Multiple sequence alignment - TraesCS3D01G334900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G334900 chr3D 100.000 5147 0 0 1 5147 446909050 446914196 0.000000e+00 9505.0
1 TraesCS3D01G334900 chr3D 86.167 694 75 14 17 700 550271186 550271868 0.000000e+00 730.0
2 TraesCS3D01G334900 chr3D 87.231 603 54 12 1577 2162 446854666 446855262 0.000000e+00 665.0
3 TraesCS3D01G334900 chr3D 91.295 448 35 2 3582 4029 446855798 446856241 4.410000e-170 608.0
4 TraesCS3D01G334900 chr3D 88.542 480 41 9 2151 2628 446855303 446855770 2.080000e-158 569.0
5 TraesCS3D01G334900 chr3D 95.252 337 16 0 1032 1368 446854218 446854554 7.590000e-148 534.0
6 TraesCS3D01G334900 chr3D 79.012 162 22 8 2714 2868 600656255 600656411 3.280000e-17 100.0
7 TraesCS3D01G334900 chr3B 89.140 1768 136 32 2945 4663 586425926 586427686 0.000000e+00 2150.0
8 TraesCS3D01G334900 chr3B 91.750 1406 57 22 17 1382 586420908 586422294 0.000000e+00 1899.0
9 TraesCS3D01G334900 chr3B 89.501 1524 86 35 1475 2947 586422292 586423792 0.000000e+00 1860.0
10 TraesCS3D01G334900 chr3B 86.504 615 53 11 1569 2162 586341412 586342017 0.000000e+00 649.0
11 TraesCS3D01G334900 chr3B 92.411 448 30 2 3582 4029 586342537 586342980 2.020000e-178 636.0
12 TraesCS3D01G334900 chr3B 91.919 396 31 1 2174 2569 586342075 586342469 2.090000e-153 553.0
13 TraesCS3D01G334900 chr3B 90.544 349 21 2 1032 1368 586340954 586341302 7.860000e-123 451.0
14 TraesCS3D01G334900 chr3B 82.979 94 14 2 1381 1473 214541176 214541084 3.300000e-12 84.2
15 TraesCS3D01G334900 chr3B 91.667 48 4 0 1380 1427 140986748 140986701 3.330000e-07 67.6
16 TraesCS3D01G334900 chr3A 91.164 1177 72 15 1833 2991 588725265 588726427 0.000000e+00 1568.0
17 TraesCS3D01G334900 chr3A 87.903 868 68 19 3458 4299 588727882 588728738 0.000000e+00 987.0
18 TraesCS3D01G334900 chr3A 91.272 676 48 6 17 689 588689748 588690415 0.000000e+00 911.0
19 TraesCS3D01G334900 chr3A 89.545 660 21 18 738 1382 588724222 588724848 0.000000e+00 793.0
20 TraesCS3D01G334900 chr3A 84.897 682 88 11 17 691 277541037 277541710 0.000000e+00 675.0
21 TraesCS3D01G334900 chr3A 92.067 416 33 0 3586 4001 588659291 588659706 2.060000e-163 586.0
22 TraesCS3D01G334900 chr3A 92.603 365 26 1 2203 2567 588658841 588659204 1.640000e-144 523.0
23 TraesCS3D01G334900 chr3A 92.625 339 22 3 2983 3318 588727495 588727833 7.750000e-133 484.0
24 TraesCS3D01G334900 chr3A 92.151 344 8 7 1475 1818 588724846 588725170 7.800000e-128 468.0
25 TraesCS3D01G334900 chr3A 90.137 365 22 10 1016 1368 588657662 588658024 3.630000e-126 462.0
26 TraesCS3D01G334900 chr3A 90.735 313 23 2 1850 2162 588658445 588658751 3.710000e-111 412.0
27 TraesCS3D01G334900 chr3A 82.172 488 54 22 4225 4683 588728706 588729189 6.250000e-104 388.0
28 TraesCS3D01G334900 chr3A 82.328 464 46 15 4686 5120 33972164 33972620 2.260000e-98 370.0
29 TraesCS3D01G334900 chr3A 91.200 250 17 4 1555 1803 588658131 588658376 8.260000e-88 335.0
30 TraesCS3D01G334900 chr3A 90.278 72 6 1 696 767 588690722 588690792 5.490000e-15 93.5
31 TraesCS3D01G334900 chr3A 76.543 162 27 8 2714 2868 730086778 730086935 1.540000e-10 78.7
32 TraesCS3D01G334900 chr2A 86.095 676 75 14 17 680 535834267 535834935 0.000000e+00 710.0
33 TraesCS3D01G334900 chr2A 84.348 345 41 10 4779 5121 41468111 41468444 4.970000e-85 326.0
34 TraesCS3D01G334900 chr2A 89.071 183 14 4 4684 4865 41467990 41468167 6.710000e-54 222.0
35 TraesCS3D01G334900 chr2A 82.524 103 16 2 1376 1477 419654380 419654481 7.100000e-14 89.8
36 TraesCS3D01G334900 chr4D 85.486 689 87 11 17 697 83849394 83850077 0.000000e+00 706.0
37 TraesCS3D01G334900 chr2D 86.743 611 62 14 17 616 398645647 398646249 0.000000e+00 662.0
38 TraesCS3D01G334900 chr2D 84.501 671 93 8 17 681 521409460 521408795 0.000000e+00 652.0
39 TraesCS3D01G334900 chr2D 83.309 695 91 19 18 703 209119305 209118627 7.320000e-173 617.0
40 TraesCS3D01G334900 chr2D 78.710 155 25 6 2711 2858 21194052 21193899 4.240000e-16 97.1
41 TraesCS3D01G334900 chr2D 94.737 38 2 0 1381 1418 62613859 62613822 5.570000e-05 60.2
42 TraesCS3D01G334900 chr1D 84.422 597 54 23 1579 2136 261881237 261880641 7.530000e-153 551.0
43 TraesCS3D01G334900 chr1D 87.363 364 34 8 2211 2565 261880533 261880173 1.730000e-109 407.0
44 TraesCS3D01G334900 chr1D 87.907 215 25 1 3582 3795 261880083 261879869 8.560000e-63 252.0
45 TraesCS3D01G334900 chr1D 88.889 180 20 0 3792 3971 261879713 261879534 6.710000e-54 222.0
46 TraesCS3D01G334900 chr1D 87.135 171 19 3 4718 4887 40794129 40793961 1.890000e-44 191.0
47 TraesCS3D01G334900 chr1D 90.071 141 10 2 4981 5120 40793890 40793753 4.090000e-41 180.0
48 TraesCS3D01G334900 chr1D 88.462 78 8 1 725 802 58506064 58505988 5.490000e-15 93.5
49 TraesCS3D01G334900 chr1A 83.752 597 57 23 1579 2136 337985564 337986159 3.530000e-146 529.0
50 TraesCS3D01G334900 chr1A 83.223 453 53 13 4684 5120 442126326 442126771 1.340000e-105 394.0
51 TraesCS3D01G334900 chr1A 85.535 318 35 6 1060 1367 337981721 337982037 6.430000e-84 322.0
52 TraesCS3D01G334900 chr1A 88.995 209 23 0 3587 3795 337986732 337986940 5.110000e-65 259.0
53 TraesCS3D01G334900 chr1A 83.276 293 20 16 4716 4987 493283793 493283509 5.150000e-60 243.0
54 TraesCS3D01G334900 chr1A 86.188 181 18 3 3792 3971 337987267 337987441 6.800000e-44 189.0
55 TraesCS3D01G334900 chr1B 83.388 608 58 25 1571 2136 349839423 349840029 1.640000e-144 523.0
56 TraesCS3D01G334900 chr1B 85.144 451 46 16 4684 5120 296672258 296672701 4.730000e-120 442.0
57 TraesCS3D01G334900 chr1B 87.535 361 33 7 2211 2562 349840138 349840495 1.730000e-109 407.0
58 TraesCS3D01G334900 chr1B 86.061 330 31 7 1060 1377 349838135 349838461 1.770000e-89 340.0
59 TraesCS3D01G334900 chr1B 88.318 214 25 0 3582 3795 349840598 349840811 1.840000e-64 257.0
60 TraesCS3D01G334900 chr1B 91.111 180 16 0 3792 3971 349840966 349841145 1.430000e-60 244.0
61 TraesCS3D01G334900 chrUn 87.427 342 35 5 4779 5119 351521590 351521256 2.250000e-103 387.0
62 TraesCS3D01G334900 chrUn 78.912 147 24 5 2714 2858 88060783 88060642 5.490000e-15 93.5
63 TraesCS3D01G334900 chrUn 81.609 87 7 8 4574 4655 96737096 96737014 4.300000e-06 63.9
64 TraesCS3D01G334900 chr5B 87.135 342 37 5 4779 5119 32029335 32029000 1.050000e-101 381.0
65 TraesCS3D01G334900 chr5A 83.733 375 38 17 4763 5120 707706545 707706913 2.970000e-87 333.0
66 TraesCS3D01G334900 chr5A 78.065 465 49 20 4687 5120 702476573 702476131 1.430000e-60 244.0
67 TraesCS3D01G334900 chr7B 80.469 256 37 6 1132 1377 418192848 418192596 3.170000e-42 183.0
68 TraesCS3D01G334900 chr7B 76.812 138 27 4 2726 2858 72052309 72052446 7.150000e-09 73.1
69 TraesCS3D01G334900 chr7B 91.837 49 3 1 1430 1477 124342558 124342510 3.330000e-07 67.6
70 TraesCS3D01G334900 chr5D 85.437 103 13 2 1376 1477 269021949 269021848 7.050000e-19 106.0
71 TraesCS3D01G334900 chr5D 82.759 87 13 2 1381 1466 329647173 329647088 5.530000e-10 76.8
72 TraesCS3D01G334900 chr2B 79.592 147 23 4 2716 2856 122648955 122648810 1.180000e-16 99.0
73 TraesCS3D01G334900 chr2B 83.810 105 15 2 1374 1477 748490240 748490343 1.180000e-16 99.0
74 TraesCS3D01G334900 chr7D 77.273 154 29 6 2720 2868 575899167 575899015 9.180000e-13 86.1
75 TraesCS3D01G334900 chr7D 80.952 105 14 5 2745 2844 488555387 488555284 1.540000e-10 78.7
76 TraesCS3D01G334900 chr7D 88.235 51 6 0 5061 5111 45223749 45223699 1.550000e-05 62.1
77 TraesCS3D01G334900 chr6D 95.122 41 2 0 1381 1421 470666431 470666391 1.200000e-06 65.8
78 TraesCS3D01G334900 chr6A 78.641 103 10 3 1380 1481 126353245 126353336 2.000000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G334900 chr3D 446909050 446914196 5146 False 9505.000000 9505 100.000000 1 5147 1 chr3D.!!$F1 5146
1 TraesCS3D01G334900 chr3D 550271186 550271868 682 False 730.000000 730 86.167000 17 700 1 chr3D.!!$F2 683
2 TraesCS3D01G334900 chr3D 446854218 446856241 2023 False 594.000000 665 90.580000 1032 4029 4 chr3D.!!$F4 2997
3 TraesCS3D01G334900 chr3B 586420908 586427686 6778 False 1969.666667 2150 90.130333 17 4663 3 chr3B.!!$F2 4646
4 TraesCS3D01G334900 chr3B 586340954 586342980 2026 False 572.250000 649 90.344500 1032 4029 4 chr3B.!!$F1 2997
5 TraesCS3D01G334900 chr3A 588724222 588729189 4967 False 781.333333 1568 89.260000 738 4683 6 chr3A.!!$F6 3945
6 TraesCS3D01G334900 chr3A 277541037 277541710 673 False 675.000000 675 84.897000 17 691 1 chr3A.!!$F2 674
7 TraesCS3D01G334900 chr3A 588689748 588690792 1044 False 502.250000 911 90.775000 17 767 2 chr3A.!!$F5 750
8 TraesCS3D01G334900 chr3A 588657662 588659706 2044 False 463.600000 586 91.348400 1016 4001 5 chr3A.!!$F4 2985
9 TraesCS3D01G334900 chr2A 535834267 535834935 668 False 710.000000 710 86.095000 17 680 1 chr2A.!!$F2 663
10 TraesCS3D01G334900 chr4D 83849394 83850077 683 False 706.000000 706 85.486000 17 697 1 chr4D.!!$F1 680
