Multiple sequence alignment - TraesCS3D01G341100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G341100 | chr3D | 100.000 | 4120 | 0 | 0 | 1 | 4120 | 454507463 | 454511582 | 0.000000e+00 | 7609.0 |
1 | TraesCS3D01G341100 | chr3D | 96.694 | 242 | 6 | 2 | 3881 | 4120 | 430196350 | 430196109 | 6.420000e-108 | 401.0 |
2 | TraesCS3D01G341100 | chr3D | 84.746 | 59 | 7 | 2 | 2680 | 2737 | 337974306 | 337974249 | 1.600000e-04 | 58.4 |
3 | TraesCS3D01G341100 | chr3A | 91.010 | 3882 | 164 | 60 | 1 | 3843 | 596512916 | 596516651 | 0.000000e+00 | 5064.0 |
4 | TraesCS3D01G341100 | chr3A | 97.807 | 228 | 5 | 0 | 3893 | 4120 | 448654235 | 448654008 | 1.070000e-105 | 394.0 |
5 | TraesCS3D01G341100 | chr3A | 93.511 | 262 | 15 | 1 | 3180 | 3439 | 596546559 | 596546820 | 4.990000e-104 | 388.0 |
6 | TraesCS3D01G341100 | chr3A | 86.885 | 183 | 15 | 3 | 3513 | 3695 | 596546910 | 596547083 | 3.250000e-46 | 196.0 |
7 | TraesCS3D01G341100 | chr3B | 92.943 | 3486 | 173 | 32 | 1 | 3439 | 597086954 | 597090413 | 0.000000e+00 | 5007.0 |
8 | TraesCS3D01G341100 | chr3B | 79.714 | 419 | 44 | 15 | 3435 | 3845 | 597090495 | 597090880 | 8.780000e-67 | 265.0 |
9 | TraesCS3D01G341100 | chr3B | 85.484 | 62 | 9 | 0 | 2569 | 2630 | 379172678 | 379172739 | 9.560000e-07 | 65.8 |
10 | TraesCS3D01G341100 | chr5D | 99.127 | 229 | 2 | 0 | 3892 | 4120 | 242190922 | 242191150 | 2.960000e-111 | 412.0 |
11 | TraesCS3D01G341100 | chr5D | 75.904 | 166 | 38 | 2 | 1984 | 2148 | 472237771 | 472237935 | 2.640000e-12 | 84.2 |
12 | TraesCS3D01G341100 | chr2D | 98.283 | 233 | 4 | 0 | 3888 | 4120 | 32205648 | 32205880 | 3.830000e-110 | 409.0 |
13 | TraesCS3D01G341100 | chr2D | 97.872 | 235 | 4 | 1 | 3886 | 4120 | 301117862 | 301117629 | 4.960000e-109 | 405.0 |
14 | TraesCS3D01G341100 | chr2D | 95.238 | 252 | 8 | 2 | 3869 | 4120 | 649896385 | 649896632 | 2.980000e-106 | 396.0 |
15 | TraesCS3D01G341100 | chr2D | 89.062 | 128 | 10 | 4 | 2635 | 2760 | 425216111 | 425215986 | 5.510000e-34 | 156.0 |
16 | TraesCS3D01G341100 | chr2D | 97.917 | 48 | 1 | 0 | 2561 | 2608 | 5669239 | 5669286 | 2.640000e-12 | 84.2 |
17 | TraesCS3D01G341100 | chr2A | 97.872 | 235 | 5 | 0 | 3886 | 4120 | 520595642 | 520595876 | 1.380000e-109 | 407.0 |
18 | TraesCS3D01G341100 | chr2A | 97.468 | 237 | 5 | 1 | 3882 | 4118 | 640183266 | 640183031 | 1.780000e-108 | 403.0 |
19 | TraesCS3D01G341100 | chr2A | 89.844 | 128 | 9 | 4 | 2635 | 2760 | 562984729 | 562984854 | 1.190000e-35 | 161.0 |
20 | TraesCS3D01G341100 | chr2A | 97.917 | 48 | 1 | 0 | 2561 | 2608 | 4161467 | 4161514 | 2.640000e-12 | 84.2 |
21 | TraesCS3D01G341100 | chr7A | 96.694 | 242 | 7 | 1 | 3879 | 4120 | 486828579 | 486828819 | 6.420000e-108 | 401.0 |
22 | TraesCS3D01G341100 | chr1A | 82.997 | 347 | 50 | 7 | 1970 | 2313 | 493502007 | 493501667 | 5.170000e-79 | 305.0 |
23 | TraesCS3D01G341100 | chr1A | 93.548 | 124 | 8 | 0 | 2508 | 2631 | 493501565 | 493501442 | 7.030000e-43 | 185.0 |
24 | TraesCS3D01G341100 | chr1A | 86.861 | 137 | 18 | 0 | 2635 | 2771 | 493501337 | 493501201 | 1.980000e-33 | 154.0 |
25 | TraesCS3D01G341100 | chr1D | 82.997 | 347 | 48 | 8 | 1970 | 2312 | 391862166 | 391862505 | 1.860000e-78 | 303.0 |
26 | TraesCS3D01G341100 | chr1D | 95.161 | 124 | 6 | 0 | 2508 | 2631 | 391862608 | 391862731 | 3.250000e-46 | 196.0 |
27 | TraesCS3D01G341100 | chr1D | 88.321 | 137 | 16 | 0 | 2635 | 2771 | 391862837 | 391862973 | 9.160000e-37 | 165.0 |
28 | TraesCS3D01G341100 | chr1B | 82.948 | 346 | 50 | 7 | 1970 | 2312 | 530779787 | 530779448 | 1.860000e-78 | 303.0 |
29 | TraesCS3D01G341100 | chr1B | 92.742 | 124 | 9 | 0 | 2508 | 2631 | 530779345 | 530779222 | 3.270000e-41 | 180.0 |
30 | TraesCS3D01G341100 | chr1B | 87.591 | 137 | 17 | 0 | 2635 | 2771 | 530779117 | 530778981 | 4.260000e-35 | 159.0 |
31 | TraesCS3D01G341100 | chr2B | 89.844 | 128 | 9 | 4 | 2635 | 2760 | 500590527 | 500590402 | 1.190000e-35 | 161.0 |
32 | TraesCS3D01G341100 | chr2B | 97.917 | 48 | 1 | 0 | 2561 | 2608 | 5689055 | 5689008 | 2.640000e-12 | 84.2 |
33 | TraesCS3D01G341100 | chr5B | 76.506 | 166 | 37 | 2 | 1984 | 2148 | 578540649 | 578540813 | 5.670000e-14 | 89.8 |
34 | TraesCS3D01G341100 | chr5A | 76.220 | 164 | 37 | 2 | 1986 | 2148 | 591443768 | 591443930 | 7.340000e-13 | 86.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G341100 | chr3D | 454507463 | 454511582 | 4119 | False | 7609.000000 | 7609 | 100.000000 | 1 | 4120 | 1 | chr3D.!!$F1 | 4119 |
1 | TraesCS3D01G341100 | chr3A | 596512916 | 596516651 | 3735 | False | 5064.000000 | 5064 | 91.010000 | 1 | 3843 | 1 | chr3A.!!$F1 | 3842 |
2 | TraesCS3D01G341100 | chr3A | 596546559 | 596547083 | 524 | False | 292.000000 | 388 | 90.198000 | 3180 | 3695 | 2 | chr3A.!!$F2 | 515 |
3 | TraesCS3D01G341100 | chr3B | 597086954 | 597090880 | 3926 | False | 2636.000000 | 5007 | 86.328500 | 1 | 3845 | 2 | chr3B.!!$F2 | 3844 |
4 | TraesCS3D01G341100 | chr1A | 493501201 | 493502007 | 806 | True | 214.666667 | 305 | 87.802000 | 1970 | 2771 | 3 | chr1A.!!$R1 | 801 |
5 | TraesCS3D01G341100 | chr1D | 391862166 | 391862973 | 807 | False | 221.333333 | 303 | 88.826333 | 1970 | 2771 | 3 | chr1D.!!$F1 | 801 |
6 | TraesCS3D01G341100 | chr1B | 530778981 | 530779787 | 806 | True | 214.000000 | 303 | 87.760333 | 1970 | 2771 | 3 | chr1B.!!$R1 | 801 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
407 | 410 | 0.320421 | CAGCCAAGCAAAGCAAGCAT | 60.320 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 | F |
408 | 411 | 1.067425 | CAGCCAAGCAAAGCAAGCATA | 60.067 | 47.619 | 0.00 | 0.00 | 0.00 | 3.14 | F |
409 | 412 | 1.203994 | AGCCAAGCAAAGCAAGCATAG | 59.796 | 47.619 | 0.00 | 0.00 | 0.00 | 2.23 | F |
2243 | 2281 | 1.146358 | CGTCCGAGAATTCCTTCGGC | 61.146 | 60.000 | 24.23 | 19.02 | 44.53 | 5.54 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1718 | 1756 | 0.307760 | GGGTTGCCGCTAATCAATCG | 59.692 | 55.000 | 0.0 | 0.00 | 0.00 | 3.34 | R |
1946 | 1984 | 1.515088 | CGAGTGCGTCTGCCTGTAG | 60.515 | 63.158 | 0.0 | 0.00 | 41.78 | 2.74 | R |
2255 | 2293 | 2.202453 | GACGAGTTCTCGGGCGTC | 60.202 | 66.667 | 22.9 | 10.58 | 44.83 | 5.19 | R |
3918 | 4193 | 0.034337 | GAGGCCCAACAACGTCTACA | 59.966 | 55.000 | 0.0 | 0.00 | 0.00 | 2.74 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
53 | 55 | 5.520649 | CGATTAACTAGAAAAGAGGTCAGCC | 59.479 | 44.000 | 0.00 | 0.00 | 0.00 | 4.85 |
78 | 80 | 8.084073 | CCAGTAGAATTATTTAACCCATGCATG | 58.916 | 37.037 | 20.19 | 20.19 | 0.00 | 4.06 |
80 | 82 | 8.850156 | AGTAGAATTATTTAACCCATGCATGTC | 58.150 | 33.333 | 24.58 | 11.05 | 0.00 | 3.06 |
124 | 126 | 1.770294 | TGGGTCCTGGTTGAAACAAC | 58.230 | 50.000 | 6.13 | 6.13 | 0.00 | 3.32 |
235 | 238 | 9.462606 | AAATTCTACCGAATGGACTATTTTCTT | 57.537 | 29.630 | 0.00 | 0.00 | 39.72 | 2.52 |
400 | 403 | 1.223187 | CAAAAGGCAGCCAAGCAAAG | 58.777 | 50.000 | 15.80 | 0.00 | 35.83 | 2.77 |
401 | 404 | 0.533531 | AAAAGGCAGCCAAGCAAAGC | 60.534 | 50.000 | 15.80 | 0.00 | 35.83 | 3.51 |
402 | 405 | 1.688269 | AAAGGCAGCCAAGCAAAGCA | 61.688 | 50.000 | 15.80 | 0.00 | 35.83 | 3.91 |
403 | 406 | 1.688269 | AAGGCAGCCAAGCAAAGCAA | 61.688 | 50.000 | 15.80 | 0.00 | 35.83 | 3.91 |
405 | 408 | 2.315386 | GCAGCCAAGCAAAGCAAGC | 61.315 | 57.895 | 0.00 | 0.00 | 0.00 | 4.01 |
406 | 409 | 1.068417 | CAGCCAAGCAAAGCAAGCA | 59.932 | 52.632 | 0.00 | 0.00 | 0.00 | 3.91 |
407 | 410 | 0.320421 | CAGCCAAGCAAAGCAAGCAT | 60.320 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
408 | 411 | 1.067425 | CAGCCAAGCAAAGCAAGCATA | 60.067 | 47.619 | 0.00 | 0.00 | 0.00 | 3.14 |
409 | 412 | 1.203994 | AGCCAAGCAAAGCAAGCATAG | 59.796 | 47.619 | 0.00 | 0.00 | 0.00 | 2.23 |
410 | 413 | 1.636988 | CCAAGCAAAGCAAGCATAGC | 58.363 | 50.000 | 0.00 | 0.00 | 0.00 | 2.97 |
424 | 433 | 3.623703 | AGCATAGCATGGACATGACAAA | 58.376 | 40.909 | 15.99 | 0.00 | 41.20 | 2.83 |
430 | 439 | 2.816087 | GCATGGACATGACAAACTCAGT | 59.184 | 45.455 | 15.99 | 0.00 | 41.20 | 3.41 |
431 | 440 | 3.365666 | GCATGGACATGACAAACTCAGTG | 60.366 | 47.826 | 15.99 | 0.00 | 41.20 | 3.66 |
550 | 559 | 4.016444 | TGCTGATTTAATCCCCTCAACAC | 58.984 | 43.478 | 2.22 | 0.00 | 0.00 | 3.32 |
630 | 640 | 2.261671 | CGACCACCAACTCCTCCG | 59.738 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
