00 0.00 3.95
2079 2611 0.984230 ATTCTTCTGCGGACAAGGGA 59.016 50.000 0.00 0.00 0.00 4.20
2080 2612 0.984230 TTCTTCTGCGGACAAGGGAT 59.016 50.000 0.00 0.00 0.00 3.85
2081 2613 1.860641 TCTTCTGCGGACAAGGGATA 58.139 50.000 0.00 0.00 0.00 2.59
2082 2614 2.184533 TCTTCTGCGGACAAGGGATAA 58.815 47.619 0.00 0.00 0.00 1.75
2083 2615 2.569853 TCTTCTGCGGACAAGGGATAAA 59.430 45.455 0.00 0.00 0.00 1.40
2084 2616 3.008594 TCTTCTGCGGACAAGGGATAAAA 59.991 43.478 0.00 0.00 0.00 1.52
2085 2617 2.706890 TCTGCGGACAAGGGATAAAAC 58.293 47.619 0.00 0.00 0.00 2.43
2086 2618 1.743394 CTGCGGACAAGGGATAAAACC 59.257 52.381 0.00 0.00 0.00 3.27
2087 2619 1.353022 TGCGGACAAGGGATAAAACCT 59.647 47.619 0.00 0.00 40.96 3.50
2088 2620 1.743394 GCGGACAAGGGATAAAACCTG 59.257 52.381 0.00 0.00 38.63 4.00
2089 2621 1.743394 CGGACAAGGGATAAAACCTGC 59.257 52.381 0.00 0.00 38.63 4.85
2090 2622 2.618045 CGGACAAGGGATAAAACCTGCT 60.618 50.000 0.00 0.00 38.63 4.24
2091 2623 2.755103 GGACAAGGGATAAAACCTGCTG 59.245 50.000 0.00 0.00 38.63 4.41
2092 2624 2.755103 GACAAGGGATAAAACCTGCTGG 59.245 50.000 8.29 8.29 38.63 4.85
2101 2633 4.821935 ACCTGCTGGTTAGGTTGC 57.178 55.556 9.88 0.00 46.13 4.17
2102 2634 1.843421 ACCTGCTGGTTAGGTTGCA 59.157 52.632 9.88 0.00 46.13 4.08
2103 2635 0.184933 ACCTGCTGGTTAGGTTGCAA 59.815 50.000 9.88 0.00 46.13 4.08
2104 2636 1.327303 CCTGCTGGTTAGGTTGCAAA 58.673 50.000 0.00 0.00 34.90 3.68
2105 2637 1.686052 CCTGCTGGTTAGGTTGCAAAA 59.314 47.619 0.00 0.00 34.90 2.44
2106 2638 2.545742 CCTGCTGGTTAGGTTGCAAAAC 60.546 50.000 0.00 1.81 34.90 2.43
2108 2640 2.763448 TGCTGGTTAGGTTGCAAAACTT 59.237 40.909 0.00 0.00 45.56 2.66
2109 2641 3.181480 TGCTGGTTAGGTTGCAAAACTTC 60.181 43.478 0.00 0.34 45.56 3.01
2110 2642 3.068165 GCTGGTTAGGTTGCAAAACTTCT 59.932 43.478 0.00 0.00 45.56 2.85
2111 2643 4.610945 CTGGTTAGGTTGCAAAACTTCTG 58.389 43.478 0.00 0.00 45.56 3.02
2112 2644 4.274147 TGGTTAGGTTGCAAAACTTCTGA 58.726 39.130 0.00 0.00 45.56 3.27
2113 2645 4.338118 TGGTTAGGTTGCAAAACTTCTGAG 59.662 41.667 0.00 0.00 45.56 3.35
2114 2646 4.261614 GGTTAGGTTGCAAAACTTCTGAGG 60.262 45.833 0.00 0.00 45.56 3.86
2115 2647 3.018423 AGGTTGCAAAACTTCTGAGGT 57.982 42.857 0.00 0.00 45.56 3.85
2116 2648 2.689983 AGGTTGCAAAACTTCTGAGGTG 59.310 45.455 0.00 0.00 45.56 4.00
2117 2649 2.687935 GGTTGCAAAACTTCTGAGGTGA 59.312 45.455 0.00 0.00 0.00 4.02
2118 2650 3.130340 GGTTGCAAAACTTCTGAGGTGAA 59.870 43.478 0.00 0.00 0.00 3.18
2119 2651 4.381505 GGTTGCAAAACTTCTGAGGTGAAA 60.382 41.667 0.00 0.00 0.00 2.69
2120 2652 5.351458 GTTGCAAAACTTCTGAGGTGAAAT 58.649 37.500 0.00 0.00 0.00 2.17
2121 2653 6.460953 GGTTGCAAAACTTCTGAGGTGAAATA 60.461 38.462 0.00 0.00 0.00 1.40
2122 2654 6.899393 TGCAAAACTTCTGAGGTGAAATAT 57.101 33.333 0.00 0.00 0.00 1.28
2123 2655 7.288810 TGCAAAACTTCTGAGGTGAAATATT 57.711 32.000 0.00 0.00 0.00 1.28
2124 2656 8.402798 TGCAAAACTTCTGAGGTGAAATATTA 57.597 30.769 0.00 0.00 0.00 0.98
2125 2657 8.514594 TGCAAAACTTCTGAGGTGAAATATTAG 58.485 33.333 0.00 0.00 0.00 1.73
2126 2658 8.730680 GCAAAACTTCTGAGGTGAAATATTAGA 58.269 33.333 0.00 0.00 0.00 2.10
2156 2688 9.941325 ATATTCTGTGATATGATCCTTCAACTC 57.059 33.333 0.00 0.00 34.96 3.01
2157 2689 6.166984 TCTGTGATATGATCCTTCAACTCC 57.833 41.667 0.00 0.00 34.96 3.85
2158 2690 5.662657 TCTGTGATATGATCCTTCAACTCCA 59.337 40.000 0.00 0.00 34.96 3.86
2159 2691 6.328410 TCTGTGATATGATCCTTCAACTCCAT 59.672 38.462 0.00 0.00 34.96 3.41
2160 2692 7.510343 TCTGTGATATGATCCTTCAACTCCATA 59.490 37.037 0.00 0.00 34.96 2.74
2161 2693 7.674120 TGTGATATGATCCTTCAACTCCATAG 58.326 38.462 0.00 0.00 34.96 2.23
2162 2694 6.593382 GTGATATGATCCTTCAACTCCATAGC 59.407 42.308 0.00 0.00 34.96 2.97
2163 2695 6.499699 TGATATGATCCTTCAACTCCATAGCT 59.500 38.462 0.00 0.00 34.96 3.32
2164 2696 5.643421 ATGATCCTTCAACTCCATAGCTT 57.357 39.130 0.00 0.00 34.96 3.74
2165 2697 4.774124 TGATCCTTCAACTCCATAGCTTG 58.226 43.478 0.00 0.00 0.00 4.01
2166 2698 2.991250 TCCTTCAACTCCATAGCTTGC 58.009 47.619 0.00 0.00 0.00 4.01
2167 2699 2.019984 CCTTCAACTCCATAGCTTGCC 58.980 52.381 0.00 0.00 0.00 4.52
2168 2700 1.667724 CTTCAACTCCATAGCTTGCCG 59.332 52.381 0.00 0.00 0.00 5.69
2169 2701 0.744414 TCAACTCCATAGCTTGCCGC 60.744 55.000 0.00 0.00 39.57 6.53
