Multiple sequence alignment - TraesCS3D01G341600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G341600 chr3D 100.000 3899 0 0 1 3899 454744857 454748755 0.000000e+00 7201.0
1 TraesCS3D01G341600 chr3D 87.814 279 26 1 3621 3899 17239047 17238777 1.750000e-83 320.0
2 TraesCS3D01G341600 chr3D 95.783 166 7 0 1 166 378246757 378246592 6.420000e-68 268.0
3 TraesCS3D01G341600 chr3D 96.341 164 5 1 1 163 587946676 587946839 6.420000e-68 268.0
4 TraesCS3D01G341600 chr3A 94.914 3028 90 35 308 3288 596793407 596796417 0.000000e+00 4680.0
5 TraesCS3D01G341600 chr3A 87.647 170 10 2 3463 3621 596796405 596796574 1.850000e-43 187.0
6 TraesCS3D01G341600 chr3A 72.843 394 93 12 1232 1620 690785123 690785507 5.290000e-24 122.0
7 TraesCS3D01G341600 chr3A 91.011 89 6 2 159 246 596793321 596793408 6.840000e-23 119.0
8 TraesCS3D01G341600 chr3B 95.092 2812 84 24 415 3188 597544658 597547453 0.000000e+00 4379.0
9 TraesCS3D01G341600 chr3B 89.000 200 14 5 234 426 597544061 597544259 1.400000e-59 241.0
10 TraesCS3D01G341600 chr3B 90.123 162 11 5 3463 3621 597547506 597547665 5.110000e-49 206.0
11 TraesCS3D01G341600 chr5D 77.536 1104 198 30 1813 2897 244626085 244625013 1.540000e-173 619.0
12 TraesCS3D01G341600 chr5D 85.514 214 31 0 1333 1546 244628172 244627959 1.410000e-54 224.0
13 TraesCS3D01G341600 chr5A 76.909 1087 201 30 1830 2897 328808319 328807264 4.370000e-159 571.0
14 TraesCS3D01G341600 chr5A 85.965 342 44 4 1176 1515 19542029 19541690 2.860000e-96 363.0
15 TraesCS3D01G341600 chr5A 85.047 214 32 0 1333 1546 328810622 328810409 6.560000e-53 219.0
16 TraesCS3D01G341600 chr5B 79.789 663 106 18 2252 2897 278013338 278012687 1.280000e-124 457.0
17 TraesCS3D01G341600 chr5B 95.808 167 7 0 1 167 346616179 346616345 1.790000e-68 270.0
18 TraesCS3D01G341600 chr5B 88.525 183 18 2 3285 3464 452638542 452638360 6.560000e-53 219.0
19 TraesCS3D01G341600 chr5B 82.171 129 19 4 1581 1707 278013884 278013758 1.480000e-19 108.0
20 TraesCS3D01G341600 chr1D 93.907 279 17 0 3621 3899 430955645 430955923 4.660000e-114 422.0
21 TraesCS3D01G341600 chr1D 84.641 306 18 14 3621 3899 463586036 463585733 1.070000e-70 278.0
22 TraesCS3D01G341600 chr7D 93.571 280 17 1 3621 3899 620209888 620210167 2.170000e-112 416.0
23 TraesCS3D01G341600 chr7D 92.265 181 12 2 1 180 107863233 107863054 5.000000e-64 255.0
24 TraesCS3D01G341600 chr7D 74.332 187 36 10 3285 3464 63018436 63018255 6.990000e-08 69.4
25 TraesCS3D01G341600 chr2D 93.571 280 17 1 3620 3899 614304941 614304663 2.170000e-112 416.0
26 TraesCS3D01G341600 chr2D 86.691 278 28 2 3623 3899 288873505 288873774 2.280000e-77 300.0
27 TraesCS3D01G341600 chr2D 95.652 46 1 1 3621 3666 484402545 484402589 5.400000e-09 73.1
28 TraesCS3D01G341600 chr4B 83.508 382 57 6 1176 1554 412108098 412107720 6.200000e-93 351.0
29 TraesCS3D01G341600 chr4A 83.465 381 59 4 1176 1554 139545237 139545615 6.200000e-93 351.0
30 TraesCS3D01G341600 chr4D 82.310 407 66 6 1176 1579 334118730 334118327 8.020000e-92 348.0
31 TraesCS3D01G341600 chr4D 96.450 169 5 1 1 168 374834023 374834191 1.070000e-70 278.0
32 TraesCS3D01G341600 chr4D 100.000 30 0 0 3369 3398 27566364 27566393 5.440000e-04 56.5
33 TraesCS3D01G341600 chr6B 95.783 166 6 1 1 166 636490661 636490825 2.310000e-67 267.0
34 TraesCS3D01G341600 chr6B 96.319 163 5 1 1 162 711343023 711343185 2.310000e-67 267.0
35 TraesCS3D01G341600 chr6B 84.762 105 8 7 3612 3711 674947260 674947361 8.920000e-17 99.0
36 TraesCS3D01G341600 chr7B 95.238 168 7 1 1 168 8886540 8886374 8.310000e-67 265.0
37 TraesCS3D01G341600 chr7B 89.024 82 8 1 3345 3426 254780848 254780928 2.480000e-17 100.0
38 TraesCS3D01G341600 chr2B 94.706 170 8 1 1 169 36413754 36413923 2.990000e-66 263.0
39 TraesCS3D01G341600 chr6D 81.000 100 12 5 3620 3715 242503792 242503888 5.400000e-09 73.1
40 TraesCS3D01G341600 chr6D 78.571 98 14 7 3621 3715 14271592 14271685 1.510000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G341600 chr3D 454744857 454748755 3898 False 7201.000000 7201 100.000000 1 3899 1 chr3D.!!$F1 3898
1 TraesCS3D01G341600 chr3A 596793321 596796574 3253 False 1662.000000 4680 91.190667 159 3621 3 chr3A.!!$F2 3462
2 TraesCS3D01G341600 chr3B 597544061 597547665 3604 False 1608.666667 4379 91.405000 234 3621 3 chr3B.!!$F1 3387
3 TraesCS3D01G341600 chr5D 244625013 244628172 3159 True 421.500000 619 81.525000 1333 2897 2 chr5D.!!$R1 1564
4 TraesCS3D01G341600 chr5A 328807264 328810622 3358 True 395.000000 571 80.978000 1333 2897 2 chr5A.!!$R2 1564
5 TraesCS3D01G341600 chr5B 278012687 278013884 1197 True 282.500000 457 80.980000 1581 2897 2 chr5B.!!$R2 1316

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.0 0.00 4.57 F
1112 1551 0.030369 CGTGATCCTACGTGCTACCC 59.970 60.000 0.00 0.0 39.13 3.69 F
1115 1554 0.032267 GATCCTACGTGCTACCCTGC 59.968 60.000 0.00 0.0 0.00 4.85 F
1749 4175 1.006805 GGCGATCGATGCTGCTAGT 60.007 57.895 21.57 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1117 1556 0.037590 ACGCCATTGCTGGTAGGAAA 59.962 50.000 0.0 0.0 45.10 3.13 R
2226 4655 1.757340 GGGGATCTCGACCTTCCGT 60.757 63.158 0.0 0.0 0.00 4.69 R
2598 5045 2.687200 CCGTGGAGGTGGATGGGA 60.687 66.667 0.0 0.0 34.51 4.37 R
3737 6202 0.036952 CTGACAACCAGGACGCAGAT 60.037 55.000 0.0 0.0 39.23 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.908786 TGAGATATAATTTGGTCTCATTCACC 57.091 34.615 10.50 0.00 41.40 4.02
36 37 8.717717 TGAGATATAATTTGGTCTCATTCACCT 58.282 33.333 10.50 0.00 41.40 4.00
37 38 8.915057 AGATATAATTTGGTCTCATTCACCTG 57.085 34.615 0.00 0.00 34.66 4.00
38 39 7.941238 AGATATAATTTGGTCTCATTCACCTGG 59.059 37.037 0.00 0.00 34.66 4.45
39 40 4.387026 AATTTGGTCTCATTCACCTGGA 57.613 40.909 0.00 0.00 34.66 3.86
40 41 3.874383 TTTGGTCTCATTCACCTGGAA 57.126 42.857 0.00 0.00 40.46 3.53
41 42 3.874383 TTGGTCTCATTCACCTGGAAA 57.126 42.857 0.00 0.00 39.39 3.13
42 43 3.874383 TGGTCTCATTCACCTGGAAAA 57.126 42.857 0.00 0.00 39.39 2.29
43 44 3.486383 TGGTCTCATTCACCTGGAAAAC 58.514 45.455 0.00 0.00 39.39 2.43
44 45 3.117701 TGGTCTCATTCACCTGGAAAACA 60.118 43.478 0.00 0.00 39.39 2.83
45 46 3.888930 GGTCTCATTCACCTGGAAAACAA 59.111 43.478 0.00 0.00 39.39 2.83
46 47 4.340950 GGTCTCATTCACCTGGAAAACAAA 59.659 41.667 0.00 0.00 39.39 2.83
47 48 5.163457 GGTCTCATTCACCTGGAAAACAAAA 60.163 40.000 0.00 0.00 39.39 2.44
48 49 6.337356 GTCTCATTCACCTGGAAAACAAAAA 58.663 36.000 0.00 0.00 39.39 1.94
49 50 6.255670 GTCTCATTCACCTGGAAAACAAAAAC 59.744 38.462 0.00 0.00 39.39 2.43
50 51 6.042638 TCATTCACCTGGAAAACAAAAACA 57.957 33.333 0.00 0.00 39.39 2.83
51 52 6.105333 TCATTCACCTGGAAAACAAAAACAG 58.895 36.000 0.00 0.00 39.39 3.16
52 53 5.730296 TTCACCTGGAAAACAAAAACAGA 57.270 34.783 0.00 0.00 30.98 3.41
53 54 5.930837 TCACCTGGAAAACAAAAACAGAT 57.069 34.783 0.00 0.00 0.00 2.90
54 55 7.411486 TTCACCTGGAAAACAAAAACAGATA 57.589 32.000 0.00 0.00 30.98 1.98
55 56 6.801575 TCACCTGGAAAACAAAAACAGATAC 58.198 36.000 0.00 0.00 0.00 2.24
56 57 6.378564 TCACCTGGAAAACAAAAACAGATACA 59.621 34.615 0.00 0.00 0.00 2.29
57 58 7.038659 CACCTGGAAAACAAAAACAGATACAA 58.961 34.615 0.00 0.00 0.00 2.41
58 59 7.010091 CACCTGGAAAACAAAAACAGATACAAC 59.990 37.037 0.00 0.00 0.00 3.32
59 60 6.478673 CCTGGAAAACAAAAACAGATACAACC 59.521 38.462 0.00 0.00 0.00 3.77
60 61 6.342111 TGGAAAACAAAAACAGATACAACCC 58.658 36.000 0.00 0.00 0.00 4.11
61 62 6.070767 TGGAAAACAAAAACAGATACAACCCA 60.071 34.615 0.00 0.00 0.00 4.51
62 63 6.256975 GGAAAACAAAAACAGATACAACCCAC 59.743 38.462 0.00 0.00 0.00 4.61
63 64 4.561735 ACAAAAACAGATACAACCCACG 57.438 40.909 0.00 0.00 0.00 4.94
64 65 3.949113 ACAAAAACAGATACAACCCACGT 59.051 39.130 0.00 0.00 0.00 4.49
65 66 4.035909 ACAAAAACAGATACAACCCACGTC 59.964 41.667 0.00 0.00 0.00 4.34
66 67 3.478857 AAACAGATACAACCCACGTCA 57.521 42.857 0.00 0.00 0.00 4.35
67 68 2.743636 ACAGATACAACCCACGTCAG 57.256 50.000 0.00 0.00 0.00 3.51
68 69 1.337823 ACAGATACAACCCACGTCAGC 60.338 52.381 0.00 0.00 0.00 4.26
69 70 0.973632 AGATACAACCCACGTCAGCA 59.026 50.000 0.00 0.00 0.00 4.41
70 71 1.076332 GATACAACCCACGTCAGCAC 58.924 55.000 0.00 0.00 0.00 4.40
71 72 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