644 | 654 | 2.525629 | TCCGCTCACCCAGAACCA | 60.526 | 61.111 | 0.00 | 0.00 | 0.00 | 3.67 |
815 | 825 | 1.602377 | CCAGTCCACGGTCAAAGTTTC | 59.398 | 52.381 | 0.00 | 0.00 | 0.00 | 2.78 |
1254 | 1270 | 2.267324 | GTGCTCCTCACCTCCAGC | 59.733 | 66.667 | 0.00 | 0.00 | 39.79 | 4.85 |
1281 | 1302 | 4.612536 | CGCGCCATGGAATTCCGC | 62.613 | 66.667 | 18.40 | 19.30 | 39.14 | 5.54 |
1300 | 1321 | 3.272334 | GGCGCCATGTCATCCGAC | 61.272 | 66.667 | 24.80 | 0.38 | 42.93 | 4.79 |
1669 | 1707 | 2.804931 | TCGCGCTGTCGTGTCATG | 60.805 | 61.111 | 5.56 | 0.00 | 45.60 | 3.07 |
1718 | 1756 | 3.321111 | TGAGAAATAGTCCCCGTGATAGC | 59.679 | 47.826 | 0.00 | 0.00 | 0.00 | 2.97 |
1732 | 1770 | 2.092838 | GTGATAGCGATTGATTAGCGGC | 59.907 | 50.000 | 0.00 | 0.00 | 35.78 | 6.53 |
1817 | 1855 | 3.121030 | GCGTACACAGGCCAGCAG | 61.121 | 66.667 | 5.01 | 0.00 | 0.00 | 4.24 |
1818 | 1856 | 3.121030 | CGTACACAGGCCAGCAGC | 61.121 | 66.667 | 5.01 | 0.00 | 42.60 | 5.25 |
2243 | 2281 | 1.146358 | CGTCCGAGAATTCCTTCGGC | 61.146 | 60.000 | 24.23 | 19.02 | 44.53 | 5.54 |
2245 | 2283 | 2.526120 | CCGAGAATTCCTTCGGCGC | 61.526 | 63.158 | 19.52 | 0.00 | 38.95 | 6.53 |
2366 | 2422 | 0.807667 | CGGATTCCAAGAGGTGAGCG | 60.808 | 60.000 | 3.09 | 0.00 | 35.89 | 5.03 |
2371 | 2427 | 2.048222 | CAAGAGGTGAGCGCCGAA | 60.048 | 61.111 | 2.29 | 0.00 | 0.00 | 4.30 |
2374 | 2430 | 1.021390 | AAGAGGTGAGCGCCGAATTG | 61.021 | 55.000 | 2.29 | 0.00 | 0.00 | 2.32 |
2380 | 2436 | 1.463444 | GTGAGCGCCGAATTGTACTTT | 59.537 | 47.619 | 2.29 | 0.00 | 0.00 | 2.66 |
2381 | 2437 | 2.669434 | GTGAGCGCCGAATTGTACTTTA | 59.331 | 45.455 | 2.29 | 0.00 | 0.00 | 1.85 |
2383 | 2439 | 3.747010 | TGAGCGCCGAATTGTACTTTAAA | 59.253 | 39.130 | 2.29 | 0.00 | 0.00 | 1.52 |
2385 | 2441 | 5.581479 | TGAGCGCCGAATTGTACTTTAAATA | 59.419 | 36.000 | 2.29 | 0.00 | 0.00 | 1.40 |
2386 | 2442 | 6.259167 | TGAGCGCCGAATTGTACTTTAAATAT | 59.741 | 34.615 | 2.29 | 0.00 | 0.00 | 1.28 |
2387 | 2443 | 7.438757 | TGAGCGCCGAATTGTACTTTAAATATA | 59.561 | 33.333 | 2.29 | 0.00 | 0.00 | 0.86 |
2388 | 2444 | 8.319143 | AGCGCCGAATTGTACTTTAAATATAT | 57.681 | 30.769 | 2.29 | 0.00 | 0.00 | 0.86 |
2435 | 2496 | 2.205022 | TGCATTCTTGGAGGAACAGG | 57.795 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2473 | 2534 | 1.892474 | CGGCCAAATTTTCAGGAGGAA | 59.108 | 47.619 | 2.24 | 0.00 | 0.00 | 3.36 |
2498 | 2559 | 2.202892 | GGTGACGGCGAGGGAATC | 60.203 | 66.667 | 16.62 | 0.00 | 0.00 | 2.52 |
2654 | 2820 | 1.002087 | AGCTACTACAAGTGCACCACC | 59.998 | 52.381 | 14.63 | 0.00 | 34.49 | 4.61 |
2865 | 3031 | 2.511403 | TGGCGTACCAAACCAGCA | 59.489 | 55.556 | 0.00 | 0.00 | 45.37 | 4.41 |
2867 | 3033 | 2.554272 | GCGTACCAAACCAGCACG | 59.446 | 61.111 | 0.00 | 0.00 | 35.78 | 5.34 |
2869 | 3035 | 2.322081 | CGTACCAAACCAGCACGGG | 61.322 | 63.158 | 0.00 | 0.00 | 40.22 | 5.28 |
2870 | 3036 | 1.071814 | GTACCAAACCAGCACGGGA | 59.928 | 57.895 | 0.00 | 0.00 | 40.22 | 5.14 |
2871 | 3037 | 0.953960 | GTACCAAACCAGCACGGGAG | 60.954 | 60.000 | 0.00 | 0.00 | 40.22 | 4.30 |
2872 | 3038 | 2.119484 | TACCAAACCAGCACGGGAGG | 62.119 | 60.000 | 0.00 | 0.00 | 40.22 | 4.30 |
2874 | 3040 | 4.660938 | AAACCAGCACGGGAGGCC | 62.661 | 66.667 | 0.00 | 0.00 | 40.22 | 5.19 |
3123 | 3289 | 2.232452 | CAGAACTCCCAGTACTGACCAG | 59.768 | 54.545 | 24.68 | 17.12 | 0.00 | 4.00 |
3145 | 3311 | 2.350772 | CGAGTGTCAGAAATGGCAAACC | 60.351 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3231 | 3397 | 2.865079 | TCGTTTATTTGTTGGGAGGCA | 58.135 | 42.857 | 0.00 | 0.00 | 0.00 | 4.75 |
3359 | 3530 | 1.202627 | TGCTTTGCCATTGTTTCCACC | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 4.61 |
3426 | 3597 | 9.768662 | AGCAGAAATTTGTCATTATTCAAGTTT | 57.231 | 25.926 | 0.00 | 0.00 | 36.63 | 2.66 |
3471 | 3738 | 5.581085 | AGTGGTATGTTTTATTCTCAGCGAC | 59.419 | 40.000 | 0.00 | 0.00 | 0.00 | 5.19 |
3496 | 3763 | 3.695060 | CGTACCAGACCTCAGATGTACTT | 59.305 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
3498 | 3765 | 5.531659 | CGTACCAGACCTCAGATGTACTTAT | 59.468 | 44.000 | 0.00 | 0.00 | 0.00 | 1.73 |
3504 | 3771 | 8.258007 | CCAGACCTCAGATGTACTTATTGTAAA | 58.742 | 37.037 | 0.00 | 0.00 | 32.25 | 2.01 |
3505 | 3772 | 9.823647 | CAGACCTCAGATGTACTTATTGTAAAT | 57.176 | 33.333 | 0.00 | 0.00 | 32.00 | 1.40 |
3531 | 3798 | 8.755696 | TTGTAATCCAATCATTTTGTAGTTGC | 57.244 | 30.769 | 0.00 | 0.00 | 0.00 | 4.17 |
3536 | 3803 | 4.925054 | CCAATCATTTTGTAGTTGCACAGG | 59.075 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
3540 | 3807 | 5.009631 | TCATTTTGTAGTTGCACAGGCTAT | 58.990 | 37.500 | 0.00 | 0.00 | 41.91 | 2.97 |
3691 | 3958 | 3.320541 | TCCGAACTAACCAACCGTTTAGA | 59.679 | 43.478 | 0.00 | 0.00 | 35.79 | 2.10 |
3699 | 3966 | 3.822940 | ACCAACCGTTTAGAAATCACCA | 58.177 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
3705 | 3972 | 3.128589 | CCGTTTAGAAATCACCACCCATG | 59.871 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
3706 | 3973 | 3.427503 | CGTTTAGAAATCACCACCCATGC | 60.428 | 47.826 | 0.00 | 0.00 | 0.00 | 4.06 |
3707 | 3974 | 3.448093 | TTAGAAATCACCACCCATGCA | 57.552 | 42.857 | 0.00 | 0.00 | 0.00 | 3.96 |
3708 | 3975 | 1.549203 | AGAAATCACCACCCATGCAC | 58.451 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
3709 | 3976 | 1.076024 | AGAAATCACCACCCATGCACT | 59.924 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
3710 | 3977 | 1.474077 | GAAATCACCACCCATGCACTC | 59.526 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3711 | 3978 | 0.323725 | AATCACCACCCATGCACTCC | 60.324 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3712 | 3979 | 2.215451 | ATCACCACCCATGCACTCCC | 62.215 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3713 | 3980 | 2.858476 | ACCACCCATGCACTCCCA | 60.858 | 61.111 | 0.00 | 0.00 | 0.00 | 4.37 |
3714 | 3981 | 2.361610 | CCACCCATGCACTCCCAC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3715 | 3982 | 2.361610 | CACCCATGCACTCCCACC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3716 | 3983 | 3.661648 | ACCCATGCACTCCCACCC | 61.662 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3717 | 3984 | 4.447342 | CCCATGCACTCCCACCCC | 62.447 | 72.222 | 0.00 | 0.00 | 0.00 | 4.95 |
3718 | 3985 | 4.447342 | CCATGCACTCCCACCCCC | 62.447 | 72.222 | 0.00 | 0.00 | 0.00 | 5.40 |
3806 | 4073 | 2.290896 | CCAGCTCCTTAATGTGGAACCA | 60.291 | 50.000 | 0.00 | 0.00 | 34.36 | 3.67 |
3845 | 4120 | 3.130160 | GCTTCTTGCCAGCTCCGG | 61.130 | 66.667 | 0.00 | 0.00 | 34.15 | 5.14 |
3854 | 4129 | 4.033776 | CAGCTCCGGCCTTCCCAA | 62.034 | 66.667 | 0.00 | 0.00 | 39.73 | 4.12 |
3855 | 4130 | 4.035102 | AGCTCCGGCCTTCCCAAC | 62.035 | 66.667 | 0.00 | 0.00 | 39.73 | 3.77 |
3857 | 4132 | 3.646715 | CTCCGGCCTTCCCAACCA | 61.647 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
3858 | 4133 | 3.920093 | CTCCGGCCTTCCCAACCAC | 62.920 | 68.421 | 0.00 | 0.00 | 0.00 | 4.16 |
3862 | 4137 | 3.961414 | GCCTTCCCAACCACCCGA | 61.961 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
3863 | 4138 | 2.351276 | CCTTCCCAACCACCCGAG | 59.649 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
3864 | 4139 | 2.351276 | CTTCCCAACCACCCGAGG | 59.649 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
3865 | 4140 | 2.448931 | TTCCCAACCACCCGAGGT | 60.449 | 61.111 | 0.00 | 0.00 | 45.91 | 3.85 |
3866 | 4141 | 1.152074 | TTCCCAACCACCCGAGGTA | 60.152 | 57.895 | 0.00 | 0.00 | 42.25 | 3.08 |
3867 | 4142 | 0.548197 | TTCCCAACCACCCGAGGTAT | 60.548 | 55.000 | 0.00 | 0.00 | 42.25 | 2.73 |
3868 | 4143 | 0.548197 | TCCCAACCACCCGAGGTATT | 60.548 | 55.000 | 0.00 | 0.00 | 42.25 | 1.89 |
3869 | 4144 | 0.393808 | CCCAACCACCCGAGGTATTG | 60.394 | 60.000 | 10.08 | 10.08 | 42.25 | 1.90 |
3870 | 4145 | 0.326927 | CCAACCACCCGAGGTATTGT | 59.673 | 55.000 | 13.43 | 3.84 | 42.25 | 2.71 |
3871 | 4146 | 1.271707 | CCAACCACCCGAGGTATTGTT | 60.272 | 52.381 | 13.43 | 7.92 | 42.25 | 2.83 |
3872 | 4147 | 1.810151 | CAACCACCCGAGGTATTGTTG | 59.190 | 52.381 | 12.98 | 12.98 | 42.25 | 3.33 |
3873 | 4148 | 0.322187 | ACCACCCGAGGTATTGTTGC | 60.322 | 55.000 | 0.00 | 0.00 | 40.98 | 4.17 |
3874 | 4149 | 0.322098 | CCACCCGAGGTATTGTTGCA | 60.322 | 55.000 | 0.00 | 0.00 | 32.11 | 4.08 |
3875 | 4150 | 0.802494 | CACCCGAGGTATTGTTGCAC | 59.198 | 55.000 | 0.00 | 0.00 | 32.11 | 4.57 |