2170 2702 1.452108 AACTCCATAGCTTGCCGCC 60.452 57.895 0.00 0.00 40.39 6.13
2171 2703 2.190313 CTCCATAGCTTGCCGCCA 59.810 61.111 0.00 0.00 40.39 5.69
2172 2704 1.451927 CTCCATAGCTTGCCGCCAA 60.452 57.895 0.00 0.00 40.39 4.52
2173 2705 1.001517 TCCATAGCTTGCCGCCAAA 60.002 52.632 0.00 0.00 40.39 3.28
2174 2706 1.139520 CCATAGCTTGCCGCCAAAC 59.860 57.895 0.00 0.00 40.39 2.93
2175 2707 1.139520 CATAGCTTGCCGCCAAACC 59.860 57.895 0.00 0.00 40.39 3.27
2176 2708 2.052104 ATAGCTTGCCGCCAAACCC 61.052 57.895 0.00 0.00 40.39 4.11
2179 2711 3.683937 CTTGCCGCCAAACCCCTG 61.684 66.667 0.00 0.00 0.00 4.45
2180 2712 4.211330 TTGCCGCCAAACCCCTGA 62.211 61.111 0.00 0.00 0.00 3.86
2181 2713 3.740495 TTGCCGCCAAACCCCTGAA 62.740 57.895 0.00 0.00 0.00 3.02
2182 2714 2.679996 GCCGCCAAACCCCTGAAT 60.680 61.111 0.00 0.00 0.00 2.57
2183 2715 2.710902 GCCGCCAAACCCCTGAATC 61.711 63.158 0.00 0.00 0.00 2.52
2184 2716 1.304052 CCGCCAAACCCCTGAATCA 60.304 57.895 0.00 0.00 0.00 2.57
2185 2717 0.684153 CCGCCAAACCCCTGAATCAT 60.684 55.000 0.00 0.00 0.00 2.45
2186 2718 0.740737 CGCCAAACCCCTGAATCATC 59.259 55.000 0.00 0.00 0.00 2.92
2187 2719 1.851304 GCCAAACCCCTGAATCATCA 58.149 50.000 0.00 0.00 0.00 3.07
2188 2720 2.178580 GCCAAACCCCTGAATCATCAA 58.821 47.619 0.00 0.00 34.49 2.57
2189 2721 2.167075 GCCAAACCCCTGAATCATCAAG 59.833 50.000 0.00 0.00 34.49 3.02
2190 2722 2.762327 CCAAACCCCTGAATCATCAAGG 59.238 50.000 0.00 0.00 36.98 3.61
2191 2723 3.564133 CCAAACCCCTGAATCATCAAGGA 60.564 47.826 0.00 0.00 39.20 3.36
2192 2724 3.659183 AACCCCTGAATCATCAAGGAG 57.341 47.619 0.00 0.00 39.20 3.69
2193 2725 2.566746 ACCCCTGAATCATCAAGGAGT 58.433 47.619 0.00 0.00 39.20 3.85
2194 2726 2.922283 ACCCCTGAATCATCAAGGAGTT 59.078 45.455 0.00 0.00 39.20 3.01
2195 2727 3.334881 ACCCCTGAATCATCAAGGAGTTT 59.665 43.478 0.00 0.00 39.20 2.66
2196 2728 3.950395 CCCCTGAATCATCAAGGAGTTTC 59.050 47.826 0.00 0.00 39.20 2.78
2197 2729 4.324874 CCCCTGAATCATCAAGGAGTTTCT 60.325 45.833 0.00 0.00 39.20 2.52
2198 2730 5.259632 CCCTGAATCATCAAGGAGTTTCTT 58.740 41.667 0.00 0.00 39.20 2.52
2199 2731 6.418101 CCCTGAATCATCAAGGAGTTTCTTA 58.582 40.000 0.00 0.00 39.20 2.10
2200 2732 6.886459 CCCTGAATCATCAAGGAGTTTCTTAA 59.114 38.462 0.00 0.00 39.20 1.85
2201 2733 7.559170 CCCTGAATCATCAAGGAGTTTCTTAAT 59.441 37.037 0.00 0.00 39.20 1.40
2202 2734 9.618890 CCTGAATCATCAAGGAGTTTCTTAATA 57.381 33.333 0.00 0.00 34.49 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
133 135 5.121454 CCTCTTGTTTAACAGCTGTCATCTC 59.879 44.000 21.95 10.50 0.00 2.75
695 1217 0.176680 AGTAGTGGATGCAAGGCTCG 59.823 55.000 0.00 0.00 0.00 5.03
745 1272 5.054477 GGTTGTAGAGCTTAACTGTGTTGA 58.946 41.667 0.00 0.00 0.00 3.18
1331 1861 5.753921 GTCTAAGCAGCAAATAACCGATAGT 59.246 40.000 0.00 0.00 0.00 2.12
1363 1893 4.237349 AGGTTGTTTCAAAAGCATACCG 57.763 40.909 0.00 0.00 0.00 4.02
1629 2161 5.466819 TGTCTTACGAGTGTTTCCATACAG 58.533 41.667 0.00 0.00 0.00 2.74
1630 2162 5.456548 TGTCTTACGAGTGTTTCCATACA 57.543 39.130 0.00 0.00 0.00 2.29
1631 2163 6.963049 ATTGTCTTACGAGTGTTTCCATAC 57.037 37.500 0.00 0.00 0.00 2.39
1632 2164 9.491675 TTTTATTGTCTTACGAGTGTTTCCATA 57.508 29.630 0.00 0.00 0.00 2.74
1633 2165 7.972832 TTTATTGTCTTACGAGTGTTTCCAT 57.027 32.000 0.00 0.00 0.00 3.41
1634 2166 7.280428 TGTTTTATTGTCTTACGAGTGTTTCCA 59.720 33.333 0.00 0.00 0.00 3.53
1635 2167 7.632721 TGTTTTATTGTCTTACGAGTGTTTCC 58.367 34.615 0.00 0.00 0.00 3.13
1636 2168 9.659830 AATGTTTTATTGTCTTACGAGTGTTTC 57.340 29.630 0.00 0.00 0.00 2.78
1637 2169 9.445786 CAATGTTTTATTGTCTTACGAGTGTTT 57.554 29.630 0.00 0.00 0.00 2.83
1638 2170 8.617809 ACAATGTTTTATTGTCTTACGAGTGTT 58.382 29.630 0.00 0.00 37.69 3.32
1639 2171 8.149973 ACAATGTTTTATTGTCTTACGAGTGT 57.850 30.769 0.00 0.00 37.69 3.55
1650 2182 9.691362 GGTTGATTACAGACAATGTTTTATTGT 57.309 29.630 5.07 5.07 39.96 2.71
1651 2183 9.912634 AGGTTGATTACAGACAATGTTTTATTG 57.087 29.630 0.00 0.00 39.96 1.90
1654 2186 9.959749 GAAAGGTTGATTACAGACAATGTTTTA 57.040 29.630 0.00 0.00 39.96 1.52
1655 2187 7.647715 CGAAAGGTTGATTACAGACAATGTTTT 59.352 33.333 0.00 0.00 39.96 2.43
1656 2188 7.138736 CGAAAGGTTGATTACAGACAATGTTT 58.861 34.615 0.00 0.00 39.96 2.83