72 73 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
73 74 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
74 75 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
75 76 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
76 77 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
77 78 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
78 79 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
79 80 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
80 81 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
81 82 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
82 83 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
83 84 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
84 85 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
85 86 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
86 87 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
87 88 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
88 89 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
89 90 3.002656 GCACACACGCATCTTATAGCATT 59.997 43.478 0.00 0.00 0.00 3.56
90 91 4.211164 GCACACACGCATCTTATAGCATTA 59.789 41.667 0.00 0.00 0.00 1.90
91 92 5.670097 CACACACGCATCTTATAGCATTAC 58.330 41.667 0.00 0.00 0.00 1.89
92 93 5.234116 CACACACGCATCTTATAGCATTACA 59.766 40.000 0.00 0.00 0.00 2.41
93 94 5.991606 ACACACGCATCTTATAGCATTACAT 59.008 36.000 0.00 0.00 0.00 2.29
94 95 6.146184 ACACACGCATCTTATAGCATTACATC 59.854 38.462 0.00 0.00 0.00 3.06
95 96 5.639506 ACACGCATCTTATAGCATTACATCC 59.360 40.000 0.00 0.00 0.00 3.51
96 97 5.639082 CACGCATCTTATAGCATTACATCCA 59.361 40.000 0.00 0.00 0.00 3.41
97 98 6.147656 CACGCATCTTATAGCATTACATCCAA 59.852 38.462 0.00 0.00 0.00 3.53
98 99 6.881065 ACGCATCTTATAGCATTACATCCAAT 59.119 34.615 0.00 0.00 0.00 3.16
99 100 7.148356 ACGCATCTTATAGCATTACATCCAATG 60.148 37.037 0.00 0.00 38.65 2.82
100 101 7.478322 GCATCTTATAGCATTACATCCAATGG 58.522 38.462 0.00 0.00 36.58 3.16
101 102 7.478322 CATCTTATAGCATTACATCCAATGGC 58.522 38.462 0.00 0.00 36.58 4.40
102 103 6.782986 TCTTATAGCATTACATCCAATGGCT 58.217 36.000 0.00 0.00 36.58 4.75
103 104 7.917003 TCTTATAGCATTACATCCAATGGCTA 58.083 34.615 0.00 0.00 36.58 3.93
104 105 8.551440 TCTTATAGCATTACATCCAATGGCTAT 58.449 33.333 0.00 0.00 38.02 2.97
105 106 9.836864 CTTATAGCATTACATCCAATGGCTATA 57.163 33.333 0.00 0.00 37.00 1.31
108 109 7.838079 AGCATTACATCCAATGGCTATAAAA 57.162 32.000 0.00 0.00 36.58 1.52
109 110 8.248904 AGCATTACATCCAATGGCTATAAAAA 57.751 30.769 0.00 0.00 36.58 1.94
110 111 8.362639 AGCATTACATCCAATGGCTATAAAAAG 58.637 33.333 0.00 0.00 36.58 2.27
111 112 8.143835 GCATTACATCCAATGGCTATAAAAAGT 58.856 33.333 0.00 0.00 36.58 2.66
112 113 9.467258 CATTACATCCAATGGCTATAAAAAGTG 57.533 33.333 0.00 0.00 33.16 3.16
113 114 8.815565 TTACATCCAATGGCTATAAAAAGTGA 57.184 30.769 0.00 0.00 33.60 3.41
114 115 7.716799 ACATCCAATGGCTATAAAAAGTGAA 57.283 32.000 0.00 0.00 33.60 3.18
115 116 8.310122 ACATCCAATGGCTATAAAAAGTGAAT 57.690 30.769 0.00 0.00 33.60 2.57
116 117 8.199449 ACATCCAATGGCTATAAAAAGTGAATG 58.801 33.333 0.00 0.00 33.60 2.67
117 118 7.953005 TCCAATGGCTATAAAAAGTGAATGA 57.047 32.000 0.00 0.00 0.00 2.57
118 119 7.999679 TCCAATGGCTATAAAAAGTGAATGAG 58.000 34.615 0.00 0.00 0.00 2.90
119 120 7.833682 TCCAATGGCTATAAAAAGTGAATGAGA 59.166 33.333 0.00 0.00 0.00 3.27
120 121 7.917505 CCAATGGCTATAAAAAGTGAATGAGAC 59.082 37.037 0.00 0.00 0.00 3.36
121 122 7.573968 ATGGCTATAAAAAGTGAATGAGACC 57.426 36.000 0.00 0.00 0.00 3.85
122 123 6.480763 TGGCTATAAAAAGTGAATGAGACCA 58.519 36.000 0.00 0.00 0.00 4.02
123 124 6.945435 TGGCTATAAAAAGTGAATGAGACCAA 59.055 34.615 0.00 0.00 0.00 3.67
124 125 7.450014 TGGCTATAAAAAGTGAATGAGACCAAA 59.550 33.333 0.00 0.00 0.00 3.28
125 126 8.470002 GGCTATAAAAAGTGAATGAGACCAAAT 58.530 33.333 0.00 0.00 0.00 2.32
126 127 9.860898 GCTATAAAAAGTGAATGAGACCAAATT 57.139 29.630 0.00 0.00 0.00 1.82
162 163 9.809096 CTAGATGAGTTCTAGCAAAACTGATAA 57.191 33.333 0.32 0.00 45.63 1.75
211 212 4.382386 AAACAGCTAACCATAACCACCT 57.618 40.909 0.00 0.00 0.00 4.00
279 283 2.229675 TGATCTGCATGTAGCTTCCG 57.770 50.000 5.85 0.00 45.94 4.30
294 298 3.383185 AGCTTCCGAAACCACAAATCAAA 59.617 39.130 0.00 0.00 0.00 2.69
355 359 3.126514 CCACAGATTGAAGATCACAGTGC 59.873 47.826 0.00 0.00 0.00 4.40
375 381 2.650608 CCGACTTCGAAAAAGCTTTGG 58.349 47.619 13.54 5.66 43.02 3.28
388 394 1.652012 CTTTGGAAACGGCGCAAGA 59.348 52.632 10.83 0.00 43.02 3.02
493 913 4.872691 AGCAATAATGTTTCCAGACTCGAG 59.127 41.667 11.84 11.84 0.00 4.04
497 917 0.756294 TGTTTCCAGACTCGAGGCAA 59.244 50.000 22.94 2.67 0.00 4.52
533 953 2.169832 AACCGAACTGGATGTGACAG 57.830 50.000 0.00 0.00 42.00 3.51
559 980 3.314080 TCAAAAGCACGGTGGAAAGTAAG 59.686 43.478 10.60 0.00 0.00 2.34
903 1335 1.621992 ACTCAACTCGAGCCTTCAGA 58.378 50.000 13.61 0.78 46.63 3.27
912 1344 1.261619 CGAGCCTTCAGACACAACAAC 59.738 52.381 0.00 0.00 0.00 3.32
1087 1526 2.279851 TGCACCACCACGAGTTCG 60.280 61.111 0.00 0.00 46.33 3.95
1103 1542 2.349886 AGTTCGTCGTACGTGATCCTAC 59.650 50.000 16.05 9.37 43.14 3.18
1111 1550 3.546407 CGTGATCCTACGTGCTACC 57.454 57.895 0.00 0.00 39.13 3.18
1112 1551 0.030369 CGTGATCCTACGTGCTACCC 59.970 60.000 0.00 0.00 39.13 3.69
1113 1552 1.400737 GTGATCCTACGTGCTACCCT 58.599 55.000 0.00 0.00 0.00 4.34
1114 1553 1.067212 GTGATCCTACGTGCTACCCTG 59.933 57.143 0.00 0.00 0.00 4.45
1115 1554 0.032267 GATCCTACGTGCTACCCTGC 59.968 60.000 0.00 0.00 0.00 4.85
1117 1556 2.058595 CCTACGTGCTACCCTGCCT 61.059 63.158 0.00 0.00 0.00 4.75
1118 1557 1.614241 CCTACGTGCTACCCTGCCTT 61.614 60.000 0.00 0.00 0.00 4.35
1149 1605 2.865551 CAATGGCGTTGCTGTTTTTCTT 59.134 40.909 6.49 0.00 0.00 2.52
1151 1607 1.203523 TGGCGTTGCTGTTTTTCTTGT 59.796 42.857 0.00 0.00 0.00 3.16
1152 1608 1.852280 GGCGTTGCTGTTTTTCTTGTC 59.148 47.619 0.00 0.00 0.00 3.18
1158 1623 4.882671 TGCTGTTTTTCTTGTCTCTGAC 57.117 40.909 0.00 0.00 0.00 3.51
1546 2011 1.265454 ACAAGCCCTACCCCTTCGAG 61.265 60.000 0.00 0.00 0.00 4.04
1722 4148 3.394719 GCCAAGGTACTGCTAGCTAATC 58.605 50.000 17.23 1.40 40.86 1.75
1749 4175 1.006805 GGCGATCGATGCTGCTAGT 60.007 57.895 21.57 0.00 0.00 2.57
1824 4253 4.947147 TTGGCAGACACCACCGCC 62.947 66.667 0.00 0.00 45.11 6.13
2598 5045 2.264794 GTCACGCCGGAGAACCAT 59.735 61.111 13.83 0.00 35.59 3.55
2835 5282 1.080569 GGCAATGGCGTTTCTGGTG 60.081 57.895 0.00 0.00 42.47 4.17
3152 5603 8.897872 AAATGTGCTGATTTGAAAGAGAAAAT 57.102 26.923 0.00 0.00 0.00 1.82
3171 5622 8.757982 AGAAAATACATCATTGATTAGCCAGT 57.242 30.769 0.00 0.00 0.00 4.00
3189 5640 4.040952 GCCAGTACTCATATGTGGAGGATT 59.959 45.833 12.30 0.00 36.70 3.01
3190 5641 5.455326 GCCAGTACTCATATGTGGAGGATTT 60.455 44.000 12.30 0.00 36.70 2.17
3191 5642 6.595682 CCAGTACTCATATGTGGAGGATTTT 58.404 40.000 9.45 0.00 36.70 1.82
3192 5643 7.056635 CCAGTACTCATATGTGGAGGATTTTT 58.943 38.462 9.45 0.00 36.70 1.94
3281 5735 2.550855 CCGGCCTCTGCATATTACACAT 60.551 50.000 0.00 0.00 40.13 3.21
3282 5736 2.481568 CGGCCTCTGCATATTACACATG 59.518 50.000 0.00 0.00 40.13 3.21
3283 5737 3.743521 GGCCTCTGCATATTACACATGA 58.256 45.455 0.00 0.00 40.13 3.07
3284 5738 3.750130 GGCCTCTGCATATTACACATGAG 59.250 47.826 0.00 0.00 40.13 2.90
3285 5739 3.188048 GCCTCTGCATATTACACATGAGC 59.812 47.826 0.00 0.00 37.47 4.26
3286 5740 4.383173 CCTCTGCATATTACACATGAGCA 58.617 43.478 0.00 0.00 0.00 4.26
3287 5741 4.818005 CCTCTGCATATTACACATGAGCAA 59.182 41.667 0.00 0.00 0.00 3.91
3288 5742 5.472478 CCTCTGCATATTACACATGAGCAAT 59.528 40.000 0.00 0.00 0.00 3.56
3289 5743 6.308371 TCTGCATATTACACATGAGCAATG 57.692 37.500 0.00 0.00 42.48 2.82
3290 5744 4.862350 TGCATATTACACATGAGCAATGC 58.138 39.130 0.00 0.00 40.22 3.56
3291 5745 4.581409 TGCATATTACACATGAGCAATGCT 59.419 37.500 7.79 7.79 43.88 3.79
3292 5746 5.764192 TGCATATTACACATGAGCAATGCTA 59.236 36.000 8.12 0.00 39.88 3.49
3293 5747 6.082338 GCATATTACACATGAGCAATGCTAC 58.918 40.000 8.12 2.57 39.88 3.58
3294 5748 6.293571 GCATATTACACATGAGCAATGCTACA 60.294 38.462 8.12 8.77 39.88 2.74
3295 5749 7.574404 GCATATTACACATGAGCAATGCTACAT 60.574 37.037 8.12 10.79 39.88 2.29
3296 5750 5.739752 TTACACATGAGCAATGCTACATC 57.260 39.130 8.12 0.00 39.88 3.06
3297 5751 3.882444 ACACATGAGCAATGCTACATCT 58.118 40.909 8.12 0.00 39.88 2.90