3876 | 4151 | 0.398696 | ACCCGAGGTATTGTTGCACA | 59.601 | 50.000 | 0.00 | 0.00 | 32.11 | 4.57 |
3877 | 4152 | 1.004277 | ACCCGAGGTATTGTTGCACAT | 59.996 | 47.619 | 0.00 | 0.00 | 32.11 | 3.21 |
3878 | 4153 | 1.401552 | CCCGAGGTATTGTTGCACATG | 59.598 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
3879 | 4154 | 2.083774 | CCGAGGTATTGTTGCACATGT | 58.916 | 47.619 | 0.00 | 0.00 | 0.00 | 3.21 |
3880 | 4155 | 2.159531 | CCGAGGTATTGTTGCACATGTG | 60.160 | 50.000 | 21.83 | 21.83 | 0.00 | 3.21 |
3890 | 4165 | 3.168271 | CACATGTGCTTCGGACCG | 58.832 | 61.111 | 13.94 | 7.84 | 0.00 | 4.79 |
3891 | 4166 | 1.667830 | CACATGTGCTTCGGACCGT | 60.668 | 57.895 | 13.94 | 0.00 | 0.00 | 4.83 |
3892 | 4167 | 1.070786 | ACATGTGCTTCGGACCGTT | 59.929 | 52.632 | 14.79 | 0.00 | 0.00 | 4.44 |
3893 | 4168 | 1.227999 | ACATGTGCTTCGGACCGTTG | 61.228 | 55.000 | 14.79 | 9.03 | 0.00 | 4.10 |
3894 | 4169 | 0.948623 | CATGTGCTTCGGACCGTTGA | 60.949 | 55.000 | 14.79 | 0.44 | 0.00 | 3.18 |
3895 | 4170 | 0.036388 | ATGTGCTTCGGACCGTTGAT | 60.036 | 50.000 | 14.79 | 0.00 | 0.00 | 2.57 |
3896 | 4171 | 0.948623 | TGTGCTTCGGACCGTTGATG | 60.949 | 55.000 | 14.79 | 0.00 | 0.00 | 3.07 |
3897 | 4172 | 0.949105 | GTGCTTCGGACCGTTGATGT | 60.949 | 55.000 | 14.79 | 0.00 | 0.00 | 3.06 |
3898 | 4173 | 0.669318 | TGCTTCGGACCGTTGATGTC | 60.669 | 55.000 | 14.79 | 0.00 | 0.00 | 3.06 |
3899 | 4174 | 0.389948 | GCTTCGGACCGTTGATGTCT | 60.390 | 55.000 | 14.79 | 0.00 | 33.22 | 3.41 |
3900 | 4175 | 1.135199 | GCTTCGGACCGTTGATGTCTA | 60.135 | 52.381 | 14.79 | 0.00 | 33.22 | 2.59 |
3901 | 4176 | 2.527100 | CTTCGGACCGTTGATGTCTAC | 58.473 | 52.381 | 14.79 | 0.00 | 33.22 | 2.59 |
3902 | 4177 | 1.830279 | TCGGACCGTTGATGTCTACT | 58.170 | 50.000 | 14.79 | 0.00 | 33.22 | 2.57 |
3903 | 4178 | 2.989909 | TCGGACCGTTGATGTCTACTA | 58.010 | 47.619 | 14.79 | 0.00 | 33.22 | 1.82 |
3904 | 4179 | 2.679837 | TCGGACCGTTGATGTCTACTAC | 59.320 | 50.000 | 14.79 | 0.00 | 33.22 | 2.73 |
3905 | 4180 | 2.421073 | CGGACCGTTGATGTCTACTACA | 59.579 | 50.000 | 5.48 | 0.00 | 43.86 | 2.74 |
3906 | 4181 | 3.730061 | CGGACCGTTGATGTCTACTACAC | 60.730 | 52.174 | 5.48 | 0.00 | 42.09 | 2.90 |
3907 | 4182 | 3.192001 | GGACCGTTGATGTCTACTACACA | 59.808 | 47.826 | 0.00 | 0.00 | 42.09 | 3.72 |
3908 | 4183 | 4.321452 | GGACCGTTGATGTCTACTACACAA | 60.321 | 45.833 | 0.00 | 0.00 | 42.09 | 3.33 |
3909 | 4184 | 4.553323 | ACCGTTGATGTCTACTACACAAC | 58.447 | 43.478 | 0.00 | 0.00 | 42.09 | 3.32 |
3910 | 4185 | 3.924686 | CCGTTGATGTCTACTACACAACC | 59.075 | 47.826 | 0.00 | 0.00 | 42.09 | 3.77 |
3911 | 4186 | 4.321750 | CCGTTGATGTCTACTACACAACCT | 60.322 | 45.833 | 0.00 | 0.00 | 42.09 | 3.50 |
3912 | 4187 | 5.227908 | CGTTGATGTCTACTACACAACCTT | 58.772 | 41.667 | 0.00 | 0.00 | 42.09 | 3.50 |
3913 | 4188 | 5.345202 | CGTTGATGTCTACTACACAACCTTC | 59.655 | 44.000 | 0.00 | 0.00 | 42.09 | 3.46 |
3914 | 4189 | 6.456501 | GTTGATGTCTACTACACAACCTTCT | 58.543 | 40.000 | 0.00 | 0.00 | 42.09 | 2.85 |
3915 | 4190 | 6.665992 | TGATGTCTACTACACAACCTTCTT | 57.334 | 37.500 | 0.00 | 0.00 | 42.09 | 2.52 |
3916 | 4191 | 6.688578 | TGATGTCTACTACACAACCTTCTTC | 58.311 | 40.000 | 0.00 | 0.00 | 42.09 | 2.87 |
3917 | 4192 | 6.493802 | TGATGTCTACTACACAACCTTCTTCT | 59.506 | 38.462 | 0.00 | 0.00 | 42.09 | 2.85 |
3918 | 4193 | 6.726490 | TGTCTACTACACAACCTTCTTCTT | 57.274 | 37.500 | 0.00 | 0.00 | 31.43 | 2.52 |
3919 | 4194 | 6.513180 | TGTCTACTACACAACCTTCTTCTTG | 58.487 | 40.000 | 0.00 | 0.00 | 31.43 | 3.02 |
3920 | 4195 | 6.097839 | TGTCTACTACACAACCTTCTTCTTGT | 59.902 | 38.462 | 0.00 | 0.00 | 31.43 | 3.16 |
3921 | 4196 | 7.286087 | TGTCTACTACACAACCTTCTTCTTGTA | 59.714 | 37.037 | 0.00 | 0.00 | 31.43 | 2.41 |
3922 | 4197 | 7.808856 | GTCTACTACACAACCTTCTTCTTGTAG | 59.191 | 40.741 | 5.27 | 5.27 | 41.37 | 2.74 |
3923 | 4198 | 6.726490 | ACTACACAACCTTCTTCTTGTAGA | 57.274 | 37.500 | 12.31 | 0.00 | 39.06 | 2.59 |
3924 | 4199 | 6.514063 | ACTACACAACCTTCTTCTTGTAGAC | 58.486 | 40.000 | 12.31 | 0.00 | 39.06 | 2.59 |
3925 | 4200 | 4.369182 | ACACAACCTTCTTCTTGTAGACG | 58.631 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
3926 | 4201 | 4.142004 | ACACAACCTTCTTCTTGTAGACGT | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
3927 | 4202 | 4.809426 | CACAACCTTCTTCTTGTAGACGTT | 59.191 | 41.667 | 0.00 | 0.00 | 0.00 | 3.99 |
3928 | 4203 | 4.809426 | ACAACCTTCTTCTTGTAGACGTTG | 59.191 | 41.667 | 0.00 | 0.00 | 38.92 | 4.10 |
3929 | 4204 | 4.667519 | ACCTTCTTCTTGTAGACGTTGT | 57.332 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
3930 | 4205 | 5.019785 | ACCTTCTTCTTGTAGACGTTGTT | 57.980 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
3931 | 4206 | 4.809426 | ACCTTCTTCTTGTAGACGTTGTTG | 59.191 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
3932 | 4207 | 4.211374 | CCTTCTTCTTGTAGACGTTGTTGG | 59.789 | 45.833 | 0.00 | 0.00 | 0.00 | 3.77 |
3933 | 4208 | 3.724374 | TCTTCTTGTAGACGTTGTTGGG | 58.276 | 45.455 | 0.00 | 0.00 | 0.00 | 4.12 |
3934 | 4209 | 1.873698 | TCTTGTAGACGTTGTTGGGC | 58.126 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3935 | 4210 | 0.872388 | CTTGTAGACGTTGTTGGGCC | 59.128 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
3936 | 4211 | 0.470766 | TTGTAGACGTTGTTGGGCCT | 59.529 | 50.000 | 4.53 | 0.00 | 0.00 | 5.19 |
3937 | 4212 | 0.034337 | TGTAGACGTTGTTGGGCCTC | 59.966 | 55.000 | 4.53 | 0.00 | 0.00 | 4.70 |
3938 | 4213 | 0.672711 | GTAGACGTTGTTGGGCCTCC | 60.673 | 60.000 | 4.53 | 0.00 | 0.00 | 4.30 |
3939 | 4214 | 1.122632 | TAGACGTTGTTGGGCCTCCA | 61.123 | 55.000 | 4.53 | 0.00 | 42.25 | 3.86 |
3947 | 4222 | 2.853542 | TGGGCCTCCAAGTGCAGA | 60.854 | 61.111 | 4.53 | 0.00 | 40.73 | 4.26 |
3948 | 4223 | 2.045536 | GGGCCTCCAAGTGCAGAG | 60.046 | 66.667 | 0.84 | 0.00 | 0.00 | 3.35 |
3952 | 4227 | 3.733709 | CCTCCAAGTGCAGAGGTTT | 57.266 | 52.632 | 10.81 | 0.00 | 44.01 | 3.27 |
3953 | 4228 | 1.242076 | CCTCCAAGTGCAGAGGTTTG | 58.758 | 55.000 | 10.81 | 0.88 | 44.01 | 2.93 |
3954 | 4229 | 1.477558 | CCTCCAAGTGCAGAGGTTTGT | 60.478 | 52.381 | 10.81 | 0.00 | 44.01 | 2.83 |
3955 | 4230 | 2.224523 | CCTCCAAGTGCAGAGGTTTGTA | 60.225 | 50.000 | 10.81 | 0.00 | 44.01 | 2.41 |
3956 | 4231 | 3.070018 | CTCCAAGTGCAGAGGTTTGTAG | 58.930 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3957 | 4232 | 2.154462 | CCAAGTGCAGAGGTTTGTAGG | 58.846 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
3958 | 4233 | 2.224523 | CCAAGTGCAGAGGTTTGTAGGA | 60.225 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
3959 | 4234 | 2.808543 | CAAGTGCAGAGGTTTGTAGGAC | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3960 | 4235 | 2.047061 | AGTGCAGAGGTTTGTAGGACA | 58.953 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
3961 | 4236 | 2.037772 | AGTGCAGAGGTTTGTAGGACAG | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3962 | 4237 | 2.047061 | TGCAGAGGTTTGTAGGACAGT | 58.953 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
3963 | 4238 | 3.006537 | GTGCAGAGGTTTGTAGGACAGTA | 59.993 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
3964 | 4239 | 3.258372 | TGCAGAGGTTTGTAGGACAGTAG | 59.742 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
3965 | 4240 | 3.851098 | CAGAGGTTTGTAGGACAGTAGC | 58.149 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3966 | 4241 | 3.258372 | CAGAGGTTTGTAGGACAGTAGCA | 59.742 | 47.826 | 0.00 | 0.00 | 0.00 | 3.49 |
3967 | 4242 | 3.901844 | AGAGGTTTGTAGGACAGTAGCAA | 59.098 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
3968 | 4243 | 4.347000 | AGAGGTTTGTAGGACAGTAGCAAA | 59.653 | 41.667 | 0.00 | 0.00 | 0.00 | 3.68 |
3969 | 4244 | 5.013183 | AGAGGTTTGTAGGACAGTAGCAAAT | 59.987 | 40.000 | 0.00 | 0.00 | 32.71 | 2.32 |
3970 | 4245 | 5.631119 | AGGTTTGTAGGACAGTAGCAAATT | 58.369 | 37.500 | 0.00 | 0.00 | 32.71 | 1.82 |
3971 | 4246 | 6.068670 | AGGTTTGTAGGACAGTAGCAAATTT | 58.931 | 36.000 | 0.00 | 0.00 | 32.71 | 1.82 |
3972 | 4247 | 6.206829 | AGGTTTGTAGGACAGTAGCAAATTTC | 59.793 | 38.462 | 0.00 | 0.00 | 32.71 | 2.17 |
3973 | 4248 | 6.379386 | GTTTGTAGGACAGTAGCAAATTTCC | 58.621 | 40.000 | 0.00 | 0.00 | 32.71 | 3.13 |
3974 | 4249 | 4.585879 | TGTAGGACAGTAGCAAATTTCCC | 58.414 | 43.478 | 0.00 | 0.00 | 0.00 | 3.97 |
3975 | 4250 | 4.288626 | TGTAGGACAGTAGCAAATTTCCCT | 59.711 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