1657 2189 6.668323 CGAAAGGTTGATTACAGACAATGTT 58.332 36.000 0.00 0.00 39.96 2.71
1658 2190 6.241207 CGAAAGGTTGATTACAGACAATGT 57.759 37.500 0.00 0.00 46.45 2.71
1679 2211 3.006537 ACTCAGAATTCTTTCGTTCCCGA 59.993 43.478 4.86 0.00 42.41 5.14
1680 2212 3.326747 ACTCAGAATTCTTTCGTTCCCG 58.673 45.455 4.86 0.00 36.93 5.14
1681 2213 4.315803 TGACTCAGAATTCTTTCGTTCCC 58.684 43.478 4.86 0.00 36.93 3.97
1682 2214 5.119434 GTCTGACTCAGAATTCTTTCGTTCC 59.881 44.000 10.45 0.00 42.46 3.62
1683 2215 5.923684 AGTCTGACTCAGAATTCTTTCGTTC 59.076 40.000 10.45 0.00 42.46 3.95
1684 2216 5.848406 AGTCTGACTCAGAATTCTTTCGTT 58.152 37.500 10.45 0.00 42.46 3.85
1685 2217 5.461032 AGTCTGACTCAGAATTCTTTCGT 57.539 39.130 10.45 2.99 42.46 3.85
1686 2218 7.309177 TCTTAGTCTGACTCAGAATTCTTTCG 58.691 38.462 17.05 0.00 42.46 3.46
1687 2219 9.651913 ATTCTTAGTCTGACTCAGAATTCTTTC 57.348 33.333 28.75 3.51 43.06 2.62
1690 2222 8.691797 GGTATTCTTAGTCTGACTCAGAATTCT 58.308 37.037 34.40 22.57 43.06 2.40
1691 2223 8.470805 TGGTATTCTTAGTCTGACTCAGAATTC 58.529 37.037 34.40 30.31 43.06 2.17
1692 2224 8.367660 TGGTATTCTTAGTCTGACTCAGAATT 57.632 34.615 34.40 24.09 43.06 2.17
1693 2225 7.069331 CCTGGTATTCTTAGTCTGACTCAGAAT 59.931 40.741 32.95 32.95 45.73 2.40
1694 2226 6.378564 CCTGGTATTCTTAGTCTGACTCAGAA 59.621 42.308 27.39 27.39 42.46 3.02
1695 2227 5.888724 CCTGGTATTCTTAGTCTGACTCAGA 59.111 44.000 14.62 15.29 38.25 3.27
1696 2228 5.654650 ACCTGGTATTCTTAGTCTGACTCAG 59.345 44.000 14.62 13.04 0.00 3.35
1697 2229 5.580998 ACCTGGTATTCTTAGTCTGACTCA 58.419 41.667 14.62 2.11 0.00 3.41
1698 2230 7.055378 TCTACCTGGTATTCTTAGTCTGACTC 58.945 42.308 14.62 0.00 0.00 3.36
1699 2231 6.971340 TCTACCTGGTATTCTTAGTCTGACT 58.029 40.000 15.57 15.57 0.00 3.41
1700 2232 7.642082 TTCTACCTGGTATTCTTAGTCTGAC 57.358 40.000 7.07 0.00 0.00 3.51
1701 2233 8.660295 TTTTCTACCTGGTATTCTTAGTCTGA 57.340 34.615 7.07 0.00 0.00 3.27
1702 2234 7.492994 GCTTTTCTACCTGGTATTCTTAGTCTG 59.507 40.741 7.07 0.00 0.00 3.51
1703 2235 7.364851 GGCTTTTCTACCTGGTATTCTTAGTCT 60.365 40.741 7.07 0.00 0.00 3.24
1704 2236 6.762187 GGCTTTTCTACCTGGTATTCTTAGTC 59.238 42.308 7.07 0.19 0.00 2.59
1705 2237 6.444171 AGGCTTTTCTACCTGGTATTCTTAGT 59.556 38.462 7.07 0.00 34.07 2.24
1706 2238 6.890293 AGGCTTTTCTACCTGGTATTCTTAG 58.110 40.000 7.07 0.00 34.07 2.18
1707 2239 6.886178 AGGCTTTTCTACCTGGTATTCTTA 57.114 37.500 7.07 0.00 34.07 2.10
1708 2240 5.780958 AGGCTTTTCTACCTGGTATTCTT 57.219 39.130 7.07 0.00 34.07 2.52
1709 2241 5.250774 TGAAGGCTTTTCTACCTGGTATTCT 59.749 40.000 7.07 0.00 36.07 2.40
1710 2242 5.497474 TGAAGGCTTTTCTACCTGGTATTC 58.503 41.667 7.07 6.35 36.07 1.75
1711 2243 5.514500 TGAAGGCTTTTCTACCTGGTATT 57.486 39.130 7.07 0.00 36.07 1.89
1712 2244 5.514500 TTGAAGGCTTTTCTACCTGGTAT 57.486 39.130 7.07 0.00 36.07 2.73
1713 2245 4.986054 TTGAAGGCTTTTCTACCTGGTA 57.014 40.909 6.36 6.36 36.07 3.25
1714 2246 3.876309 TTGAAGGCTTTTCTACCTGGT 57.124 42.857 4.05 4.05 36.07 4.00
1715 2247 3.058224 CGTTTGAAGGCTTTTCTACCTGG 60.058 47.826 0.00 0.00 36.07 4.45
1716 2248 3.813166 TCGTTTGAAGGCTTTTCTACCTG 59.187 43.478 0.00 0.00 36.07 4.00
1717 2249 4.065789 CTCGTTTGAAGGCTTTTCTACCT 58.934 43.478 0.00 0.00 38.14 3.08
1718 2250 4.062991 TCTCGTTTGAAGGCTTTTCTACC 58.937 43.478 0.00 0.00 0.00 3.18
1719 2251 5.408604 TCATCTCGTTTGAAGGCTTTTCTAC 59.591 40.000 0.00 0.00 0.00 2.59
1720 2252 5.408604 GTCATCTCGTTTGAAGGCTTTTCTA 59.591 40.000 0.00 0.00 0.00 2.10
1721 2253 4.214332 GTCATCTCGTTTGAAGGCTTTTCT 59.786 41.667 0.00 0.00 0.00 2.52
1722 2254 4.214332 AGTCATCTCGTTTGAAGGCTTTTC 59.786 41.667 0.00 0.00 0.00 2.29
1723 2255 4.137543 AGTCATCTCGTTTGAAGGCTTTT 58.862 39.130 0.00 0.00 0.00 2.27
1724 2256 3.744660 AGTCATCTCGTTTGAAGGCTTT 58.255 40.909 0.00 0.00 0.00 3.51
1725 2257 3.330267 GAGTCATCTCGTTTGAAGGCTT 58.670 45.455 0.00 0.00 0.00 4.35
1726 2258 2.354203 GGAGTCATCTCGTTTGAAGGCT 60.354 50.000 0.00 0.00 41.26 4.58
1727 2259 2.003301 GGAGTCATCTCGTTTGAAGGC 58.997 52.381 0.00 0.00 41.26 4.35
1728 2260 3.601443 AGGAGTCATCTCGTTTGAAGG 57.399 47.619 0.00 0.00 41.26 3.46
1765 2297 9.203421 CGATCAGCTTTTGTAATGTGGTATATA 57.797 33.333 0.00 0.00 0.00 0.86