3298 5752 5.027293 ACACATGAGCAATGCTACATCTA 57.973 39.130 8.12 0.00 39.88 1.98
3299 5753 4.813161 ACACATGAGCAATGCTACATCTAC 59.187 41.667 8.12 0.00 39.88 2.59
3300 5754 4.053983 ACATGAGCAATGCTACATCTACG 58.946 43.478 8.12 4.78 39.88 3.51
3301 5755 3.801114 TGAGCAATGCTACATCTACGT 57.199 42.857 8.12 0.00 39.88 3.57
3302 5756 4.911514 TGAGCAATGCTACATCTACGTA 57.088 40.909 8.12 0.00 39.88 3.57
3303 5757 5.257082 TGAGCAATGCTACATCTACGTAA 57.743 39.130 8.12 0.00 39.88 3.18
3304 5758 5.842907 TGAGCAATGCTACATCTACGTAAT 58.157 37.500 8.12 0.00 39.88 1.89
3305 5759 6.280643 TGAGCAATGCTACATCTACGTAATT 58.719 36.000 8.12 0.00 39.88 1.40
3306 5760 7.430441 TGAGCAATGCTACATCTACGTAATTA 58.570 34.615 8.12 0.00 39.88 1.40
3307 5761 7.381408 TGAGCAATGCTACATCTACGTAATTAC 59.619 37.037 8.12 5.47 39.88 1.89
3308 5762 7.434492 AGCAATGCTACATCTACGTAATTACT 58.566 34.615 5.69 3.86 36.99 2.24
3309 5763 7.926555 AGCAATGCTACATCTACGTAATTACTT 59.073 33.333 5.69 6.93 36.99 2.24
3310 5764 8.548721 GCAATGCTACATCTACGTAATTACTTT 58.451 33.333 13.56 3.31 0.00 2.66
3329 5783 9.815936 ATTACTTTACGTGTTTTATGTAACAGC 57.184 29.630 0.00 0.00 39.76 4.40
3330 5784 7.249186 ACTTTACGTGTTTTATGTAACAGCA 57.751 32.000 0.00 0.00 39.76 4.41
3331 5785 7.695820 ACTTTACGTGTTTTATGTAACAGCAA 58.304 30.769 0.00 0.00 39.76 3.91
3332 5786 8.182881 ACTTTACGTGTTTTATGTAACAGCAAA 58.817 29.630 0.00 0.00 39.76 3.68
3333 5787 7.895582 TTACGTGTTTTATGTAACAGCAAAC 57.104 32.000 0.00 0.00 38.60 2.93
3334 5788 4.965158 ACGTGTTTTATGTAACAGCAAACG 59.035 37.500 0.00 0.00 38.60 3.60
3335 5789 4.965158 CGTGTTTTATGTAACAGCAAACGT 59.035 37.500 0.00 0.00 38.60 3.99
3336 5790 5.108928 CGTGTTTTATGTAACAGCAAACGTG 60.109 40.000 0.00 0.00 38.60 4.49
3337 5791 5.172411 GTGTTTTATGTAACAGCAAACGTGG 59.828 40.000 0.00 0.00 38.60 4.94
3338 5792 3.546002 TTATGTAACAGCAAACGTGGC 57.454 42.857 4.40 4.40 0.00 5.01
3339 5793 1.313772 ATGTAACAGCAAACGTGGCA 58.686 45.000 14.05 0.00 0.00 4.92
3340 5794 1.095600 TGTAACAGCAAACGTGGCAA 58.904 45.000 14.05 0.00 0.00 4.52
3341 5795 1.064803 TGTAACAGCAAACGTGGCAAG 59.935 47.619 14.05 0.00 0.00 4.01
3342 5796 1.064952 GTAACAGCAAACGTGGCAAGT 59.935 47.619 14.05 0.00 0.00 3.16
3343 5797 0.179140 AACAGCAAACGTGGCAAGTG 60.179 50.000 6.88 6.88 0.00 3.16
3344 5798 1.029408 ACAGCAAACGTGGCAAGTGA 61.029 50.000 6.88 0.00 0.00 3.41
3345 5799 0.317269 CAGCAAACGTGGCAAGTGAG 60.317 55.000 6.88 4.04 0.00 3.51
3346 5800 1.008538 GCAAACGTGGCAAGTGAGG 60.009 57.895 6.88 1.07 0.00 3.86
3347 5801 1.444119 GCAAACGTGGCAAGTGAGGA 61.444 55.000 6.88 0.00 0.00 3.71
3348 5802 1.238439 CAAACGTGGCAAGTGAGGAT 58.762 50.000 6.88 0.00 0.00 3.24
3349 5803 1.608590 CAAACGTGGCAAGTGAGGATT 59.391 47.619 6.88 0.00 0.00 3.01
3350 5804 1.238439 AACGTGGCAAGTGAGGATTG 58.762 50.000 6.88 0.00 0.00 2.67
3351 5805 0.606401 ACGTGGCAAGTGAGGATTGG 60.606 55.000 4.97 0.00 0.00 3.16
3352 5806 1.308069 CGTGGCAAGTGAGGATTGGG 61.308 60.000 0.00 0.00 0.00 4.12
3353 5807 0.967380 GTGGCAAGTGAGGATTGGGG 60.967 60.000 0.00 0.00 0.00 4.96
3354 5808 1.139498 TGGCAAGTGAGGATTGGGGA 61.139 55.000 0.00 0.00 0.00 4.81
3355 5809 0.259938 GGCAAGTGAGGATTGGGGAT 59.740 55.000 0.00 0.00 0.00 3.85
3356 5810 1.396653 GCAAGTGAGGATTGGGGATG 58.603 55.000 0.00 0.00 0.00 3.51
3357 5811 2.025863 GCAAGTGAGGATTGGGGATGG 61.026 57.143 0.00 0.00 0.00 3.51
3358 5812 0.929244 AAGTGAGGATTGGGGATGGG 59.071 55.000 0.00 0.00 0.00 4.00
3359 5813 0.046242 AGTGAGGATTGGGGATGGGA 59.954 55.000 0.00 0.00 0.00 4.37
3360 5814 0.926293 GTGAGGATTGGGGATGGGAA 59.074 55.000 0.00 0.00 0.00 3.97
3361 5815 1.133668 GTGAGGATTGGGGATGGGAAG 60.134 57.143 0.00 0.00 0.00 3.46
3362 5816 1.274943 TGAGGATTGGGGATGGGAAGA 60.275 52.381 0.00 0.00 0.00 2.87
3363 5817 1.423161 GAGGATTGGGGATGGGAAGAG 59.577 57.143 0.00 0.00 0.00 2.85
3364 5818 0.480252 GGATTGGGGATGGGAAGAGG 59.520 60.000 0.00 0.00 0.00 3.69
3365 5819 1.522900 GATTGGGGATGGGAAGAGGA 58.477 55.000 0.00 0.00 0.00 3.71
3366 5820 1.852965 GATTGGGGATGGGAAGAGGAA 59.147 52.381 0.00 0.00 0.00 3.36
3367 5821 1.298953 TTGGGGATGGGAAGAGGAAG 58.701 55.000 0.00 0.00 0.00 3.46
3368 5822 0.624500 TGGGGATGGGAAGAGGAAGG 60.625 60.000 0.00 0.00 0.00 3.46
3369 5823 1.356494 GGGGATGGGAAGAGGAAGGG 61.356 65.000 0.00 0.00 0.00 3.95
3370 5824 1.356494 GGGATGGGAAGAGGAAGGGG 61.356 65.000 0.00 0.00 0.00 4.79
3371 5825 1.534203 GATGGGAAGAGGAAGGGGC 59.466 63.158 0.00 0.00 0.00 5.80
3372 5826 2.000825 GATGGGAAGAGGAAGGGGCC 62.001 65.000 0.00 0.00 0.00 5.80
3373 5827 3.421386 GGGAAGAGGAAGGGGCCC 61.421 72.222 17.12 17.12 0.00 5.80
3374 5828 2.614013 GGAAGAGGAAGGGGCCCA 60.614 66.667 27.72 0.00 0.00 5.36
3375 5829 2.677848 GAAGAGGAAGGGGCCCAC 59.322 66.667 27.72 18.14 0.00 4.61
3376 5830 2.941583 AAGAGGAAGGGGCCCACC 60.942 66.667 27.72 26.16 39.11 4.61
3386 5840 4.899243 GGCCCACCCCCATTAAAA 57.101 55.556 0.00 0.00 0.00 1.52
3387 5841 3.333009 GGCCCACCCCCATTAAAAT 57.667 52.632 0.00 0.00 0.00 1.82
3388 5842 1.128200 GGCCCACCCCCATTAAAATC 58.872 55.000 0.00 0.00 0.00 2.17
3389 5843 1.623834 GGCCCACCCCCATTAAAATCA 60.624 52.381 0.00 0.00 0.00 2.57
3390 5844 1.762370 GCCCACCCCCATTAAAATCAG 59.238 52.381 0.00 0.00 0.00 2.90
3391 5845 2.397597 CCCACCCCCATTAAAATCAGG 58.602 52.381 0.00 0.00 0.00 3.86
3392 5846 2.397597 CCACCCCCATTAAAATCAGGG 58.602 52.381 5.39 5.39 41.12 4.45
3413 5867 3.904965 GGGGGAGAGAGGTTTAGATTAGG 59.095 52.174 0.00 0.00 0.00 2.69
3414 5868 4.388804 GGGGGAGAGAGGTTTAGATTAGGA 60.389 50.000 0.00 0.00 0.00 2.94
3415 5869 5.217400 GGGGAGAGAGGTTTAGATTAGGAA 58.783 45.833 0.00 0.00 0.00 3.36
3416 5870 5.305902 GGGGAGAGAGGTTTAGATTAGGAAG 59.694 48.000 0.00 0.00 0.00 3.46
3417 5871 5.900699 GGGAGAGAGGTTTAGATTAGGAAGT 59.099 44.000 0.00 0.00 0.00 3.01
3418 5872 6.384595 GGGAGAGAGGTTTAGATTAGGAAGTT 59.615 42.308 0.00 0.00 0.00 2.66
3419 5873 7.092802 GGGAGAGAGGTTTAGATTAGGAAGTTT 60.093 40.741 0.00 0.00 0.00 2.66
3420 5874 8.979534 GGAGAGAGGTTTAGATTAGGAAGTTTA 58.020 37.037 0.00 0.00 0.00 2.01
3421 5875 9.806203 GAGAGAGGTTTAGATTAGGAAGTTTAC 57.194 37.037 0.00 0.00 0.00 2.01
3422 5876 8.468399 AGAGAGGTTTAGATTAGGAAGTTTACG 58.532 37.037 0.00 0.00 0.00 3.18
3423 5877 8.131847 AGAGGTTTAGATTAGGAAGTTTACGT 57.868 34.615 0.00 0.00 0.00 3.57
3424 5878 9.247861 AGAGGTTTAGATTAGGAAGTTTACGTA 57.752 33.333 0.00 0.00 0.00 3.57
3425 5879 9.860898 GAGGTTTAGATTAGGAAGTTTACGTAA 57.139 33.333 3.29 3.29 0.00 3.18
3426 5880 9.645059 AGGTTTAGATTAGGAAGTTTACGTAAC 57.355 33.333 7.70 3.77 36.99 2.50
3450 5904 8.579682 ACTTTACGTAGTTGTTTAAGTAGGTG 57.420 34.615 5.07 0.00 37.78 4.00
3451 5905 8.197439 ACTTTACGTAGTTGTTTAAGTAGGTGT 58.803 33.333 5.07 0.00 37.78 4.16
3452 5906 9.677567 CTTTACGTAGTTGTTTAAGTAGGTGTA 57.322 33.333 0.00 0.00 37.78 2.90
3453 5907 9.677567 TTTACGTAGTTGTTTAAGTAGGTGTAG 57.322 33.333 0.00 0.00 37.78 2.74
3454 5908 7.277174 ACGTAGTTGTTTAAGTAGGTGTAGT 57.723 36.000 0.00 0.00 37.78 2.73
3455 5909 8.391075 ACGTAGTTGTTTAAGTAGGTGTAGTA 57.609 34.615 0.00 0.00 37.78 1.82
3456 5910 9.014297 ACGTAGTTGTTTAAGTAGGTGTAGTAT 57.986 33.333 0.00 0.00 37.78 2.12
3457 5911 9.846248 CGTAGTTGTTTAAGTAGGTGTAGTATT 57.154 33.333 0.00 0.00 0.00 1.89
3605 6070 2.844362 CCCTATGCTCCAGCCGGA 60.844 66.667 5.05 0.00 41.18 5.14
3621 6086 4.056050 AGCCGGATTGACGTTATCATAAC 58.944 43.478 5.05 0.00 37.11 1.89
3622 6087 4.056050 GCCGGATTGACGTTATCATAACT 58.944 43.478 5.05 0.00 37.11 2.24
3623 6088 5.010314 AGCCGGATTGACGTTATCATAACTA 59.990 40.000 5.05 0.00 37.11 2.24
3624 6089 5.345202 GCCGGATTGACGTTATCATAACTAG 59.655 44.000 5.05 0.00 37.11 2.57
3625 6090 5.862323 CCGGATTGACGTTATCATAACTAGG 59.138 44.000 0.00 0.00 37.11 3.02
3626 6091 6.294342 CCGGATTGACGTTATCATAACTAGGA 60.294 42.308 0.00 0.00 37.11 2.94
3627 6092 7.143340 CGGATTGACGTTATCATAACTAGGAA 58.857 38.462 5.99 0.00 37.11 3.36
3628 6093 7.650504 CGGATTGACGTTATCATAACTAGGAAA 59.349 37.037 5.99 0.00 37.11 3.13
3629 6094 9.321562 GGATTGACGTTATCATAACTAGGAAAA 57.678 33.333 5.99 0.00 37.11 2.29
3633 6098 8.609176 TGACGTTATCATAACTAGGAAAATTGC 58.391 33.333 5.99 0.00 29.99 3.56
3634 6099 7.927048 ACGTTATCATAACTAGGAAAATTGCC 58.073 34.615 5.99 0.00 0.00 4.52