3976 | 4251 | 3.956744 | AGGACAGTAGCAAATTTCCCTC | 58.043 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
3977 | 4252 | 3.330701 | AGGACAGTAGCAAATTTCCCTCA | 59.669 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
3978 | 4253 | 4.079253 | GGACAGTAGCAAATTTCCCTCAA | 58.921 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
3979 | 4254 | 4.706962 | GGACAGTAGCAAATTTCCCTCAAT | 59.293 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
3980 | 4255 | 5.185828 | GGACAGTAGCAAATTTCCCTCAATT | 59.814 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3981 | 4256 | 6.377146 | GGACAGTAGCAAATTTCCCTCAATTA | 59.623 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
3982 | 4257 | 7.396540 | ACAGTAGCAAATTTCCCTCAATTAG | 57.603 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
3983 | 4258 | 7.175104 | ACAGTAGCAAATTTCCCTCAATTAGA | 58.825 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
3984 | 4259 | 7.836183 | ACAGTAGCAAATTTCCCTCAATTAGAT | 59.164 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
3985 | 4260 | 8.133627 | CAGTAGCAAATTTCCCTCAATTAGATG | 58.866 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
3986 | 4261 | 8.055181 | AGTAGCAAATTTCCCTCAATTAGATGA | 58.945 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
3987 | 4262 | 7.105241 | AGCAAATTTCCCTCAATTAGATGAC | 57.895 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3988 | 4263 | 6.097412 | AGCAAATTTCCCTCAATTAGATGACC | 59.903 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
3989 | 4264 | 6.097412 | GCAAATTTCCCTCAATTAGATGACCT | 59.903 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
3990 | 4265 | 7.285401 | GCAAATTTCCCTCAATTAGATGACCTA | 59.715 | 37.037 | 0.00 | 0.00 | 0.00 | 3.08 |
3991 | 4266 | 9.189156 | CAAATTTCCCTCAATTAGATGACCTAA | 57.811 | 33.333 | 0.00 | 0.00 | 41.23 | 2.69 |
3992 | 4267 | 8.986929 | AATTTCCCTCAATTAGATGACCTAAG | 57.013 | 34.615 | 0.00 | 0.00 | 40.40 | 2.18 |
3993 | 4268 | 7.749377 | TTTCCCTCAATTAGATGACCTAAGA | 57.251 | 36.000 | 0.00 | 0.00 | 40.40 | 2.10 |
3994 | 4269 | 7.937700 | TTCCCTCAATTAGATGACCTAAGAT | 57.062 | 36.000 | 0.00 | 0.00 | 40.40 | 2.40 |
3995 | 4270 | 7.937700 | TCCCTCAATTAGATGACCTAAGATT | 57.062 | 36.000 | 0.00 | 0.00 | 40.40 | 2.40 |
3996 | 4271 | 8.337118 | TCCCTCAATTAGATGACCTAAGATTT | 57.663 | 34.615 | 0.00 | 0.00 | 40.40 | 2.17 |
3997 | 4272 | 9.447279 | TCCCTCAATTAGATGACCTAAGATTTA | 57.553 | 33.333 | 0.00 | 0.00 | 40.40 | 1.40 |
4005 | 4280 | 9.929180 | TTAGATGACCTAAGATTTATCAATCCG | 57.071 | 33.333 | 0.00 | 0.00 | 39.95 | 4.18 |
4006 | 4281 | 7.967908 | AGATGACCTAAGATTTATCAATCCGT | 58.032 | 34.615 | 0.00 | 0.00 | 39.95 | 4.69 |
4007 | 4282 | 7.875041 | AGATGACCTAAGATTTATCAATCCGTG | 59.125 | 37.037 | 0.00 | 0.00 | 39.95 | 4.94 |
4008 | 4283 | 6.288294 | TGACCTAAGATTTATCAATCCGTGG | 58.712 | 40.000 | 0.00 | 0.00 | 39.95 | 4.94 |
4009 | 4284 | 5.621193 | ACCTAAGATTTATCAATCCGTGGG | 58.379 | 41.667 | 0.00 | 0.16 | 39.95 | 4.61 |
4010 | 4285 | 5.368523 | ACCTAAGATTTATCAATCCGTGGGA | 59.631 | 40.000 | 9.15 | 0.00 | 39.95 | 4.37 |
4011 | 4286 | 5.934625 | CCTAAGATTTATCAATCCGTGGGAG | 59.065 | 44.000 | 0.00 | 0.00 | 39.95 | 4.30 |
4012 | 4287 | 4.357918 | AGATTTATCAATCCGTGGGAGG | 57.642 | 45.455 | 0.00 | 0.00 | 39.95 | 4.30 |
4013 | 4288 | 3.716872 | AGATTTATCAATCCGTGGGAGGT | 59.283 | 43.478 | 0.00 | 0.00 | 39.95 | 3.85 |
4014 | 4289 | 3.275617 | TTTATCAATCCGTGGGAGGTG | 57.724 | 47.619 | 0.00 | 0.00 | 34.05 | 4.00 |
4015 | 4290 | 1.874129 | TATCAATCCGTGGGAGGTGT | 58.126 | 50.000 | 0.00 | 0.00 | 34.05 | 4.16 |
4016 | 4291 | 1.874129 | ATCAATCCGTGGGAGGTGTA | 58.126 | 50.000 | 0.00 | 0.00 | 34.05 | 2.90 |
4017 | 4292 | 1.191535 | TCAATCCGTGGGAGGTGTAG | 58.808 | 55.000 | 0.00 | 0.00 | 34.05 | 2.74 |
4018 | 4293 | 0.178068 | CAATCCGTGGGAGGTGTAGG | 59.822 | 60.000 | 0.00 | 0.00 | 34.05 | 3.18 |
4019 | 4294 | 0.042131 | AATCCGTGGGAGGTGTAGGA | 59.958 | 55.000 | 0.00 | 0.00 | 34.05 | 2.94 |
4020 | 4295 | 0.264955 | ATCCGTGGGAGGTGTAGGAT | 59.735 | 55.000 | 0.00 | 0.00 | 34.05 | 3.24 |
4021 | 4296 | 0.686441 | TCCGTGGGAGGTGTAGGATG | 60.686 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4022 | 4297 | 0.686441 | CCGTGGGAGGTGTAGGATGA | 60.686 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
4023 | 4298 | 1.191535 | CGTGGGAGGTGTAGGATGAA | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4024 | 4299 | 1.137086 | CGTGGGAGGTGTAGGATGAAG | 59.863 | 57.143 | 0.00 | 0.00 | 0.00 | 3.02 |
4025 | 4300 | 2.467880 | GTGGGAGGTGTAGGATGAAGA | 58.532 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
4026 | 4301 | 3.041946 | GTGGGAGGTGTAGGATGAAGAT | 58.958 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
4027 | 4302 | 3.041211 | TGGGAGGTGTAGGATGAAGATG | 58.959 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
4028 | 4303 | 2.370189 | GGGAGGTGTAGGATGAAGATGG | 59.630 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
4029 | 4304 | 3.041946 | GGAGGTGTAGGATGAAGATGGT | 58.958 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4030 | 4305 | 3.070302 | GGAGGTGTAGGATGAAGATGGTC | 59.930 | 52.174 | 0.00 | 0.00 | 0.00 | 4.02 |
4031 | 4306 | 3.964031 | GAGGTGTAGGATGAAGATGGTCT | 59.036 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
4032 | 4307 | 3.964031 | AGGTGTAGGATGAAGATGGTCTC | 59.036 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
4033 | 4308 | 3.964031 | GGTGTAGGATGAAGATGGTCTCT | 59.036 | 47.826 | 0.00 | 0.00 | 34.96 | 3.10 |
4034 | 4309 | 4.038642 | GGTGTAGGATGAAGATGGTCTCTC | 59.961 | 50.000 | 0.00 | 0.00 | 31.03 | 3.20 |
4035 | 4310 | 4.892934 | GTGTAGGATGAAGATGGTCTCTCT | 59.107 | 45.833 | 0.00 | 0.00 | 31.03 | 3.10 |
4036 | 4311 | 5.009610 | GTGTAGGATGAAGATGGTCTCTCTC | 59.990 | 48.000 | 0.00 | 0.00 | 31.03 | 3.20 |
4037 | 4312 | 4.262891 | AGGATGAAGATGGTCTCTCTCA | 57.737 | 45.455 | 0.00 | 0.00 | 31.03 | 3.27 |
4038 | 4313 | 4.618635 | AGGATGAAGATGGTCTCTCTCAA | 58.381 | 43.478 | 0.00 | 0.00 | 31.03 | 3.02 |
4039 | 4314 | 4.650588 | AGGATGAAGATGGTCTCTCTCAAG | 59.349 | 45.833 | 0.00 | 0.00 | 31.03 | 3.02 |
4040 | 4315 | 3.883830 | TGAAGATGGTCTCTCTCAAGC | 57.116 | 47.619 | 0.00 | 0.00 | 31.03 | 4.01 |
4041 | 4316 | 3.168292 | TGAAGATGGTCTCTCTCAAGCA | 58.832 | 45.455 | 0.00 | 0.00 | 31.03 | 3.91 |
4042 | 4317 | 3.580022 | TGAAGATGGTCTCTCTCAAGCAA | 59.420 | 43.478 | 0.00 | 0.00 | 31.03 | 3.91 |
4043 | 4318 | 3.608316 | AGATGGTCTCTCTCAAGCAAC | 57.392 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
4044 | 4319 | 2.235898 | AGATGGTCTCTCTCAAGCAACC | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
4045 | 4320 | 0.687354 | TGGTCTCTCTCAAGCAACCC | 59.313 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
4046 | 4321 | 0.980423 | GGTCTCTCTCAAGCAACCCT | 59.020 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
4047 | 4322 | 1.338579 | GGTCTCTCTCAAGCAACCCTG | 60.339 | 57.143 | 0.00 | 0.00 | 0.00 | 4.45 |
4060 | 4335 | 3.742433 | CAACCCTGCAACCAAATAACA | 57.258 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
4061 | 4336 | 4.065321 | CAACCCTGCAACCAAATAACAA | 57.935 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
4062 | 4337 | 4.446371 | CAACCCTGCAACCAAATAACAAA | 58.554 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
4063 | 4338 | 4.335400 | ACCCTGCAACCAAATAACAAAG | 57.665 | 40.909 | 0.00 | 0.00 | 0.00 | 2.77 |
4064 | 4339 | 3.964031 | ACCCTGCAACCAAATAACAAAGA | 59.036 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
4065 | 4340 | 4.039124 | ACCCTGCAACCAAATAACAAAGAG | 59.961 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
4066 | 4341 | 4.039124 | CCCTGCAACCAAATAACAAAGAGT | 59.961 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
4067 | 4342 | 5.222631 | CCTGCAACCAAATAACAAAGAGTC | 58.777 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
4068 | 4343 | 5.010012 | CCTGCAACCAAATAACAAAGAGTCT | 59.990 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
4069 | 4344 | 6.072112 | TGCAACCAAATAACAAAGAGTCTC | 57.928 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
4070 | 4345 | 5.827797 | TGCAACCAAATAACAAAGAGTCTCT | 59.172 | 36.000 | 0.00 | 0.00 | 0.00 | 3.10 |
4071 | 4346 | 6.321181 | TGCAACCAAATAACAAAGAGTCTCTT | 59.679 | 34.615 | 9.43 | 9.43 | 38.59 | 2.85 |