1766 2298 7.307989 GCGATCAGCTTTTGTAATGTGGTATAT 60.308 37.037 0.00 0.00 44.04 0.86
1767 2299 6.018262 GCGATCAGCTTTTGTAATGTGGTATA 60.018 38.462 0.00 0.00 44.04 1.47
1768 2300 5.220854 GCGATCAGCTTTTGTAATGTGGTAT 60.221 40.000 0.00 0.00 44.04 2.73
1769 2301 4.094294 GCGATCAGCTTTTGTAATGTGGTA 59.906 41.667 0.00 0.00 44.04 3.25
1770 2302 3.119849 GCGATCAGCTTTTGTAATGTGGT 60.120 43.478 0.00 0.00 44.04 4.16
1771 2303 3.429085 GCGATCAGCTTTTGTAATGTGG 58.571 45.455 0.00 0.00 44.04 4.17
1791 2323 3.861276 AAAGGTAACGCAATTTAGGGC 57.139 42.857 0.00 0.00 46.39 5.19
1792 2324 4.673320 CGGAAAAGGTAACGCAATTTAGGG 60.673 45.833 0.00 0.00 46.39 3.53
1793 2325 4.154556 TCGGAAAAGGTAACGCAATTTAGG 59.845 41.667 0.00 0.00 46.39 2.69
1794 2326 5.285798 TCGGAAAAGGTAACGCAATTTAG 57.714 39.130 0.00 0.00 46.39 1.85
1795 2327 4.154556 CCTCGGAAAAGGTAACGCAATTTA 59.845 41.667 0.00 0.00 46.39 1.40
1796 2328 3.057806 CCTCGGAAAAGGTAACGCAATTT 60.058 43.478 0.00 0.00 46.39 1.82
1797 2329 2.486592 CCTCGGAAAAGGTAACGCAATT 59.513 45.455 0.00 0.00 46.39 2.32
1798 2330 2.081462 CCTCGGAAAAGGTAACGCAAT 58.919 47.619 0.00 0.00 46.39 3.56
1799 2331 1.070445 TCCTCGGAAAAGGTAACGCAA 59.930 47.619 0.00 0.00 46.39 4.85
1800 2332 0.680618 TCCTCGGAAAAGGTAACGCA 59.319 50.000 0.00 0.00 46.39 5.24
1801 2333 1.799544 TTCCTCGGAAAAGGTAACGC 58.200 50.000 0.00 0.00 46.39 4.84
1802 2334 5.163824 GGTTAATTCCTCGGAAAAGGTAACG 60.164 44.000 2.00 0.00 38.77 3.18
1803 2335 5.942236 AGGTTAATTCCTCGGAAAAGGTAAC 59.058 40.000 2.00 8.71 37.69 2.50
1804 2336 6.130692 AGGTTAATTCCTCGGAAAAGGTAA 57.869 37.500 2.00 0.00 37.69 2.85
1805 2337 5.767277 AGGTTAATTCCTCGGAAAAGGTA 57.233 39.130 2.00 0.00 37.69 3.08
1806 2338 4.652679 AGGTTAATTCCTCGGAAAAGGT 57.347 40.909 2.00 0.00 37.69 3.50
1807 2339 5.336451 CCAAAGGTTAATTCCTCGGAAAAGG 60.336 44.000 2.00 0.00 37.69 3.11
1808 2340 5.336451 CCCAAAGGTTAATTCCTCGGAAAAG 60.336 44.000 2.00 0.00 37.69 2.27
1809 2341 4.525100 CCCAAAGGTTAATTCCTCGGAAAA 59.475 41.667 2.00 0.00 37.69 2.29
1810 2342 4.083565 CCCAAAGGTTAATTCCTCGGAAA 58.916 43.478 2.00 0.00 37.69 3.13
1811 2343 3.331294 TCCCAAAGGTTAATTCCTCGGAA 59.669 43.478 0.11 0.11 36.74 4.30
1812 2344 2.914278 TCCCAAAGGTTAATTCCTCGGA 59.086 45.455 4.10 0.23 36.74 4.55
1813 2345 3.359695 TCCCAAAGGTTAATTCCTCGG 57.640 47.619 0.00 0.00 36.74 4.63
1814 2346 4.523083 TGATCCCAAAGGTTAATTCCTCG 58.477 43.478 0.00 0.00 36.74 4.63
1815 2347 6.039829 GTGATGATCCCAAAGGTTAATTCCTC 59.960 42.308 0.00 0.00 36.74 3.71
1816 2348 5.893824 GTGATGATCCCAAAGGTTAATTCCT 59.106 40.000 0.00 0.00 39.84 3.36
1817 2349 5.656416 TGTGATGATCCCAAAGGTTAATTCC 59.344 40.000 0.00 0.00 0.00 3.01
1818 2350 6.773976 TGTGATGATCCCAAAGGTTAATTC 57.226 37.500 0.00 0.00 0.00 2.17
1819 2351 7.416664 CGATTGTGATGATCCCAAAGGTTAATT 60.417 37.037 0.00 0.00 0.00 1.40
1820 2352 6.039717 CGATTGTGATGATCCCAAAGGTTAAT 59.960 38.462 0.00 0.00 0.00 1.40
1821 2353 5.356751 CGATTGTGATGATCCCAAAGGTTAA 59.643 40.000 0.00 0.00 0.00 2.01
1822 2354 4.881273 CGATTGTGATGATCCCAAAGGTTA 59.119 41.667 0.00 0.00 0.00 2.85
1823 2355 3.696051 CGATTGTGATGATCCCAAAGGTT 59.304 43.478 0.00 0.00 0.00 3.50
1824 2356 3.282021 CGATTGTGATGATCCCAAAGGT 58.718 45.455 0.00 0.00 0.00 3.50
1825 2357 3.282021 ACGATTGTGATGATCCCAAAGG 58.718 45.455 0.00 0.00 0.00 3.11
1826 2358 4.156556 ACAACGATTGTGATGATCCCAAAG 59.843 41.667 0.00 0.00 43.48 2.77
1827 2359 4.078537 ACAACGATTGTGATGATCCCAAA 58.921 39.130 0.00 0.00 43.48 3.28
1828 2360 3.684908 ACAACGATTGTGATGATCCCAA 58.315 40.909 0.00 0.00 43.48 4.12
1829 2361 3.348647 ACAACGATTGTGATGATCCCA 57.651 42.857 0.00 0.00 43.48 4.37
1848 2380 0.804989 CCTTCTCGTTGGAATGGCAC 59.195 55.000 0.00 0.00 0.00 5.01
1849 2381 0.690192 TCCTTCTCGTTGGAATGGCA 59.310 50.000 0.00 0.00 0.00 4.92
1850 2382 1.821216 TTCCTTCTCGTTGGAATGGC 58.179 50.000 0.00 0.00 37.42 4.40
1854 2386 5.808540 CGTGTATTATTCCTTCTCGTTGGAA 59.191 40.000 0.00 0.00 45.11 3.53
1855 2387 5.105635 ACGTGTATTATTCCTTCTCGTTGGA 60.106 40.000 0.00 0.00 0.00 3.53
1856 2388 5.107133 ACGTGTATTATTCCTTCTCGTTGG 58.893 41.667 0.00 0.00 0.00 3.77
1857 2389 6.642683 AACGTGTATTATTCCTTCTCGTTG 57.357 37.500 0.00 0.00 37.04 4.10