3635 6100 7.012989 ACGTTATCATAACTAGGAAAATTGCCC 59.987 37.037 5.99 0.00 0.00 5.36
3636 6101 7.360361 GTTATCATAACTAGGAAAATTGCCCG 58.640 38.462 0.00 0.00 0.00 6.13
3637 6102 4.850680 TCATAACTAGGAAAATTGCCCGT 58.149 39.130 0.00 0.00 0.00 5.28
3638 6103 4.638421 TCATAACTAGGAAAATTGCCCGTG 59.362 41.667 0.00 0.00 0.00 4.94
3639 6104 1.173913 ACTAGGAAAATTGCCCGTGC 58.826 50.000 0.00 0.00 38.26 5.34
3640 6105 0.098728 CTAGGAAAATTGCCCGTGCG 59.901 55.000 0.00 0.00 41.78 5.34
3641 6106 0.606944 TAGGAAAATTGCCCGTGCGT 60.607 50.000 0.00 0.00 41.78 5.24
3642 6107 1.006688 GGAAAATTGCCCGTGCGTT 60.007 52.632 0.00 0.00 41.78 4.84
3643 6108 1.281566 GGAAAATTGCCCGTGCGTTG 61.282 55.000 0.00 0.00 41.78 4.10
3644 6109 1.885814 GAAAATTGCCCGTGCGTTGC 61.886 55.000 0.00 0.00 41.78 4.17
3645 6110 2.635229 AAAATTGCCCGTGCGTTGCA 62.635 50.000 2.68 2.68 41.78 4.08
3647 6112 3.839642 ATTGCCCGTGCGTTGCAAC 62.840 57.895 19.89 19.89 46.60 4.17
3657 6122 4.713946 GTTGCAACGGGAGATCCA 57.286 55.556 14.90 0.00 37.91 3.41
3658 6123 2.941210 GTTGCAACGGGAGATCCAA 58.059 52.632 14.90 0.00 37.91 3.53
3659 6124 0.521735 GTTGCAACGGGAGATCCAAC 59.478 55.000 14.90 0.00 37.91 3.77
3660 6125 0.400213 TTGCAACGGGAGATCCAACT 59.600 50.000 0.00 0.00 37.91 3.16
3661 6126 1.271856 TGCAACGGGAGATCCAACTA 58.728 50.000 0.47 0.00 37.91 2.24
3662 6127 1.837439 TGCAACGGGAGATCCAACTAT 59.163 47.619 0.47 0.00 37.91 2.12
3663 6128 3.035363 TGCAACGGGAGATCCAACTATA 58.965 45.455 0.47 0.00 37.91 1.31
3664 6129 3.452990 TGCAACGGGAGATCCAACTATAA 59.547 43.478 0.47 0.00 37.91 0.98
3665 6130 4.080807 TGCAACGGGAGATCCAACTATAAA 60.081 41.667 0.47 0.00 37.91 1.40
3666 6131 4.511826 GCAACGGGAGATCCAACTATAAAG 59.488 45.833 0.47 0.00 37.91 1.85
3667 6132 5.671493 CAACGGGAGATCCAACTATAAAGT 58.329 41.667 0.47 0.00 37.65 2.66
3668 6133 6.684613 GCAACGGGAGATCCAACTATAAAGTA 60.685 42.308 0.47 0.00 33.75 2.24
3669 6134 6.402456 ACGGGAGATCCAACTATAAAGTAC 57.598 41.667 0.47 0.00 33.75 2.73
3670 6135 6.134754 ACGGGAGATCCAACTATAAAGTACT 58.865 40.000 0.47 0.00 33.75 2.73
3671 6136 7.293073 ACGGGAGATCCAACTATAAAGTACTA 58.707 38.462 0.00 0.00 33.75 1.82
3672 6137 7.949006 ACGGGAGATCCAACTATAAAGTACTAT 59.051 37.037 0.00 0.00 33.75 2.12
3673 6138 8.460428 CGGGAGATCCAACTATAAAGTACTATC 58.540 40.741 0.00 0.00 33.75 2.08
3674 6139 9.310449 GGGAGATCCAACTATAAAGTACTATCA 57.690 37.037 0.00 0.00 33.75 2.15
3688 6153 8.978564 AAAGTACTATCATGATAGCGAGAATG 57.021 34.615 33.26 15.24 43.46 2.67
3689 6154 7.094508 AGTACTATCATGATAGCGAGAATGG 57.905 40.000 33.26 14.63 43.46 3.16
3690 6155 5.336150 ACTATCATGATAGCGAGAATGGG 57.664 43.478 33.26 14.02 43.46 4.00
3691 6156 2.462456 TCATGATAGCGAGAATGGGC 57.538 50.000 0.00 0.00 0.00 5.36
3692 6157 1.693606 TCATGATAGCGAGAATGGGCA 59.306 47.619 0.00 0.00 0.00 5.36
3693 6158 2.104622 TCATGATAGCGAGAATGGGCAA 59.895 45.455 0.00 0.00 0.00 4.52
3694 6159 2.708216 TGATAGCGAGAATGGGCAAA 57.292 45.000 0.00 0.00 0.00 3.68
3695 6160 2.997980 TGATAGCGAGAATGGGCAAAA 58.002 42.857 0.00 0.00 0.00 2.44
3696 6161 3.351740 TGATAGCGAGAATGGGCAAAAA 58.648 40.909 0.00 0.00 0.00 1.94
3747 6212 3.587797 TTTTCTTCGTATCTGCGTCCT 57.412 42.857 0.00 0.00 0.00 3.85
3748 6213 2.561733 TTCTTCGTATCTGCGTCCTG 57.438 50.000 0.00 0.00 0.00 3.86
3749 6214 0.738975 TCTTCGTATCTGCGTCCTGG 59.261 55.000 0.00 0.00 0.00 4.45
3750 6215 0.456221 CTTCGTATCTGCGTCCTGGT 59.544 55.000 0.00 0.00 0.00 4.00
3751 6216 0.892755 TTCGTATCTGCGTCCTGGTT 59.107 50.000 0.00 0.00 0.00 3.67
3752 6217 0.172578 TCGTATCTGCGTCCTGGTTG 59.827 55.000 0.00 0.00 0.00 3.77
3753 6218 0.108804 CGTATCTGCGTCCTGGTTGT 60.109 55.000 0.00 0.00 0.00 3.32
3754 6219 1.641577 GTATCTGCGTCCTGGTTGTC 58.358 55.000 0.00 0.00 0.00 3.18
3755 6220 1.067142 GTATCTGCGTCCTGGTTGTCA 60.067 52.381 0.00 0.00 0.00 3.58
3756 6221 0.036952 ATCTGCGTCCTGGTTGTCAG 60.037 55.000 0.00 0.00 43.00 3.51
3757 6222 2.280797 TGCGTCCTGGTTGTCAGC 60.281 61.111 0.00 0.00 42.05 4.26
3758 6223 2.031163 GCGTCCTGGTTGTCAGCT 59.969 61.111 0.00 0.00 42.05 4.24
3759 6224 1.598130 GCGTCCTGGTTGTCAGCTT 60.598 57.895 0.00 0.00 42.05 3.74
3760 6225 1.166531 GCGTCCTGGTTGTCAGCTTT 61.167 55.000 0.00 0.00 42.05 3.51
3761 6226 1.308998 CGTCCTGGTTGTCAGCTTTT 58.691 50.000 0.00 0.00 42.05 2.27
3762 6227 2.489971 CGTCCTGGTTGTCAGCTTTTA 58.510 47.619 0.00 0.00 42.05 1.52
3763 6228 2.480419 CGTCCTGGTTGTCAGCTTTTAG 59.520 50.000 0.00 0.00 42.05 1.85
3764 6229 2.814336 GTCCTGGTTGTCAGCTTTTAGG 59.186 50.000 0.00 0.00 42.05 2.69
3765 6230 1.541588 CCTGGTTGTCAGCTTTTAGGC 59.458 52.381 0.00 0.00 42.05 3.93
3766 6231 2.229792 CTGGTTGTCAGCTTTTAGGCA 58.770 47.619 0.00 0.00 36.60 4.75
3767 6232 2.821969 CTGGTTGTCAGCTTTTAGGCAT 59.178 45.455 0.00 0.00 36.60 4.40
3768 6233 2.557924 TGGTTGTCAGCTTTTAGGCATG 59.442 45.455 0.00 0.00 34.17 4.06
3769 6234 2.599659 GTTGTCAGCTTTTAGGCATGC 58.400 47.619 9.90 9.90 34.17 4.06
3770 6235 1.908344 TGTCAGCTTTTAGGCATGCA 58.092 45.000 21.36 0.00 34.17 3.96
3771 6236 2.449464 TGTCAGCTTTTAGGCATGCAT 58.551 42.857 21.36 16.31 34.17 3.96
3772 6237 2.164827 TGTCAGCTTTTAGGCATGCATG 59.835 45.455 22.70 22.70 34.17 4.06
3793 6258 3.355626 CGTCATCGCCTAAGATCTTGA 57.644 47.619 18.47 6.94 0.00 3.02
3794 6259 3.906998 CGTCATCGCCTAAGATCTTGAT 58.093 45.455 18.47 9.01 0.00 2.57
3795 6260 5.048153 CGTCATCGCCTAAGATCTTGATA 57.952 43.478 18.47 0.00 0.00 2.15
3796 6261 5.092105 CGTCATCGCCTAAGATCTTGATAG 58.908 45.833 18.47 7.45 0.00 2.08
3797 6262 5.335269 CGTCATCGCCTAAGATCTTGATAGT 60.335 44.000 18.47 0.00 0.00 2.12
3798 6263 6.128254 CGTCATCGCCTAAGATCTTGATAGTA 60.128 42.308 18.47 0.00 0.00 1.82
3799 6264 7.573283 CGTCATCGCCTAAGATCTTGATAGTAA 60.573 40.741 18.47 0.00 0.00 2.24
3800 6265 8.247562 GTCATCGCCTAAGATCTTGATAGTAAT 58.752 37.037 18.47 0.73 0.00 1.89
3801 6266 8.462811 TCATCGCCTAAGATCTTGATAGTAATC 58.537 37.037 18.47 0.00 0.00 1.75
3802 6267 7.159322 TCGCCTAAGATCTTGATAGTAATCC 57.841 40.000 18.47 0.00 0.00 3.01
3803 6268 6.030849 CGCCTAAGATCTTGATAGTAATCCG 58.969 44.000 18.47 2.92 0.00 4.18
3804 6269 5.808030 GCCTAAGATCTTGATAGTAATCCGC 59.192 44.000 18.47 2.08 0.00 5.54
3805 6270 6.334202 CCTAAGATCTTGATAGTAATCCGCC 58.666 44.000 18.47 0.00 0.00 6.13
3806 6271 6.153680 CCTAAGATCTTGATAGTAATCCGCCT 59.846 42.308 18.47 0.00 0.00 5.52
3807 6272 6.426646 AAGATCTTGATAGTAATCCGCCTT 57.573 37.500 7.30 0.00 0.00 4.35
3808 6273 7.540474 AAGATCTTGATAGTAATCCGCCTTA 57.460 36.000 7.30 0.00 0.00 2.69
3809 6274 7.164230 AGATCTTGATAGTAATCCGCCTTAG 57.836 40.000 0.00 0.00 0.00 2.18
3810 6275 5.135508 TCTTGATAGTAATCCGCCTTAGC 57.864 43.478 0.00 0.00 0.00 3.09
3811 6276 4.833380 TCTTGATAGTAATCCGCCTTAGCT 59.167 41.667 0.00 0.00 36.60 3.32
3812 6277 4.785511 TGATAGTAATCCGCCTTAGCTC 57.214 45.455 0.00 0.00 36.60 4.09
3813 6278 3.510360 TGATAGTAATCCGCCTTAGCTCC 59.490 47.826 0.00 0.00 36.60 4.70
3814 6279 1.789523 AGTAATCCGCCTTAGCTCCA 58.210 50.000 0.00 0.00 36.60 3.86
3815 6280 2.330216 AGTAATCCGCCTTAGCTCCAT 58.670 47.619 0.00 0.00 36.60 3.41
3816 6281 2.300437 AGTAATCCGCCTTAGCTCCATC 59.700 50.000 0.00 0.00 36.60 3.51
3817 6282 1.131638 AATCCGCCTTAGCTCCATCA 58.868 50.000 0.00 0.00 36.60 3.07
3818 6283 1.356124 ATCCGCCTTAGCTCCATCAT 58.644 50.000 0.00 0.00 36.60 2.45
3819 6284 0.394192 TCCGCCTTAGCTCCATCATG 59.606 55.000 0.00 0.00 36.60 3.07
3820 6285 0.394192 CCGCCTTAGCTCCATCATGA 59.606 55.000 0.00 0.00 36.60 3.07
3821 6286 1.202687 CCGCCTTAGCTCCATCATGAA 60.203 52.381 0.00 0.00 36.60 2.57
3822 6287 2.141517 CGCCTTAGCTCCATCATGAAG 58.858 52.381 0.00 0.00 36.60 3.02
3823 6288 1.878734 GCCTTAGCTCCATCATGAAGC 59.121 52.381 9.45 9.45 35.50 3.86
3824 6289 2.502295 CCTTAGCTCCATCATGAAGCC 58.498 52.381 13.12 0.00 0.00 4.35
3825 6290 2.502295 CTTAGCTCCATCATGAAGCCC 58.498 52.381 13.12 0.00 0.00 5.19
3826 6291 0.394192 TAGCTCCATCATGAAGCCCG 59.606 55.000 13.12 0.00 0.00 6.13
3827 6292 1.895707 GCTCCATCATGAAGCCCGG 60.896 63.158 0.00 0.00 0.00 5.73
3828 6293 1.832219 CTCCATCATGAAGCCCGGA 59.168 57.895 0.73 0.33 0.00 5.14
3829 6294 0.533755 CTCCATCATGAAGCCCGGAC 60.534 60.000 0.73 0.00 0.00 4.79
3830 6295 1.889105 CCATCATGAAGCCCGGACG 60.889 63.158 0.73 0.00 0.00 4.79
3831 6296 1.153369 CATCATGAAGCCCGGACGT 60.153 57.895 0.73 0.00 0.00 4.34