11 TraesCS3D01G334900 chr2D 398645647 398646249 602 False 662.000000 662 86.743000 17 616 1 chr2D.!!$F1 599
12 TraesCS3D01G334900 chr2D 521408795 521409460 665 True 652.000000 652 84.501000 17 681 1 chr2D.!!$R4 664
13 TraesCS3D01G334900 chr2D 209118627 209119305 678 True 617.000000 617 83.309000 18 703 1 chr2D.!!$R3 685
14 TraesCS3D01G334900 chr1D 261879534 261881237 1703 True 358.000000 551 87.145250 1579 3971 4 chr1D.!!$R3 2392
15 TraesCS3D01G334900 chr1A 337981721 337987441 5720 False 324.750000 529 86.117500 1060 3971 4 chr1A.!!$F2 2911
16 TraesCS3D01G334900 chr1B 349838135 349841145 3010 False 354.200000 523 87.282600 1060 3971 5 chr1B.!!$F2 2911

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
554 577 2.161609 CCGTGGAAAGTGAAATGTAGGC 59.838 50.0 0.00 0.0 0.00 3.93 F
1337 1697 0.815734 CGGTGGTCGAGTACATCCTT 59.184 55.0 0.00 0.0 42.43 3.36 F
2140 5942 0.522180 GAGATATCGGACGGCGACAT 59.478 55.0 16.62 0.0 0.00 3.06 F
2940 6881 0.179001 ACCCGTAAAGGCAAAGCAGT 60.179 50.0 0.00 0.0 39.21 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1565 5256 0.517316 GCGCCCTTTAGTTGTGTGAG 59.483 55.000 0.00 0.0 0.00 3.51 R
2871 6805 0.113776 TCGTTGGGTGGGACTAGTCT 59.886 55.000 21.88 0.0 0.00 3.24 R
3752 10920 1.003233 GGCTCTCCGGCAAGAACTT 60.003 57.895 0.00 0.0 38.25 2.66 R
4857 12608 0.036010 ATTCCGCAACTGGACCTCTG 60.036 55.000 0.00 0.0 37.89 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.013369 GGTCATATTTCCTTCACCTATTTCACC 59.987 40.741 0.00 0.00 0.00 4.02
125 126 9.703892 TGAAACTAATTATTTGGAAATGTGTGG 57.296 29.630 0.00 0.00 0.00 4.17
126 127 9.921637 GAAACTAATTATTTGGAAATGTGTGGA 57.078 29.630 0.00 0.00 0.00 4.02
137 138 7.881643 TGGAAATGTGTGGAATTTTATTTCG 57.118 32.000 0.00 0.00 36.11 3.46
308 315 4.701171 TGTGGAACGGTTTACTTCAAAAGT 59.299 37.500 0.00 0.00 42.39 2.66
554 577 2.161609 CCGTGGAAAGTGAAATGTAGGC 59.838 50.000 0.00 0.00 0.00 3.93
736 1065 4.210120 GCATGAAATCGACTGTACCATCTC 59.790 45.833 0.00 0.00 0.00 2.75
779 1108 6.094464 TGCAGTGTATCTCATCTGAAAAATGG 59.906 38.462 0.00 0.00 31.65 3.16
803 1145 7.874016 TGGTTCACGTGTTATACACTATTCTTT 59.126 33.333 16.51 0.00 46.46 2.52
819 1161 9.459640 CACTATTCTTTAGCATTCAATGAATGG 57.540 33.333 30.09 17.04 46.49 3.16
871 1213 2.474359 CGCAATTTTCCATTTTGCACGA 59.526 40.909 7.53 0.00 44.58 4.35
872 1214 3.123284 CGCAATTTTCCATTTTGCACGAT 59.877 39.130 7.53 0.00 44.58 3.73
982 1327 2.357952 GGAATCGTTTGCCATAGTTCCC 59.642 50.000 0.00 0.00 0.00 3.97
1337 1697 0.815734 CGGTGGTCGAGTACATCCTT 59.184 55.000 0.00 0.00 42.43 3.36
1379 1744 0.928229 GCAAGGTACGCGATACAAGG 59.072 55.000 15.93 5.92 35.23 3.61
1392 1778 2.610438 TACAAGGTACTCCCTCCGTT 57.390 50.000 0.00 0.00 45.47 4.44
1393 1779 1.725803 ACAAGGTACTCCCTCCGTTT 58.274 50.000 0.00 0.00 45.47 3.60
1394 1780 1.622312 ACAAGGTACTCCCTCCGTTTC 59.378 52.381 0.00 0.00 45.47 2.78
1398 1784 2.707257 AGGTACTCCCTCCGTTTCAAAA 59.293 45.455 0.00 0.00 40.71 2.44
1399 1785 3.329814 AGGTACTCCCTCCGTTTCAAAAT 59.670 43.478 0.00 0.00 40.71 1.82
1402 1788 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
1403 1789 4.576879 ACTCCCTCCGTTTCAAAATAGAC 58.423 43.478 0.00 0.00 0.00 2.59
1407 1793 4.243270 CCTCCGTTTCAAAATAGACGACT 58.757 43.478 0.00 0.00 37.69 4.18
1408 1794 4.689345 CCTCCGTTTCAAAATAGACGACTT 59.311 41.667 0.00 0.00 37.69 3.01
1409 1795 5.865552 CCTCCGTTTCAAAATAGACGACTTA 59.134 40.000 0.00 0.00 37.69 2.24
1411 1797 7.064253 CCTCCGTTTCAAAATAGACGACTTAAT 59.936 37.037 0.00 0.00 37.69 1.40
1412 1798 8.314143 TCCGTTTCAAAATAGACGACTTAATT 57.686 30.769 0.00 0.00 37.69 1.40
1413 1799 8.776470 TCCGTTTCAAAATAGACGACTTAATTT 58.224 29.630 0.00 0.00 37.69 1.82
1414 1800 9.389570 CCGTTTCAAAATAGACGACTTAATTTT 57.610 29.630 0.00 0.00 37.69 1.82
1467 1853 9.782028 CAAAATTGAGTCATGTATTTTGAAACG 57.218 29.630 24.58 7.87 44.64 3.60
1468 1854 8.519492 AAATTGAGTCATGTATTTTGAAACGG 57.481 30.769 0.00 0.00 0.00 4.44
1469 1855 6.869315 TTGAGTCATGTATTTTGAAACGGA 57.131 33.333 0.00 0.00 0.00 4.69
1470 1856 6.480524 TGAGTCATGTATTTTGAAACGGAG 57.519 37.500 0.00 0.00 0.00 4.63
1471 1857 5.411361 TGAGTCATGTATTTTGAAACGGAGG 59.589 40.000 0.00 0.00 0.00 4.30
1472 1858 5.556915 AGTCATGTATTTTGAAACGGAGGA 58.443 37.500 0.00 0.00 0.00 3.71
1523 2834 5.244402 AGAGAGTGATCAATAGCTCAGGATG 59.756 44.000 12.64 0.00 37.54 3.51
1564 5255 3.673338 TGTGATCGATGTTTCTGAACGAC 59.327 43.478 0.54 0.00 38.65 4.34
1565 5256 3.060895 GTGATCGATGTTTCTGAACGACC 59.939 47.826 0.54 0.00 38.65 4.79
1566 5257 3.056821 TGATCGATGTTTCTGAACGACCT 60.057 43.478 0.54 0.00 38.65 3.85
1567 5258 2.942710 TCGATGTTTCTGAACGACCTC 58.057 47.619 0.00 0.00 38.65 3.85
1688 5380 1.226717 GCCAGCTACGACTTCTCCG 60.227 63.158 0.00 0.00 0.00 4.63
2137 5939 0.954449 GAGGAGATATCGGACGGCGA 60.954 60.000 16.62 0.00 0.00 5.54
2138 5940 1.209640 GGAGATATCGGACGGCGAC 59.790 63.158 16.62 7.58 0.00 5.19
2139 5941 1.512996 GGAGATATCGGACGGCGACA 61.513 60.000 16.62 0.00 0.00 4.35
2140 5942 0.522180 GAGATATCGGACGGCGACAT 59.478 55.000 16.62 0.00 0.00 3.06
2141 5943 0.959553 AGATATCGGACGGCGACATT 59.040 50.000 16.62 0.00 0.00 2.71
2142 5944 1.060713 GATATCGGACGGCGACATTG 58.939 55.000 16.62 1.03 0.00 2.82
2199 6054 2.610859 TGAGGCTCAGGTTCCCCC 60.611 66.667 14.43 0.00 0.00 5.40
2408 6273 3.648739 GGAGGTCCAGGAGAAGATAAGT 58.351 50.000 0.00 0.00 35.64 2.24
2569 6452 2.023015 TGGTGAGTCCATCCATCTACCT 60.023 50.000 0.00 0.00 41.93 3.08
2570 6453 3.041946 GGTGAGTCCATCCATCTACCTT 58.958 50.000 0.00 0.00 35.97 3.50
2596 6494 1.194772 GACGGCACACTCTAAACTTGC 59.805 52.381 0.00 0.00 0.00 4.01
2741 6671 7.489435 CAGTCTTGCTAAATCTTAATCGACTGA 59.511 37.037 0.00 0.00 44.29 3.41
2748 6678 7.489757 GCTAAATCTTAATCGACTGAGACTTGT 59.510 37.037 0.00 0.00 0.00 3.16
2755 6685 4.251543 TCGACTGAGACTTGTTTATGCA 57.748 40.909 0.00 0.00 0.00 3.96
2801 6731 9.029368 TGAGATCTTACATTGAGGTCCATATAG 57.971 37.037 0.00 0.00 0.00 1.31
2853 6787 7.175347 ACATGTTATGTCACTGTACTGAGAT 57.825 36.000 6.77 3.59 39.92 2.75
2858 6792 5.745312 ATGTCACTGTACTGAGATTTGGA 57.255 39.130 6.77 0.00 0.00 3.53
2860 6794 5.482006 TGTCACTGTACTGAGATTTGGATG 58.518 41.667 6.77 0.00 0.00 3.51
2868 6802 5.083533 ACTGAGATTTGGATGAGTCTCAC 57.916 43.478 4.21 0.00 41.40 3.51
2870 6804 5.082251 TGAGATTTGGATGAGTCTCACTG 57.918 43.478 4.21 0.00 41.40 3.66
2871 6805 4.774200 TGAGATTTGGATGAGTCTCACTGA 59.226 41.667 4.21 0.00 41.40 3.41
2872 6806 5.105432 TGAGATTTGGATGAGTCTCACTGAG 60.105 44.000 4.21 0.00 41.40 3.35
2873 6807 5.022122 AGATTTGGATGAGTCTCACTGAGA 58.978 41.667 4.21 4.50 36.22 3.27
2900 6841 1.335506 CCACCCAACGAAAAACCATCG 60.336 52.381 0.00 0.00 45.47 3.84
2902 6843 2.227865 CACCCAACGAAAAACCATCGAT 59.772 45.455 2.65 0.00 42.76 3.59
2940 6881 0.179001 ACCCGTAAAGGCAAAGCAGT 60.179 50.000 0.00 0.00 39.21 4.40
2981 9057 1.467734 GCAAGCAACTCTCACAGGATG 59.532 52.381 0.00 0.00 46.00 3.51
2984 9060 2.182827 AGCAACTCTCACAGGATGCTA 58.817 47.619 0.00 0.00 43.75 3.49
2996 10148 1.142465 AGGATGCTAAGCAGACCATGG 59.858 52.381 11.19 11.19 43.65 3.66
3081 10234 1.187567 AACAAAGGGGTGCAGGCATC 61.188 55.000 0.00 0.00 0.00 3.91
3169 10322 7.219322 TGATGCATTAGAAGCAGAGCTATTAA 58.781 34.615 0.00 0.00 46.36 1.40
3206 10359 4.439305 TTTCATTAGCACTGCAATGGAC 57.561 40.909 18.27 0.00 32.37 4.02
3217 10372 2.936498 CTGCAATGGACTTACTTACCCG 59.064 50.000 0.00 0.00 0.00 5.28
3231 10386 2.589798 TACCCGTTGATGTCGAATCC 57.410 50.000 0.00 0.00 0.00 3.01
3254 10409 1.022735 TGTTCGGAGGCTATCTCGAC 58.977 55.000 0.00 0.00 43.34 4.20
3297 10454 6.183360 GCAACAAATAAAAGCATGCGTTCATA 60.183 34.615 19.22 9.52 0.00 2.15
3356 10513 5.952526 TCTTGTATTAGTCACACTCGTCA 57.047 39.130 0.00 0.00 0.00 4.35
3378 10535 8.604035 CGTCAAAACTGTAATAATGCTAGTCAT 58.396 33.333 0.00 0.00 36.87 3.06
3385 10542 9.935241 ACTGTAATAATGCTAGTCATTCTATGG 57.065 33.333 13.42 6.48 43.90 2.74
3395 10552 6.203723 GCTAGTCATTCTATGGCTACTTTTGG 59.796 42.308 0.00 0.00 44.78 3.28
3403 10560 6.775708 TCTATGGCTACTTTTGGTAGTTTGT 58.224 36.000 4.99 0.00 46.99 2.83
3404 10561 7.909518 TCTATGGCTACTTTTGGTAGTTTGTA 58.090 34.615 4.99 0.00 46.99 2.41
3435 10592 0.480690 TGGTTTGGCTAGGCTTTGGA 59.519 50.000 18.18 0.00 0.00 3.53
3436 10593 1.077005 TGGTTTGGCTAGGCTTTGGAT 59.923 47.619 18.18 0.00 0.00 3.41
3447 10604 2.646798 AGGCTTTGGATCAGAAGAGGTT 59.353 45.455 10.49 0.00 0.00 3.50
3480 10637 9.798994 ATTATTGGACGAGATTATAATACCGAC 57.201 33.333 19.52 14.92 0.00 4.79
3497 10654 5.334724 ACCGACCGAACTTTGAGTAATAT 57.665 39.130 0.00 0.00 0.00 1.28
3510 10667 9.793259 ACTTTGAGTAATATGAGAACTTTTCCA 57.207 29.630 0.00 0.00 0.00 3.53
3521 10678 8.614469 ATGAGAACTTTTCCACAAAACAAAAA 57.386 26.923 0.00 0.00 0.00 1.94
3547 10704 5.511202 CCAGGCTAAAACCATCACAATTTGT 60.511 40.000 0.00 0.00 0.00 2.83
3562 10719 3.806625 ATTTGTTGAGCTGCACAACTT 57.193 38.095 32.18 19.73 45.08 2.66
3617 10784 0.599204 GGAGTGCTTTTCCGACGACA 60.599 55.000 0.00 0.00 0.00 4.35