1858 2390 8.650714 GTTAAACGTGTATTATTCCTTCTCGTT 58.349 33.333 0.00 0.00 38.93 3.85
1859 2391 8.031277 AGTTAAACGTGTATTATTCCTTCTCGT 58.969 33.333 0.00 0.00 0.00 4.18
1860 2392 8.318876 CAGTTAAACGTGTATTATTCCTTCTCG 58.681 37.037 0.00 0.00 0.00 4.04
1861 2393 8.114905 GCAGTTAAACGTGTATTATTCCTTCTC 58.885 37.037 0.00 0.00 0.00 2.87
1862 2394 7.822822 AGCAGTTAAACGTGTATTATTCCTTCT 59.177 33.333 0.00 0.00 0.00 2.85
1863 2395 7.971455 AGCAGTTAAACGTGTATTATTCCTTC 58.029 34.615 0.00 0.00 0.00 3.46
1864 2396 7.916914 AGCAGTTAAACGTGTATTATTCCTT 57.083 32.000 0.00 0.00 0.00 3.36
1865 2397 7.625606 GCAAGCAGTTAAACGTGTATTATTCCT 60.626 37.037 0.00 0.00 0.00 3.36
1866 2398 6.468000 GCAAGCAGTTAAACGTGTATTATTCC 59.532 38.462 0.00 0.00 0.00 3.01
1867 2399 7.018826 TGCAAGCAGTTAAACGTGTATTATTC 58.981 34.615 0.00 0.00 0.00 1.75
1868 2400 6.904498 TGCAAGCAGTTAAACGTGTATTATT 58.096 32.000 0.00 0.00 0.00 1.40
1869 2401 6.489127 TGCAAGCAGTTAAACGTGTATTAT 57.511 33.333 0.00 0.00 0.00 1.28
1870 2402 5.926214 TGCAAGCAGTTAAACGTGTATTA 57.074 34.783 0.00 0.00 0.00 0.98
1871 2403 4.822036 TGCAAGCAGTTAAACGTGTATT 57.178 36.364 0.00 0.00 0.00 1.89
1872 2404 4.513692 TCTTGCAAGCAGTTAAACGTGTAT 59.486 37.500 21.99 0.00 0.00 2.29
1873 2405 3.872182 TCTTGCAAGCAGTTAAACGTGTA 59.128 39.130 21.99 0.00 0.00 2.90
1874 2406 2.680841 TCTTGCAAGCAGTTAAACGTGT 59.319 40.909 21.99 0.00 0.00 4.49
1875 2407 3.035942 GTCTTGCAAGCAGTTAAACGTG 58.964 45.455 21.99 0.00 0.00 4.49
1876 2408 2.032924 GGTCTTGCAAGCAGTTAAACGT 59.967 45.455 21.99 0.00 0.00 3.99
1877 2409 2.604614 GGGTCTTGCAAGCAGTTAAACG 60.605 50.000 21.99 0.00 0.00 3.60
1878 2410 2.288213 GGGGTCTTGCAAGCAGTTAAAC 60.288 50.000 21.99 12.15 0.00 2.01
1879 2411 1.960689 GGGGTCTTGCAAGCAGTTAAA 59.039 47.619 21.99 0.00 0.00 1.52
1880 2412 1.616159 GGGGTCTTGCAAGCAGTTAA 58.384 50.000 21.99 0.00 0.00 2.01
1881 2413 0.251165 GGGGGTCTTGCAAGCAGTTA 60.251 55.000 21.99 0.56 0.00 2.24
1882 2414 1.531602 GGGGGTCTTGCAAGCAGTT 60.532 57.895 21.99 0.00 0.00 3.16
1883 2415 2.116125 GGGGGTCTTGCAAGCAGT 59.884 61.111 21.99 0.00 0.00 4.40
1884 2416 1.676967 GAGGGGGTCTTGCAAGCAG 60.677 63.158 21.99 0.00 0.00 4.24
1885 2417 2.005606 TTGAGGGGGTCTTGCAAGCA 62.006 55.000 21.99 8.98 0.00 3.91
1886 2418 0.613012 ATTGAGGGGGTCTTGCAAGC 60.613 55.000 21.99 15.82 0.00 4.01
1887 2419 1.272092 TGATTGAGGGGGTCTTGCAAG 60.272 52.381 20.81 20.81 0.00 4.01
1888 2420 0.776810 TGATTGAGGGGGTCTTGCAA 59.223 50.000 0.00 0.00 0.00 4.08
1889 2421 0.776810 TTGATTGAGGGGGTCTTGCA 59.223 50.000 0.00 0.00 0.00 4.08
1890 2422 1.923356 TTTGATTGAGGGGGTCTTGC 58.077 50.000 0.00 0.00 0.00 4.01
1891 2423 2.762327 CCATTTGATTGAGGGGGTCTTG 59.238 50.000 0.00 0.00 0.00 3.02
1892 2424 2.383338 ACCATTTGATTGAGGGGGTCTT 59.617 45.455 0.00 0.00 0.00 3.01
1893 2425 2.003072 ACCATTTGATTGAGGGGGTCT 58.997 47.619 0.00 0.00 0.00 3.85
1894 2426 2.379005 GACCATTTGATTGAGGGGGTC 58.621 52.381 0.00 0.00 36.86 4.46
1895 2427 1.007118 GGACCATTTGATTGAGGGGGT 59.993 52.381 0.00 0.00 0.00 4.95
1896 2428 1.689258 GGGACCATTTGATTGAGGGGG 60.689 57.143 0.00 0.00 0.00 5.40
1897 2429 1.780503 GGGACCATTTGATTGAGGGG 58.219 55.000 0.00 0.00 0.00 4.79
1913 2445 3.141272 ACTTTTTGGTCCATGTTAGGGGA 59.859 43.478 0.00 0.00 0.00 4.81
1914 2446 3.506398 ACTTTTTGGTCCATGTTAGGGG 58.494 45.455 0.00 0.00 0.00 4.79
1915 2447 5.545063 AAACTTTTTGGTCCATGTTAGGG 57.455 39.130 0.00 0.00 0.00 3.53
1916 2448 7.493367 TGTAAAACTTTTTGGTCCATGTTAGG 58.507 34.615 0.00 0.00 0.00 2.69
1917 2449 8.934507 TTGTAAAACTTTTTGGTCCATGTTAG 57.065 30.769 0.00 0.00 0.00 2.34
1918 2450 9.720769 TTTTGTAAAACTTTTTGGTCCATGTTA 57.279 25.926 0.00 0.00 0.00 2.41
1919 2451 8.622948 TTTTGTAAAACTTTTTGGTCCATGTT 57.377 26.923 0.00 0.00 0.00 2.71
1920 2452 8.622948 TTTTTGTAAAACTTTTTGGTCCATGT 57.377 26.923 0.00 0.00 0.00 3.21
1942 2474 4.082245 CCAGATGGGCTTCACGTTATTTTT 60.082 41.667 0.00 0.00 0.00 1.94
1943 2475 3.443681 CCAGATGGGCTTCACGTTATTTT 59.556 43.478 0.00 0.00 0.00 1.82
1944 2476 3.016736 CCAGATGGGCTTCACGTTATTT 58.983 45.455 0.00 0.00 0.00 1.40
1945 2477 2.026262 ACCAGATGGGCTTCACGTTATT 60.026 45.455 3.48 0.00 42.05 1.40
1946 2478 1.559682 ACCAGATGGGCTTCACGTTAT 59.440 47.619 3.48 0.00 42.05 1.89