3832 6297 0.744414 CATCATGAAGCCCGGACGTT 60.744 55.000 0.73 0.00 0.00 3.99
3833 6298 0.462047 ATCATGAAGCCCGGACGTTC 60.462 55.000 0.73 2.95 0.00 3.95
3834 6299 2.125673 ATGAAGCCCGGACGTTCG 60.126 61.111 9.95 9.95 0.00 3.95
3841 6306 3.110178 CCGGACGTTCGGCTTCAC 61.110 66.667 24.81 0.00 43.71 3.18
3842 6307 3.110178 CGGACGTTCGGCTTCACC 61.110 66.667 8.83 0.00 0.00 4.02
3853 6318 1.217882 GGCTTCACCGTAATGGATCG 58.782 55.000 0.00 0.00 42.00 3.69
3859 6324 2.616969 CCGTAATGGATCGGCAAGG 58.383 57.895 0.00 0.00 42.00 3.61
3860 6325 1.507141 CCGTAATGGATCGGCAAGGC 61.507 60.000 0.00 0.00 42.00 4.35
3861 6326 0.813610 CGTAATGGATCGGCAAGGCA 60.814 55.000 0.00 0.00 0.00 4.75
3862 6327 1.609208 GTAATGGATCGGCAAGGCAT 58.391 50.000 0.00 0.00 0.00 4.40
3863 6328 1.267806 GTAATGGATCGGCAAGGCATG 59.732 52.381 0.00 0.00 0.00 4.06
3864 6329 0.106569 AATGGATCGGCAAGGCATGA 60.107 50.000 0.00 0.00 0.00 3.07
3865 6330 0.111832 ATGGATCGGCAAGGCATGAT 59.888 50.000 0.00 0.00 0.00 2.45
3866 6331 0.764271 TGGATCGGCAAGGCATGATA 59.236 50.000 0.00 0.00 0.00 2.15
3867 6332 1.271001 TGGATCGGCAAGGCATGATAG 60.271 52.381 0.00 0.00 0.00 2.08
3868 6333 0.801251 GATCGGCAAGGCATGATAGC 59.199 55.000 0.00 0.00 0.00 2.97
3869 6334 0.399454 ATCGGCAAGGCATGATAGCT 59.601 50.000 0.00 0.00 34.17 3.32
3870 6335 0.181114 TCGGCAAGGCATGATAGCTT 59.819 50.000 0.00 0.00 34.17 3.74
3871 6336 0.590195 CGGCAAGGCATGATAGCTTC 59.410 55.000 0.00 0.00 34.17 3.86
3872 6337 0.590195 GGCAAGGCATGATAGCTTCG 59.410 55.000 0.00 0.00 34.17 3.79
3873 6338 0.590195 GCAAGGCATGATAGCTTCGG 59.410 55.000 0.00 0.00 34.17 4.30
3874 6339 1.959042 CAAGGCATGATAGCTTCGGT 58.041 50.000 0.00 0.00 34.17 4.69
3875 6340 1.600957 CAAGGCATGATAGCTTCGGTG 59.399 52.381 0.00 0.00 34.17 4.94
3876 6341 1.123077 AGGCATGATAGCTTCGGTGA 58.877 50.000 0.00 0.00 34.17 4.02
3877 6342 1.069823 AGGCATGATAGCTTCGGTGAG 59.930 52.381 0.00 0.00 34.17 3.51
3878 6343 0.864455 GCATGATAGCTTCGGTGAGC 59.136 55.000 0.00 0.00 43.02 4.26
3884 6349 3.869272 GCTTCGGTGAGCGCATGG 61.869 66.667 11.47 0.00 32.23 3.66
3885 6350 3.869272 CTTCGGTGAGCGCATGGC 61.869 66.667 11.47 0.00 44.05 4.40
3888 6353 4.529219 CGGTGAGCGCATGGCCTA 62.529 66.667 11.47 0.00 45.17 3.93
3889 6354 2.897350 GGTGAGCGCATGGCCTAC 60.897 66.667 11.47 0.00 45.17 3.18
3890 6355 2.125147 GTGAGCGCATGGCCTACA 60.125 61.111 11.47 0.00 45.17 2.74
3891 6356 2.176273 GTGAGCGCATGGCCTACAG 61.176 63.158 11.47 0.00 45.17 2.74
3892 6357 2.590007 GAGCGCATGGCCTACAGG 60.590 66.667 11.47 0.00 45.17 4.00
3893 6358 3.083349 AGCGCATGGCCTACAGGA 61.083 61.111 11.47 0.00 45.17 3.86
3894 6359 2.111878 GCGCATGGCCTACAGGAT 59.888 61.111 3.32 0.00 37.39 3.24
3895 6360 2.256591 GCGCATGGCCTACAGGATG 61.257 63.158 3.32 0.00 37.77 3.51
3896 6361 2.256591 CGCATGGCCTACAGGATGC 61.257 63.158 12.32 12.32 42.53 3.91
3897 6362 1.900498 GCATGGCCTACAGGATGCC 60.900 63.158 11.47 0.00 42.53 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 8.997323 CAGGTGAATGAGACCAAATTATATCTC 58.003 37.037 0.00 6.03 38.46 2.75
12 13 7.941238 CCAGGTGAATGAGACCAAATTATATCT 59.059 37.037 0.00 0.00 35.76 1.98
13 14 7.939039 TCCAGGTGAATGAGACCAAATTATATC 59.061 37.037 0.00 0.00 35.76 1.63
14 15 7.815383 TCCAGGTGAATGAGACCAAATTATAT 58.185 34.615 0.00 0.00 35.76 0.86
15 16 7.206789 TCCAGGTGAATGAGACCAAATTATA 57.793 36.000 0.00 0.00 35.76 0.98
16 17 6.078456 TCCAGGTGAATGAGACCAAATTAT 57.922 37.500 0.00 0.00 35.76 1.28
17 18 5.512942 TCCAGGTGAATGAGACCAAATTA 57.487 39.130 0.00 0.00 35.76 1.40
18 19 4.387026 TCCAGGTGAATGAGACCAAATT 57.613 40.909 0.00 0.00 35.76 1.82
19 20 4.387026 TTCCAGGTGAATGAGACCAAAT 57.613 40.909 0.00 0.00 35.76 2.32
20 21 3.874383 TTCCAGGTGAATGAGACCAAA 57.126 42.857 0.00 0.00 35.76 3.28
21 22 3.874383 TTTCCAGGTGAATGAGACCAA 57.126 42.857 0.00 0.00 35.76 3.67
22 23 3.117701 TGTTTTCCAGGTGAATGAGACCA 60.118 43.478 0.00 0.00 35.76 4.02
23 24 3.486383 TGTTTTCCAGGTGAATGAGACC 58.514 45.455 0.00 0.00 31.67 3.85
24 25 5.514274 TTTGTTTTCCAGGTGAATGAGAC 57.486 39.130 0.00 0.00 31.67 3.36
25 26 6.071108 TGTTTTTGTTTTCCAGGTGAATGAGA 60.071 34.615 0.00 0.00 31.67 3.27
26 27 6.105333 TGTTTTTGTTTTCCAGGTGAATGAG 58.895 36.000 0.00 0.00 31.67 2.90
27 28 6.042638 TGTTTTTGTTTTCCAGGTGAATGA 57.957 33.333 0.00 0.00 31.67 2.57
28 29 6.105333 TCTGTTTTTGTTTTCCAGGTGAATG 58.895 36.000 0.00 0.00 31.67 2.67
29 30 6.293004 TCTGTTTTTGTTTTCCAGGTGAAT 57.707 33.333 0.00 0.00 31.67 2.57
30 31 5.730296 TCTGTTTTTGTTTTCCAGGTGAA 57.270 34.783 0.00 0.00 0.00 3.18
31 32 5.930837 ATCTGTTTTTGTTTTCCAGGTGA 57.069 34.783 0.00 0.00 0.00 4.02
32 33 6.568869 TGTATCTGTTTTTGTTTTCCAGGTG 58.431 36.000 0.00 0.00 0.00 4.00
33 34 6.783708 TGTATCTGTTTTTGTTTTCCAGGT 57.216 33.333 0.00 0.00 0.00 4.00
34 35 6.478673 GGTTGTATCTGTTTTTGTTTTCCAGG 59.521 38.462 0.00 0.00 0.00 4.45
35 36 6.478673 GGGTTGTATCTGTTTTTGTTTTCCAG 59.521 38.462 0.00 0.00 0.00 3.86
36 37 6.070767 TGGGTTGTATCTGTTTTTGTTTTCCA 60.071 34.615 0.00 0.00 0.00 3.53
37 38 6.256975 GTGGGTTGTATCTGTTTTTGTTTTCC 59.743 38.462 0.00 0.00 0.00 3.13
38 39 6.020201 CGTGGGTTGTATCTGTTTTTGTTTTC 60.020 38.462 0.00 0.00 0.00 2.29
39 40 5.808030 CGTGGGTTGTATCTGTTTTTGTTTT 59.192 36.000 0.00 0.00 0.00 2.43
40 41 5.105675 ACGTGGGTTGTATCTGTTTTTGTTT 60.106 36.000 0.00 0.00 0.00 2.83
41 42 4.399934 ACGTGGGTTGTATCTGTTTTTGTT 59.600 37.500 0.00 0.00 0.00 2.83
42 43 3.949113 ACGTGGGTTGTATCTGTTTTTGT 59.051 39.130 0.00 0.00 0.00 2.83
43 44 4.035792 TGACGTGGGTTGTATCTGTTTTTG 59.964 41.667 0.00 0.00 0.00 2.44
44 45 4.200874 TGACGTGGGTTGTATCTGTTTTT 58.799 39.130 0.00 0.00 0.00 1.94
45 46 3.811083 TGACGTGGGTTGTATCTGTTTT 58.189 40.909 0.00 0.00 0.00 2.43
46 47 3.399330 CTGACGTGGGTTGTATCTGTTT 58.601 45.455 0.00 0.00 0.00 2.83
47 48 2.870435 GCTGACGTGGGTTGTATCTGTT 60.870 50.000 0.00 0.00 0.00 3.16
48 49 1.337823 GCTGACGTGGGTTGTATCTGT 60.338 52.381 0.00 0.00 0.00 3.41
49 50 1.337728 TGCTGACGTGGGTTGTATCTG 60.338 52.381 0.00 0.00 0.00 2.90
50 51 0.973632 TGCTGACGTGGGTTGTATCT 59.026 50.000 0.00 0.00 0.00 1.98
51 52 1.076332 GTGCTGACGTGGGTTGTATC 58.924 55.000 0.00 0.00 0.00 2.24
52 53 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
53 54 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
54 55 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
55 56 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
56 57 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
57 58 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
58 59 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
59 60 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
60 61 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
61 62 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
62 63 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
63 64 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
64 65 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
65 66 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
66 67 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
67 68 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
68 69 4.801147 AATGCTATAAGATGCGTGTGTG 57.199 40.909 0.00 0.00 0.00 3.82
69 70 5.356426 TGTAATGCTATAAGATGCGTGTGT 58.644 37.500 0.00 0.00 0.00 3.72
70 71 5.905480 TGTAATGCTATAAGATGCGTGTG 57.095 39.130 0.00 0.00 0.00 3.82
71 72 5.639506 GGATGTAATGCTATAAGATGCGTGT 59.360 40.000 0.00 0.00 0.00 4.49
72 73 5.639082 TGGATGTAATGCTATAAGATGCGTG 59.361 40.000 0.00 0.00 34.76 5.34
73 74 5.793817 TGGATGTAATGCTATAAGATGCGT 58.206 37.500 0.00 0.00 34.76 5.24
74 75 6.726258 TTGGATGTAATGCTATAAGATGCG 57.274 37.500 0.00 0.00 34.76 4.73
75 76 7.478322 CCATTGGATGTAATGCTATAAGATGC 58.522 38.462 0.00 0.00 36.86 3.91
76 77 7.338703 AGCCATTGGATGTAATGCTATAAGATG 59.661 37.037 6.95 0.00 36.86 2.90
77 78 7.408543 AGCCATTGGATGTAATGCTATAAGAT 58.591 34.615 6.95 0.00 36.86 2.40
78 79 6.782986 AGCCATTGGATGTAATGCTATAAGA 58.217 36.000 6.95 0.00 36.86 2.10
79 80 8.743085 ATAGCCATTGGATGTAATGCTATAAG 57.257 34.615 6.95 0.00 36.61 1.73
82 83 9.532494 TTTTATAGCCATTGGATGTAATGCTAT 57.468 29.630 10.43 7.69 38.84 2.97
83 84 8.932434 TTTTATAGCCATTGGATGTAATGCTA 57.068 30.769 10.43 1.09 36.86 3.49