4072 | 4347 | 6.638468 | GCAACCAAATAACAAAGAGTCTCTTG | 59.362 | 38.462 | 15.90 | 11.96 | 36.71 | 3.02 |
4073 | 4348 | 7.682021 | GCAACCAAATAACAAAGAGTCTCTTGT | 60.682 | 37.037 | 15.90 | 12.54 | 36.71 | 3.16 |
4074 | 4349 | 7.264373 | ACCAAATAACAAAGAGTCTCTTGTG | 57.736 | 36.000 | 15.90 | 16.38 | 36.71 | 3.33 |
4075 | 4350 | 6.828785 | ACCAAATAACAAAGAGTCTCTTGTGT | 59.171 | 34.615 | 15.90 | 16.93 | 36.71 | 3.72 |
4076 | 4351 | 7.012421 | ACCAAATAACAAAGAGTCTCTTGTGTC | 59.988 | 37.037 | 15.90 | 0.00 | 36.71 | 3.67 |
4077 | 4352 | 7.355778 | CAAATAACAAAGAGTCTCTTGTGTCC | 58.644 | 38.462 | 15.90 | 0.00 | 36.71 | 4.02 |
4078 | 4353 | 3.477210 | ACAAAGAGTCTCTTGTGTCCC | 57.523 | 47.619 | 15.90 | 0.00 | 36.71 | 4.46 |
4079 | 4354 | 2.104963 | ACAAAGAGTCTCTTGTGTCCCC | 59.895 | 50.000 | 15.90 | 0.00 | 36.71 | 4.81 |
4080 | 4355 | 2.103153 | AAGAGTCTCTTGTGTCCCCA | 57.897 | 50.000 | 14.48 | 0.00 | 34.98 | 4.96 |
4081 | 4356 | 2.103153 | AGAGTCTCTTGTGTCCCCAA | 57.897 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
4082 | 4357 | 1.694696 | AGAGTCTCTTGTGTCCCCAAC | 59.305 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
4083 | 4358 | 1.416401 | GAGTCTCTTGTGTCCCCAACA | 59.584 | 52.381 | 0.00 | 0.00 | 34.78 | 3.33 |
4090 | 4365 | 3.428100 | TGTCCCCAACACACCCAA | 58.572 | 55.556 | 0.00 | 0.00 | 31.20 | 4.12 |
4091 | 4366 | 1.934410 | TGTCCCCAACACACCCAAT | 59.066 | 52.632 | 0.00 | 0.00 | 31.20 | 3.16 |
4092 | 4367 | 1.149986 | TGTCCCCAACACACCCAATA | 58.850 | 50.000 | 0.00 | 0.00 | 31.20 | 1.90 |
4093 | 4368 | 1.202952 | TGTCCCCAACACACCCAATAC | 60.203 | 52.381 | 0.00 | 0.00 | 31.20 | 1.89 |
4094 | 4369 | 1.149986 | TCCCCAACACACCCAATACA | 58.850 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4095 | 4370 | 1.499438 | TCCCCAACACACCCAATACAA | 59.501 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
4096 | 4371 | 2.110899 | TCCCCAACACACCCAATACAAT | 59.889 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
4097 | 4372 | 2.233431 | CCCCAACACACCCAATACAATG | 59.767 | 50.000 | 0.00 | 0.00 | 0.00 | 2.82 |
4098 | 4373 | 2.233431 | CCCAACACACCCAATACAATGG | 59.767 | 50.000 | 0.00 | 0.00 | 40.35 | 3.16 |
4099 | 4374 | 2.896685 | CCAACACACCCAATACAATGGT | 59.103 | 45.455 | 0.00 | 0.00 | 38.91 | 3.55 |
4100 | 4375 | 4.082845 | CCAACACACCCAATACAATGGTA | 58.917 | 43.478 | 0.00 | 0.00 | 38.91 | 3.25 |
4101 | 4376 | 4.524714 | CCAACACACCCAATACAATGGTAA | 59.475 | 41.667 | 0.00 | 0.00 | 38.91 | 2.85 |
4102 | 4377 | 5.011125 | CCAACACACCCAATACAATGGTAAA | 59.989 | 40.000 | 0.00 | 0.00 | 38.91 | 2.01 |
4103 | 4378 | 6.295575 | CCAACACACCCAATACAATGGTAAAT | 60.296 | 38.462 | 0.00 | 0.00 | 38.91 | 1.40 |
4104 | 4379 | 6.926630 | ACACACCCAATACAATGGTAAATT | 57.073 | 33.333 | 0.00 | 0.00 | 38.91 | 1.82 |
4105 | 4380 | 6.696411 | ACACACCCAATACAATGGTAAATTG | 58.304 | 36.000 | 0.00 | 0.00 | 38.91 | 2.32 |
4106 | 4381 | 6.268847 | ACACACCCAATACAATGGTAAATTGT | 59.731 | 34.615 | 8.60 | 8.60 | 43.74 | 2.71 |
4107 | 4382 | 7.451877 | ACACACCCAATACAATGGTAAATTGTA | 59.548 | 33.333 | 12.01 | 12.01 | 45.16 | 2.41 |
4116 | 4391 | 7.095695 | ACAATGGTAAATTGTATAGGTGCAC | 57.904 | 36.000 | 8.80 | 8.80 | 40.12 | 4.57 |
4117 | 4392 | 6.889722 | ACAATGGTAAATTGTATAGGTGCACT | 59.110 | 34.615 | 17.98 | 5.41 | 40.12 | 4.40 |
4118 | 4393 | 8.050325 | ACAATGGTAAATTGTATAGGTGCACTA | 58.950 | 33.333 | 17.98 | 7.61 | 40.12 | 2.74 |
4119 | 4394 | 8.559536 | CAATGGTAAATTGTATAGGTGCACTAG | 58.440 | 37.037 | 17.98 | 0.00 | 34.56 | 2.57 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
6 | 7 | 5.483685 | GGACTGCCCTCCTTTTAAAATTT | 57.516 | 39.130 | 0.09 | 0.00 | 0.00 | 1.82 |
29 | 31 | 5.520649 | GGCTGACCTCTTTTCTAGTTAATCG | 59.479 | 44.000 | 0.00 | 0.00 | 0.00 | 3.34 |
53 | 55 | 8.632679 | ACATGCATGGGTTAAATAATTCTACTG | 58.367 | 33.333 | 29.41 | 0.00 | 0.00 | 2.74 |
78 | 80 | 1.597663 | CGCCCACCAATATCTTTCGAC | 59.402 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
80 | 82 | 0.307760 | GCGCCCACCAATATCTTTCG | 59.692 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
162 | 164 | 6.937436 | TTCTTTCCTTCTTAAAGTGACACC | 57.063 | 37.500 | 0.84 | 0.00 | 35.79 | 4.16 |
235 | 238 | 6.932400 | ACATGTGTTTTCAACTCCTATACGAA | 59.068 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
296 | 299 | 3.754965 | TGCAGTGGAGCAAGAACTTTAT | 58.245 | 40.909 | 0.00 | 0.00 | 42.46 | 1.40 |
400 | 403 | 1.951602 | TCATGTCCATGCTATGCTTGC | 59.048 | 47.619 | 2.33 | 0.00 | 38.65 | 4.01 |
401 | 404 | 2.946990 | TGTCATGTCCATGCTATGCTTG | 59.053 | 45.455 | 2.33 | 0.00 | 38.65 | 4.01 |
402 | 405 | 3.286329 | TGTCATGTCCATGCTATGCTT | 57.714 | 42.857 | 2.33 | 0.00 | 38.65 | 3.91 |
403 | 406 | 3.286329 | TTGTCATGTCCATGCTATGCT | 57.714 | 42.857 | 2.33 | 0.00 | 38.65 | 3.79 |
405 | 408 | 4.637091 | TGAGTTTGTCATGTCCATGCTATG | 59.363 | 41.667 | 2.33 | 0.00 | 38.65 | 2.23 |
406 | 409 | 4.847198 | TGAGTTTGTCATGTCCATGCTAT | 58.153 | 39.130 | 2.33 | 0.00 | 38.65 | 2.97 |
407 | 410 | 4.256110 | CTGAGTTTGTCATGTCCATGCTA | 58.744 | 43.478 | 2.33 | 0.00 | 38.65 | 3.49 |
408 | 411 | 3.079578 | CTGAGTTTGTCATGTCCATGCT | 58.920 | 45.455 | 2.33 | 0.00 | 38.65 | 3.79 |
409 | 412 | 2.816087 | ACTGAGTTTGTCATGTCCATGC | 59.184 | 45.455 | 2.33 | 0.00 | 38.65 | 4.06 |
410 | 413 | 3.189910 | CCACTGAGTTTGTCATGTCCATG | 59.810 | 47.826 | 0.71 | 0.71 | 40.09 | 3.66 |
424 | 433 | 4.653801 | TGTACATATATGGTGCCACTGAGT | 59.346 | 41.667 | 16.96 | 0.00 | 0.00 | 3.41 |
430 | 439 | 5.995446 | TGTTCTTGTACATATATGGTGCCA | 58.005 | 37.500 | 16.96 | 5.00 | 0.00 | 4.92 |
431 | 440 | 7.148407 | GCTATGTTCTTGTACATATATGGTGCC | 60.148 | 40.741 | 16.96 | 2.60 | 39.54 | 5.01 |
500 | 509 | 3.601443 | AGCTAAGAGACAGAACGCAAT | 57.399 | 42.857 | 0.00 | 0.00 | 0.00 | 3.56 |
550 | 559 | 7.094762 | GGATTGTACTCCTTGGTTCTAAACAAG | 60.095 | 40.741 | 12.58 | 12.58 | 42.77 | 3.16 |
630 | 640 | 0.107165 | GGGTATGGTTCTGGGTGAGC | 60.107 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
815 | 825 | 5.420739 | GGAGGAGGACTATATAGAGCTTTGG | 59.579 | 48.000 | 16.79 | 0.00 | 0.00 | 3.28 |
894 | 904 | 4.517934 | TACGGCGAGGGAGAGGGG | 62.518 | 72.222 | 16.62 | 0.00 | 0.00 | 4.79 |
1116 | 1132 | 4.382320 | GCCTTGTACCCGGACGCA | 62.382 | 66.667 | 0.73 | 0.00 | 0.00 | 5.24 |
1254 | 1270 | 3.864686 | ATGGCGCGCTTGCTTACG | 61.865 | 61.111 | 32.29 | 0.00 | 36.08 | 3.18 |
1281 | 1302 | 3.274586 | CGGATGACATGGCGCCAG | 61.275 | 66.667 | 35.36 | 26.66 | 0.00 | 4.85 |
1300 | 1321 | 2.284684 | CGAATCAGCGACACGAATTCAG | 60.285 | 50.000 | 6.22 | 0.00 | 0.00 | 3.02 |
1541 | 1568 | 1.188219 | ATCTCACCTGTGACGCCACT | 61.188 | 55.000 | 2.85 | 0.00 | 43.55 | 4.00 |
1693 | 1731 | 2.496070 | TCACGGGGACTATTTCTCACAG | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1718 | 1756 | 0.307760 | GGGTTGCCGCTAATCAATCG | 59.692 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
1732 | 1770 | 4.326766 | CGTGCGCTGTTGGGGTTG | 62.327 | 66.667 | 9.73 | 0.00 | 0.00 | 3.77 |
1878 | 1916 | 4.388499 | GAAGCTCGCCGGGTTGGA | 62.388 | 66.667 | 2.18 | 0.00 | 42.00 | 3.53 |
1946 | 1984 | 1.515088 | CGAGTGCGTCTGCCTGTAG | 60.515 | 63.158 | 0.00 | 0.00 | 41.78 | 2.74 |
2255 | 2293 | 2.202453 | GACGAGTTCTCGGGCGTC | 60.202 | 66.667 | 22.90 | 10.58 | 44.83 | 5.19 |
2386 | 2442 | 9.995957 | CGTACATACACATTGAATCCAAAAATA | 57.004 | 29.630 | 0.00 | 0.00 | 35.67 | 1.40 |
2387 | 2443 | 8.735315 | TCGTACATACACATTGAATCCAAAAAT | 58.265 | 29.630 | 0.00 | 0.00 | 35.67 | 1.82 |
2388 | 2444 | 8.100508 | TCGTACATACACATTGAATCCAAAAA | 57.899 | 30.769 | 0.00 | 0.00 | 35.67 | 1.94 |
2393 | 2449 | 6.705782 | CAACTCGTACATACACATTGAATCC | 58.294 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2394 | 2450 | 6.183360 | TGCAACTCGTACATACACATTGAATC | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
2397 | 2453 | 4.561105 | TGCAACTCGTACATACACATTGA | 58.439 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
2399 | 2455 | 5.874810 | AGAATGCAACTCGTACATACACATT | 59.125 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2435 | 2496 | 2.552743 | GCCGATAGCAGGTTAATTTCCC | 59.447 | 50.000 | 0.00 | 0.00 | 42.97 | 3.97 |
2473 | 2534 | 4.657824 | CGCCGTCACCACCGTCTT | 62.658 | 66.667 | 0.00 | 0.00 | 0.00 | 3.01 |