1947 2479 0.981183 ACCAGATGGGCTTCACGTTA 59.019 50.000 3.48 0.00 42.05 3.18
1948 2480 0.321653 GACCAGATGGGCTTCACGTT 60.322 55.000 3.48 0.00 41.12 3.99
1949 2481 1.296715 GACCAGATGGGCTTCACGT 59.703 57.895 3.48 0.00 41.12 4.49
1950 2482 1.450312 GGACCAGATGGGCTTCACG 60.450 63.158 4.35 0.00 44.77 4.35
1951 2483 1.077429 GGGACCAGATGGGCTTCAC 60.077 63.158 4.35 0.00 44.77 3.18
1952 2484 2.669133 CGGGACCAGATGGGCTTCA 61.669 63.158 4.35 0.00 44.77 3.02
1953 2485 2.190578 CGGGACCAGATGGGCTTC 59.809 66.667 4.35 0.00 44.77 3.86
1954 2486 3.411517 CCGGGACCAGATGGGCTT 61.412 66.667 4.35 0.00 44.77 4.35
1959 2491 2.499303 AAAAGCCCCGGGACCAGATG 62.499 60.000 26.32 3.67 0.00 2.90
1960 2492 0.917333 TAAAAGCCCCGGGACCAGAT 60.917 55.000 26.32 0.00 0.00 2.90
1961 2493 1.135068 TTAAAAGCCCCGGGACCAGA 61.135 55.000 26.32 0.00 0.00 3.86
1962 2494 0.251430 TTTAAAAGCCCCGGGACCAG 60.251 55.000 26.32 5.97 0.00 4.00
1963 2495 0.410270 ATTTAAAAGCCCCGGGACCA 59.590 50.000 26.32 0.00 0.00 4.02
1964 2496 1.108776 GATTTAAAAGCCCCGGGACC 58.891 55.000 26.32 13.12 0.00 4.46
1965 2497 1.475280 GTGATTTAAAAGCCCCGGGAC 59.525 52.381 26.32 11.88 0.00 4.46
1966 2498 1.617533 GGTGATTTAAAAGCCCCGGGA 60.618 52.381 26.32 0.00 0.00 5.14
1967 2499 0.821517 GGTGATTTAAAAGCCCCGGG 59.178 55.000 15.80 15.80 0.00 5.73
1968 2500 1.551452 TGGTGATTTAAAAGCCCCGG 58.449 50.000 0.00 0.00 0.00 5.73
1969 2501 3.885724 ATTGGTGATTTAAAAGCCCCG 57.114 42.857 0.00 0.00 0.00 5.73
1970 2502 6.478512 TGATATTGGTGATTTAAAAGCCCC 57.521 37.500 0.00 0.00 0.00 5.80
1971 2503 7.821846 TGTTTGATATTGGTGATTTAAAAGCCC 59.178 33.333 0.00 0.00 0.00 5.19
1972 2504 8.770438 TGTTTGATATTGGTGATTTAAAAGCC 57.230 30.769 0.00 0.00 0.00 4.35
1981 2513 9.295825 TGTAAGACTTTGTTTGATATTGGTGAT 57.704 29.630 0.00 0.00 0.00 3.06
1982 2514 8.684386 TGTAAGACTTTGTTTGATATTGGTGA 57.316 30.769 0.00 0.00 0.00 4.02
1983 2515 9.743057 TTTGTAAGACTTTGTTTGATATTGGTG 57.257 29.630 0.00 0.00 0.00 4.17
1984 2516 9.744468 GTTTGTAAGACTTTGTTTGATATTGGT 57.256 29.630 0.00 0.00 0.00 3.67
1985 2517 9.743057 TGTTTGTAAGACTTTGTTTGATATTGG 57.257 29.630 0.00 0.00 0.00 3.16
1990 2522 9.520204 CAAGATGTTTGTAAGACTTTGTTTGAT 57.480 29.630 0.00 0.00 0.00 2.57
1991 2523 8.735315 TCAAGATGTTTGTAAGACTTTGTTTGA 58.265 29.630 0.00 0.00 0.00 2.69
1992 2524 8.909708 TCAAGATGTTTGTAAGACTTTGTTTG 57.090 30.769 0.00 0.00 0.00 2.93
1993 2525 7.702348 GCTCAAGATGTTTGTAAGACTTTGTTT 59.298 33.333 0.00 0.00 0.00 2.83
1994 2526 7.148086 TGCTCAAGATGTTTGTAAGACTTTGTT 60.148 33.333 0.00 0.00 0.00 2.83
1995 2527 6.318648 TGCTCAAGATGTTTGTAAGACTTTGT 59.681 34.615 0.00 0.00 0.00 2.83
1996 2528 6.728200 TGCTCAAGATGTTTGTAAGACTTTG 58.272 36.000 0.00 0.00 0.00 2.77
1997 2529 6.942532 TGCTCAAGATGTTTGTAAGACTTT 57.057 33.333 0.00 0.00 0.00 2.66
1998 2530 6.942532 TTGCTCAAGATGTTTGTAAGACTT 57.057 33.333 0.00 0.00 0.00 3.01
1999 2531 8.798859 ATATTGCTCAAGATGTTTGTAAGACT 57.201 30.769 0.00 0.00 0.00 3.24
2005 2537 8.186821 GCTTCTTATATTGCTCAAGATGTTTGT 58.813 33.333 0.45 0.00 0.00 2.83
2006 2538 8.186163 TGCTTCTTATATTGCTCAAGATGTTTG 58.814 33.333 0.45 0.00 0.00 2.93
2007 2539 8.284945 TGCTTCTTATATTGCTCAAGATGTTT 57.715 30.769 0.45 0.00 0.00 2.83
2008 2540 7.870509 TGCTTCTTATATTGCTCAAGATGTT 57.129 32.000 0.45 0.00 0.00 2.71
2009 2541 7.772292 TCTTGCTTCTTATATTGCTCAAGATGT 59.228 33.333 0.45 0.00 35.28 3.06
2010 2542 8.151141 TCTTGCTTCTTATATTGCTCAAGATG 57.849 34.615 0.45 0.00 35.28 2.90
2011 2543 8.743085 TTCTTGCTTCTTATATTGCTCAAGAT 57.257 30.769 0.00 0.00 38.56 2.40
2012 2544 7.281774 CCTTCTTGCTTCTTATATTGCTCAAGA 59.718 37.037 0.00 0.00 37.49 3.02
2013 2545 7.416022 CCTTCTTGCTTCTTATATTGCTCAAG 58.584 38.462 0.00 0.00 0.00 3.02
2014 2546 6.319658 CCCTTCTTGCTTCTTATATTGCTCAA 59.680 38.462 0.00 0.00 0.00 3.02
2015 2547 5.824624 CCCTTCTTGCTTCTTATATTGCTCA 59.175 40.000 0.00 0.00 0.00 4.26
2016 2548 5.278218 GCCCTTCTTGCTTCTTATATTGCTC 60.278 44.000 0.00 0.00 0.00 4.26
2017 2549 4.582240 GCCCTTCTTGCTTCTTATATTGCT 59.418 41.667 0.00 0.00 0.00 3.91
2018 2550 4.339247 TGCCCTTCTTGCTTCTTATATTGC 59.661 41.667 0.00 0.00 0.00 3.56
2019 2551 6.645790 ATGCCCTTCTTGCTTCTTATATTG 57.354 37.500 0.00 0.00 0.00 1.90