84 85 7.838079 TTTTATAGCCATTGGATGTAATGCT 57.162 32.000 10.43 0.00 36.86 3.79
85 86 8.143835 ACTTTTTATAGCCATTGGATGTAATGC 58.856 33.333 10.43 0.00 36.86 3.56
86 87 9.467258 CACTTTTTATAGCCATTGGATGTAATG 57.533 33.333 10.43 3.43 37.70 1.90
87 88 9.420118 TCACTTTTTATAGCCATTGGATGTAAT 57.580 29.630 10.43 0.00 26.05 1.89
88 89 8.815565 TCACTTTTTATAGCCATTGGATGTAA 57.184 30.769 6.95 6.46 0.00 2.41
89 90 8.815565 TTCACTTTTTATAGCCATTGGATGTA 57.184 30.769 6.95 0.00 0.00 2.29
90 91 7.716799 TTCACTTTTTATAGCCATTGGATGT 57.283 32.000 6.95 0.10 0.00 3.06
91 92 8.415553 TCATTCACTTTTTATAGCCATTGGATG 58.584 33.333 6.95 0.00 0.00 3.51
92 93 8.537728 TCATTCACTTTTTATAGCCATTGGAT 57.462 30.769 6.95 1.78 0.00 3.41
93 94 7.833682 TCTCATTCACTTTTTATAGCCATTGGA 59.166 33.333 6.95 0.00 0.00 3.53
94 95 7.917505 GTCTCATTCACTTTTTATAGCCATTGG 59.082 37.037 0.00 0.00 0.00 3.16
95 96 7.917505 GGTCTCATTCACTTTTTATAGCCATTG 59.082 37.037 0.00 0.00 0.00 2.82
96 97 7.615365 TGGTCTCATTCACTTTTTATAGCCATT 59.385 33.333 0.00 0.00 0.00 3.16
97 98 7.118723 TGGTCTCATTCACTTTTTATAGCCAT 58.881 34.615 0.00 0.00 0.00 4.40
98 99 6.480763 TGGTCTCATTCACTTTTTATAGCCA 58.519 36.000 0.00 0.00 0.00 4.75
99 100 7.391148 TTGGTCTCATTCACTTTTTATAGCC 57.609 36.000 0.00 0.00 0.00 3.93
100 101 9.860898 AATTTGGTCTCATTCACTTTTTATAGC 57.139 29.630 0.00 0.00 0.00 2.97
138 139 9.507329 TTTTATCAGTTTTGCTAGAACTCATCT 57.493 29.630 0.00 0.00 42.48 2.90
162 163 8.356657 TCTATTTGACAACAATCGACCATTTTT 58.643 29.630 0.00 0.00 35.85 1.94
166 167 7.447374 TTTCTATTTGACAACAATCGACCAT 57.553 32.000 0.00 0.00 35.85 3.55
169 170 8.555166 TGTTTTTCTATTTGACAACAATCGAC 57.445 30.769 0.00 0.00 35.85 4.20
177 178 8.001881 TGGTTAGCTGTTTTTCTATTTGACAA 57.998 30.769 0.00 0.00 0.00 3.18
181 182 9.353999 GGTTATGGTTAGCTGTTTTTCTATTTG 57.646 33.333 0.00 0.00 0.00 2.32
185 186 6.431852 GGTGGTTATGGTTAGCTGTTTTTCTA 59.568 38.462 0.00 0.00 0.00 2.10
186 187 5.243060 GGTGGTTATGGTTAGCTGTTTTTCT 59.757 40.000 0.00 0.00 0.00 2.52
211 212 6.890979 TGTACCATTGTGATTTGTGATTGA 57.109 33.333 0.00 0.00 0.00 2.57
249 250 4.202441 ACATGCAGATCAAGTATGGTTCC 58.798 43.478 16.45 0.00 34.02 3.62
261 262 2.515926 TCGGAAGCTACATGCAGATC 57.484 50.000 0.00 0.00 45.94 2.75
294 298 6.540914 TCGGTCTCTGTTTCAATTTTACACTT 59.459 34.615 0.00 0.00 0.00 3.16
355 359 2.289547 TCCAAAGCTTTTTCGAAGTCGG 59.710 45.455 9.53 4.51 40.29 4.79
375 381 1.134694 GTCCATCTTGCGCCGTTTC 59.865 57.895 4.18 0.00 0.00 2.78
388 394 4.202264 ACTTTTCTCTCGACTTGTGTCCAT 60.202 41.667 0.00 0.00 39.94 3.41
456 876 7.609760 ACATTATTGCTCATTTAACAGTCGA 57.390 32.000 0.00 0.00 0.00 4.20
461 881 8.801299 TCTGGAAACATTATTGCTCATTTAACA 58.199 29.630 0.00 0.00 41.51 2.41
493 913 5.220605 GGTTATACGACTCACTTGATTTGCC 60.221 44.000 0.00 0.00 0.00 4.52
497 917 5.571784 TCGGTTATACGACTCACTTGATT 57.428 39.130 0.00 0.00 38.06 2.57
533 953 1.234821 TCCACCGTGCTTTTGATGTC 58.765 50.000 0.00 0.00 0.00 3.06
903 1335 4.222124 AGAGAAGGTCTTGTTGTTGTGT 57.778 40.909 0.00 0.00 27.07 3.72
912 1344 4.277423 GGTAGCTAGCTAGAGAAGGTCTTG 59.723 50.000 24.78 0.00 36.64 3.02
957 1389 1.843734 GCCGATCTCCTCGTCTACGG 61.844 65.000 2.24 0.00 46.18 4.02
1009 1448 1.990614 GGAGAAGGAGAAGCCCGGT 60.991 63.158 0.00 0.00 37.37 5.28
1017 1456 2.055042 GCAGCCGAGGAGAAGGAGA 61.055 63.158 0.00 0.00 0.00 3.71
1103 1542 1.745489 GGAAAGGCAGGGTAGCACG 60.745 63.158 0.00 0.00 35.83 5.34
1104 1543 0.909623 TAGGAAAGGCAGGGTAGCAC 59.090 55.000 0.00 0.00 35.83 4.40
1105 1544 0.909623 GTAGGAAAGGCAGGGTAGCA 59.090 55.000 0.00 0.00 35.83 3.49
1106 1545 0.180642 GGTAGGAAAGGCAGGGTAGC 59.819 60.000 0.00 0.00 0.00 3.58
1107 1546 1.486726 CTGGTAGGAAAGGCAGGGTAG 59.513 57.143 0.00 0.00 0.00 3.18
1108 1547 1.580059 CTGGTAGGAAAGGCAGGGTA 58.420 55.000 0.00 0.00 0.00 3.69
1109 1548 1.853250 GCTGGTAGGAAAGGCAGGGT 61.853 60.000 0.00 0.00 0.00 4.34
1111 1550 0.038166 TTGCTGGTAGGAAAGGCAGG 59.962 55.000 0.00 0.00 34.37 4.85
1112 1551 1.747355 CATTGCTGGTAGGAAAGGCAG 59.253 52.381 0.00 0.00 34.37 4.85
1113 1552 1.616725 CCATTGCTGGTAGGAAAGGCA 60.617 52.381 0.00 0.00 37.79 4.75
1114 1553 1.106285 CCATTGCTGGTAGGAAAGGC 58.894 55.000 0.00 0.00 37.79 4.35
1115 1554 1.106285 GCCATTGCTGGTAGGAAAGG 58.894 55.000 0.77 0.77 45.10 3.11
1117 1556 0.037590 ACGCCATTGCTGGTAGGAAA 59.962 50.000 0.00 0.00 45.10 3.13
1118 1557 0.037590 AACGCCATTGCTGGTAGGAA 59.962 50.000 0.00 0.00 45.10 3.36
1149 1605 5.000591 TCACAAAACAAACAGTCAGAGACA 58.999 37.500 0.00 0.00 34.60 3.41
1151 1607 5.879777 TCATCACAAAACAAACAGTCAGAGA 59.120 36.000 0.00 0.00 0.00 3.10
1152 1608 6.122850 TCATCACAAAACAAACAGTCAGAG 57.877 37.500 0.00 0.00 0.00 3.35
1158 1623 6.275335 ACCTTCATCATCACAAAACAAACAG 58.725 36.000 0.00 0.00 0.00 3.16
1743 4169 0.456142 GTCACGCACGATGACTAGCA 60.456 55.000 14.32 0.00 42.68 3.49
1797 4226 0.538057 TGTCTGCCAAGAGCCAAAGG 60.538 55.000 0.00 0.00 42.71 3.11
2226 4655 1.757340 GGGGATCTCGACCTTCCGT 60.757 63.158 0.00 0.00 0.00 4.69
2598 5045 2.687200 CCGTGGAGGTGGATGGGA 60.687 66.667 0.00 0.00 34.51 4.37
2835 5282 2.836360 TCGCCATACCCGTCCTCC 60.836 66.667 0.00 0.00 0.00 4.30
3152 5603 7.360113 TGAGTACTGGCTAATCAATGATGTA 57.640 36.000 0.00 0.00 0.00 2.29
3241 5692 2.423185 CGGGCATTTGCTCAGTTCAATA 59.577 45.455 2.94 0.00 43.04 1.90
3281 5735 3.801114 ACGTAGATGTAGCATTGCTCA 57.199 42.857 15.81 13.12 40.44 4.26
3282 5736 6.771188 AATTACGTAGATGTAGCATTGCTC 57.229 37.500 15.81 7.72 40.44 4.26
3283 5737 7.434492 AGTAATTACGTAGATGTAGCATTGCT 58.566 34.615 16.63 16.63 43.41 3.91
3284 5738 7.639162 AGTAATTACGTAGATGTAGCATTGC 57.361 36.000 9.91 0.00 0.00 3.56
3303 5757 9.815936 GCTGTTACATAAAACACGTAAAGTAAT 57.184 29.630 0.00 0.00 35.56 1.89
3304 5758 8.824781 TGCTGTTACATAAAACACGTAAAGTAA 58.175 29.630 0.00 0.00 35.56 2.24
3305 5759 8.362860 TGCTGTTACATAAAACACGTAAAGTA 57.637 30.769 0.00 0.00 35.56 2.24
3306 5760 7.249186 TGCTGTTACATAAAACACGTAAAGT 57.751 32.000 0.00 0.00 35.56 2.66
3307 5761 8.466026 GTTTGCTGTTACATAAAACACGTAAAG 58.534 33.333 14.23 0.00 35.56 1.85
3308 5762 7.163845 CGTTTGCTGTTACATAAAACACGTAAA 59.836 33.333 17.27 1.72 35.56 2.01
3309 5763 6.628065 CGTTTGCTGTTACATAAAACACGTAA 59.372 34.615 17.27 0.00 35.56 3.18
3310 5764 6.128066 CGTTTGCTGTTACATAAAACACGTA 58.872 36.000 17.27 0.00 35.56 3.57
3311 5765 4.965158 CGTTTGCTGTTACATAAAACACGT 59.035 37.500 17.27 0.00 35.56 4.49
3312 5766 4.965158 ACGTTTGCTGTTACATAAAACACG 59.035 37.500 17.27 10.89 35.56 4.49
3313 5767 5.172411 CCACGTTTGCTGTTACATAAAACAC 59.828 40.000 17.27 0.52 35.56 3.32
3314 5768 5.274718 CCACGTTTGCTGTTACATAAAACA 58.725 37.500 17.27 0.76 37.75 2.83
3315 5769 4.147479 GCCACGTTTGCTGTTACATAAAAC 59.853 41.667 10.91 10.91 0.00 2.43
3316 5770 4.202020 TGCCACGTTTGCTGTTACATAAAA 60.202 37.500 8.18 0.00 0.00 1.52
3317 5771 3.315470 TGCCACGTTTGCTGTTACATAAA 59.685 39.130 8.18 0.00 0.00 1.40
3318 5772 2.879026 TGCCACGTTTGCTGTTACATAA 59.121 40.909 8.18 0.00 0.00 1.90
3319 5773 2.495084 TGCCACGTTTGCTGTTACATA 58.505 42.857 8.18 0.00 0.00 2.29
3320 5774 1.313772 TGCCACGTTTGCTGTTACAT 58.686 45.000 8.18 0.00 0.00 2.29
3321 5775 1.064803 CTTGCCACGTTTGCTGTTACA 59.935 47.619 8.18 0.00 0.00 2.41
3322 5776 1.064952 ACTTGCCACGTTTGCTGTTAC 59.935 47.619 8.18 0.00 0.00 2.50
3323 5777 1.064803 CACTTGCCACGTTTGCTGTTA 59.935 47.619 8.18 0.00 0.00 2.41
3324 5778 0.179140 CACTTGCCACGTTTGCTGTT 60.179 50.000 8.18 0.00 0.00 3.16
3325 5779 1.029408 TCACTTGCCACGTTTGCTGT 61.029 50.000 8.18 4.79 0.00 4.40
3326 5780 0.317269 CTCACTTGCCACGTTTGCTG 60.317 55.000 8.18 4.26 0.00 4.41
3327 5781 1.447317 CCTCACTTGCCACGTTTGCT 61.447 55.000 8.18 0.00 0.00 3.91
3328 5782 1.008538 CCTCACTTGCCACGTTTGC 60.009 57.895 0.00 0.00 0.00 3.68
3329 5783 1.238439 ATCCTCACTTGCCACGTTTG 58.762 50.000 0.00 0.00 0.00 2.93
3330 5784 1.608590 CAATCCTCACTTGCCACGTTT 59.391 47.619 0.00 0.00 0.00 3.60
3331 5785 1.238439 CAATCCTCACTTGCCACGTT 58.762 50.000 0.00 0.00 0.00 3.99
3332 5786 0.606401 CCAATCCTCACTTGCCACGT 60.606 55.000 0.00 0.00 0.00 4.49
3333 5787 1.308069 CCCAATCCTCACTTGCCACG 61.308 60.000 0.00 0.00 0.00 4.94
3334 5788 0.967380 CCCCAATCCTCACTTGCCAC 60.967 60.000 0.00 0.00 0.00 5.01
3335 5789 1.139498 TCCCCAATCCTCACTTGCCA 61.139 55.000 0.00 0.00 0.00 4.92