3658 10825 0.681887 TCGGCAAGGGAGACATCGTA 60.682 55.000 0.00 0.00 0.00 3.43
3758 10926 4.664677 ACGAGCGCGGCAAGTTCT 62.665 61.111 15.86 0.00 43.17 3.01
3860 11519 3.296709 AAGATCTTCGCGGCCGTGT 62.297 57.895 35.52 18.93 35.54 4.49
3887 11546 1.548973 CTTCTTCGTGCTCGCGTTGT 61.549 55.000 5.77 0.00 36.96 3.32
3900 11559 1.225855 GCGTTGTGTGACAAGGATGA 58.774 50.000 12.13 0.00 44.19 2.92
3901 11560 1.601903 GCGTTGTGTGACAAGGATGAA 59.398 47.619 12.13 0.00 44.19 2.57
4090 11755 1.760613 CTTAGCCCGGACATGGAAGTA 59.239 52.381 0.73 0.00 0.00 2.24
4119 11784 6.745450 CCGTGTGAACATATATTTTGTGAACC 59.255 38.462 0.00 0.00 0.00 3.62
4328 12049 9.719279 ACAAAATTGTGCATGACATTTAAAAAG 57.281 25.926 0.00 0.00 40.49 2.27
4329 12050 9.719279 CAAAATTGTGCATGACATTTAAAAAGT 57.281 25.926 0.00 0.00 33.40 2.66
4457 12206 8.893219 TGCATGTTTTACCAAAAATGTTGATA 57.107 26.923 0.00 0.00 36.96 2.15
4530 12280 8.770438 AAAAGAAAACTCAGTGTGCATTTTAA 57.230 26.923 0.00 0.00 0.00 1.52
4562 12312 9.605955 TTGAACATTTAATCGGATATATTTGCG 57.394 29.630 0.71 0.71 0.00 4.85
4623 12374 5.772825 ATGTCACTGCTACACAAAAATGT 57.227 34.783 0.00 0.00 36.56 2.71
4684 12435 9.825109 TTTTTAAATAAAGTCACCCAAAGAAGG 57.175 29.630 0.00 0.00 0.00 3.46
4685 12436 5.468540 AAATAAAGTCACCCAAAGAAGGC 57.531 39.130 0.00 0.00 0.00 4.35
4686 12437 1.318576 AAAGTCACCCAAAGAAGGCG 58.681 50.000 0.00 0.00 0.00 5.52
4687 12438 0.537371 AAGTCACCCAAAGAAGGCGG 60.537 55.000 0.00 0.00 0.00 6.13
4688 12439 1.072505 GTCACCCAAAGAAGGCGGA 59.927 57.895 0.00 0.00 0.00 5.54
4689 12440 0.322546 GTCACCCAAAGAAGGCGGAT 60.323 55.000 0.00 0.00 0.00 4.18
4690 12441 0.404040 TCACCCAAAGAAGGCGGATT 59.596 50.000 0.00 0.00 0.00 3.01
4691 12442 1.203001 TCACCCAAAGAAGGCGGATTT 60.203 47.619 0.00 0.00 0.00 2.17
4692 12443 1.618343 CACCCAAAGAAGGCGGATTTT 59.382 47.619 0.00 0.00 0.00 1.82
4693 12444 2.037121 CACCCAAAGAAGGCGGATTTTT 59.963 45.455 0.00 0.00 0.00 1.94
4713 12464 3.595709 TTTAAAATATTCGCCGGCTCG 57.404 42.857 26.68 10.37 0.00 5.03
4714 12465 2.512485 TAAAATATTCGCCGGCTCGA 57.488 45.000 26.68 13.00 36.60 4.04
4715 12466 0.935196 AAAATATTCGCCGGCTCGAC 59.065 50.000 26.68 0.00 38.30 4.20
4716 12467 0.179094 AAATATTCGCCGGCTCGACA 60.179 50.000 26.68 5.93 38.30 4.35
4717 12468 0.597637 AATATTCGCCGGCTCGACAG 60.598 55.000 26.68 7.77 38.30 3.51
4718 12469 3.768185 TATTCGCCGGCTCGACAGC 62.768 63.158 26.68 0.00 46.06 4.40
4727 12478 2.874709 GCTCGACAGCCGTTAGATC 58.125 57.895 0.00 0.00 40.14 2.75
4728 12479 0.382515 GCTCGACAGCCGTTAGATCT 59.617 55.000 0.00 0.00 40.14 2.75
4729 12480 1.602851 GCTCGACAGCCGTTAGATCTA 59.397 52.381 0.00 0.00 40.14 1.98
4730 12481 2.350007 GCTCGACAGCCGTTAGATCTAG 60.350 54.545 2.02 0.00 40.14 2.43
4731 12482 2.873472 CTCGACAGCCGTTAGATCTAGT 59.127 50.000 2.02 0.00 39.75 2.57
4732 12483 2.612672 TCGACAGCCGTTAGATCTAGTG 59.387 50.000 2.02 0.00 39.75 2.74
4733 12484 2.355132 CGACAGCCGTTAGATCTAGTGT 59.645 50.000 2.02 3.50 0.00 3.55
4734 12485 3.696898 GACAGCCGTTAGATCTAGTGTG 58.303 50.000 2.02 1.16 0.00 3.82
4735 12486 3.353557 ACAGCCGTTAGATCTAGTGTGA 58.646 45.455 2.02 0.00 0.00 3.58
4736 12487 3.762288 ACAGCCGTTAGATCTAGTGTGAA 59.238 43.478 2.02 0.00 0.00 3.18
4737 12488 4.106197 CAGCCGTTAGATCTAGTGTGAAC 58.894 47.826 2.02 0.00 0.00 3.18
4738 12489 3.130693 AGCCGTTAGATCTAGTGTGAACC 59.869 47.826 2.02 0.00 0.00 3.62
4739 12490 3.130693 GCCGTTAGATCTAGTGTGAACCT 59.869 47.826 2.02 0.00 0.00 3.50
4740 12491 4.337555 GCCGTTAGATCTAGTGTGAACCTA 59.662 45.833 2.02 0.00 0.00 3.08
4741 12492 5.009811 GCCGTTAGATCTAGTGTGAACCTAT 59.990 44.000 2.02 0.00 0.00 2.57
4742 12493 6.439599 CCGTTAGATCTAGTGTGAACCTATG 58.560 44.000 2.02 0.00 0.00 2.23
4743 12494 6.262496 CCGTTAGATCTAGTGTGAACCTATGA 59.738 42.308 2.02 0.00 0.00 2.15
4744 12495 7.133513 CGTTAGATCTAGTGTGAACCTATGAC 58.866 42.308 2.02 0.00 0.00 3.06
4745 12496 7.427214 GTTAGATCTAGTGTGAACCTATGACC 58.573 42.308 2.02 0.00 0.00 4.02
4746 12497 4.896482 AGATCTAGTGTGAACCTATGACCC 59.104 45.833 0.00 0.00 0.00 4.46
4747 12498 4.055710 TCTAGTGTGAACCTATGACCCA 57.944 45.455 0.00 0.00 0.00 4.51
4748 12499 4.023980 TCTAGTGTGAACCTATGACCCAG 58.976 47.826 0.00 0.00 0.00 4.45
4749 12500 2.902608 AGTGTGAACCTATGACCCAGA 58.097 47.619 0.00 0.00 0.00 3.86
4750 12501 2.567615 AGTGTGAACCTATGACCCAGAC 59.432 50.000 0.00 0.00 0.00 3.51
4751 12502 1.548719 TGTGAACCTATGACCCAGACG 59.451 52.381 0.00 0.00 0.00 4.18
4752 12503 0.535335 TGAACCTATGACCCAGACGC 59.465 55.000 0.00 0.00 0.00 5.19
4753 12504 0.527817 GAACCTATGACCCAGACGCG 60.528 60.000 3.53 3.53 0.00 6.01
4754 12505 1.255667 AACCTATGACCCAGACGCGT 61.256 55.000 13.85 13.85 0.00 6.01
4755 12506 1.255667 ACCTATGACCCAGACGCGTT 61.256 55.000 15.53 0.00 0.00 4.84
4756 12507 0.527817 CCTATGACCCAGACGCGTTC 60.528 60.000 15.53 7.14 0.00 3.95
4757 12508 0.456221 CTATGACCCAGACGCGTTCT 59.544 55.000 15.53 9.46 33.33 3.01
4758 12509 0.892755 TATGACCCAGACGCGTTCTT 59.107 50.000 15.53 7.37 28.96 2.52
4759 12510 0.892755 ATGACCCAGACGCGTTCTTA 59.107 50.000 15.53 0.00 28.96 2.10
4760 12511 0.038892 TGACCCAGACGCGTTCTTAC 60.039 55.000 15.53 0.00 28.96 2.34
4761 12512 0.038892 GACCCAGACGCGTTCTTACA 60.039 55.000 15.53 0.00 28.96 2.41
4762 12513 0.390124 ACCCAGACGCGTTCTTACAA 59.610 50.000 15.53 0.00 28.96 2.41
4763 12514 1.001633 ACCCAGACGCGTTCTTACAAT 59.998 47.619 15.53 0.00 28.96 2.71
4764 12515 2.073816 CCCAGACGCGTTCTTACAATT 58.926 47.619 15.53 0.00 28.96 2.32
4765 12516 2.159707 CCCAGACGCGTTCTTACAATTG 60.160 50.000 15.53 3.24 28.96 2.32
4766 12517 2.495939 CAGACGCGTTCTTACAATTGC 58.504 47.619 15.53 0.00 28.96 3.56
4767 12518 2.096466 CAGACGCGTTCTTACAATTGCA 60.096 45.455 15.53 0.00 28.96 4.08
4768 12519 2.546368 AGACGCGTTCTTACAATTGCAA 59.454 40.909 15.53 0.00 0.00 4.08
4769 12520 2.646250 ACGCGTTCTTACAATTGCAAC 58.354 42.857 5.58 3.02 0.00 4.17
4770 12521 2.032302 ACGCGTTCTTACAATTGCAACA 59.968 40.909 5.58 0.00 0.00 3.33
4771 12522 3.039405 CGCGTTCTTACAATTGCAACAA 58.961 40.909 0.00 0.00 0.00 2.83
4772 12523 3.121828 CGCGTTCTTACAATTGCAACAAC 60.122 43.478 0.00 2.46 0.00 3.32
4773 12524 3.121828 GCGTTCTTACAATTGCAACAACG 60.122 43.478 20.87 20.87 38.66 4.10
4774 12525 4.275662 CGTTCTTACAATTGCAACAACGA 58.724 39.130 20.69 1.08 38.05 3.85
4775 12526 4.909305 CGTTCTTACAATTGCAACAACGAT 59.091 37.500 20.69 0.00 38.05 3.73
4776 12527 5.164292 CGTTCTTACAATTGCAACAACGATG 60.164 40.000 20.69 0.00 38.05 3.84
4777 12528 4.793071 TCTTACAATTGCAACAACGATGG 58.207 39.130 0.00 0.00 0.00 3.51
4778 12529 4.277174 TCTTACAATTGCAACAACGATGGT 59.723 37.500 0.00 0.00 0.00 3.55
4780 12531 2.100584 ACAATTGCAACAACGATGGTGT 59.899 40.909 12.62 0.00 46.40 4.16
4781 12532 3.122297 CAATTGCAACAACGATGGTGTT 58.878 40.909 12.62 2.99 46.40 3.32
4786 12537 3.649096 CAACGATGGTGTTGCGGA 58.351 55.556 0.00 0.00 42.34 5.54
4787 12538 1.945522 CAACGATGGTGTTGCGGAA 59.054 52.632 0.00 0.00 42.34 4.30
4788 12539 0.309302 CAACGATGGTGTTGCGGAAA 59.691 50.000 0.00 0.00 42.34 3.13
4789 12540 0.309612 AACGATGGTGTTGCGGAAAC 59.690 50.000 0.00 0.00 39.41 2.78
4790 12541 0.534203 ACGATGGTGTTGCGGAAACT 60.534 50.000 0.00 0.00 39.70 2.66
4791 12542 0.591170 CGATGGTGTTGCGGAAACTT 59.409 50.000 0.00 0.00 39.70 2.66
4792 12543 1.001815 CGATGGTGTTGCGGAAACTTT 60.002 47.619 0.00 0.00 39.70 2.66
4793 12544 2.661594 GATGGTGTTGCGGAAACTTTC 58.338 47.619 0.00 0.00 39.70 2.62
4794 12545 0.378962 TGGTGTTGCGGAAACTTTCG 59.621 50.000 0.00 0.00 39.70 3.46
4802 12553 2.969443 CGGAAACTTTCGCAACAGAT 57.031 45.000 0.00 0.00 0.00 2.90
4803 12554 2.574322 CGGAAACTTTCGCAACAGATG 58.426 47.619 0.00 0.00 0.00 2.90
4804 12555 2.032030 CGGAAACTTTCGCAACAGATGT 60.032 45.455 0.00 0.00 0.00 3.06
4805 12556 3.555518 GGAAACTTTCGCAACAGATGTC 58.444 45.455 0.00 0.00 0.00 3.06
4806 12557 3.003275 GGAAACTTTCGCAACAGATGTCA 59.997 43.478 0.00 0.00 0.00 3.58
4807 12558 4.320494 GGAAACTTTCGCAACAGATGTCAT 60.320 41.667 0.00 0.00 0.00 3.06
4808 12559 3.818961 ACTTTCGCAACAGATGTCATG 57.181 42.857 0.00 0.00 0.00 3.07
4809 12560 3.141398 ACTTTCGCAACAGATGTCATGT 58.859 40.909 0.00 0.00 0.00 3.21
4810 12561 3.565482 ACTTTCGCAACAGATGTCATGTT 59.435 39.130 0.00 0.00 41.47 2.71
4811 12562 4.754618 ACTTTCGCAACAGATGTCATGTTA 59.245 37.500 0.00 0.00 38.80 2.41
4812 12563 4.661993 TTCGCAACAGATGTCATGTTAC 57.338 40.909 0.00 0.00 38.80 2.50
4813 12564 2.666022 TCGCAACAGATGTCATGTTACG 59.334 45.455 5.83 5.83 44.77 3.18
4814 12565 2.222796 CGCAACAGATGTCATGTTACGG 60.223 50.000 4.64 0.00 41.49 4.02
4815 12566 3.000041 GCAACAGATGTCATGTTACGGA 59.000 45.455 0.00 0.00 38.80 4.69
4816 12567 3.435327 GCAACAGATGTCATGTTACGGAA 59.565 43.478 0.00 0.00 38.80 4.30
4817 12568 4.083537 GCAACAGATGTCATGTTACGGAAA 60.084 41.667 0.00 0.00 38.80 3.13
4818 12569 5.382303 CAACAGATGTCATGTTACGGAAAC 58.618 41.667 0.00 0.00 38.80 2.78
4819 12570 4.894784 ACAGATGTCATGTTACGGAAACT 58.105 39.130 0.00 0.00 38.99 2.66