2498 | 2559 | 4.418401 | CGGTTGCCGGCCATGTTG | 62.418 | 66.667 | 26.77 | 4.91 | 44.15 | 3.33 |
2633 | 2799 | 2.069273 | GTGGTGCACTTGTAGTAGCTG | 58.931 | 52.381 | 17.98 | 0.00 | 0.00 | 4.24 |
3123 | 3289 | 0.874390 | TTGCCATTTCTGACACTCGC | 59.126 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3145 | 3311 | 2.842394 | AAGCTCCATCTCGCCGTGTG | 62.842 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
3151 | 3317 | 2.224161 | ACAGGATAAAGCTCCATCTCGC | 60.224 | 50.000 | 7.28 | 0.00 | 37.81 | 5.03 |
3231 | 3397 | 3.869623 | CAGCCCTCTGCAACTATGT | 57.130 | 52.632 | 0.00 | 0.00 | 44.83 | 2.29 |
3271 | 3440 | 6.882458 | ATATTTTCTTTACTCCGACGTGTC | 57.118 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
3359 | 3530 | 7.905604 | TTCAACAACATACTTCTATGTGGAG | 57.094 | 36.000 | 2.81 | 0.00 | 41.92 | 3.86 |
3426 | 3597 | 6.335777 | CACTATCTCATCATTCACACTGTGA | 58.664 | 40.000 | 15.86 | 7.84 | 41.09 | 3.58 |
3427 | 3598 | 5.522824 | CCACTATCTCATCATTCACACTGTG | 59.477 | 44.000 | 6.19 | 6.19 | 34.45 | 3.66 |
3428 | 3599 | 5.188555 | ACCACTATCTCATCATTCACACTGT | 59.811 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
3429 | 3600 | 5.668471 | ACCACTATCTCATCATTCACACTG | 58.332 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
3430 | 3601 | 5.946942 | ACCACTATCTCATCATTCACACT | 57.053 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
3431 | 3602 | 7.212976 | ACATACCACTATCTCATCATTCACAC | 58.787 | 38.462 | 0.00 | 0.00 | 0.00 | 3.82 |
3432 | 3603 | 7.365497 | ACATACCACTATCTCATCATTCACA | 57.635 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3471 | 3738 | 1.107114 | ATCTGAGGTCTGGTACGCTG | 58.893 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
3505 | 3772 | 9.202273 | GCAACTACAAAATGATTGGATTACAAA | 57.798 | 29.630 | 0.00 | 0.00 | 43.46 | 2.83 |
3506 | 3773 | 8.363390 | TGCAACTACAAAATGATTGGATTACAA | 58.637 | 29.630 | 0.00 | 0.00 | 44.54 | 2.41 |
3507 | 3774 | 7.812191 | GTGCAACTACAAAATGATTGGATTACA | 59.188 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
3508 | 3775 | 7.812191 | TGTGCAACTACAAAATGATTGGATTAC | 59.188 | 33.333 | 0.00 | 0.00 | 38.04 | 1.89 |
3509 | 3776 | 7.890515 | TGTGCAACTACAAAATGATTGGATTA | 58.109 | 30.769 | 0.00 | 0.00 | 38.04 | 1.75 |
3510 | 3777 | 6.757237 | TGTGCAACTACAAAATGATTGGATT | 58.243 | 32.000 | 0.00 | 0.00 | 38.04 | 3.01 |
3511 | 3778 | 6.343716 | TGTGCAACTACAAAATGATTGGAT | 57.656 | 33.333 | 0.00 | 0.00 | 38.04 | 3.41 |
3531 | 3798 | 5.664457 | TGATTGTTCAGTCTATAGCCTGTG | 58.336 | 41.667 | 10.43 | 0.00 | 0.00 | 3.66 |
3536 | 3803 | 9.922305 | GTATTGTTTGATTGTTCAGTCTATAGC | 57.078 | 33.333 | 0.00 | 0.00 | 32.27 | 2.97 |
3552 | 3819 | 8.740123 | ACCATAATTCGGTATGTATTGTTTGA | 57.260 | 30.769 | 0.00 | 0.00 | 34.02 | 2.69 |
3593 | 3860 | 4.019591 | AGTTCGGGCTTATAAAGTGGACTT | 60.020 | 41.667 | 0.00 | 0.00 | 37.91 | 3.01 |
3691 | 3958 | 1.549203 | GAGTGCATGGGTGGTGATTT | 58.451 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
3699 | 3966 | 3.661648 | GGGTGGGAGTGCATGGGT | 61.662 | 66.667 | 0.00 | 0.00 | 0.00 | 4.51 |
3733 | 4000 | 2.921121 | TCAAAATCGATGAAGTCGGTCG | 59.079 | 45.455 | 0.00 | 0.00 | 44.46 | 4.79 |
3734 | 4001 | 3.062234 | GGTCAAAATCGATGAAGTCGGTC | 59.938 | 47.826 | 0.00 | 0.00 | 44.46 | 4.79 |
3743 | 4010 | 2.073056 | TCACCACGGTCAAAATCGATG | 58.927 | 47.619 | 0.00 | 0.00 | 0.00 | 3.84 |
3745 | 4012 | 1.069513 | AGTCACCACGGTCAAAATCGA | 59.930 | 47.619 | 0.00 | 0.00 | 0.00 | 3.59 |
3757 | 4024 | 1.014564 | GCTAACTCGGCAGTCACCAC | 61.015 | 60.000 | 0.00 | 0.00 | 29.93 | 4.16 |
3783 | 4050 | 0.107703 | TCCACATTAAGGAGCTGGCG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
3788 | 4055 | 2.488153 | GTGTGGTTCCACATTAAGGAGC | 59.512 | 50.000 | 24.46 | 8.23 | 46.65 | 4.70 |
3806 | 4073 | 3.795688 | ATGGAGGTGTTTGATCTGTGT | 57.204 | 42.857 | 0.00 | 0.00 | 0.00 | 3.72 |
3816 | 4091 | 1.615392 | GCAAGAAGCAATGGAGGTGTT | 59.385 | 47.619 | 0.00 | 0.00 | 44.79 | 3.32 |
3845 | 4120 | 3.920093 | CTCGGGTGGTTGGGAAGGC | 62.920 | 68.421 | 0.00 | 0.00 | 0.00 | 4.35 |
3846 | 4121 | 2.351276 | CTCGGGTGGTTGGGAAGG | 59.649 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
3847 | 4122 | 1.196104 | TACCTCGGGTGGTTGGGAAG | 61.196 | 60.000 | 5.90 | 0.00 | 41.22 | 3.46 |
3848 | 4123 | 0.548197 | ATACCTCGGGTGGTTGGGAA | 60.548 | 55.000 | 5.90 | 0.00 | 41.22 | 3.97 |
3849 | 4124 | 0.548197 | AATACCTCGGGTGGTTGGGA | 60.548 | 55.000 | 5.90 | 0.00 | 41.22 | 4.37 |
3850 | 4125 | 0.393808 | CAATACCTCGGGTGGTTGGG | 60.394 | 60.000 | 5.90 | 0.00 | 41.22 | 4.12 |
3851 | 4126 | 0.326927 | ACAATACCTCGGGTGGTTGG | 59.673 | 55.000 | 18.16 | 0.00 | 41.22 | 3.77 |
3852 | 4127 | 1.810151 | CAACAATACCTCGGGTGGTTG | 59.190 | 52.381 | 15.42 | 15.42 | 41.22 | 3.77 |
3853 | 4128 | 1.884928 | GCAACAATACCTCGGGTGGTT | 60.885 | 52.381 | 5.90 | 5.25 | 41.22 | 3.67 |
3854 | 4129 | 0.322187 | GCAACAATACCTCGGGTGGT | 60.322 | 55.000 | 5.90 | 3.75 | 43.66 | 4.16 |
3855 | 4130 | 0.322098 | TGCAACAATACCTCGGGTGG | 60.322 | 55.000 | 5.90 | 0.00 | 36.19 | 4.61 |
3856 | 4131 | 0.802494 | GTGCAACAATACCTCGGGTG | 59.198 | 55.000 | 5.90 | 0.00 | 34.96 | 4.61 |
3857 | 4132 | 3.243128 | GTGCAACAATACCTCGGGT | 57.757 | 52.632 | 0.00 | 1.14 | 36.79 | 5.28 |
3873 | 4148 | 1.227999 | AACGGTCCGAAGCACATGTG | 61.228 | 55.000 | 21.83 | 21.83 | 0.00 | 3.21 |
3874 | 4149 | 1.070786 | AACGGTCCGAAGCACATGT | 59.929 | 52.632 | 20.51 | 0.00 | 0.00 | 3.21 |
3875 | 4150 | 0.948623 | TCAACGGTCCGAAGCACATG | 60.949 | 55.000 | 20.51 | 5.20 | 0.00 | 3.21 |
3876 | 4151 | 0.036388 | ATCAACGGTCCGAAGCACAT | 60.036 | 50.000 | 20.51 | 0.00 | 0.00 | 3.21 |
3877 | 4152 | 0.948623 | CATCAACGGTCCGAAGCACA | 60.949 | 55.000 | 20.51 | 0.00 | 0.00 | 4.57 |
3878 | 4153 | 0.949105 | ACATCAACGGTCCGAAGCAC | 60.949 | 55.000 | 20.51 | 0.00 | 0.00 | 4.40 |
3879 | 4154 | 0.669318 | GACATCAACGGTCCGAAGCA | 60.669 | 55.000 | 20.51 | 0.00 | 0.00 | 3.91 |
3880 | 4155 | 0.389948 | AGACATCAACGGTCCGAAGC | 60.390 | 55.000 | 20.51 | 0.00 | 35.89 | 3.86 |
3881 | 4156 | 2.163815 | AGTAGACATCAACGGTCCGAAG | 59.836 | 50.000 | 20.51 | 9.87 | 35.89 | 3.79 |
3882 | 4157 | 2.165167 | AGTAGACATCAACGGTCCGAA | 58.835 | 47.619 | 20.51 | 3.03 | 35.89 | 4.30 |
3883 | 4158 | 1.830279 | AGTAGACATCAACGGTCCGA | 58.170 | 50.000 | 20.51 | 0.00 | 35.89 | 4.55 |
3884 | 4159 | 2.421073 | TGTAGTAGACATCAACGGTCCG | 59.579 | 50.000 | 10.48 | 10.48 | 35.89 | 4.79 |
3885 | 4160 | 3.192001 | TGTGTAGTAGACATCAACGGTCC | 59.808 | 47.826 | 0.00 | 0.00 | 41.14 | 4.46 |
3886 | 4161 | 4.430137 | TGTGTAGTAGACATCAACGGTC | 57.570 | 45.455 | 0.00 | 0.00 | 41.14 | 4.79 |
3887 | 4162 | 4.553323 | GTTGTGTAGTAGACATCAACGGT | 58.447 | 43.478 | 0.29 | 0.00 | 41.14 | 4.83 |
3888 | 4163 | 3.924686 | GGTTGTGTAGTAGACATCAACGG | 59.075 | 47.826 | 0.29 | 0.00 | 43.52 | 4.44 |
3889 | 4164 | 4.806330 | AGGTTGTGTAGTAGACATCAACG | 58.194 | 43.478 | 0.29 | 0.00 | 43.52 | 4.10 |
3890 | 4165 | 6.456501 | AGAAGGTTGTGTAGTAGACATCAAC | 58.543 | 40.000 | 0.29 | 11.41 | 42.77 | 3.18 |
3891 | 4166 | 6.665992 | AGAAGGTTGTGTAGTAGACATCAA | 57.334 | 37.500 | 0.29 | 0.00 | 41.14 | 2.57 |
3892 | 4167 | 6.493802 | AGAAGAAGGTTGTGTAGTAGACATCA | 59.506 | 38.462 | 0.29 | 0.00 | 41.14 | 3.07 |
3893 | 4168 | 6.926313 | AGAAGAAGGTTGTGTAGTAGACATC | 58.074 | 40.000 | 0.29 | 0.61 | 41.14 | 3.06 |
3894 | 4169 | 6.919775 | AGAAGAAGGTTGTGTAGTAGACAT | 57.080 | 37.500 | 0.29 | 0.00 | 41.14 | 3.06 |
3895 | 4170 | 6.097839 | ACAAGAAGAAGGTTGTGTAGTAGACA | 59.902 | 38.462 | 0.00 | 0.00 | 35.55 | 3.41 |
3896 | 4171 | 6.514063 | ACAAGAAGAAGGTTGTGTAGTAGAC | 58.486 | 40.000 | 0.00 | 0.00 | 35.55 | 2.59 |
3897 | 4172 | 6.726490 | ACAAGAAGAAGGTTGTGTAGTAGA | 57.274 | 37.500 | 0.00 | 0.00 | 35.55 | 2.59 |
3898 | 4173 | 7.808856 | GTCTACAAGAAGAAGGTTGTGTAGTAG | 59.191 | 40.741 | 8.12 | 0.00 | 39.49 | 2.57 |
3899 | 4174 | 7.521099 | CGTCTACAAGAAGAAGGTTGTGTAGTA | 60.521 | 40.741 | 8.12 | 0.00 | 39.49 | 1.82 |
3900 | 4175 | 6.514063 | GTCTACAAGAAGAAGGTTGTGTAGT | 58.486 | 40.000 | 8.12 | 0.00 | 39.49 | 2.73 |
3901 | 4176 | 5.629849 | CGTCTACAAGAAGAAGGTTGTGTAG | 59.370 | 44.000 | 0.00 | 0.00 | 39.72 | 2.74 |
3902 | 4177 | 5.068198 | ACGTCTACAAGAAGAAGGTTGTGTA | 59.932 | 40.000 | 0.00 | 0.00 | 37.46 | 2.90 |
3903 | 4178 | 4.142004 | ACGTCTACAAGAAGAAGGTTGTGT | 60.142 | 41.667 | 0.00 | 0.00 | 37.46 | 3.72 |