2020 2552 6.608808 ACAATGCCCTTCTTGCTTCTTATATT 59.391 34.615 0.00 0.00 0.00 1.28
2021 2553 6.131961 ACAATGCCCTTCTTGCTTCTTATAT 58.868 36.000 0.00 0.00 0.00 0.86
2022 2554 5.509498 ACAATGCCCTTCTTGCTTCTTATA 58.491 37.500 0.00 0.00 0.00 0.98
2023 2555 4.347607 ACAATGCCCTTCTTGCTTCTTAT 58.652 39.130 0.00 0.00 0.00 1.73
2024 2556 3.766545 ACAATGCCCTTCTTGCTTCTTA 58.233 40.909 0.00 0.00 0.00 2.10
2025 2557 2.601905 ACAATGCCCTTCTTGCTTCTT 58.398 42.857 0.00 0.00 0.00 2.52
2026 2558 2.299326 ACAATGCCCTTCTTGCTTCT 57.701 45.000 0.00 0.00 0.00 2.85
2027 2559 2.297033 TGAACAATGCCCTTCTTGCTTC 59.703 45.455 0.00 0.00 0.00 3.86
2028 2560 2.318908 TGAACAATGCCCTTCTTGCTT 58.681 42.857 0.00 0.00 0.00 3.91
2029 2561 1.999648 TGAACAATGCCCTTCTTGCT 58.000 45.000 0.00 0.00 0.00 3.91
2030 2562 2.494870 AGATGAACAATGCCCTTCTTGC 59.505 45.455 0.00 0.00 0.00 4.01
2031 2563 5.416952 ACTTAGATGAACAATGCCCTTCTTG 59.583 40.000 0.00 0.00 0.00 3.02
2032 2564 5.416952 CACTTAGATGAACAATGCCCTTCTT 59.583 40.000 0.00 0.00 0.00 2.52
2033 2565 4.946157 CACTTAGATGAACAATGCCCTTCT 59.054 41.667 0.00 0.00 0.00 2.85
2034 2566 4.096984 CCACTTAGATGAACAATGCCCTTC 59.903 45.833 0.00 0.00 0.00 3.46
2035 2567 4.019174 CCACTTAGATGAACAATGCCCTT 58.981 43.478 0.00 0.00 0.00 3.95
2036 2568 3.266772 TCCACTTAGATGAACAATGCCCT 59.733 43.478 0.00 0.00 0.00 5.19
2037 2569 3.378427 GTCCACTTAGATGAACAATGCCC 59.622 47.826 0.00 0.00 0.00 5.36
2038 2570 4.009675 TGTCCACTTAGATGAACAATGCC 58.990 43.478 0.00 0.00 0.00 4.40
2039 2571 5.824904 ATGTCCACTTAGATGAACAATGC 57.175 39.130 0.00 0.00 0.00 3.56
2040 2572 7.621428 AGAATGTCCACTTAGATGAACAATG 57.379 36.000 0.00 0.00 0.00 2.82
2041 2573 8.105829 AGAAGAATGTCCACTTAGATGAACAAT 58.894 33.333 0.00 0.00 0.00 2.71
2042 2574 7.388776 CAGAAGAATGTCCACTTAGATGAACAA 59.611 37.037 0.00 0.00 0.00 2.83
2043 2575 6.875726 CAGAAGAATGTCCACTTAGATGAACA 59.124 38.462 0.00 0.00 0.00 3.18
2044 2576 6.183360 GCAGAAGAATGTCCACTTAGATGAAC 60.183 42.308 0.00 0.00 0.00 3.18
2045 2577 5.877012 GCAGAAGAATGTCCACTTAGATGAA 59.123 40.000 0.00 0.00 0.00 2.57
2046 2578 5.423015 GCAGAAGAATGTCCACTTAGATGA 58.577 41.667 0.00 0.00 0.00 2.92
2047 2579 4.269603 CGCAGAAGAATGTCCACTTAGATG 59.730 45.833 0.00 0.00 0.00 2.90
2048 2580 4.437239 CGCAGAAGAATGTCCACTTAGAT 58.563 43.478 0.00 0.00 0.00 1.98
2049 2581 3.368427 CCGCAGAAGAATGTCCACTTAGA 60.368 47.826 0.00 0.00 0.00 2.10
2050 2582 2.932614 CCGCAGAAGAATGTCCACTTAG 59.067 50.000 0.00 0.00 0.00 2.18
2051 2583 2.565391 TCCGCAGAAGAATGTCCACTTA 59.435 45.455 0.00 0.00 0.00 2.24
2052 2584 1.347707 TCCGCAGAAGAATGTCCACTT 59.652 47.619 0.00 0.00 0.00 3.16
2053 2585 0.976641 TCCGCAGAAGAATGTCCACT 59.023 50.000 0.00 0.00 0.00 4.00
2054 2586 1.079503 GTCCGCAGAAGAATGTCCAC 58.920 55.000 0.00 0.00 0.00 4.02
2055 2587 0.684535 TGTCCGCAGAAGAATGTCCA 59.315 50.000 0.00 0.00 0.00 4.02
2056 2588 1.734465 CTTGTCCGCAGAAGAATGTCC 59.266 52.381 0.00 0.00 0.00 4.02
2057 2589 1.734465 CCTTGTCCGCAGAAGAATGTC 59.266 52.381 0.00 0.00 0.00 3.06
2058 2590 1.611673 CCCTTGTCCGCAGAAGAATGT 60.612 52.381 0.00 0.00 0.00 2.71
2059 2591 1.089920 CCCTTGTCCGCAGAAGAATG 58.910 55.000 0.00 0.00 0.00 2.67
2060 2592 0.984230 TCCCTTGTCCGCAGAAGAAT 59.016 50.000 0.00 0.00 0.00 2.40
2061 2593 0.984230 ATCCCTTGTCCGCAGAAGAA 59.016 50.000 0.00 0.00 0.00 2.52
2062 2594 1.860641 TATCCCTTGTCCGCAGAAGA 58.139 50.000 0.00 0.00 0.00 2.87
2063 2595 2.691409 TTATCCCTTGTCCGCAGAAG 57.309 50.000 0.00 0.00 0.00 2.85
2064 2596 3.078837 GTTTTATCCCTTGTCCGCAGAA 58.921 45.455 0.00 0.00 0.00 3.02
2065 2597 2.617021 GGTTTTATCCCTTGTCCGCAGA 60.617 50.000 0.00 0.00 0.00 4.26
2066 2598 1.743394 GGTTTTATCCCTTGTCCGCAG 59.257 52.381 0.00 0.00 0.00 5.18
2067 2599 1.353022 AGGTTTTATCCCTTGTCCGCA 59.647 47.619 0.00 0.00 0.00 5.69
2068 2600 1.743394 CAGGTTTTATCCCTTGTCCGC 59.257 52.381 0.00 0.00 0.00 5.54
2069 2601 1.743394 GCAGGTTTTATCCCTTGTCCG 59.257 52.381 0.00 0.00 0.00 4.79
2070 2602 2.755103 CAGCAGGTTTTATCCCTTGTCC 59.245 50.000 0.00 0.00 0.00 4.02
2071 2603 2.755103 CCAGCAGGTTTTATCCCTTGTC 59.245 50.000 0.00 0.00 0.00 3.18
2072 2604 2.807676 CCAGCAGGTTTTATCCCTTGT 58.192 47.619 0.00 0.00 0.00 3.16
2085 2617 1.327303 TTTGCAACCTAACCAGCAGG 58.673 50.000 0.00 0.00 38.35 4.85