4820 12571 5.305585 ACAGATGTCATGTTACGGAAACTT 58.694 37.500 0.00 0.00 38.99 2.66
4821 12572 5.763204 ACAGATGTCATGTTACGGAAACTTT 59.237 36.000 0.00 0.00 38.99 2.66
4822 12573 6.262273 ACAGATGTCATGTTACGGAAACTTTT 59.738 34.615 0.00 0.00 38.99 2.27
4823 12574 6.578545 CAGATGTCATGTTACGGAAACTTTTG 59.421 38.462 0.00 1.46 38.99 2.44
4824 12575 4.602995 TGTCATGTTACGGAAACTTTTGC 58.397 39.130 0.00 0.00 38.99 3.68
4825 12576 4.096532 TGTCATGTTACGGAAACTTTTGCA 59.903 37.500 0.00 0.00 38.99 4.08
4826 12577 5.038033 GTCATGTTACGGAAACTTTTGCAA 58.962 37.500 0.00 0.00 38.99 4.08
4827 12578 5.038033 TCATGTTACGGAAACTTTTGCAAC 58.962 37.500 0.00 0.00 38.99 4.17
4828 12579 4.436242 TGTTACGGAAACTTTTGCAACA 57.564 36.364 0.00 0.00 38.99 3.33
4829 12580 4.416620 TGTTACGGAAACTTTTGCAACAG 58.583 39.130 11.05 11.05 38.99 3.16
4830 12581 4.156190 TGTTACGGAAACTTTTGCAACAGA 59.844 37.500 19.17 0.00 38.99 3.41
4831 12582 3.859411 ACGGAAACTTTTGCAACAGAA 57.141 38.095 19.17 0.52 0.00 3.02
4832 12583 3.769536 ACGGAAACTTTTGCAACAGAAG 58.230 40.909 19.17 13.05 32.78 2.85
4833 12584 3.192633 ACGGAAACTTTTGCAACAGAAGT 59.807 39.130 19.17 13.69 39.85 3.01
4834 12585 3.791353 CGGAAACTTTTGCAACAGAAGTC 59.209 43.478 19.17 11.66 37.73 3.01
4835 12586 4.112634 GGAAACTTTTGCAACAGAAGTCC 58.887 43.478 19.17 16.03 37.73 3.85
4836 12587 4.142160 GGAAACTTTTGCAACAGAAGTCCT 60.142 41.667 19.17 7.92 37.73 3.85
4853 12604 9.398170 CAGAAGTCCTGTTACATAATGTTTTTG 57.602 33.333 0.00 0.00 38.10 2.44
4854 12605 8.082242 AGAAGTCCTGTTACATAATGTTTTTGC 58.918 33.333 0.00 0.00 0.00 3.68
4855 12606 7.283625 AGTCCTGTTACATAATGTTTTTGCA 57.716 32.000 0.00 0.00 0.00 4.08
4856 12607 7.721402 AGTCCTGTTACATAATGTTTTTGCAA 58.279 30.769 0.00 0.00 0.00 4.08
4857 12608 7.651704 AGTCCTGTTACATAATGTTTTTGCAAC 59.348 33.333 0.00 0.00 0.00 4.17
4858 12609 7.436673 GTCCTGTTACATAATGTTTTTGCAACA 59.563 33.333 0.00 0.00 34.31 3.33
4859 12610 7.651304 TCCTGTTACATAATGTTTTTGCAACAG 59.349 33.333 0.00 12.82 39.83 3.16
4860 12611 7.651304 CCTGTTACATAATGTTTTTGCAACAGA 59.349 33.333 17.79 0.00 41.66 3.41
4861 12612 8.572828 TGTTACATAATGTTTTTGCAACAGAG 57.427 30.769 0.00 0.00 33.18 3.35
4862 12613 7.651304 TGTTACATAATGTTTTTGCAACAGAGG 59.349 33.333 0.00 0.00 33.18 3.69
4863 12614 6.160576 ACATAATGTTTTTGCAACAGAGGT 57.839 33.333 0.00 0.00 33.18 3.85
4864 12615 6.215845 ACATAATGTTTTTGCAACAGAGGTC 58.784 36.000 0.00 0.00 33.18 3.85
4865 12616 3.733443 ATGTTTTTGCAACAGAGGTCC 57.267 42.857 0.00 0.00 33.18 4.46
4866 12617 2.451490 TGTTTTTGCAACAGAGGTCCA 58.549 42.857 0.00 0.00 0.00 4.02
4867 12618 2.426738 TGTTTTTGCAACAGAGGTCCAG 59.573 45.455 0.00 0.00 0.00 3.86
4868 12619 2.427095 GTTTTTGCAACAGAGGTCCAGT 59.573 45.455 0.00 0.00 0.00 4.00
4869 12620 2.435372 TTTGCAACAGAGGTCCAGTT 57.565 45.000 0.00 0.00 0.00 3.16
4870 12621 1.679139 TTGCAACAGAGGTCCAGTTG 58.321 50.000 14.21 14.21 44.01 3.16
4872 12623 2.238353 CAACAGAGGTCCAGTTGCG 58.762 57.895 8.37 0.00 36.59 4.85
4873 12624 1.071471 AACAGAGGTCCAGTTGCGG 59.929 57.895 0.00 0.00 0.00 5.69
4874 12625 1.407656 AACAGAGGTCCAGTTGCGGA 61.408 55.000 0.00 0.00 0.00 5.54
4875 12626 1.371183 CAGAGGTCCAGTTGCGGAA 59.629 57.895 0.00 0.00 36.62 4.30
4876 12627 0.036010 CAGAGGTCCAGTTGCGGAAT 60.036 55.000 0.00 0.00 36.62 3.01
4877 12628 0.693049 AGAGGTCCAGTTGCGGAATT 59.307 50.000 0.00 0.00 36.62 2.17
4878 12629 1.073923 AGAGGTCCAGTTGCGGAATTT 59.926 47.619 0.00 0.00 36.62 1.82
4879 12630 1.886542 GAGGTCCAGTTGCGGAATTTT 59.113 47.619 0.00 0.00 36.62 1.82
4880 12631 2.296190 GAGGTCCAGTTGCGGAATTTTT 59.704 45.455 0.00 0.00 36.62 1.94
4938 12689 6.910536 CAACATAGATCCTGTTGTAGAACC 57.089 41.667 21.96 0.00 45.31 3.62
4939 12690 6.644347 CAACATAGATCCTGTTGTAGAACCT 58.356 40.000 21.96 0.00 45.31 3.50
4940 12691 6.472686 ACATAGATCCTGTTGTAGAACCTC 57.527 41.667 0.00 0.00 0.00 3.85
4941 12692 5.067936 ACATAGATCCTGTTGTAGAACCTCG 59.932 44.000 0.00 0.00 0.00 4.63
4942 12693 3.432378 AGATCCTGTTGTAGAACCTCGT 58.568 45.455 0.00 0.00 0.00 4.18
4943 12694 3.833070 AGATCCTGTTGTAGAACCTCGTT 59.167 43.478 0.00 0.00 0.00 3.85
4944 12695 3.380479 TCCTGTTGTAGAACCTCGTTG 57.620 47.619 0.00 0.00 0.00 4.10
4945 12696 1.798813 CCTGTTGTAGAACCTCGTTGC 59.201 52.381 0.00 0.00 0.00 4.17
4946 12697 2.479837 CTGTTGTAGAACCTCGTTGCA 58.520 47.619 0.00 0.00 0.00 4.08
4947 12698 2.869801 CTGTTGTAGAACCTCGTTGCAA 59.130 45.455 0.00 0.00 0.00 4.08
4948 12699 2.610374 TGTTGTAGAACCTCGTTGCAAC 59.390 45.455 19.89 19.89 33.84 4.17
4949 12700 2.605837 TGTAGAACCTCGTTGCAACA 57.394 45.000 28.01 14.60 0.00 3.33
4950 12701 2.206750 TGTAGAACCTCGTTGCAACAC 58.793 47.619 28.01 16.25 0.00 3.32
4951 12702 2.206750 GTAGAACCTCGTTGCAACACA 58.793 47.619 28.01 13.54 0.00 3.72
4952 12703 1.745232 AGAACCTCGTTGCAACACAA 58.255 45.000 28.01 12.49 35.33 3.33
4953 12704 2.088423 AGAACCTCGTTGCAACACAAA 58.912 42.857 28.01 10.09 40.82 2.83
4954 12705 2.097466 AGAACCTCGTTGCAACACAAAG 59.903 45.455 28.01 17.90 40.82 2.77
4955 12706 1.459450 ACCTCGTTGCAACACAAAGT 58.541 45.000 28.01 14.65 40.82 2.66
4956 12707 1.132262 ACCTCGTTGCAACACAAAGTG 59.868 47.619 28.01 10.84 40.82 3.16
4968 12719 3.372869 CACAAAGTGTGTTGCAAAAGC 57.627 42.857 0.00 0.00 43.08 3.51
4969 12720 2.735663 CACAAAGTGTGTTGCAAAAGCA 59.264 40.909 0.00 0.00 43.08 3.91
4970 12721 2.736192 ACAAAGTGTGTTGCAAAAGCAC 59.264 40.909 16.66 16.66 37.01 4.40
4971 12722 2.008752 AAGTGTGTTGCAAAAGCACC 57.991 45.000 19.21 10.46 34.56 5.01
4972 12723 1.185315 AGTGTGTTGCAAAAGCACCT 58.815 45.000 19.21 12.00 34.56 4.00
4973 12724 1.134946 AGTGTGTTGCAAAAGCACCTC 59.865 47.619 19.21 11.63 34.56 3.85
4974 12725 0.100325 TGTGTTGCAAAAGCACCTCG 59.900 50.000 14.11 0.00 32.62 4.63
4975 12726 0.594796 GTGTTGCAAAAGCACCTCGG 60.595 55.000 0.00 0.00 0.00 4.63
4976 12727 1.007387 GTTGCAAAAGCACCTCGGG 60.007 57.895 0.00 0.00 0.00 5.14
4977 12728 2.199652 TTGCAAAAGCACCTCGGGG 61.200 57.895 0.00 0.00 38.88 5.73
5000 12751 4.797471 TGATAATTCACTGCAGCAAACAC 58.203 39.130 15.27 0.00 0.00 3.32
5001 12752 4.277921 TGATAATTCACTGCAGCAAACACA 59.722 37.500 15.27 2.38 0.00 3.72
5002 12753 2.497107 ATTCACTGCAGCAAACACAC 57.503 45.000 15.27 0.00 0.00 3.82
5003 12754 1.172175 TTCACTGCAGCAAACACACA 58.828 45.000 15.27 0.00 0.00 3.72
5004 12755 1.172175 TCACTGCAGCAAACACACAA 58.828 45.000 15.27 0.00 0.00 3.33
5005 12756 1.135431 TCACTGCAGCAAACACACAAC 60.135 47.619 15.27 0.00 0.00 3.32
5006 12757 0.179166 ACTGCAGCAAACACACAACG 60.179 50.000 15.27 0.00 0.00 4.10
5007 12758 0.866906 CTGCAGCAAACACACAACGG 60.867 55.000 0.00 0.00 0.00 4.44
5008 12759 1.138671 GCAGCAAACACACAACGGT 59.861 52.632 0.00 0.00 0.00 4.83
5009 12760 0.457681 GCAGCAAACACACAACGGTT 60.458 50.000 0.00 0.00 0.00 4.44
5010 12761 1.544686 CAGCAAACACACAACGGTTC 58.455 50.000 0.00 0.00 0.00 3.62
5011 12762 1.132262 CAGCAAACACACAACGGTTCT 59.868 47.619 0.00 0.00 0.00 3.01
5012 12763 1.132262 AGCAAACACACAACGGTTCTG 59.868 47.619 0.00 0.00 0.00 3.02
5013 12764 1.131504 GCAAACACACAACGGTTCTGA 59.868 47.619 3.06 0.00 0.00 3.27
5014 12765 2.791158 GCAAACACACAACGGTTCTGAG 60.791 50.000 3.06 0.00 0.00 3.35
5015 12766 1.014352 AACACACAACGGTTCTGAGC 58.986 50.000 3.06 0.00 0.00 4.26
5016 12767 0.814010 ACACACAACGGTTCTGAGCC 60.814 55.000 3.06 0.00 0.00 4.70
5017 12768 0.813610 CACACAACGGTTCTGAGCCA 60.814 55.000 11.24 0.00 0.00 4.75
5018 12769 0.107410 ACACAACGGTTCTGAGCCAA 60.107 50.000 11.24 0.00 0.00 4.52
5019 12770 0.588252 CACAACGGTTCTGAGCCAAG 59.412 55.000 11.24 2.31 0.00 3.61
5020 12771 0.535102 ACAACGGTTCTGAGCCAAGG 60.535 55.000 11.24 1.60 0.00 3.61
5021 12772 0.250295 CAACGGTTCTGAGCCAAGGA 60.250 55.000 11.24 0.00 0.00 3.36
5022 12773 0.035458 AACGGTTCTGAGCCAAGGAG 59.965 55.000 11.24 0.00 0.00 3.69
5023 12774 0.832135 ACGGTTCTGAGCCAAGGAGA 60.832 55.000 11.24 0.00 0.00 3.71
5024 12775 0.321671 CGGTTCTGAGCCAAGGAGAA 59.678 55.000 11.24 0.00 0.00 2.87
5025 12776 1.674221 CGGTTCTGAGCCAAGGAGAAG 60.674 57.143 11.24 0.00 0.00 2.85
5026 12777 1.625818 GGTTCTGAGCCAAGGAGAAGA 59.374 52.381 5.59 0.00 0.00 2.87
5027 12778 2.238395 GGTTCTGAGCCAAGGAGAAGAT 59.762 50.000 5.59 0.00 0.00 2.40
5028 12779 3.452627 GGTTCTGAGCCAAGGAGAAGATA 59.547 47.826 5.59 0.00 0.00 1.98
5029 12780 4.080863 GGTTCTGAGCCAAGGAGAAGATAA 60.081 45.833 5.59 0.00 0.00 1.75
5030 12781 5.115480 GTTCTGAGCCAAGGAGAAGATAAG 58.885 45.833 0.00 0.00 0.00 1.73
5031 12782 4.614475 TCTGAGCCAAGGAGAAGATAAGA 58.386 43.478 0.00 0.00 0.00 2.10
5032 12783 4.404073 TCTGAGCCAAGGAGAAGATAAGAC 59.596 45.833 0.00 0.00 0.00 3.01
5033 12784 4.357325 TGAGCCAAGGAGAAGATAAGACT 58.643 43.478 0.00 0.00 0.00 3.24
5034 12785 5.519808 TGAGCCAAGGAGAAGATAAGACTA 58.480 41.667 0.00 0.00 0.00 2.59
5035 12786 5.958380 TGAGCCAAGGAGAAGATAAGACTAA 59.042 40.000 0.00 0.00 0.00 2.24
5036 12787 6.097554 TGAGCCAAGGAGAAGATAAGACTAAG 59.902 42.308 0.00 0.00 0.00 2.18
5037 12788 5.961421 AGCCAAGGAGAAGATAAGACTAAGT 59.039 40.000 0.00 0.00 0.00 2.24