3904 | 4179 | 4.369182 | ACGTCTACAAGAAGAAGGTTGTG | 58.631 | 43.478 | 0.00 | 0.00 | 37.46 | 3.33 |
3905 | 4180 | 4.667519 | ACGTCTACAAGAAGAAGGTTGT | 57.332 | 40.909 | 0.00 | 0.00 | 40.08 | 3.32 |
3906 | 4181 | 4.809426 | ACAACGTCTACAAGAAGAAGGTTG | 59.191 | 41.667 | 13.28 | 13.28 | 42.32 | 3.77 |
3907 | 4182 | 5.019785 | ACAACGTCTACAAGAAGAAGGTT | 57.980 | 39.130 | 0.00 | 0.00 | 30.29 | 3.50 |
3908 | 4183 | 4.667519 | ACAACGTCTACAAGAAGAAGGT | 57.332 | 40.909 | 0.00 | 0.00 | 30.29 | 3.50 |
3909 | 4184 | 4.211374 | CCAACAACGTCTACAAGAAGAAGG | 59.789 | 45.833 | 0.00 | 0.00 | 30.29 | 3.46 |
3910 | 4185 | 4.211374 | CCCAACAACGTCTACAAGAAGAAG | 59.789 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
3911 | 4186 | 4.124238 | CCCAACAACGTCTACAAGAAGAA | 58.876 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
3912 | 4187 | 3.724374 | CCCAACAACGTCTACAAGAAGA | 58.276 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
3913 | 4188 | 2.223377 | GCCCAACAACGTCTACAAGAAG | 59.777 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3914 | 4189 | 2.215196 | GCCCAACAACGTCTACAAGAA | 58.785 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
3915 | 4190 | 1.541670 | GGCCCAACAACGTCTACAAGA | 60.542 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
3916 | 4191 | 0.872388 | GGCCCAACAACGTCTACAAG | 59.128 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3917 | 4192 | 0.470766 | AGGCCCAACAACGTCTACAA | 59.529 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3918 | 4193 | 0.034337 | GAGGCCCAACAACGTCTACA | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3919 | 4194 | 0.672711 | GGAGGCCCAACAACGTCTAC | 60.673 | 60.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3920 | 4195 | 1.122632 | TGGAGGCCCAACAACGTCTA | 61.123 | 55.000 | 0.00 | 0.00 | 40.09 | 2.59 |
3921 | 4196 | 1.990160 | TTGGAGGCCCAACAACGTCT | 61.990 | 55.000 | 0.00 | 0.00 | 46.94 | 4.18 |
3922 | 4197 | 1.515521 | CTTGGAGGCCCAACAACGTC | 61.516 | 60.000 | 0.00 | 0.00 | 46.94 | 4.34 |
3923 | 4198 | 1.528309 | CTTGGAGGCCCAACAACGT | 60.528 | 57.895 | 0.00 | 0.00 | 46.94 | 3.99 |
3924 | 4199 | 1.528309 | ACTTGGAGGCCCAACAACG | 60.528 | 57.895 | 0.00 | 0.00 | 46.94 | 4.10 |
3925 | 4200 | 2.041153 | CACTTGGAGGCCCAACAAC | 58.959 | 57.895 | 0.00 | 0.00 | 46.94 | 3.32 |
3926 | 4201 | 1.832167 | GCACTTGGAGGCCCAACAA | 60.832 | 57.895 | 0.00 | 1.03 | 46.94 | 2.83 |
3927 | 4202 | 2.203480 | GCACTTGGAGGCCCAACA | 60.203 | 61.111 | 0.00 | 0.00 | 46.94 | 3.33 |
3928 | 4203 | 2.203480 | TGCACTTGGAGGCCCAAC | 60.203 | 61.111 | 0.00 | 0.00 | 46.94 | 3.77 |
3930 | 4205 | 2.853542 | TCTGCACTTGGAGGCCCA | 60.854 | 61.111 | 0.00 | 0.00 | 41.64 | 5.36 |
3931 | 4206 | 2.045536 | CTCTGCACTTGGAGGCCC | 60.046 | 66.667 | 0.00 | 0.00 | 34.00 | 5.80 |
3932 | 4207 | 2.045536 | CCTCTGCACTTGGAGGCC | 60.046 | 66.667 | 6.78 | 0.00 | 41.92 | 5.19 |
3935 | 4210 | 1.972872 | ACAAACCTCTGCACTTGGAG | 58.027 | 50.000 | 2.33 | 0.00 | 34.56 | 3.86 |
3936 | 4211 | 2.224523 | CCTACAAACCTCTGCACTTGGA | 60.225 | 50.000 | 2.33 | 0.00 | 0.00 | 3.53 |
3937 | 4212 | 2.154462 | CCTACAAACCTCTGCACTTGG | 58.846 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
3938 | 4213 | 2.808543 | GTCCTACAAACCTCTGCACTTG | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3939 | 4214 | 2.438021 | TGTCCTACAAACCTCTGCACTT | 59.562 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
3940 | 4215 | 2.037772 | CTGTCCTACAAACCTCTGCACT | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
3941 | 4216 | 2.224305 | ACTGTCCTACAAACCTCTGCAC | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
3942 | 4217 | 2.047061 | ACTGTCCTACAAACCTCTGCA | 58.953 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
3943 | 4218 | 2.841442 | ACTGTCCTACAAACCTCTGC | 57.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3944 | 4219 | 3.258372 | TGCTACTGTCCTACAAACCTCTG | 59.742 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
3945 | 4220 | 3.507411 | TGCTACTGTCCTACAAACCTCT | 58.493 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
3946 | 4221 | 3.955650 | TGCTACTGTCCTACAAACCTC | 57.044 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
3947 | 4222 | 4.699925 | TTTGCTACTGTCCTACAAACCT | 57.300 | 40.909 | 0.00 | 0.00 | 0.00 | 3.50 |
3948 | 4223 | 5.959618 | AATTTGCTACTGTCCTACAAACC | 57.040 | 39.130 | 0.00 | 0.00 | 33.46 | 3.27 |
3949 | 4224 | 6.379386 | GGAAATTTGCTACTGTCCTACAAAC | 58.621 | 40.000 | 1.93 | 0.00 | 33.46 | 2.93 |
3950 | 4225 | 5.475564 | GGGAAATTTGCTACTGTCCTACAAA | 59.524 | 40.000 | 9.70 | 0.00 | 34.97 | 2.83 |
3951 | 4226 | 5.007682 | GGGAAATTTGCTACTGTCCTACAA | 58.992 | 41.667 | 9.70 | 0.00 | 0.00 | 2.41 |
3952 | 4227 | 4.288626 | AGGGAAATTTGCTACTGTCCTACA | 59.711 | 41.667 | 9.70 | 0.00 | 0.00 | 2.74 |
3953 | 4228 | 4.844884 | AGGGAAATTTGCTACTGTCCTAC | 58.155 | 43.478 | 9.70 | 0.00 | 0.00 | 3.18 |
3954 | 4229 | 4.534500 | TGAGGGAAATTTGCTACTGTCCTA | 59.466 | 41.667 | 9.70 | 0.00 | 0.00 | 2.94 |
3955 | 4230 | 3.330701 | TGAGGGAAATTTGCTACTGTCCT | 59.669 | 43.478 | 9.70 | 0.00 | 0.00 | 3.85 |
3956 | 4231 | 3.686016 | TGAGGGAAATTTGCTACTGTCC | 58.314 | 45.455 | 9.70 | 0.00 | 0.00 | 4.02 |
3957 | 4232 | 5.904362 | ATTGAGGGAAATTTGCTACTGTC | 57.096 | 39.130 | 9.70 | 0.77 | 0.00 | 3.51 |
3958 | 4233 | 7.175104 | TCTAATTGAGGGAAATTTGCTACTGT | 58.825 | 34.615 | 9.70 | 0.00 | 32.16 | 3.55 |
3959 | 4234 | 7.630242 | TCTAATTGAGGGAAATTTGCTACTG | 57.370 | 36.000 | 9.70 | 0.00 | 32.16 | 2.74 |
3960 | 4235 | 8.055181 | TCATCTAATTGAGGGAAATTTGCTACT | 58.945 | 33.333 | 9.70 | 0.00 | 32.16 | 2.57 |
3961 | 4236 | 8.131731 | GTCATCTAATTGAGGGAAATTTGCTAC | 58.868 | 37.037 | 9.70 | 4.95 | 32.16 | 3.58 |
3962 | 4237 | 7.285401 | GGTCATCTAATTGAGGGAAATTTGCTA | 59.715 | 37.037 | 9.70 | 0.00 | 32.16 | 3.49 |
3963 | 4238 | 6.097412 | GGTCATCTAATTGAGGGAAATTTGCT | 59.903 | 38.462 | 9.70 | 0.00 | 32.16 | 3.91 |
3964 | 4239 | 6.097412 | AGGTCATCTAATTGAGGGAAATTTGC | 59.903 | 38.462 | 0.22 | 0.22 | 32.16 | 3.68 |
3965 | 4240 | 7.651027 | AGGTCATCTAATTGAGGGAAATTTG | 57.349 | 36.000 | 0.00 | 0.00 | 32.16 | 2.32 |
3966 | 4241 | 9.413734 | CTTAGGTCATCTAATTGAGGGAAATTT | 57.586 | 33.333 | 0.00 | 0.00 | 37.33 | 1.82 |
3967 | 4242 | 8.781951 | TCTTAGGTCATCTAATTGAGGGAAATT | 58.218 | 33.333 | 0.00 | 0.00 | 37.33 | 1.82 |
3968 | 4243 | 8.337118 | TCTTAGGTCATCTAATTGAGGGAAAT | 57.663 | 34.615 | 0.00 | 0.00 | 37.33 | 2.17 |
3969 | 4244 | 7.749377 | TCTTAGGTCATCTAATTGAGGGAAA | 57.251 | 36.000 | 0.00 | 0.00 | 37.33 | 3.13 |
3970 | 4245 | 7.937700 | ATCTTAGGTCATCTAATTGAGGGAA | 57.062 | 36.000 | 0.00 | 0.00 | 37.33 | 3.97 |
3971 | 4246 | 7.937700 | AATCTTAGGTCATCTAATTGAGGGA | 57.062 | 36.000 | 0.00 | 0.00 | 37.33 | 4.20 |
3979 | 4254 | 9.929180 | CGGATTGATAAATCTTAGGTCATCTAA | 57.071 | 33.333 | 2.71 | 0.00 | 36.58 | 2.10 |
3980 | 4255 | 9.090103 | ACGGATTGATAAATCTTAGGTCATCTA | 57.910 | 33.333 | 2.71 | 0.00 | 0.00 | 1.98 |
3981 | 4256 | 7.875041 | CACGGATTGATAAATCTTAGGTCATCT | 59.125 | 37.037 | 2.71 | 0.00 | 0.00 | 2.90 |
3982 | 4257 | 7.118390 | CCACGGATTGATAAATCTTAGGTCATC | 59.882 | 40.741 | 2.71 | 0.00 | 0.00 | 2.92 |
3983 | 4258 | 6.936900 | CCACGGATTGATAAATCTTAGGTCAT | 59.063 | 38.462 | 2.71 | 0.00 | 0.00 | 3.06 |
3984 | 4259 | 6.288294 | CCACGGATTGATAAATCTTAGGTCA | 58.712 | 40.000 | 2.71 | 0.00 | 0.00 | 4.02 |
3985 | 4260 | 5.701290 | CCCACGGATTGATAAATCTTAGGTC | 59.299 | 44.000 | 2.71 | 0.00 | 0.00 | 3.85 |
3986 | 4261 | 5.368523 | TCCCACGGATTGATAAATCTTAGGT | 59.631 | 40.000 | 2.71 | 0.00 | 0.00 | 3.08 |
3987 | 4262 | 5.865085 | TCCCACGGATTGATAAATCTTAGG | 58.135 | 41.667 | 2.71 | 2.67 | 0.00 | 2.69 |
3988 | 4263 | 5.934625 | CCTCCCACGGATTGATAAATCTTAG | 59.065 | 44.000 | 2.71 | 0.00 | 0.00 | 2.18 |
3989 | 4264 | 5.368523 | ACCTCCCACGGATTGATAAATCTTA | 59.631 | 40.000 | 2.71 | 0.00 | 0.00 | 2.10 |
3990 | 4265 | 4.166144 | ACCTCCCACGGATTGATAAATCTT | 59.834 | 41.667 | 2.71 | 0.00 | 0.00 | 2.40 |
3991 | 4266 | 3.716872 | ACCTCCCACGGATTGATAAATCT | 59.283 | 43.478 | 2.71 | 0.00 | 0.00 | 2.40 |
3992 | 4267 | 3.815401 | CACCTCCCACGGATTGATAAATC | 59.185 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
3993 | 4268 | 3.202151 | ACACCTCCCACGGATTGATAAAT | 59.798 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