3336 5790 0.259938 ATCCCCAATCCTCACTTGCC 59.740 55.000 0.00 0.00 0.00 4.52
3337 5791 1.396653 CATCCCCAATCCTCACTTGC 58.603 55.000 0.00 0.00 0.00 4.01
3338 5792 1.410648 CCCATCCCCAATCCTCACTTG 60.411 57.143 0.00 0.00 0.00 3.16
3339 5793 0.929244 CCCATCCCCAATCCTCACTT 59.071 55.000 0.00 0.00 0.00 3.16
3340 5794 0.046242 TCCCATCCCCAATCCTCACT 59.954 55.000 0.00 0.00 0.00 3.41
3341 5795 0.926293 TTCCCATCCCCAATCCTCAC 59.074 55.000 0.00 0.00 0.00 3.51
3342 5796 1.225373 CTTCCCATCCCCAATCCTCA 58.775 55.000 0.00 0.00 0.00 3.86
3343 5797 1.423161 CTCTTCCCATCCCCAATCCTC 59.577 57.143 0.00 0.00 0.00 3.71
3344 5798 1.527457 CTCTTCCCATCCCCAATCCT 58.473 55.000 0.00 0.00 0.00 3.24
3345 5799 0.480252 CCTCTTCCCATCCCCAATCC 59.520 60.000 0.00 0.00 0.00 3.01
3346 5800 1.522900 TCCTCTTCCCATCCCCAATC 58.477 55.000 0.00 0.00 0.00 2.67
3347 5801 1.855599 CTTCCTCTTCCCATCCCCAAT 59.144 52.381 0.00 0.00 0.00 3.16
3348 5802 1.298953 CTTCCTCTTCCCATCCCCAA 58.701 55.000 0.00 0.00 0.00 4.12
3349 5803 0.624500 CCTTCCTCTTCCCATCCCCA 60.625 60.000 0.00 0.00 0.00 4.96
3350 5804 1.356494 CCCTTCCTCTTCCCATCCCC 61.356 65.000 0.00 0.00 0.00 4.81
3351 5805 1.356494 CCCCTTCCTCTTCCCATCCC 61.356 65.000 0.00 0.00 0.00 3.85
3352 5806 2.000825 GCCCCTTCCTCTTCCCATCC 62.001 65.000 0.00 0.00 0.00 3.51
3353 5807 1.534203 GCCCCTTCCTCTTCCCATC 59.466 63.158 0.00 0.00 0.00 3.51
3354 5808 2.009302 GGCCCCTTCCTCTTCCCAT 61.009 63.158 0.00 0.00 0.00 4.00
3355 5809 2.614013 GGCCCCTTCCTCTTCCCA 60.614 66.667 0.00 0.00 0.00 4.37
3356 5810 3.421386 GGGCCCCTTCCTCTTCCC 61.421 72.222 12.23 0.00 0.00 3.97
3357 5811 2.614013 TGGGCCCCTTCCTCTTCC 60.614 66.667 22.27 0.00 0.00 3.46
3358 5812 2.677848 GTGGGCCCCTTCCTCTTC 59.322 66.667 22.27 0.00 0.00 2.87
3359 5813 2.941583 GGTGGGCCCCTTCCTCTT 60.942 66.667 22.27 0.00 0.00 2.85
3369 5823 1.128200 GATTTTAATGGGGGTGGGCC 58.872 55.000 0.00 0.00 0.00 5.80
3370 5824 1.762370 CTGATTTTAATGGGGGTGGGC 59.238 52.381 0.00 0.00 0.00 5.36
3371 5825 2.397597 CCTGATTTTAATGGGGGTGGG 58.602 52.381 0.00 0.00 0.00 4.61
3372 5826 2.397597 CCCTGATTTTAATGGGGGTGG 58.602 52.381 0.00 0.00 36.15 4.61
3391 5845 3.904965 CCTAATCTAAACCTCTCTCCCCC 59.095 52.174 0.00 0.00 0.00 5.40
3392 5846 4.817286 TCCTAATCTAAACCTCTCTCCCC 58.183 47.826 0.00 0.00 0.00 4.81
3393 5847 5.900699 ACTTCCTAATCTAAACCTCTCTCCC 59.099 44.000 0.00 0.00 0.00 4.30
3394 5848 7.426606 AACTTCCTAATCTAAACCTCTCTCC 57.573 40.000 0.00 0.00 0.00 3.71
3395 5849 9.806203 GTAAACTTCCTAATCTAAACCTCTCTC 57.194 37.037 0.00 0.00 0.00 3.20
3396 5850 8.468399 CGTAAACTTCCTAATCTAAACCTCTCT 58.532 37.037 0.00 0.00 0.00 3.10
3397 5851 8.249638 ACGTAAACTTCCTAATCTAAACCTCTC 58.750 37.037 0.00 0.00 0.00 3.20
3398 5852 8.131847 ACGTAAACTTCCTAATCTAAACCTCT 57.868 34.615 0.00 0.00 0.00 3.69
3399 5853 9.860898 TTACGTAAACTTCCTAATCTAAACCTC 57.139 33.333 5.31 0.00 0.00 3.85
3400 5854 9.645059 GTTACGTAAACTTCCTAATCTAAACCT 57.355 33.333 10.11 0.00 35.05 3.50
3401 5855 9.645059 AGTTACGTAAACTTCCTAATCTAAACC 57.355 33.333 10.11 0.00 46.61 3.27
3424 5878 9.034544 CACCTACTTAAACAACTACGTAAAGTT 57.965 33.333 10.78 5.07 40.33 2.66
3425 5879 8.197439 ACACCTACTTAAACAACTACGTAAAGT 58.803 33.333 10.45 10.45 32.80 2.66
3426 5880 8.579682 ACACCTACTTAAACAACTACGTAAAG 57.420 34.615 0.00 0.00 0.00 1.85
3427 5881 9.677567 CTACACCTACTTAAACAACTACGTAAA 57.322 33.333 0.00 0.00 0.00 2.01
3428 5882 8.846211 ACTACACCTACTTAAACAACTACGTAA 58.154 33.333 0.00 0.00 0.00 3.18
3429 5883 8.391075 ACTACACCTACTTAAACAACTACGTA 57.609 34.615 0.00 0.00 0.00 3.57
3430 5884 7.277174 ACTACACCTACTTAAACAACTACGT 57.723 36.000 0.00 0.00 0.00 3.57
3431 5885 9.846248 AATACTACACCTACTTAAACAACTACG 57.154 33.333 0.00 0.00 0.00 3.51
3456 5910 9.425577 TGAACGAGTTGTATGTGTAATCAATAA 57.574 29.630 0.00 0.00 0.00 1.40
3457 5911 8.989653 TGAACGAGTTGTATGTGTAATCAATA 57.010 30.769 0.00 0.00 0.00 1.90
3458 5912 7.899178 TGAACGAGTTGTATGTGTAATCAAT 57.101 32.000 0.00 0.00 0.00 2.57
3459 5913 7.224949 TGTTGAACGAGTTGTATGTGTAATCAA 59.775 33.333 0.00 0.00 0.00 2.57
3460 5914 6.702282 TGTTGAACGAGTTGTATGTGTAATCA 59.298 34.615 0.00 0.00 0.00 2.57
3461 5915 7.007697 GTGTTGAACGAGTTGTATGTGTAATC 58.992 38.462 0.00 0.00 0.00 1.75
3462 5916 6.480651 TGTGTTGAACGAGTTGTATGTGTAAT 59.519 34.615 0.00 0.00 0.00 1.89
3463 5917 5.811100 TGTGTTGAACGAGTTGTATGTGTAA 59.189 36.000 0.00 0.00 0.00 2.41
3464 5918 5.349809 TGTGTTGAACGAGTTGTATGTGTA 58.650 37.500 0.00 0.00 0.00 2.90
3465 5919 4.185394 TGTGTTGAACGAGTTGTATGTGT 58.815 39.130 0.00 0.00 0.00 3.72
3466 5920 4.787381 TGTGTTGAACGAGTTGTATGTG 57.213 40.909 0.00 0.00 0.00 3.21
3467 5921 7.011576 TGTTATTGTGTTGAACGAGTTGTATGT 59.988 33.333 0.00 0.00 0.00 2.29
3468 5922 7.348956 TGTTATTGTGTTGAACGAGTTGTATG 58.651 34.615 0.00 0.00 0.00 2.39
3469 5923 7.485418 TGTTATTGTGTTGAACGAGTTGTAT 57.515 32.000 0.00 0.00 0.00 2.29
3470 5924 6.905544 TGTTATTGTGTTGAACGAGTTGTA 57.094 33.333 0.00 0.00 0.00 2.41
3545 6009 5.137551 TCATGGATGACGGTATACTCTTCA 58.862 41.667 2.25 3.75 0.00 3.02
3621 6086 0.098728 CGCACGGGCAATTTTCCTAG 59.901 55.000 11.77 0.00 41.24 3.02
3622 6087 0.606944 ACGCACGGGCAATTTTCCTA 60.607 50.000 11.77 0.00 41.24 2.94
3623 6088 1.460273 AACGCACGGGCAATTTTCCT 61.460 50.000 11.77 0.00 41.24 3.36
3624 6089 1.006688 AACGCACGGGCAATTTTCC 60.007 52.632 11.77 0.00 41.24 3.13
3625 6090 1.885814 GCAACGCACGGGCAATTTTC 61.886 55.000 11.77 0.00 41.24 2.29
3626 6091 1.953642 GCAACGCACGGGCAATTTT 60.954 52.632 11.77 0.00 41.24 1.82
3627 6092 2.355718 GCAACGCACGGGCAATTT 60.356 55.556 11.77 0.00 41.24 1.82
3628 6093 3.144120 TTGCAACGCACGGGCAATT 62.144 52.632 11.77 0.00 42.12 2.32
3629 6094 3.600694 TTGCAACGCACGGGCAAT 61.601 55.556 11.77 0.00 42.12 3.56
3630 6095 4.560856 GTTGCAACGCACGGGCAA 62.561 61.111 14.90 16.74 44.50 4.52
3640 6105 0.521735 GTTGGATCTCCCGTTGCAAC 59.478 55.000 19.89 19.89 37.09 4.17
3641 6106 0.400213 AGTTGGATCTCCCGTTGCAA 59.600 50.000 0.00 0.00 37.93 4.08
3642 6107 1.271856 TAGTTGGATCTCCCGTTGCA 58.728 50.000 0.00 0.00 37.93 4.08
3643 6108 2.622064 ATAGTTGGATCTCCCGTTGC 57.378 50.000 0.00 0.00 37.93 4.17
3644 6109 5.671493 ACTTTATAGTTGGATCTCCCGTTG 58.329 41.667 0.00 0.00 37.93 4.10
3645 6110 5.952347 ACTTTATAGTTGGATCTCCCGTT 57.048 39.130 0.00 0.00 37.93 4.44
3646 6111 6.134754 AGTACTTTATAGTTGGATCTCCCGT 58.865 40.000 0.00 0.00 35.10 5.28
3647 6112 6.651975 AGTACTTTATAGTTGGATCTCCCG 57.348 41.667 0.00 0.00 35.10 5.14
3648 6113 9.310449 TGATAGTACTTTATAGTTGGATCTCCC 57.690 37.037 0.00 0.00 35.78 4.30
3663 6128 8.031864 CCATTCTCGCTATCATGATAGTACTTT 58.968 37.037 33.06 17.46 42.07 2.66
3664 6129 7.363355 CCCATTCTCGCTATCATGATAGTACTT 60.363 40.741 33.06 17.04 42.07 2.24
3665 6130 6.096141 CCCATTCTCGCTATCATGATAGTACT 59.904 42.308 33.06 16.11 42.07 2.73
3666 6131 6.269315 CCCATTCTCGCTATCATGATAGTAC 58.731 44.000 33.06 21.34 42.07 2.73
3667 6132 5.163509 GCCCATTCTCGCTATCATGATAGTA 60.164 44.000 33.06 23.73 42.07 1.82
3668 6133 4.382470 GCCCATTCTCGCTATCATGATAGT 60.382 45.833 33.06 16.82 42.07 2.12
3669 6134 4.118410 GCCCATTCTCGCTATCATGATAG 58.882 47.826 30.57 30.57 42.76 2.08
3670 6135 3.515104 TGCCCATTCTCGCTATCATGATA 59.485 43.478 14.64 14.64 0.00 2.15
3671 6136 2.303890 TGCCCATTCTCGCTATCATGAT 59.696 45.455 13.81 13.81 0.00 2.45
3672 6137 1.693606 TGCCCATTCTCGCTATCATGA 59.306 47.619 0.00 0.00 0.00 3.07
3673 6138 2.174363 TGCCCATTCTCGCTATCATG 57.826 50.000 0.00 0.00 0.00 3.07
3674 6139 2.936919 TTGCCCATTCTCGCTATCAT 57.063 45.000 0.00 0.00 0.00 2.45
3675 6140 2.708216 TTTGCCCATTCTCGCTATCA 57.292 45.000 0.00 0.00 0.00 2.15
3696 6161 9.878667 TGATATGCAATCATTTCATGTTTTCTT 57.121 25.926 0.00 0.00 36.29 2.52
3726 6191 3.678072 CAGGACGCAGATACGAAGAAAAA 59.322 43.478 0.00 0.00 36.70 1.94
3727 6192 3.250744 CAGGACGCAGATACGAAGAAAA 58.749 45.455 0.00 0.00 36.70 2.29
3728 6193 2.416836 CCAGGACGCAGATACGAAGAAA 60.417 50.000 0.00 0.00 36.70 2.52
3729 6194 1.134367 CCAGGACGCAGATACGAAGAA 59.866 52.381 0.00 0.00 36.70 2.52
3730 6195 0.738975 CCAGGACGCAGATACGAAGA 59.261 55.000 0.00 0.00 36.70 2.87
3731 6196 0.456221 ACCAGGACGCAGATACGAAG 59.544 55.000 0.00 0.00 36.70 3.79
3732 6197 0.892755 AACCAGGACGCAGATACGAA 59.107 50.000 0.00 0.00 36.70 3.85