5038 12789 6.045955 GCCAAGGAGAAGATAAGACTAAGTG 58.954 44.000 0.00 0.00 0.00 3.16
5039 12790 6.578023 CCAAGGAGAAGATAAGACTAAGTGG 58.422 44.000 0.00 0.00 0.00 4.00
5040 12791 6.407525 CCAAGGAGAAGATAAGACTAAGTGGG 60.408 46.154 0.00 0.00 0.00 4.61
5041 12792 4.651962 AGGAGAAGATAAGACTAAGTGGGC 59.348 45.833 0.00 0.00 0.00 5.36
5042 12793 4.406003 GGAGAAGATAAGACTAAGTGGGCA 59.594 45.833 0.00 0.00 0.00 5.36
5043 12794 5.071115 GGAGAAGATAAGACTAAGTGGGCAT 59.929 44.000 0.00 0.00 0.00 4.40
5044 12795 5.923204 AGAAGATAAGACTAAGTGGGCATG 58.077 41.667 0.00 0.00 0.00 4.06
5045 12796 5.663106 AGAAGATAAGACTAAGTGGGCATGA 59.337 40.000 0.00 0.00 0.00 3.07
5046 12797 5.957771 AGATAAGACTAAGTGGGCATGAA 57.042 39.130 0.00 0.00 0.00 2.57
5047 12798 5.923204 AGATAAGACTAAGTGGGCATGAAG 58.077 41.667 0.00 0.00 0.00 3.02
5048 12799 5.663106 AGATAAGACTAAGTGGGCATGAAGA 59.337 40.000 0.00 0.00 0.00 2.87
5049 12800 4.640771 AAGACTAAGTGGGCATGAAGAA 57.359 40.909 0.00 0.00 0.00 2.52
5050 12801 4.640771 AGACTAAGTGGGCATGAAGAAA 57.359 40.909 0.00 0.00 0.00 2.52
5051 12802 4.583871 AGACTAAGTGGGCATGAAGAAAG 58.416 43.478 0.00 0.00 0.00 2.62
5052 12803 4.287067 AGACTAAGTGGGCATGAAGAAAGA 59.713 41.667 0.00 0.00 0.00 2.52
5053 12804 4.327680 ACTAAGTGGGCATGAAGAAAGAC 58.672 43.478 0.00 0.00 0.00 3.01
5054 12805 2.957402 AGTGGGCATGAAGAAAGACA 57.043 45.000 0.00 0.00 0.00 3.41
5055 12806 2.508526 AGTGGGCATGAAGAAAGACAC 58.491 47.619 0.00 0.00 0.00 3.67
5056 12807 1.197721 GTGGGCATGAAGAAAGACACG 59.802 52.381 0.00 0.00 0.00 4.49
5057 12808 1.202758 TGGGCATGAAGAAAGACACGT 60.203 47.619 0.00 0.00 0.00 4.49
5058 12809 1.197721 GGGCATGAAGAAAGACACGTG 59.802 52.381 15.48 15.48 0.00 4.49
5059 12810 1.197721 GGCATGAAGAAAGACACGTGG 59.802 52.381 21.57 1.66 0.00 4.94
5060 12811 1.400242 GCATGAAGAAAGACACGTGGC 60.400 52.381 21.57 18.79 0.00 5.01
5061 12812 1.872952 CATGAAGAAAGACACGTGGCA 59.127 47.619 26.11 0.00 0.00 4.92
5062 12813 2.031258 TGAAGAAAGACACGTGGCAA 57.969 45.000 26.11 0.00 0.00 4.52
5063 12814 2.571212 TGAAGAAAGACACGTGGCAAT 58.429 42.857 26.11 11.97 0.00 3.56
5064 12815 2.948979 TGAAGAAAGACACGTGGCAATT 59.051 40.909 26.11 18.27 0.00 2.32
5065 12816 3.243035 TGAAGAAAGACACGTGGCAATTG 60.243 43.478 26.11 0.00 0.00 2.32
5066 12817 1.608590 AGAAAGACACGTGGCAATTGG 59.391 47.619 26.11 0.00 0.00 3.16
5067 12818 1.606668 GAAAGACACGTGGCAATTGGA 59.393 47.619 26.11 0.00 0.00 3.53
5068 12819 1.238439 AAGACACGTGGCAATTGGAG 58.762 50.000 26.11 0.00 0.00 3.86
5069 12820 1.210155 GACACGTGGCAATTGGAGC 59.790 57.895 18.77 0.00 0.00 4.70
5070 12821 1.514678 GACACGTGGCAATTGGAGCA 61.515 55.000 18.77 0.00 0.00 4.26
5071 12822 1.210931 CACGTGGCAATTGGAGCAG 59.789 57.895 7.95 0.00 0.00 4.24
5072 12823 1.973281 ACGTGGCAATTGGAGCAGG 60.973 57.895 7.72 0.00 0.00 4.85
5073 12824 2.575461 GTGGCAATTGGAGCAGGC 59.425 61.111 7.72 0.00 0.00 4.85
5074 12825 3.063704 TGGCAATTGGAGCAGGCG 61.064 61.111 7.72 0.00 0.00 5.52
5075 12826 3.830192 GGCAATTGGAGCAGGCGG 61.830 66.667 7.72 0.00 0.00 6.13
5076 12827 3.064324 GCAATTGGAGCAGGCGGT 61.064 61.111 7.72 0.00 0.00 5.68
5077 12828 2.879907 CAATTGGAGCAGGCGGTG 59.120 61.111 0.00 0.00 0.00 4.94
5078 12829 2.361610 AATTGGAGCAGGCGGTGG 60.362 61.111 0.00 0.00 0.00 4.61
5079 12830 2.905996 AATTGGAGCAGGCGGTGGA 61.906 57.895 0.00 0.00 0.00 4.02
5080 12831 2.215451 AATTGGAGCAGGCGGTGGAT 62.215 55.000 0.00 0.00 0.00 3.41
5081 12832 2.898920 ATTGGAGCAGGCGGTGGATG 62.899 60.000 0.00 0.00 0.00 3.51
5107 12858 4.742274 CGATCCGCCGGTTGATTA 57.258 55.556 1.63 0.00 0.00 1.75
5108 12859 3.210857 CGATCCGCCGGTTGATTAT 57.789 52.632 1.63 0.00 0.00 1.28
5109 12860 1.508632 CGATCCGCCGGTTGATTATT 58.491 50.000 1.63 0.00 0.00 1.40
5110 12861 2.679450 CGATCCGCCGGTTGATTATTA 58.321 47.619 1.63 0.00 0.00 0.98
5111 12862 2.666508 CGATCCGCCGGTTGATTATTAG 59.333 50.000 1.63 0.00 0.00 1.73
5112 12863 2.536761 TCCGCCGGTTGATTATTAGG 57.463 50.000 1.63 0.00 0.00 2.69
5113 12864 2.040939 TCCGCCGGTTGATTATTAGGA 58.959 47.619 1.63 0.00 0.00 2.94
5114 12865 2.635915 TCCGCCGGTTGATTATTAGGAT 59.364 45.455 1.63 0.00 0.00 3.24
5115 12866 3.071892 TCCGCCGGTTGATTATTAGGATT 59.928 43.478 1.63 0.00 0.00 3.01
5116 12867 3.818773 CCGCCGGTTGATTATTAGGATTT 59.181 43.478 1.90 0.00 0.00 2.17
5117 12868 4.083484 CCGCCGGTTGATTATTAGGATTTC 60.083 45.833 1.90 0.00 0.00 2.17
5118 12869 4.083484 CGCCGGTTGATTATTAGGATTTCC 60.083 45.833 1.90 0.00 0.00 3.13
5119 12870 4.217767 GCCGGTTGATTATTAGGATTTCCC 59.782 45.833 1.90 0.00 36.42 3.97
5120 12871 4.765339 CCGGTTGATTATTAGGATTTCCCC 59.235 45.833 0.00 0.00 36.42 4.81
5121 12872 4.765339 CGGTTGATTATTAGGATTTCCCCC 59.235 45.833 0.00 0.00 36.42 5.40
5141 12892 5.685728 CCCCCAAAGAAAACCAAAATAACA 58.314 37.500 0.00 0.00 0.00 2.41
5142 12893 6.122964 CCCCCAAAGAAAACCAAAATAACAA 58.877 36.000 0.00 0.00 0.00 2.83
5143 12894 6.603599 CCCCCAAAGAAAACCAAAATAACAAA 59.396 34.615 0.00 0.00 0.00 2.83
5144 12895 7.286546 CCCCCAAAGAAAACCAAAATAACAAAT 59.713 33.333 0.00 0.00 0.00 2.32
5145 12896 9.343539 CCCCAAAGAAAACCAAAATAACAAATA 57.656 29.630 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.775561 GTGAAATAGGTGAAGGAAATATGACCT 59.224 37.037 0.00 0.00 37.57 3.85
1 2 7.013369 GGTGAAATAGGTGAAGGAAATATGACC 59.987 40.741 0.00 0.00 0.00 4.02
2 3 7.556275 TGGTGAAATAGGTGAAGGAAATATGAC 59.444 37.037 0.00 0.00 0.00 3.06
3 4 7.638444 TGGTGAAATAGGTGAAGGAAATATGA 58.362 34.615 0.00 0.00 0.00 2.15
4 5 7.775093 TCTGGTGAAATAGGTGAAGGAAATATG 59.225 37.037 0.00 0.00 0.00 1.78
5 6 7.872138 TCTGGTGAAATAGGTGAAGGAAATAT 58.128 34.615 0.00 0.00 0.00 1.28
6 7 7.265599 TCTGGTGAAATAGGTGAAGGAAATA 57.734 36.000 0.00 0.00 0.00 1.40
7 8 6.139679 TCTGGTGAAATAGGTGAAGGAAAT 57.860 37.500 0.00 0.00 0.00 2.17
8 9 5.576563 TCTGGTGAAATAGGTGAAGGAAA 57.423 39.130 0.00 0.00 0.00 3.13
9 10 5.576563 TTCTGGTGAAATAGGTGAAGGAA 57.423 39.130 0.00 0.00 0.00 3.36
10 11 5.576563 TTTCTGGTGAAATAGGTGAAGGA 57.423 39.130 0.00 0.00 37.27 3.36
481 496 8.883954 TTCAATTGCACATTTTCTGAAACATA 57.116 26.923 1.58 0.00 0.00 2.29
528 551 1.770294 TTTCACTTTCCACGGCCTTT 58.230 45.000 0.00 0.00 0.00 3.11
736 1065 2.485038 TGCAATACACTCTGTGCATGTG 59.515 45.455 0.12 5.55 41.85 3.21
803 1145 1.955778 CGGGCCATTCATTGAATGCTA 59.044 47.619 26.93 0.00 45.48 3.49
872 1214 9.672673 CTCTCTTGTTTCTTTCAATCCCTATTA 57.327 33.333 0.00 0.00 0.00 0.98
991 1336 2.027073 TGCGTGTGAGTGATTCGGC 61.027 57.895 0.00 0.00 0.00 5.54
992 1337 0.943835 TGTGCGTGTGAGTGATTCGG 60.944 55.000 0.00 0.00 0.00 4.30
993 1338 0.436150 CTGTGCGTGTGAGTGATTCG 59.564 55.000 0.00 0.00 0.00 3.34
994 1339 0.164647 GCTGTGCGTGTGAGTGATTC 59.835 55.000 0.00 0.00 0.00 2.52
996 1341 0.668706 GAGCTGTGCGTGTGAGTGAT 60.669 55.000 0.00 0.00 0.00 3.06
998 1343 2.313172 GGAGCTGTGCGTGTGAGTG 61.313 63.158 0.00 0.00 0.00 3.51
999 1344 2.029666 GGAGCTGTGCGTGTGAGT 59.970 61.111 0.00 0.00 0.00 3.41
1329 1689 3.118884 GCGAAGTTGGTCCTAAGGATGTA 60.119 47.826 0.00 0.00 32.73 2.29
1337 1697 1.053424 AGTTGGCGAAGTTGGTCCTA 58.947 50.000 0.00 0.00 0.00 2.94
1379 1744 5.579904 GTCTATTTTGAAACGGAGGGAGTAC 59.420 44.000 0.00 0.00 0.00 2.73
1441 1827 9.782028 CGTTTCAAAATACATGACTCAATTTTG 57.218 29.630 15.46 15.46 44.73 2.44
1444 1830 7.881142 TCCGTTTCAAAATACATGACTCAATT 58.119 30.769 0.00 0.00 0.00 2.32
1445 1831 7.362056 CCTCCGTTTCAAAATACATGACTCAAT 60.362 37.037 0.00 0.00 0.00 2.57
1446 1832 6.072728 CCTCCGTTTCAAAATACATGACTCAA 60.073 38.462 0.00 0.00 0.00 3.02
1447 1833 5.411361 CCTCCGTTTCAAAATACATGACTCA 59.589 40.000 0.00 0.00 0.00 3.41
1449 1835 5.556915 TCCTCCGTTTCAAAATACATGACT 58.443 37.500 0.00 0.00 0.00 3.41
1450 1836 5.873179 TCCTCCGTTTCAAAATACATGAC 57.127 39.130 0.00 0.00 0.00 3.06
1451 1837 6.001460 ACTTCCTCCGTTTCAAAATACATGA 58.999 36.000 0.00 0.00 0.00 3.07
1453 1839 7.166167 ACTACTTCCTCCGTTTCAAAATACAT 58.834 34.615 0.00 0.00 0.00 2.29
1454 1840 6.527423 ACTACTTCCTCCGTTTCAAAATACA 58.473 36.000 0.00 0.00 0.00 2.29
1455 1841 7.599998 TGTACTACTTCCTCCGTTTCAAAATAC 59.400 37.037 0.00 0.00 0.00 1.89
1458 1844 5.916318 TGTACTACTTCCTCCGTTTCAAAA 58.084 37.500 0.00 0.00 0.00 2.44
1461 1847 4.147321 ACTGTACTACTTCCTCCGTTTCA 58.853 43.478 0.00 0.00 0.00 2.69
1462 1848 4.780275 ACTGTACTACTTCCTCCGTTTC 57.220 45.455 0.00 0.00 0.00 2.78
1463 1849 5.772169 AGTTACTGTACTACTTCCTCCGTTT 59.228 40.000 0.00 0.00 0.00 3.60
1464 1850 5.320277 AGTTACTGTACTACTTCCTCCGTT 58.680 41.667 0.00 0.00 0.00 4.44
1465 1851 4.916183 AGTTACTGTACTACTTCCTCCGT 58.084 43.478 0.00 0.00 0.00 4.69
1466 1852 6.992063 TTAGTTACTGTACTACTTCCTCCG 57.008 41.667 0.00 0.00 30.62 4.63
1467 1853 9.583765 CAAATTAGTTACTGTACTACTTCCTCC 57.416 37.037 0.00 0.00 30.62 4.30
1468 1854 9.583765 CCAAATTAGTTACTGTACTACTTCCTC 57.416 37.037 0.00 0.00 30.62 3.71
1469 1855 9.317827 TCCAAATTAGTTACTGTACTACTTCCT 57.682 33.333 0.00 0.00 30.62 3.36
1564 5255 1.156736 CGCCCTTTAGTTGTGTGAGG 58.843 55.000 0.00 0.00 0.00 3.86