3994 | 4269 | 2.574369 | ACACCTCCCACGGATTGATAAA | 59.426 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
3995 | 4270 | 2.193127 | ACACCTCCCACGGATTGATAA | 58.807 | 47.619 | 0.00 | 0.00 | 0.00 | 1.75 |
3996 | 4271 | 1.874129 | ACACCTCCCACGGATTGATA | 58.126 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
3997 | 4272 | 1.762957 | CTACACCTCCCACGGATTGAT | 59.237 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
3998 | 4273 | 1.191535 | CTACACCTCCCACGGATTGA | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3999 | 4274 | 0.178068 | CCTACACCTCCCACGGATTG | 59.822 | 60.000 | 0.00 | 0.00 | 0.00 | 2.67 |
4000 | 4275 | 0.042131 | TCCTACACCTCCCACGGATT | 59.958 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4001 | 4276 | 0.264955 | ATCCTACACCTCCCACGGAT | 59.735 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4002 | 4277 | 0.686441 | CATCCTACACCTCCCACGGA | 60.686 | 60.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4003 | 4278 | 0.686441 | TCATCCTACACCTCCCACGG | 60.686 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4004 | 4279 | 1.137086 | CTTCATCCTACACCTCCCACG | 59.863 | 57.143 | 0.00 | 0.00 | 0.00 | 4.94 |
4005 | 4280 | 2.467880 | TCTTCATCCTACACCTCCCAC | 58.532 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
4006 | 4281 | 2.940514 | TCTTCATCCTACACCTCCCA | 57.059 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
4007 | 4282 | 2.370189 | CCATCTTCATCCTACACCTCCC | 59.630 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
4008 | 4283 | 3.041946 | ACCATCTTCATCCTACACCTCC | 58.958 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4009 | 4284 | 3.964031 | AGACCATCTTCATCCTACACCTC | 59.036 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
4010 | 4285 | 3.964031 | GAGACCATCTTCATCCTACACCT | 59.036 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
4011 | 4286 | 3.964031 | AGAGACCATCTTCATCCTACACC | 59.036 | 47.826 | 0.00 | 0.00 | 32.99 | 4.16 |
4012 | 4287 | 4.892934 | AGAGAGACCATCTTCATCCTACAC | 59.107 | 45.833 | 0.00 | 0.00 | 38.84 | 2.90 |
4013 | 4288 | 5.136068 | AGAGAGACCATCTTCATCCTACA | 57.864 | 43.478 | 0.00 | 0.00 | 38.84 | 2.74 |
4014 | 4289 | 5.136828 | TGAGAGAGACCATCTTCATCCTAC | 58.863 | 45.833 | 0.00 | 0.00 | 38.84 | 3.18 |
4015 | 4290 | 5.394562 | TGAGAGAGACCATCTTCATCCTA | 57.605 | 43.478 | 0.00 | 0.00 | 38.84 | 2.94 |
4016 | 4291 | 4.262891 | TGAGAGAGACCATCTTCATCCT | 57.737 | 45.455 | 0.00 | 0.00 | 38.84 | 3.24 |
4017 | 4292 | 4.740334 | GCTTGAGAGAGACCATCTTCATCC | 60.740 | 50.000 | 0.00 | 0.00 | 38.84 | 3.51 |
4018 | 4293 | 4.141981 | TGCTTGAGAGAGACCATCTTCATC | 60.142 | 45.833 | 0.00 | 0.00 | 38.84 | 2.92 |
4019 | 4294 | 3.773667 | TGCTTGAGAGAGACCATCTTCAT | 59.226 | 43.478 | 0.00 | 0.00 | 38.84 | 2.57 |
4020 | 4295 | 3.168292 | TGCTTGAGAGAGACCATCTTCA | 58.832 | 45.455 | 0.00 | 0.00 | 38.84 | 3.02 |
4021 | 4296 | 3.883830 | TGCTTGAGAGAGACCATCTTC | 57.116 | 47.619 | 0.00 | 0.00 | 38.84 | 2.87 |
4022 | 4297 | 3.307339 | GGTTGCTTGAGAGAGACCATCTT | 60.307 | 47.826 | 0.00 | 0.00 | 38.84 | 2.40 |
4023 | 4298 | 2.235898 | GGTTGCTTGAGAGAGACCATCT | 59.764 | 50.000 | 0.00 | 0.00 | 42.61 | 2.90 |
4024 | 4299 | 2.626840 | GGTTGCTTGAGAGAGACCATC | 58.373 | 52.381 | 0.00 | 0.00 | 32.64 | 3.51 |
4025 | 4300 | 1.280421 | GGGTTGCTTGAGAGAGACCAT | 59.720 | 52.381 | 0.00 | 0.00 | 33.49 | 3.55 |
4026 | 4301 | 0.687354 | GGGTTGCTTGAGAGAGACCA | 59.313 | 55.000 | 0.00 | 0.00 | 33.49 | 4.02 |
4027 | 4302 | 0.980423 | AGGGTTGCTTGAGAGAGACC | 59.020 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4028 | 4303 | 1.943507 | GCAGGGTTGCTTGAGAGAGAC | 60.944 | 57.143 | 0.00 | 0.00 | 46.95 | 3.36 |
4029 | 4304 | 0.322975 | GCAGGGTTGCTTGAGAGAGA | 59.677 | 55.000 | 0.00 | 0.00 | 46.95 | 3.10 |
4030 | 4305 | 2.851798 | GCAGGGTTGCTTGAGAGAG | 58.148 | 57.895 | 0.00 | 0.00 | 46.95 | 3.20 |
4040 | 4315 | 3.742433 | TGTTATTTGGTTGCAGGGTTG | 57.258 | 42.857 | 0.00 | 0.00 | 0.00 | 3.77 |
4041 | 4316 | 4.407296 | TCTTTGTTATTTGGTTGCAGGGTT | 59.593 | 37.500 | 0.00 | 0.00 | 0.00 | 4.11 |
4042 | 4317 | 3.964031 | TCTTTGTTATTTGGTTGCAGGGT | 59.036 | 39.130 | 0.00 | 0.00 | 0.00 | 4.34 |
4043 | 4318 | 4.039124 | ACTCTTTGTTATTTGGTTGCAGGG | 59.961 | 41.667 | 0.00 | 0.00 | 0.00 | 4.45 |
4044 | 4319 | 5.010012 | AGACTCTTTGTTATTTGGTTGCAGG | 59.990 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4045 | 4320 | 6.016777 | AGAGACTCTTTGTTATTTGGTTGCAG | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 4.41 |
4046 | 4321 | 5.827797 | AGAGACTCTTTGTTATTTGGTTGCA | 59.172 | 36.000 | 0.00 | 0.00 | 0.00 | 4.08 |
4047 | 4322 | 6.319141 | AGAGACTCTTTGTTATTTGGTTGC | 57.681 | 37.500 | 0.00 | 0.00 | 0.00 | 4.17 |
4048 | 4323 | 7.645340 | CACAAGAGACTCTTTGTTATTTGGTTG | 59.355 | 37.037 | 15.24 | 2.96 | 33.78 | 3.77 |
4049 | 4324 | 7.339466 | ACACAAGAGACTCTTTGTTATTTGGTT | 59.661 | 33.333 | 15.24 | 0.00 | 33.78 | 3.67 |
4050 | 4325 | 6.828785 | ACACAAGAGACTCTTTGTTATTTGGT | 59.171 | 34.615 | 15.24 | 4.31 | 33.78 | 3.67 |
4051 | 4326 | 7.264373 | ACACAAGAGACTCTTTGTTATTTGG | 57.736 | 36.000 | 15.24 | 3.69 | 33.78 | 3.28 |
4052 | 4327 | 7.355778 | GGACACAAGAGACTCTTTGTTATTTG | 58.644 | 38.462 | 22.64 | 12.21 | 33.78 | 2.32 |
4053 | 4328 | 6.486993 | GGGACACAAGAGACTCTTTGTTATTT | 59.513 | 38.462 | 22.64 | 9.20 | 33.78 | 1.40 |
4054 | 4329 | 5.998363 | GGGACACAAGAGACTCTTTGTTATT | 59.002 | 40.000 | 22.64 | 10.86 | 33.78 | 1.40 |
4055 | 4330 | 5.513267 | GGGGACACAAGAGACTCTTTGTTAT | 60.513 | 44.000 | 22.64 | 13.25 | 33.78 | 1.89 |
4056 | 4331 | 4.202326 | GGGGACACAAGAGACTCTTTGTTA | 60.202 | 45.833 | 22.64 | 0.00 | 33.78 | 2.41 |
4057 | 4332 | 3.433740 | GGGGACACAAGAGACTCTTTGTT | 60.434 | 47.826 | 22.64 | 10.17 | 33.78 | 2.83 |
4058 | 4333 | 2.104963 | GGGGACACAAGAGACTCTTTGT | 59.895 | 50.000 | 22.26 | 22.26 | 33.78 | 2.83 |
4059 | 4334 | 2.104792 | TGGGGACACAAGAGACTCTTTG | 59.895 | 50.000 | 15.24 | 17.09 | 31.62 | 2.77 |
4060 | 4335 | 2.408565 | TGGGGACACAAGAGACTCTTT | 58.591 | 47.619 | 15.24 | 1.05 | 31.62 | 2.52 |
4061 | 4336 | 2.103153 | TGGGGACACAAGAGACTCTT | 57.897 | 50.000 | 12.12 | 12.12 | 33.63 | 2.85 |
4062 | 4337 | 1.694696 | GTTGGGGACACAAGAGACTCT | 59.305 | 52.381 | 0.00 | 0.00 | 42.67 | 3.24 |
4063 | 4338 | 1.416401 | TGTTGGGGACACAAGAGACTC | 59.584 | 52.381 | 0.00 | 0.00 | 42.67 | 3.36 |
4064 | 4339 | 1.507140 | TGTTGGGGACACAAGAGACT | 58.493 | 50.000 | 0.00 | 0.00 | 42.67 | 3.24 |
4073 | 4348 | 1.149986 | TATTGGGTGTGTTGGGGACA | 58.850 | 50.000 | 0.00 | 0.00 | 39.83 | 4.02 |
4074 | 4349 | 1.202952 | TGTATTGGGTGTGTTGGGGAC | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
4075 | 4350 | 1.149986 | TGTATTGGGTGTGTTGGGGA | 58.850 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
4076 | 4351 | 2.002505 | TTGTATTGGGTGTGTTGGGG | 57.997 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
4077 | 4352 | 2.233431 | CCATTGTATTGGGTGTGTTGGG | 59.767 | 50.000 | 0.00 | 0.00 | 32.80 | 4.12 |
4078 | 4353 | 2.896685 | ACCATTGTATTGGGTGTGTTGG | 59.103 | 45.455 | 0.00 | 0.00 | 41.35 | 3.77 |
4079 | 4354 | 5.713792 | TTACCATTGTATTGGGTGTGTTG | 57.286 | 39.130 | 0.00 | 0.00 | 41.35 | 3.33 |
4080 | 4355 | 6.926630 | ATTTACCATTGTATTGGGTGTGTT | 57.073 | 33.333 | 0.00 | 0.00 | 41.35 | 3.32 |
4081 | 4356 | 6.268847 | ACAATTTACCATTGTATTGGGTGTGT | 59.731 | 34.615 | 0.00 | 0.00 | 40.12 | 3.72 |
4082 | 4357 | 6.696411 | ACAATTTACCATTGTATTGGGTGTG | 58.304 | 36.000 | 0.00 | 0.00 | 40.12 | 3.82 |
4083 | 4358 | 6.926630 | ACAATTTACCATTGTATTGGGTGT | 57.073 | 33.333 | 0.00 | 0.00 | 40.12 | 4.16 |
4088 | 4363 | 9.677567 | GCACCTATACAATTTACCATTGTATTG | 57.322 | 33.333 | 20.03 | 17.89 | 46.90 | 1.90 |
4089 | 4364 | 9.415008 | TGCACCTATACAATTTACCATTGTATT | 57.585 | 29.630 | 20.03 | 5.46 | 46.90 | 1.89 |
4091 | 4366 | 8.050325 | AGTGCACCTATACAATTTACCATTGTA | 58.950 | 33.333 | 14.63 | 9.30 | 45.16 | 2.41 |
4092 | 4367 | 6.889722 | AGTGCACCTATACAATTTACCATTGT | 59.110 | 34.615 | 14.63 | 5.58 | 43.74 | 2.71 |
4093 | 4368 | 7.333528 | AGTGCACCTATACAATTTACCATTG | 57.666 | 36.000 | 14.63 | 0.00 | 35.29 | 2.82 |
4094 | 4369 | 8.677148 | CTAGTGCACCTATACAATTTACCATT | 57.323 | 34.615 | 14.63 | 0.00 | 0.00 | 3.16 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.