2086 2618 2.362077 AGTTTTGCAACCTAACCAGCAG 59.638 45.455 0.00 0.00 38.35 4.24
2087 2619 2.383855 AGTTTTGCAACCTAACCAGCA 58.616 42.857 0.00 0.00 32.70 4.41
2088 2620 3.068165 AGAAGTTTTGCAACCTAACCAGC 59.932 43.478 0.00 0.00 32.70 4.85
2089 2621 4.338118 TCAGAAGTTTTGCAACCTAACCAG 59.662 41.667 0.00 0.00 32.70 4.00
2090 2622 4.274147 TCAGAAGTTTTGCAACCTAACCA 58.726 39.130 0.00 0.00 32.70 3.67
2091 2623 4.261614 CCTCAGAAGTTTTGCAACCTAACC 60.262 45.833 0.00 0.00 32.70 2.85
2092 2624 4.338400 ACCTCAGAAGTTTTGCAACCTAAC 59.662 41.667 0.00 0.79 32.70 2.34
2093 2625 4.338118 CACCTCAGAAGTTTTGCAACCTAA 59.662 41.667 0.00 0.00 32.70 2.69
2094 2626 3.882888 CACCTCAGAAGTTTTGCAACCTA 59.117 43.478 0.00 0.00 32.70 3.08
2095 2627 2.689983 CACCTCAGAAGTTTTGCAACCT 59.310 45.455 0.00 0.00 32.70 3.50
2096 2628 2.687935 TCACCTCAGAAGTTTTGCAACC 59.312 45.455 0.00 0.00 32.70 3.77
2097 2629 4.370364 TTCACCTCAGAAGTTTTGCAAC 57.630 40.909 0.00 0.00 0.00 4.17
2098 2630 5.596836 ATTTCACCTCAGAAGTTTTGCAA 57.403 34.783 0.00 0.00 0.00 4.08
2099 2631 6.899393 ATATTTCACCTCAGAAGTTTTGCA 57.101 33.333 0.00 0.00 0.00 4.08
2100 2632 8.730680 TCTAATATTTCACCTCAGAAGTTTTGC 58.269 33.333 0.00 0.00 0.00 3.68
2130 2662 9.941325 GAGTTGAAGGATCATATCACAGAATAT 57.059 33.333 0.00 0.00 34.96 1.28
2131 2663 8.370940 GGAGTTGAAGGATCATATCACAGAATA 58.629 37.037 0.00 0.00 34.96 1.75
2132 2664 7.147426 TGGAGTTGAAGGATCATATCACAGAAT 60.147 37.037 0.00 0.00 34.96 2.40
2133 2665 6.156775 TGGAGTTGAAGGATCATATCACAGAA 59.843 38.462 0.00 0.00 34.96 3.02
2134 2666 5.662657 TGGAGTTGAAGGATCATATCACAGA 59.337 40.000 0.00 0.00 34.96 3.41
2135 2667 5.922053 TGGAGTTGAAGGATCATATCACAG 58.078 41.667 0.00 0.00 34.96 3.66
2136 2668 5.955961 TGGAGTTGAAGGATCATATCACA 57.044 39.130 0.00 0.00 34.96 3.58
2137 2669 6.593382 GCTATGGAGTTGAAGGATCATATCAC 59.407 42.308 0.00 0.00 34.96 3.06
2138 2670 6.499699 AGCTATGGAGTTGAAGGATCATATCA 59.500 38.462 0.00 0.00 34.96 2.15
2139 2671 6.945218 AGCTATGGAGTTGAAGGATCATATC 58.055 40.000 0.00 0.00 34.96 1.63
2140 2672 6.949117 AGCTATGGAGTTGAAGGATCATAT 57.051 37.500 0.00 0.00 34.96 1.78
2141 2673 6.528321 CAAGCTATGGAGTTGAAGGATCATA 58.472 40.000 0.00 0.00 34.96 2.15
2142 2674 5.374921 CAAGCTATGGAGTTGAAGGATCAT 58.625 41.667 0.00 0.00 34.96 2.45
2143 2675 4.774124 CAAGCTATGGAGTTGAAGGATCA 58.226 43.478 0.00 0.00 0.00 2.92
2144 2676 3.563390 GCAAGCTATGGAGTTGAAGGATC 59.437 47.826 0.00 0.00 0.00 3.36
2145 2677 3.549794 GCAAGCTATGGAGTTGAAGGAT 58.450 45.455 0.00 0.00 0.00 3.24
2146 2678 2.356125 GGCAAGCTATGGAGTTGAAGGA 60.356 50.000 0.00 0.00 0.00 3.36
2147 2679 2.019984 GGCAAGCTATGGAGTTGAAGG 58.980 52.381 0.00 0.00 0.00 3.46
2148 2680 1.667724 CGGCAAGCTATGGAGTTGAAG 59.332 52.381 0.00 0.00 0.00 3.02
2149 2681 1.737838 CGGCAAGCTATGGAGTTGAA 58.262 50.000 0.00 0.00 0.00 2.69
2150 2682 0.744414 GCGGCAAGCTATGGAGTTGA 60.744 55.000 0.00 0.00 44.04 3.18
2151 2683 1.723870 GCGGCAAGCTATGGAGTTG 59.276 57.895 0.00 0.00 44.04 3.16
2152 2684 4.225497 GCGGCAAGCTATGGAGTT 57.775 55.556 0.00 0.00 44.04 3.01
2162 2694 3.683937 CAGGGGTTTGGCGGCAAG 61.684 66.667 24.20 8.23 0.00 4.01
2163 2695 3.740495 TTCAGGGGTTTGGCGGCAA 62.740 57.895 21.79 21.79 0.00 4.52
2164 2696 3.521765 ATTCAGGGGTTTGGCGGCA 62.522 57.895 7.97 7.97 0.00 5.69
2165 2697 2.679996 ATTCAGGGGTTTGGCGGC 60.680 61.111 0.00 0.00 0.00 6.53
2166 2698 0.684153 ATGATTCAGGGGTTTGGCGG 60.684 55.000 0.00 0.00 0.00 6.13
2167 2699 0.740737 GATGATTCAGGGGTTTGGCG 59.259 55.000 0.00 0.00 0.00 5.69
2168 2700 1.851304 TGATGATTCAGGGGTTTGGC 58.149 50.000 0.00 0.00 0.00 4.52
2169 2701 2.762327 CCTTGATGATTCAGGGGTTTGG 59.238 50.000 0.00 0.00 43.63 3.28
2170 2702 3.698040 CTCCTTGATGATTCAGGGGTTTG 59.302 47.826 4.54 0.00 46.50 2.93
2171 2703 3.334881 ACTCCTTGATGATTCAGGGGTTT 59.665 43.478 4.54 0.00 46.50 3.27
2172 2704 2.922283 ACTCCTTGATGATTCAGGGGTT 59.078 45.455 4.54 0.00 46.50 4.11
2173 2705 2.566746 ACTCCTTGATGATTCAGGGGT 58.433 47.619 4.54 0.00 46.50 4.95
2174 2706 3.659183 AACTCCTTGATGATTCAGGGG 57.341 47.619 4.54 0.00 46.50 4.79
2176 2708 7.928307 TTAAGAAACTCCTTGATGATTCAGG 57.072 36.000 0.00 0.00 32.27 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.