1565 5256 0.517316 GCGCCCTTTAGTTGTGTGAG 59.483 55.000 0.00 0.00 0.00 3.51
1566 5257 1.225376 CGCGCCCTTTAGTTGTGTGA 61.225 55.000 0.00 0.00 0.00 3.58
1567 5258 1.206578 CGCGCCCTTTAGTTGTGTG 59.793 57.895 0.00 0.00 0.00 3.82
1922 5718 4.736896 GACCCCGACAGCGTGTCC 62.737 72.222 11.01 0.00 44.20 4.02
2061 5863 4.933064 GACCTCGATCCTGCGCCG 62.933 72.222 4.18 0.00 0.00 6.46
2085 5887 2.420022 GGATGCGCTTGTACATGAACTT 59.580 45.455 9.73 2.11 0.00 2.66
2120 5922 3.664495 TCGCCGTCCGATATCTCC 58.336 61.111 0.34 0.00 41.89 3.71
2137 5939 1.528076 TCGTGTGCCTTGCCAATGT 60.528 52.632 0.00 0.00 0.00 2.71
2138 5940 1.081242 GTCGTGTGCCTTGCCAATG 60.081 57.895 0.00 0.00 0.00 2.82
2139 5941 1.528076 TGTCGTGTGCCTTGCCAAT 60.528 52.632 0.00 0.00 0.00 3.16
2140 5942 2.124529 TGTCGTGTGCCTTGCCAA 60.125 55.556 0.00 0.00 0.00 4.52
2141 5943 2.899838 GTGTCGTGTGCCTTGCCA 60.900 61.111 0.00 0.00 0.00 4.92
2142 5944 2.591715 AGTGTCGTGTGCCTTGCC 60.592 61.111 0.00 0.00 0.00 4.52
2199 6054 2.733552 CCTGTCAAGTCATCAACGTCAG 59.266 50.000 0.00 0.00 0.00 3.51
2569 6452 0.317160 AGAGTGTGCCGTCGATTCAA 59.683 50.000 0.00 0.00 0.00 2.69
2570 6453 1.170442 TAGAGTGTGCCGTCGATTCA 58.830 50.000 0.00 0.00 0.00 2.57
2733 6663 4.820897 TGCATAAACAAGTCTCAGTCGAT 58.179 39.130 0.00 0.00 0.00 3.59
2741 6671 7.239166 CATCGACTAATGCATAAACAAGTCT 57.761 36.000 0.00 0.00 32.96 3.24
2755 6685 5.880887 TCTCACGGATATAGCATCGACTAAT 59.119 40.000 0.00 0.00 0.00 1.73
2772 6702 4.363999 GACCTCAATGTAAGATCTCACGG 58.636 47.826 0.00 0.00 0.00 4.94
2868 6802 1.550976 GTTGGGTGGGACTAGTCTCAG 59.449 57.143 25.97 0.00 41.41 3.35
2870 6804 0.531200 CGTTGGGTGGGACTAGTCTC 59.469 60.000 21.88 19.27 0.00 3.36
2871 6805 0.113776 TCGTTGGGTGGGACTAGTCT 59.886 55.000 21.88 0.00 0.00 3.24
2872 6806 0.971386 TTCGTTGGGTGGGACTAGTC 59.029 55.000 14.87 14.87 0.00 2.59
2873 6807 1.426751 TTTCGTTGGGTGGGACTAGT 58.573 50.000 0.00 0.00 0.00 2.57
2880 6820 1.335506 CGATGGTTTTTCGTTGGGTGG 60.336 52.381 0.00 0.00 32.08 4.61
2900 6841 4.278419 GGTATCAACTTGGGGCACATTATC 59.722 45.833 0.00 0.00 0.00 1.75
2902 6843 3.626222 GGGTATCAACTTGGGGCACATTA 60.626 47.826 0.00 0.00 0.00 1.90
2940 6881 1.053835 TTGGTGGCTCAGGTCTGACA 61.054 55.000 10.38 0.00 35.46 3.58
2981 9057 1.077501 TGGCCATGGTCTGCTTAGC 60.078 57.895 19.09 0.00 0.00 3.09
2984 9060 2.362120 GCTGGCCATGGTCTGCTT 60.362 61.111 33.59 0.00 40.66 3.91
2996 10148 1.019805 GGTTTAGTCCACGAGCTGGC 61.020 60.000 0.00 0.00 40.39 4.85
3130 10283 1.331447 TGCATCAGCGCATGTGAATAC 59.669 47.619 11.47 0.00 46.23 1.89
3180 10333 5.394883 CCATTGCAGTGCTAATGAAATTCCT 60.395 40.000 27.48 0.42 37.87 3.36
3198 10351 2.981898 ACGGGTAAGTAAGTCCATTGC 58.018 47.619 0.00 0.00 0.00 3.56
3206 10359 4.100707 TCGACATCAACGGGTAAGTAAG 57.899 45.455 0.00 0.00 0.00 2.34
3254 10409 1.339055 TGCCAACTCCTTCCTTGATCG 60.339 52.381 0.00 0.00 0.00 3.69
3297 10454 7.732140 TCCATACTATCAATGATCTCCTTGACT 59.268 37.037 0.00 2.83 34.43 3.41
3395 10552 3.183775 CACAGTTCGGCACTACAAACTAC 59.816 47.826 0.00 0.00 32.76 2.73
3403 10560 1.588674 CAAACCACAGTTCGGCACTA 58.411 50.000 0.00 0.00 34.19 2.74
3404 10561 1.101049 CCAAACCACAGTTCGGCACT 61.101 55.000 0.00 0.00 34.19 4.40
3435 10592 8.526147 CCAATAATTTTCACAACCTCTTCTGAT 58.474 33.333 0.00 0.00 0.00 2.90
3436 10593 7.723616 TCCAATAATTTTCACAACCTCTTCTGA 59.276 33.333 0.00 0.00 0.00 3.27
3474 10631 4.789012 ATTACTCAAAGTTCGGTCGGTA 57.211 40.909 0.00 0.00 0.00 4.02
3477 10634 6.263344 TCTCATATTACTCAAAGTTCGGTCG 58.737 40.000 0.00 0.00 0.00 4.79
3478 10635 7.760340 AGTTCTCATATTACTCAAAGTTCGGTC 59.240 37.037 0.00 0.00 0.00 4.79
3479 10636 7.612677 AGTTCTCATATTACTCAAAGTTCGGT 58.387 34.615 0.00 0.00 0.00 4.69
3480 10637 8.480643 AAGTTCTCATATTACTCAAAGTTCGG 57.519 34.615 0.00 0.00 0.00 4.30
3521 10678 3.237268 TGTGATGGTTTTAGCCTGGTT 57.763 42.857 0.00 0.00 0.00 3.67
3528 10685 6.925165 AGCTCAACAAATTGTGATGGTTTTAG 59.075 34.615 0.00 0.00 37.11 1.85
3547 10704 2.330440 TCTGAAGTTGTGCAGCTCAA 57.670 45.000 5.77 5.77 32.27 3.02
3562 10719 7.445096 TGAAGCACAAAAAGAACTCATATCTGA 59.555 33.333 0.00 0.00 0.00 3.27
3658 10825 1.324740 TGGCGTAGGGTGCGTAGAAT 61.325 55.000 0.00 0.00 0.00 2.40
3752 10920 1.003233 GGCTCTCCGGCAAGAACTT 60.003 57.895 0.00 0.00 38.25 2.66
3758 10926 2.063015 TTGAAAGGGCTCTCCGGCAA 62.063 55.000 0.00 0.00 41.52 4.52
3887 11546 2.143122 GACGCTTTCATCCTTGTCACA 58.857 47.619 0.00 0.00 0.00 3.58
3900 11559 1.414919 TGGTCCTGTAGTTGACGCTTT 59.585 47.619 0.00 0.00 32.19 3.51
3901 11560 1.045407 TGGTCCTGTAGTTGACGCTT 58.955 50.000 0.00 0.00 32.19 4.68
3986 11645 4.170292 ACGCGTATCTTGAGTACAAAGT 57.830 40.909 11.67 0.00 35.49 2.66
4037 11701 5.460091 CTTGAGACATTCAATCGCGAGAATA 59.540 40.000 19.45 4.98 44.48 1.75
4039 11703 3.614176 CTTGAGACATTCAATCGCGAGAA 59.386 43.478 16.66 14.24 44.48 2.87
4040 11704 3.182182 CTTGAGACATTCAATCGCGAGA 58.818 45.455 16.66 4.09 44.48 4.04
4090 11755 7.768582 TCACAAAATATATGTTCACACGGATCT 59.231 33.333 0.00 0.00 0.00 2.75
4098 11763 7.826690 AGGTGGTTCACAAAATATATGTTCAC 58.173 34.615 0.38 0.00 35.86 3.18
4189 11862 8.337739 TGCCATATTTAAAAGTACTAGGGGAAA 58.662 33.333 0.00 0.00 0.00 3.13
4191 11864 7.454553 TGCCATATTTAAAAGTACTAGGGGA 57.545 36.000 0.00 0.00 0.00 4.81
4192 11865 9.802039 TTATGCCATATTTAAAAGTACTAGGGG 57.198 33.333 0.00 0.00 0.00 4.79
4292 12011 9.074443 GTCATGCACAATTTTGTTTTTGAATTT 57.926 25.926 0.00 0.00 39.91 1.82
4293 12012 8.242053 TGTCATGCACAATTTTGTTTTTGAATT 58.758 25.926 0.00 0.00 39.91 2.17
4294 12013 7.759465 TGTCATGCACAATTTTGTTTTTGAAT 58.241 26.923 0.00 0.00 39.91 2.57
4508 12257 8.770438 TTTTTAAAATGCACACTGAGTTTTCT 57.230 26.923 0.55 0.00 0.00 2.52
4609 12360 6.826893 ACACATTGAACATTTTTGTGTAGC 57.173 33.333 5.28 0.00 46.51 3.58
4663 12414 4.022329 CGCCTTCTTTGGGTGACTTTATTT 60.022 41.667 0.00 0.00 36.54 1.40
4691 12442 4.094590 TCGAGCCGGCGAATATTTTAAAAA 59.905 37.500 23.20 0.00 37.35 1.94
4692 12443 3.622163 TCGAGCCGGCGAATATTTTAAAA 59.378 39.130 23.20 2.51 37.35 1.52
4693 12444 3.001533 GTCGAGCCGGCGAATATTTTAAA 59.998 43.478 23.20 0.00 42.55 1.52
4694 12445 2.540931 GTCGAGCCGGCGAATATTTTAA 59.459 45.455 23.20 0.00 42.55 1.52
4695 12446 2.129607 GTCGAGCCGGCGAATATTTTA 58.870 47.619 23.20 0.00 42.55 1.52
4696 12447 0.935196 GTCGAGCCGGCGAATATTTT 59.065 50.000 23.20 0.00 42.55 1.82
4697 12448 0.179094 TGTCGAGCCGGCGAATATTT 60.179 50.000 23.20 0.00 42.55 1.40
4698 12449 0.597637 CTGTCGAGCCGGCGAATATT 60.598 55.000 23.20 0.68 42.55 1.28
4699 12450 1.007271 CTGTCGAGCCGGCGAATAT 60.007 57.895 23.20 1.65 42.55 1.28
4700 12451 2.411701 CTGTCGAGCCGGCGAATA 59.588 61.111 23.20 7.91 42.55 1.75
4709 12460 0.382515 AGATCTAACGGCTGTCGAGC 59.617 55.000 9.35 1.52 45.40 5.03
4710 12461 2.873472 ACTAGATCTAACGGCTGTCGAG 59.127 50.000 9.35 0.00 42.43 4.04
4711 12462 2.612672 CACTAGATCTAACGGCTGTCGA 59.387 50.000 9.35 0.00 42.43 4.20
4712 12463 2.355132 ACACTAGATCTAACGGCTGTCG 59.645 50.000 0.00 0.00 45.88 4.35
4713 12464 3.377485 TCACACTAGATCTAACGGCTGTC 59.623 47.826 0.00 0.00 0.00 3.51
4714 12465 3.353557 TCACACTAGATCTAACGGCTGT 58.646 45.455 3.57 0.00 0.00 4.40
4715 12466 4.106197 GTTCACACTAGATCTAACGGCTG 58.894 47.826 3.57 0.00 0.00 4.85
4716 12467 3.130693 GGTTCACACTAGATCTAACGGCT 59.869 47.826 3.57 0.00 0.00 5.52
4717 12468 3.130693 AGGTTCACACTAGATCTAACGGC 59.869 47.826 3.57 0.00 0.00 5.68
4718 12469 4.985538 AGGTTCACACTAGATCTAACGG 57.014 45.455 3.57 0.00 0.00 4.44
4719 12470 7.133513 GTCATAGGTTCACACTAGATCTAACG 58.866 42.308 3.57 0.38 0.00 3.18
4720 12471 7.427214 GGTCATAGGTTCACACTAGATCTAAC 58.573 42.308 3.57 0.00 0.00 2.34
4721 12472 6.550108 GGGTCATAGGTTCACACTAGATCTAA 59.450 42.308 3.57 0.00 0.00 2.10
4722 12473 6.069331 GGGTCATAGGTTCACACTAGATCTA 58.931 44.000 1.69 1.69 0.00 1.98
4723 12474 4.896482 GGGTCATAGGTTCACACTAGATCT 59.104 45.833 0.00 0.00 0.00 2.75
4724 12475 4.649674 TGGGTCATAGGTTCACACTAGATC 59.350 45.833 0.00 0.00 0.00 2.75
4725 12476 4.620723 TGGGTCATAGGTTCACACTAGAT 58.379 43.478 0.00 0.00 0.00 1.98
4726 12477 4.023980 CTGGGTCATAGGTTCACACTAGA 58.976 47.826 0.00 0.00 0.00 2.43
4727 12478 4.023980 TCTGGGTCATAGGTTCACACTAG 58.976 47.826 0.00 0.00 0.00 2.57
4728 12479 3.767673 GTCTGGGTCATAGGTTCACACTA 59.232 47.826 0.00 0.00 0.00 2.74
4729 12480 2.567615 GTCTGGGTCATAGGTTCACACT 59.432 50.000 0.00 0.00 0.00 3.55
4730 12481 2.674177 CGTCTGGGTCATAGGTTCACAC 60.674 54.545 0.00 0.00 0.00 3.82
4731 12482 1.548719 CGTCTGGGTCATAGGTTCACA 59.451 52.381 0.00 0.00 0.00 3.58
4732 12483 1.739371 GCGTCTGGGTCATAGGTTCAC 60.739 57.143 0.00 0.00 0.00 3.18
4733 12484 0.535335 GCGTCTGGGTCATAGGTTCA 59.465 55.000 0.00 0.00 0.00 3.18
4734 12485 0.527817 CGCGTCTGGGTCATAGGTTC 60.528 60.000 0.00 0.00 0.00 3.62
4735 12486 1.255667 ACGCGTCTGGGTCATAGGTT 61.256 55.000 5.58 0.00 36.35 3.50
4736 12487 1.255667 AACGCGTCTGGGTCATAGGT 61.256 55.000 14.44 0.00 40.91 3.08