3733 6198 0.172578 CAACCAGGACGCAGATACGA 59.827 55.000 0.00 0.00 36.70 3.43
3734 6199 0.108804 ACAACCAGGACGCAGATACG 60.109 55.000 0.00 0.00 39.50 3.06
3735 6200 1.067142 TGACAACCAGGACGCAGATAC 60.067 52.381 0.00 0.00 0.00 2.24
3736 6201 1.204704 CTGACAACCAGGACGCAGATA 59.795 52.381 0.00 0.00 39.23 1.98
3737 6202 0.036952 CTGACAACCAGGACGCAGAT 60.037 55.000 0.00 0.00 39.23 2.90
3738 6203 1.367471 CTGACAACCAGGACGCAGA 59.633 57.895 0.00 0.00 39.23 4.26
3739 6204 2.320587 GCTGACAACCAGGACGCAG 61.321 63.158 0.00 0.00 43.13 5.18
3740 6205 2.280797 GCTGACAACCAGGACGCA 60.281 61.111 0.00 0.00 43.13 5.24
3741 6206 1.166531 AAAGCTGACAACCAGGACGC 61.167 55.000 0.00 0.00 43.13 5.19
3742 6207 1.308998 AAAAGCTGACAACCAGGACG 58.691 50.000 0.00 0.00 43.13 4.79
3743 6208 2.814336 CCTAAAAGCTGACAACCAGGAC 59.186 50.000 0.00 0.00 43.13 3.85
3744 6209 2.814097 GCCTAAAAGCTGACAACCAGGA 60.814 50.000 0.00 0.00 43.13 3.86
3745 6210 1.541588 GCCTAAAAGCTGACAACCAGG 59.458 52.381 0.00 0.00 43.13 4.45
3746 6211 2.229792 TGCCTAAAAGCTGACAACCAG 58.770 47.619 0.00 0.00 45.67 4.00
3747 6212 2.356665 TGCCTAAAAGCTGACAACCA 57.643 45.000 0.00 0.00 0.00 3.67
3748 6213 2.672195 GCATGCCTAAAAGCTGACAACC 60.672 50.000 6.36 0.00 0.00 3.77
3749 6214 2.030007 TGCATGCCTAAAAGCTGACAAC 60.030 45.455 16.68 0.00 0.00 3.32
3750 6215 2.237643 TGCATGCCTAAAAGCTGACAA 58.762 42.857 16.68 0.00 0.00 3.18
3751 6216 1.908344 TGCATGCCTAAAAGCTGACA 58.092 45.000 16.68 0.00 0.00 3.58
3752 6217 2.805845 CATGCATGCCTAAAAGCTGAC 58.194 47.619 14.93 0.00 0.00 3.51
3773 6238 3.355626 TCAAGATCTTAGGCGATGACG 57.644 47.619 7.86 0.00 42.93 4.35
3774 6239 6.019779 ACTATCAAGATCTTAGGCGATGAC 57.980 41.667 7.86 0.00 0.00 3.06
3775 6240 7.761038 TTACTATCAAGATCTTAGGCGATGA 57.239 36.000 7.86 0.11 0.00 2.92
3776 6241 7.704472 GGATTACTATCAAGATCTTAGGCGATG 59.296 40.741 7.86 4.96 32.09 3.84
3777 6242 7.415765 CGGATTACTATCAAGATCTTAGGCGAT 60.416 40.741 7.86 9.21 32.09 4.58
3778 6243 6.127980 CGGATTACTATCAAGATCTTAGGCGA 60.128 42.308 7.86 1.40 32.09 5.54
3779 6244 6.030849 CGGATTACTATCAAGATCTTAGGCG 58.969 44.000 7.86 0.00 32.09 5.52
3780 6245 5.808030 GCGGATTACTATCAAGATCTTAGGC 59.192 44.000 7.86 0.00 32.09 3.93
3781 6246 6.153680 AGGCGGATTACTATCAAGATCTTAGG 59.846 42.308 7.86 0.00 32.09 2.69
3782 6247 7.164230 AGGCGGATTACTATCAAGATCTTAG 57.836 40.000 7.86 4.89 32.09 2.18
3783 6248 7.540474 AAGGCGGATTACTATCAAGATCTTA 57.460 36.000 7.86 0.00 32.09 2.10
3784 6249 6.426646 AAGGCGGATTACTATCAAGATCTT 57.573 37.500 0.88 0.88 32.09 2.40
3785 6250 6.350612 GCTAAGGCGGATTACTATCAAGATCT 60.351 42.308 0.00 0.00 32.09 2.75
3786 6251 5.808030 GCTAAGGCGGATTACTATCAAGATC 59.192 44.000 0.00 0.00 32.09 2.75
3787 6252 5.482175 AGCTAAGGCGGATTACTATCAAGAT 59.518 40.000 0.00 0.00 44.37 2.40
3788 6253 4.833380 AGCTAAGGCGGATTACTATCAAGA 59.167 41.667 0.00 0.00 44.37 3.02
3789 6254 5.140747 AGCTAAGGCGGATTACTATCAAG 57.859 43.478 0.00 0.00 44.37 3.02
3790 6255 4.021368 GGAGCTAAGGCGGATTACTATCAA 60.021 45.833 0.00 0.00 44.37 2.57
3791 6256 3.510360 GGAGCTAAGGCGGATTACTATCA 59.490 47.826 0.00 0.00 44.37 2.15
3792 6257 3.510360 TGGAGCTAAGGCGGATTACTATC 59.490 47.826 0.00 0.00 44.37 2.08
3793 6258 3.507411 TGGAGCTAAGGCGGATTACTAT 58.493 45.455 0.00 0.00 44.37 2.12
3794 6259 2.953453 TGGAGCTAAGGCGGATTACTA 58.047 47.619 0.00 0.00 44.37 1.82
3795 6260 1.789523 TGGAGCTAAGGCGGATTACT 58.210 50.000 0.00 0.00 44.37 2.24
3796 6261 2.037251 TGATGGAGCTAAGGCGGATTAC 59.963 50.000 0.00 0.00 44.37 1.89
3797 6262 2.325484 TGATGGAGCTAAGGCGGATTA 58.675 47.619 0.00 0.00 44.37 1.75
3798 6263 1.131638 TGATGGAGCTAAGGCGGATT 58.868 50.000 0.00 0.00 44.37 3.01
3799 6264 1.002888 CATGATGGAGCTAAGGCGGAT 59.997 52.381 0.00 0.00 44.37 4.18
3800 6265 0.394192 CATGATGGAGCTAAGGCGGA 59.606 55.000 0.00 0.00 44.37 5.54
3801 6266 0.394192 TCATGATGGAGCTAAGGCGG 59.606 55.000 0.00 0.00 44.37 6.13
3802 6267 2.141517 CTTCATGATGGAGCTAAGGCG 58.858 52.381 0.00 0.00 44.37 5.52
3803 6268 1.878734 GCTTCATGATGGAGCTAAGGC 59.121 52.381 18.33 0.00 39.06 4.35
3804 6269 2.502295 GGCTTCATGATGGAGCTAAGG 58.498 52.381 23.87 0.00 0.00 2.69
3805 6270 2.502295 GGGCTTCATGATGGAGCTAAG 58.498 52.381 23.87 6.10 0.00 2.18
3806 6271 1.202687 CGGGCTTCATGATGGAGCTAA 60.203 52.381 23.87 0.00 0.00 3.09
3807 6272 0.394192 CGGGCTTCATGATGGAGCTA 59.606 55.000 23.87 0.00 0.00 3.32
3808 6273 1.147824 CGGGCTTCATGATGGAGCT 59.852 57.895 23.87 0.00 0.00 4.09
3809 6274 1.895707 CCGGGCTTCATGATGGAGC 60.896 63.158 17.42 17.42 0.00 4.70
3810 6275 0.533755 GTCCGGGCTTCATGATGGAG 60.534 60.000 0.00 0.00 0.00 3.86
3811 6276 1.526887 GTCCGGGCTTCATGATGGA 59.473 57.895 0.00 4.31 0.00 3.41
3812 6277 1.889105 CGTCCGGGCTTCATGATGG 60.889 63.158 3.66 1.75 0.00 3.51
3813 6278 0.744414 AACGTCCGGGCTTCATGATG 60.744 55.000 3.66 0.00 0.00 3.07
3814 6279 0.462047 GAACGTCCGGGCTTCATGAT 60.462 55.000 3.66 0.00 0.00 2.45
3815 6280 1.079405 GAACGTCCGGGCTTCATGA 60.079 57.895 3.66 0.00 0.00 3.07
3816 6281 2.452813 CGAACGTCCGGGCTTCATG 61.453 63.158 3.66 0.00 0.00 3.07
3817 6282 2.125673 CGAACGTCCGGGCTTCAT 60.126 61.111 3.66 0.00 0.00 2.57
3818 6283 4.367023 CCGAACGTCCGGGCTTCA 62.367 66.667 4.80 0.00 45.43 3.02
3825 6290 3.110178 GGTGAAGCCGAACGTCCG 61.110 66.667 0.00 0.00 0.00 4.79
3834 6299 1.217882 CGATCCATTACGGTGAAGCC 58.782 55.000 0.00 0.00 35.57 4.35
3835 6300 1.217882 CCGATCCATTACGGTGAAGC 58.782 55.000 0.00 0.00 43.53 3.86
3842 6307 0.813610 TGCCTTGCCGATCCATTACG 60.814 55.000 0.00 0.00 0.00 3.18
3843 6308 1.267806 CATGCCTTGCCGATCCATTAC 59.732 52.381 0.00 0.00 0.00 1.89
3844 6309 1.142667 TCATGCCTTGCCGATCCATTA 59.857 47.619 0.00 0.00 0.00 1.90
3845 6310 0.106569 TCATGCCTTGCCGATCCATT 60.107 50.000 0.00 0.00 0.00 3.16
3846 6311 0.111832 ATCATGCCTTGCCGATCCAT 59.888 50.000 0.00 0.00 0.00 3.41
3847 6312 0.764271 TATCATGCCTTGCCGATCCA 59.236 50.000 0.00 0.00 0.00 3.41
3848 6313 1.446907 CTATCATGCCTTGCCGATCC 58.553 55.000 0.00 0.00 0.00 3.36
3849 6314 0.801251 GCTATCATGCCTTGCCGATC 59.199 55.000 0.00 0.00 0.00 3.69
3850 6315 0.399454 AGCTATCATGCCTTGCCGAT 59.601 50.000 0.00 0.00 0.00 4.18
3851 6316 0.181114 AAGCTATCATGCCTTGCCGA 59.819 50.000 0.00 0.00 0.00 5.54
3852 6317 0.590195 GAAGCTATCATGCCTTGCCG 59.410 55.000 0.00 0.00 0.00 5.69
3853 6318 0.590195 CGAAGCTATCATGCCTTGCC 59.410 55.000 0.00 0.00 0.00 4.52
3854 6319 0.590195 CCGAAGCTATCATGCCTTGC 59.410 55.000 0.00 0.00 0.00 4.01
3855 6320 1.600957 CACCGAAGCTATCATGCCTTG 59.399 52.381 0.00 0.00 0.00 3.61
3856 6321 1.486310 TCACCGAAGCTATCATGCCTT 59.514 47.619 0.00 0.00 0.00 4.35
3857 6322 1.069823 CTCACCGAAGCTATCATGCCT 59.930 52.381 0.00 0.00 0.00 4.75
3858 6323 1.506493 CTCACCGAAGCTATCATGCC 58.494 55.000 0.00 0.00 0.00 4.40
3859 6324 0.864455 GCTCACCGAAGCTATCATGC 59.136 55.000 0.00 0.00 39.27 4.06
3860 6325 1.135046 CGCTCACCGAAGCTATCATG 58.865 55.000 0.00 0.00 40.23 3.07
3861 6326 0.598680 GCGCTCACCGAAGCTATCAT 60.599 55.000 0.00 0.00 40.23 2.45
3862 6327 1.226974 GCGCTCACCGAAGCTATCA 60.227 57.895 0.00 0.00 40.23 2.15
3863 6328 0.598680 ATGCGCTCACCGAAGCTATC 60.599 55.000 9.73 0.00 40.23 2.08
3864 6329 0.877649 CATGCGCTCACCGAAGCTAT 60.878 55.000 9.73 0.00 40.23 2.97
3865 6330 1.519234 CATGCGCTCACCGAAGCTA 60.519 57.895 9.73 0.00 40.23 3.32
3866 6331 2.816958 CATGCGCTCACCGAAGCT 60.817 61.111 9.73 0.00 40.23 3.74
3867 6332 3.869272 CCATGCGCTCACCGAAGC 61.869 66.667 9.73 0.00 40.02 3.86
3868 6333 3.869272 GCCATGCGCTCACCGAAG 61.869 66.667 9.73 0.00 40.02 3.79
3871 6336 4.529219 TAGGCCATGCGCTCACCG 62.529 66.667 9.73 0.00 37.74 4.94
3872 6337 2.897350 GTAGGCCATGCGCTCACC 60.897 66.667 9.73 4.97 37.74 4.02
3873 6338 2.125147 TGTAGGCCATGCGCTCAC 60.125 61.111 9.73 0.00 37.74 3.51
3874 6339 2.187685 CTGTAGGCCATGCGCTCA 59.812 61.111 9.73 0.00 37.74 4.26
3875 6340 2.388890 ATCCTGTAGGCCATGCGCTC 62.389 60.000 9.73 0.00 37.74 5.03
3876 6341 2.446848 ATCCTGTAGGCCATGCGCT 61.447 57.895 9.73 0.00 37.74 5.92
3877 6342 2.111878 ATCCTGTAGGCCATGCGC 59.888 61.111 5.01 0.00 34.44 6.09
3878 6343 2.256591 GCATCCTGTAGGCCATGCG 61.257 63.158 5.01 0.00 36.24 4.73
3879 6344 3.755434 GCATCCTGTAGGCCATGC 58.245 61.111 5.01 6.62 37.96 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.