4737 12488 0.527817 GAACGCGTCTGGGTCATAGG 60.528 60.000 14.44 0.00 40.91 2.57
4738 12489 0.456221 AGAACGCGTCTGGGTCATAG 59.544 55.000 14.44 0.00 40.91 2.23
4739 12490 0.892755 AAGAACGCGTCTGGGTCATA 59.107 50.000 14.44 0.00 40.91 2.15
4740 12491 0.892755 TAAGAACGCGTCTGGGTCAT 59.107 50.000 14.44 0.78 40.91 3.06
4741 12492 0.038892 GTAAGAACGCGTCTGGGTCA 60.039 55.000 14.44 0.00 40.91 4.02
4742 12493 0.038892 TGTAAGAACGCGTCTGGGTC 60.039 55.000 14.44 5.88 40.91 4.46
4743 12494 0.390124 TTGTAAGAACGCGTCTGGGT 59.610 50.000 14.44 0.00 44.11 4.51
4744 12495 1.722011 ATTGTAAGAACGCGTCTGGG 58.278 50.000 14.44 0.00 36.40 4.45
4745 12496 2.724839 GCAATTGTAAGAACGCGTCTGG 60.725 50.000 14.44 0.00 36.40 3.86
4746 12497 2.096466 TGCAATTGTAAGAACGCGTCTG 60.096 45.455 14.44 0.20 36.40 3.51
4747 12498 2.139917 TGCAATTGTAAGAACGCGTCT 58.860 42.857 14.44 8.97 38.69 4.18
4748 12499 2.587612 TGCAATTGTAAGAACGCGTC 57.412 45.000 14.44 6.38 0.00 5.19
4749 12500 2.032302 TGTTGCAATTGTAAGAACGCGT 59.968 40.909 5.58 5.58 0.00 6.01
4750 12501 2.645163 TGTTGCAATTGTAAGAACGCG 58.355 42.857 9.39 3.53 0.00 6.01
4751 12502 4.354725 GTTGTTGCAATTGTAAGAACGC 57.645 40.909 25.56 10.85 35.18 4.84
4753 12504 5.116983 CCATCGTTGTTGCAATTGTAAGAAC 59.883 40.000 28.04 28.04 39.34 3.01
4754 12505 5.218885 CCATCGTTGTTGCAATTGTAAGAA 58.781 37.500 13.59 13.59 0.00 2.52
4755 12506 4.277174 ACCATCGTTGTTGCAATTGTAAGA 59.723 37.500 9.39 5.57 0.00 2.10
4756 12507 4.382457 CACCATCGTTGTTGCAATTGTAAG 59.618 41.667 9.39 0.00 0.00 2.34
4757 12508 4.202060 ACACCATCGTTGTTGCAATTGTAA 60.202 37.500 0.59 4.71 0.00 2.41
4758 12509 3.316588 ACACCATCGTTGTTGCAATTGTA 59.683 39.130 0.59 0.00 0.00 2.41
4759 12510 2.100584 ACACCATCGTTGTTGCAATTGT 59.899 40.909 0.59 0.00 0.00 2.71
4760 12511 2.741612 ACACCATCGTTGTTGCAATTG 58.258 42.857 0.59 0.00 0.00 2.32
4761 12512 3.122297 CAACACCATCGTTGTTGCAATT 58.878 40.909 0.59 0.00 41.12 2.32
4762 12513 2.741612 CAACACCATCGTTGTTGCAAT 58.258 42.857 0.59 0.00 41.12 3.56
4763 12514 2.200792 CAACACCATCGTTGTTGCAA 57.799 45.000 0.00 0.00 41.12 4.08
4764 12515 3.934521 CAACACCATCGTTGTTGCA 57.065 47.368 2.50 0.00 41.12 4.08
4766 12517 0.660005 CCGCAACACCATCGTTGTTG 60.660 55.000 10.23 10.23 46.47 3.33
4767 12518 0.816018 TCCGCAACACCATCGTTGTT 60.816 50.000 5.76 0.00 46.47 2.83
4768 12519 0.816018 TTCCGCAACACCATCGTTGT 60.816 50.000 5.76 0.00 46.47 3.32
4770 12521 0.309612 GTTTCCGCAACACCATCGTT 59.690 50.000 0.00 0.00 35.18 3.85
4771 12522 0.534203 AGTTTCCGCAACACCATCGT 60.534 50.000 0.00 0.00 37.93 3.73
4772 12523 0.591170 AAGTTTCCGCAACACCATCG 59.409 50.000 0.00 0.00 37.93 3.84
4773 12524 2.661594 GAAAGTTTCCGCAACACCATC 58.338 47.619 4.11 0.00 37.93 3.51
4774 12525 1.001815 CGAAAGTTTCCGCAACACCAT 60.002 47.619 10.01 0.00 37.93 3.55
4775 12526 0.378962 CGAAAGTTTCCGCAACACCA 59.621 50.000 10.01 0.00 37.93 4.17
4776 12527 3.157922 CGAAAGTTTCCGCAACACC 57.842 52.632 10.01 0.00 37.93 4.16
4783 12534 2.032030 ACATCTGTTGCGAAAGTTTCCG 60.032 45.455 10.01 6.57 0.00 4.30
4784 12535 3.003275 TGACATCTGTTGCGAAAGTTTCC 59.997 43.478 10.01 3.92 0.00 3.13
4785 12536 4.209452 TGACATCTGTTGCGAAAGTTTC 57.791 40.909 5.47 5.47 0.00 2.78
4786 12537 4.036734 ACATGACATCTGTTGCGAAAGTTT 59.963 37.500 0.00 0.00 0.00 2.66
4787 12538 3.565482 ACATGACATCTGTTGCGAAAGTT 59.435 39.130 0.00 0.00 0.00 2.66
4788 12539 3.141398 ACATGACATCTGTTGCGAAAGT 58.859 40.909 0.00 0.00 0.00 2.66
4789 12540 3.818961 ACATGACATCTGTTGCGAAAG 57.181 42.857 0.00 0.00 0.00 2.62
4790 12541 5.029650 GTAACATGACATCTGTTGCGAAA 57.970 39.130 0.00 0.00 37.41 3.46
4791 12542 4.661993 GTAACATGACATCTGTTGCGAA 57.338 40.909 0.00 0.00 37.41 4.70
4794 12545 3.000041 TCCGTAACATGACATCTGTTGC 59.000 45.455 0.00 3.03 37.41 4.17
4795 12546 5.179368 AGTTTCCGTAACATGACATCTGTTG 59.821 40.000 0.00 0.00 39.30 3.33
4796 12547 5.305585 AGTTTCCGTAACATGACATCTGTT 58.694 37.500 0.00 0.45 39.30 3.16
4797 12548 4.894784 AGTTTCCGTAACATGACATCTGT 58.105 39.130 0.00 0.00 39.30 3.41
4798 12549 5.862924 AAGTTTCCGTAACATGACATCTG 57.137 39.130 0.00 0.00 39.30 2.90
4799 12550 6.668323 CAAAAGTTTCCGTAACATGACATCT 58.332 36.000 0.00 0.00 39.30 2.90
4800 12551 5.342259 GCAAAAGTTTCCGTAACATGACATC 59.658 40.000 0.00 0.00 39.30 3.06
4801 12552 5.219633 GCAAAAGTTTCCGTAACATGACAT 58.780 37.500 0.00 0.00 39.30 3.06
4802 12553 4.096532 TGCAAAAGTTTCCGTAACATGACA 59.903 37.500 0.00 0.00 39.30 3.58
4803 12554 4.602995 TGCAAAAGTTTCCGTAACATGAC 58.397 39.130 0.00 0.00 39.30 3.06
4804 12555 4.902443 TGCAAAAGTTTCCGTAACATGA 57.098 36.364 0.00 0.00 39.30 3.07
4805 12556 4.800993 TGTTGCAAAAGTTTCCGTAACATG 59.199 37.500 0.00 0.00 39.30 3.21
4806 12557 5.000012 TGTTGCAAAAGTTTCCGTAACAT 58.000 34.783 0.00 0.00 39.30 2.71
4807 12558 4.156190 TCTGTTGCAAAAGTTTCCGTAACA 59.844 37.500 16.28 15.77 39.30 2.41
4808 12559 4.664188 TCTGTTGCAAAAGTTTCCGTAAC 58.336 39.130 16.28 10.23 36.99 2.50
4809 12560 4.966965 TCTGTTGCAAAAGTTTCCGTAA 57.033 36.364 16.28 0.00 0.00 3.18
4810 12561 4.396790 ACTTCTGTTGCAAAAGTTTCCGTA 59.603 37.500 16.28 0.00 29.09 4.02
4811 12562 3.192633 ACTTCTGTTGCAAAAGTTTCCGT 59.807 39.130 16.28 5.16 29.09 4.69
4812 12563 3.769536 ACTTCTGTTGCAAAAGTTTCCG 58.230 40.909 16.28 4.60 29.09 4.30
4813 12564 4.112634 GGACTTCTGTTGCAAAAGTTTCC 58.887 43.478 16.28 15.09 33.54 3.13
4814 12565 4.800471 CAGGACTTCTGTTGCAAAAGTTTC 59.200 41.667 16.28 10.55 38.64 2.78
4815 12566 4.747810 CAGGACTTCTGTTGCAAAAGTTT 58.252 39.130 16.28 5.77 38.64 2.66
4816 12567 4.376340 CAGGACTTCTGTTGCAAAAGTT 57.624 40.909 16.28 2.43 38.64 2.66
4828 12579 8.082242 GCAAAAACATTATGTAACAGGACTTCT 58.918 33.333 0.00 0.00 0.00 2.85
4829 12580 7.865385 TGCAAAAACATTATGTAACAGGACTTC 59.135 33.333 0.00 0.00 0.00 3.01
4830 12581 7.721402 TGCAAAAACATTATGTAACAGGACTT 58.279 30.769 0.00 0.00 0.00 3.01
4831 12582 7.283625 TGCAAAAACATTATGTAACAGGACT 57.716 32.000 0.00 0.00 0.00 3.85
4832 12583 7.436673 TGTTGCAAAAACATTATGTAACAGGAC 59.563 33.333 0.00 0.00 42.18 3.85
4833 12584 7.492524 TGTTGCAAAAACATTATGTAACAGGA 58.507 30.769 0.00 0.00 42.18 3.86
4834 12585 7.706281 TGTTGCAAAAACATTATGTAACAGG 57.294 32.000 0.00 0.00 42.18 4.00
4836 12587 7.651304 CCTCTGTTGCAAAAACATTATGTAACA 59.349 33.333 0.00 3.81 43.90 2.41
4837 12588 7.651704 ACCTCTGTTGCAAAAACATTATGTAAC 59.348 33.333 0.00 0.00 39.25 2.50
4838 12589 7.721402 ACCTCTGTTGCAAAAACATTATGTAA 58.279 30.769 0.00 0.00 0.00 2.41
4839 12590 7.283625 ACCTCTGTTGCAAAAACATTATGTA 57.716 32.000 0.00 0.00 0.00 2.29
4840 12591 6.160576 ACCTCTGTTGCAAAAACATTATGT 57.839 33.333 0.00 0.00 0.00 2.29
4841 12592 5.634859 GGACCTCTGTTGCAAAAACATTATG 59.365 40.000 0.00 0.00 0.00 1.90
4842 12593 5.304101 TGGACCTCTGTTGCAAAAACATTAT 59.696 36.000 0.00 0.00 0.00 1.28
4843 12594 4.646945 TGGACCTCTGTTGCAAAAACATTA 59.353 37.500 0.00 0.00 0.00 1.90
4844 12595 3.450457 TGGACCTCTGTTGCAAAAACATT 59.550 39.130 0.00 0.00 0.00 2.71
4845 12596 3.030291 TGGACCTCTGTTGCAAAAACAT 58.970 40.909 0.00 0.00 0.00 2.71
4846 12597 2.426738 CTGGACCTCTGTTGCAAAAACA 59.573 45.455 0.00 0.00 0.00 2.83
4847 12598 2.427095 ACTGGACCTCTGTTGCAAAAAC 59.573 45.455 0.00 0.00 0.00 2.43
4848 12599 2.733956 ACTGGACCTCTGTTGCAAAAA 58.266 42.857 0.00 0.00 0.00 1.94
4849 12600 2.426738 CAACTGGACCTCTGTTGCAAAA 59.573 45.455 0.00 0.00 44.32 2.44
4850 12601 2.023673 CAACTGGACCTCTGTTGCAAA 58.976 47.619 0.00 0.00 44.32 3.68
4851 12602 1.679139 CAACTGGACCTCTGTTGCAA 58.321 50.000 0.00 0.00 44.32 4.08
4852 12603 3.402186 CAACTGGACCTCTGTTGCA 57.598 52.632 10.83 0.00 44.32 4.08
4855 12606 1.071471 CCGCAACTGGACCTCTGTT 59.929 57.895 0.00 0.00 37.91 3.16
4856 12607 1.407656 TTCCGCAACTGGACCTCTGT 61.408 55.000 0.00 0.00 37.89 3.41
4857 12608 0.036010 ATTCCGCAACTGGACCTCTG 60.036 55.000 0.00 0.00 37.89 3.35
4858 12609 0.693049 AATTCCGCAACTGGACCTCT 59.307 50.000 0.00 0.00 37.89 3.69
4859 12610 1.534729 AAATTCCGCAACTGGACCTC 58.465 50.000 0.00 0.00 37.89 3.85
4860 12611 1.995376 AAAATTCCGCAACTGGACCT 58.005 45.000 0.00 0.00 37.89 3.85
4861 12612 2.812358 AAAAATTCCGCAACTGGACC 57.188 45.000 0.00 0.00 37.89 4.46
4916 12667 6.405953 CGAGGTTCTACAACAGGATCTATGTT 60.406 42.308 10.01 10.01 41.47 2.71
4917 12668 5.067936 CGAGGTTCTACAACAGGATCTATGT 59.932 44.000 0.00 0.00 33.70 2.29
4918 12669 5.067936 ACGAGGTTCTACAACAGGATCTATG 59.932 44.000 0.00 0.00 33.70 2.23
4919 12670 5.202004 ACGAGGTTCTACAACAGGATCTAT 58.798 41.667 0.00 0.00 33.70 1.98
4920 12671 4.597004 ACGAGGTTCTACAACAGGATCTA 58.403 43.478 0.00 0.00 33.70 1.98
4921 12672 3.432378 ACGAGGTTCTACAACAGGATCT 58.568 45.455 0.00 0.00 33.70 2.75
4922 12673 3.870633 ACGAGGTTCTACAACAGGATC 57.129 47.619 0.00 0.00 33.70 3.36
4923 12674 3.864921 GCAACGAGGTTCTACAACAGGAT 60.865 47.826 0.00 0.00 33.70 3.24
4924 12675 2.547218 GCAACGAGGTTCTACAACAGGA 60.547 50.000 0.00 0.00 33.70 3.86
4925 12676 1.798813 GCAACGAGGTTCTACAACAGG 59.201 52.381 0.00 0.00 33.70 4.00
4926 12677 2.479837 TGCAACGAGGTTCTACAACAG 58.520 47.619 0.00 0.00 33.70 3.16
4927 12678 2.605837 TGCAACGAGGTTCTACAACA 57.394 45.000 0.00 0.00 33.70 3.33
4928 12679 2.610374 TGTTGCAACGAGGTTCTACAAC 59.390 45.455 23.79 0.00 34.41 3.32
4929 12680 2.610374 GTGTTGCAACGAGGTTCTACAA 59.390 45.455 23.79 0.00 0.00 2.41
4930 12681 2.206750 GTGTTGCAACGAGGTTCTACA 58.793 47.619 23.79 0.45 0.00 2.74
4931 12682 2.206750 TGTGTTGCAACGAGGTTCTAC 58.793 47.619 23.79 14.11 0.00 2.59
4932 12683 2.605837 TGTGTTGCAACGAGGTTCTA 57.394 45.000 23.79 1.33 0.00 2.10
4933 12684 1.745232 TTGTGTTGCAACGAGGTTCT 58.255 45.000 23.79 0.00 31.07 3.01
4934 12685 2.159435 ACTTTGTGTTGCAACGAGGTTC 60.159 45.455 23.79 10.47 36.72 3.62
4935 12686 1.816224 ACTTTGTGTTGCAACGAGGTT 59.184 42.857 23.79 4.48 36.72 3.50
4936 12687 1.132262 CACTTTGTGTTGCAACGAGGT 59.868 47.619 23.79 15.35 36.72 3.85
4937 12688 1.132262 ACACTTTGTGTTGCAACGAGG 59.868 47.619 23.79 14.76 45.08 4.63
4938 12689 2.176369 CACACTTTGTGTTGCAACGAG 58.824 47.619 23.79 19.20 45.08 4.18
4939 12690 2.254918 CACACTTTGTGTTGCAACGA 57.745 45.000 23.79 10.87 45.08 3.85
4978 12729 4.277921 TGTGTTTGCTGCAGTGAATTATCA 59.722 37.500 16.64 0.00 0.00 2.15
4979 12730 4.618489 GTGTGTTTGCTGCAGTGAATTATC 59.382 41.667 16.64 0.00 0.00 1.75
4980 12731 4.037803 TGTGTGTTTGCTGCAGTGAATTAT 59.962 37.500 16.64 0.00 0.00 1.28
4981 12732 3.379688 TGTGTGTTTGCTGCAGTGAATTA 59.620 39.130 16.64 1.97 0.00 1.40
4982 12733 2.166050 TGTGTGTTTGCTGCAGTGAATT 59.834 40.909 16.64 0.00 0.00 2.17
4983 12734 1.750206 TGTGTGTTTGCTGCAGTGAAT 59.250 42.857 16.64 0.00 0.00 2.57
4984 12735 1.172175 TGTGTGTTTGCTGCAGTGAA 58.828 45.000 16.64 7.68 0.00 3.18
4985 12736 1.135431 GTTGTGTGTTTGCTGCAGTGA 60.135 47.619 16.64 0.81 0.00 3.41
4986 12737 1.270971 GTTGTGTGTTTGCTGCAGTG 58.729 50.000 16.64 0.00 0.00 3.66
4987 12738 0.179166 CGTTGTGTGTTTGCTGCAGT 60.179 50.000 16.64 0.00 0.00 4.40
4988 12739 0.866906 CCGTTGTGTGTTTGCTGCAG 60.867 55.000 10.11 10.11 0.00 4.41
4989 12740 1.138459 CCGTTGTGTGTTTGCTGCA 59.862 52.632 0.00 0.00 0.00 4.41
4990 12741 0.457681 AACCGTTGTGTGTTTGCTGC 60.458 50.000 0.00 0.00 0.00 5.25
4991 12742 1.132262 AGAACCGTTGTGTGTTTGCTG 59.868 47.619 0.00 0.00 0.00 4.41
4992 12743 1.132262 CAGAACCGTTGTGTGTTTGCT 59.868 47.619 0.21 0.00 0.00 3.91
4993 12744 1.131504 TCAGAACCGTTGTGTGTTTGC 59.868 47.619 8.16 0.00 0.00 3.68
4994 12745 2.791158 GCTCAGAACCGTTGTGTGTTTG 60.791 50.000 8.16 0.00 0.00 2.93
4995 12746 1.400494 GCTCAGAACCGTTGTGTGTTT 59.600 47.619 8.16 0.00 0.00 2.83
4996 12747 1.014352 GCTCAGAACCGTTGTGTGTT 58.986 50.000 8.16 0.00 0.00 3.32
4997 12748 0.814010 GGCTCAGAACCGTTGTGTGT 60.814 55.000 8.16 0.00 0.00 3.72
4998 12749 0.813610 TGGCTCAGAACCGTTGTGTG 60.814 55.000 8.16 7.13 0.00 3.82
4999 12750 0.107410 TTGGCTCAGAACCGTTGTGT 60.107 50.000 8.16 0.00 0.00 3.72
5000 12751 0.588252 CTTGGCTCAGAACCGTTGTG 59.412 55.000 1.96 1.96 0.00 3.33
5001 12752 0.535102 CCTTGGCTCAGAACCGTTGT 60.535 55.000 0.00 0.00 0.00 3.32
5002 12753 0.250295 TCCTTGGCTCAGAACCGTTG 60.250 55.000 0.00 0.00 0.00 4.10
5003 12754 0.035458 CTCCTTGGCTCAGAACCGTT 59.965 55.000 0.00 0.00 0.00 4.44
5004 12755 0.832135 TCTCCTTGGCTCAGAACCGT 60.832 55.000 0.00 0.00 0.00 4.83
5005 12756 0.321671 TTCTCCTTGGCTCAGAACCG 59.678 55.000 0.00 0.00 0.00 4.44
5006 12757 1.625818 TCTTCTCCTTGGCTCAGAACC 59.374 52.381 0.00 0.00 0.00 3.62
5007 12758 3.625649 ATCTTCTCCTTGGCTCAGAAC 57.374 47.619 0.00 0.00 0.00 3.01
5008 12759 5.026121 TCTTATCTTCTCCTTGGCTCAGAA 58.974 41.667 0.00 0.00 0.00 3.02
5009 12760 4.404073 GTCTTATCTTCTCCTTGGCTCAGA 59.596 45.833 0.00 0.00 0.00 3.27
5010 12761 4.405358 AGTCTTATCTTCTCCTTGGCTCAG 59.595 45.833 0.00 0.00 0.00 3.35
5011 12762 4.357325 AGTCTTATCTTCTCCTTGGCTCA 58.643 43.478 0.00 0.00 0.00 4.26
5012 12763 6.097696 ACTTAGTCTTATCTTCTCCTTGGCTC 59.902 42.308 0.00 0.00 0.00 4.70
5013 12764 5.961421 ACTTAGTCTTATCTTCTCCTTGGCT 59.039 40.000 0.00 0.00 0.00 4.75
5014 12765 6.045955 CACTTAGTCTTATCTTCTCCTTGGC 58.954 44.000 0.00 0.00 0.00 4.52
5015 12766 6.407525 CCCACTTAGTCTTATCTTCTCCTTGG 60.408 46.154 0.00 0.00 0.00 3.61
5016 12767 6.578023 CCCACTTAGTCTTATCTTCTCCTTG 58.422 44.000 0.00 0.00 0.00 3.61
5017 12768 5.129650 GCCCACTTAGTCTTATCTTCTCCTT 59.870 44.000 0.00 0.00 0.00 3.36
5018 12769 4.651962 GCCCACTTAGTCTTATCTTCTCCT 59.348 45.833 0.00 0.00 0.00 3.69
5019 12770 4.406003 TGCCCACTTAGTCTTATCTTCTCC 59.594 45.833 0.00 0.00 0.00 3.71
5020 12771 5.599999 TGCCCACTTAGTCTTATCTTCTC 57.400 43.478 0.00 0.00 0.00 2.87
5021 12772 5.663106 TCATGCCCACTTAGTCTTATCTTCT 59.337 40.000 0.00 0.00 0.00 2.85
5022 12773 5.918608 TCATGCCCACTTAGTCTTATCTTC 58.081 41.667 0.00 0.00 0.00 2.87
5023 12774 5.957771 TCATGCCCACTTAGTCTTATCTT 57.042 39.130 0.00 0.00 0.00 2.40
5024 12775 5.663106 TCTTCATGCCCACTTAGTCTTATCT 59.337 40.000 0.00 0.00 0.00 1.98
5025 12776 5.918608 TCTTCATGCCCACTTAGTCTTATC 58.081 41.667 0.00 0.00 0.00 1.75
5026 12777 5.957771 TCTTCATGCCCACTTAGTCTTAT 57.042 39.130 0.00 0.00 0.00 1.73
5027 12778 5.755409 TTCTTCATGCCCACTTAGTCTTA 57.245 39.130 0.00 0.00 0.00 2.10
5028 12779 4.640771 TTCTTCATGCCCACTTAGTCTT 57.359 40.909 0.00 0.00 0.00 3.01
5029 12780 4.287067 TCTTTCTTCATGCCCACTTAGTCT 59.713 41.667 0.00 0.00 0.00 3.24
5030 12781 4.393371 GTCTTTCTTCATGCCCACTTAGTC 59.607 45.833 0.00 0.00 0.00 2.59
5031 12782 4.202461 TGTCTTTCTTCATGCCCACTTAGT 60.202 41.667 0.00 0.00 0.00 2.24
5032 12783 4.154918 GTGTCTTTCTTCATGCCCACTTAG 59.845 45.833 0.00 0.00 0.00 2.18
5033 12784 4.072131 GTGTCTTTCTTCATGCCCACTTA 58.928 43.478 0.00 0.00 0.00 2.24
5034 12785 2.887152 GTGTCTTTCTTCATGCCCACTT 59.113 45.455 0.00 0.00 0.00 3.16
5035 12786 2.508526 GTGTCTTTCTTCATGCCCACT 58.491 47.619 0.00 0.00 0.00 4.00
5036 12787 1.197721 CGTGTCTTTCTTCATGCCCAC 59.802 52.381 0.00 0.00 0.00 4.61
5037 12788 1.202758 ACGTGTCTTTCTTCATGCCCA 60.203 47.619 0.00 0.00 0.00 5.36
5038 12789 1.197721 CACGTGTCTTTCTTCATGCCC 59.802 52.381 7.58 0.00 0.00 5.36
5039 12790 1.197721 CCACGTGTCTTTCTTCATGCC 59.802 52.381 15.65 0.00 0.00 4.40
5040 12791 1.400242 GCCACGTGTCTTTCTTCATGC 60.400 52.381 15.65 1.88 0.00 4.06
5041 12792 1.872952 TGCCACGTGTCTTTCTTCATG 59.127 47.619 15.65 0.00 0.00 3.07
5042 12793 2.254546 TGCCACGTGTCTTTCTTCAT 57.745 45.000 15.65 0.00 0.00 2.57
5043 12794 2.031258 TTGCCACGTGTCTTTCTTCA 57.969 45.000 15.65 0.00 0.00 3.02
5044 12795 3.300009 CAATTGCCACGTGTCTTTCTTC 58.700 45.455 15.65 0.00 0.00 2.87
5045 12796 2.034558 CCAATTGCCACGTGTCTTTCTT 59.965 45.455 15.65 0.00 0.00 2.52
5046 12797 1.608590 CCAATTGCCACGTGTCTTTCT 59.391 47.619 15.65 0.00 0.00 2.52
5047 12798 1.606668 TCCAATTGCCACGTGTCTTTC 59.393 47.619 15.65 0.00 0.00 2.62
5048 12799 1.608590 CTCCAATTGCCACGTGTCTTT 59.391 47.619 15.65 0.00 0.00 2.52
5049 12800 1.238439 CTCCAATTGCCACGTGTCTT 58.762 50.000 15.65 0.00 0.00 3.01
5050 12801 1.237285 GCTCCAATTGCCACGTGTCT 61.237 55.000 15.65 0.00 0.00 3.41
5051 12802 1.210155 GCTCCAATTGCCACGTGTC 59.790 57.895 15.65 0.98 0.00 3.67
5052 12803 1.518056 CTGCTCCAATTGCCACGTGT 61.518 55.000 15.65 0.00 0.00 4.49
5053 12804 1.210931 CTGCTCCAATTGCCACGTG 59.789 57.895 9.08 9.08 0.00 4.49
5054 12805 1.973281 CCTGCTCCAATTGCCACGT 60.973 57.895 0.00 0.00 0.00 4.49
5055 12806 2.879907 CCTGCTCCAATTGCCACG 59.120 61.111 0.00 0.00 0.00 4.94
5056 12807 2.575461 GCCTGCTCCAATTGCCAC 59.425 61.111 0.00 0.00 0.00 5.01
5057 12808 3.063704 CGCCTGCTCCAATTGCCA 61.064 61.111 0.00 0.00 0.00 4.92
5058 12809 3.830192 CCGCCTGCTCCAATTGCC 61.830 66.667 0.00 0.00 0.00 4.52
5059 12810 3.064324 ACCGCCTGCTCCAATTGC 61.064 61.111 0.00 0.00 0.00 3.56
5060 12811 2.703798 CCACCGCCTGCTCCAATTG 61.704 63.158 0.00 0.00 0.00 2.32
5061 12812 2.215451 ATCCACCGCCTGCTCCAATT 62.215 55.000 0.00 0.00 0.00 2.32
5062 12813 2.683465 ATCCACCGCCTGCTCCAAT 61.683 57.895 0.00 0.00 0.00 3.16
5063 12814 3.329889 ATCCACCGCCTGCTCCAA 61.330 61.111 0.00 0.00 0.00 3.53
5064 12815 4.100084 CATCCACCGCCTGCTCCA 62.100 66.667 0.00 0.00 0.00 3.86
5090 12841 1.508632 AATAATCAACCGGCGGATCG 58.491 50.000 35.78 19.76 0.00 3.69
5091 12842 3.000727 CCTAATAATCAACCGGCGGATC 58.999 50.000 35.78 0.00 0.00 3.36
5092 12843 2.635915 TCCTAATAATCAACCGGCGGAT 59.364 45.455 35.78 20.37 0.00 4.18
5093 12844 2.040939 TCCTAATAATCAACCGGCGGA 58.959 47.619 35.78 11.41 0.00 5.54
5094 12845 2.536761 TCCTAATAATCAACCGGCGG 57.463 50.000 27.06 27.06 0.00 6.13
5095 12846 4.083484 GGAAATCCTAATAATCAACCGGCG 60.083 45.833 0.00 0.00 0.00 6.46
5096 12847 4.217767 GGGAAATCCTAATAATCAACCGGC 59.782 45.833 0.00 0.00 35.95 6.13
5097 12848 4.765339 GGGGAAATCCTAATAATCAACCGG 59.235 45.833 0.00 0.00 35.95 5.28
5098 12849 4.765339 GGGGGAAATCCTAATAATCAACCG 59.235 45.833 0.00 0.00 35.95 4.44
5118 12869 5.685728 TGTTATTTTGGTTTTCTTTGGGGG 58.314 37.500 0.00 0.00 0.00 5.40
5119 12870 7.631717 TTTGTTATTTTGGTTTTCTTTGGGG 57.368 32.000 0.00 0.00 0.00 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.