Multiple sequence alignment - TraesCS3D01G334500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G334500 chr3D 100.000 5622 0 0 1 5622 446487684 446493305 0.000000e+00 10382
1 TraesCS3D01G334500 chr3D 88.226 1223 90 7 2565 3768 446760393 446761580 0.000000e+00 1411
2 TraesCS3D01G334500 chr3D 91.818 220 17 1 5362 5580 608535981 608536200 7.080000e-79 305
3 TraesCS3D01G334500 chr3A 90.685 3886 163 78 305 4061 588436442 588440257 0.000000e+00 4987
4 TraesCS3D01G334500 chr3A 95.358 797 31 3 4155 4948 588440283 588441076 0.000000e+00 1262
5 TraesCS3D01G334500 chr3A 93.702 524 32 1 2565 3088 588627725 588628247 0.000000e+00 784
6 TraesCS3D01G334500 chr3A 84.488 664 67 12 3105 3768 588630541 588631168 1.720000e-174 623
7 TraesCS3D01G334500 chr3A 92.949 312 12 3 1 310 588436113 588436416 4.000000e-121 446
8 TraesCS3D01G334500 chr3A 92.340 235 16 2 5348 5580 455035983 455036217 3.250000e-87 333
9 TraesCS3D01G334500 chr3A 97.531 81 2 0 4960 5040 588441062 588441142 7.590000e-29 139
10 TraesCS3D01G334500 chr3A 100.000 40 0 0 5107 5146 588441198 588441237 2.170000e-09 75
11 TraesCS3D01G334500 chr3B 95.142 2882 103 17 2018 4868 585830400 585833275 0.000000e+00 4512
12 TraesCS3D01G334500 chr3B 85.842 1674 96 48 442 2019 585828736 585830364 0.000000e+00 1648
13 TraesCS3D01G334500 chr3B 88.000 825 72 16 3880 4699 586049135 586049937 0.000000e+00 950
14 TraesCS3D01G334500 chr3B 92.488 426 28 3 2317 2741 585848176 585848598 1.730000e-169 606
15 TraesCS3D01G334500 chr3B 85.397 315 41 2 3559 3873 585976644 585976953 7.030000e-84 322
16 TraesCS3D01G334500 chr3B 83.249 394 12 16 87 454 585828352 585828717 4.230000e-81 313
17 TraesCS3D01G334500 chr3B 91.346 208 17 1 2018 2225 585843222 585843428 3.320000e-72 283
18 TraesCS3D01G334500 chr2D 93.750 240 14 1 5340 5579 570985279 570985041 5.360000e-95 359
19 TraesCS3D01G334500 chr7D 93.361 241 16 0 5340 5580 181974588 181974828 1.930000e-94 357
20 TraesCS3D01G334500 chr4D 88.112 286 20 2 5340 5614 29642607 29642889 1.510000e-85 327
21 TraesCS3D01G334500 chr6D 86.254 291 25 5 5340 5619 263993308 263993022 9.150000e-78 302
22 TraesCS3D01G334500 chr5B 93.717 191 12 0 5340 5530 512205825 512206015 2.560000e-73 287
23 TraesCS3D01G334500 chr7B 92.746 193 14 0 5388 5580 667793929 667793737 4.290000e-71 279
24 TraesCS3D01G334500 chr2A 87.866 239 25 2 5342 5580 708301918 708302152 1.540000e-70 278


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G334500 chr3D 446487684 446493305 5621 False 10382.000000 10382 100.000000 1 5622 1 chr3D.!!$F1 5621
1 TraesCS3D01G334500 chr3D 446760393 446761580 1187 False 1411.000000 1411 88.226000 2565 3768 1 chr3D.!!$F2 1203
2 TraesCS3D01G334500 chr3A 588436113 588441237 5124 False 1381.800000 4987 95.304600 1 5146 5 chr3A.!!$F2 5145
3 TraesCS3D01G334500 chr3A 588627725 588631168 3443 False 703.500000 784 89.095000 2565 3768 2 chr3A.!!$F3 1203
4 TraesCS3D01G334500 chr3B 585828352 585833275 4923 False 2157.666667 4512 88.077667 87 4868 3 chr3B.!!$F5 4781
5 TraesCS3D01G334500 chr3B 586049135 586049937 802 False 950.000000 950 88.000000 3880 4699 1 chr3B.!!$F4 819

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
794 900 0.033228 GGCCATCCAGATCTGAGTCG 59.967 60.0 24.62 7.33 0.00 4.18 F
1192 1362 0.028505 GTGCCGAGCTGCAACATATG 59.971 55.0 1.02 0.00 44.11 1.78 F
1629 1807 0.694771 TGAAGGCTCATGGAACTGCT 59.305 50.0 0.00 0.00 0.00 4.24 F
2524 2777 0.959553 ATGGACCGCTACGAGGTATG 59.040 55.0 0.00 0.00 43.01 2.39 F
3850 6387 0.893270 TGACATCCTTGGTTTGCCCG 60.893 55.0 0.00 0.00 35.15 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1779 1985 0.890996 CCAGTTGAAGTCAGGTGCCC 60.891 60.000 0.00 0.0 0.00 5.36 R
3172 5705 2.500098 TGGGAGTATGCTAACCTGACAC 59.500 50.000 5.77 0.0 0.00 3.67 R
3461 5998 4.238761 TCGCAATTACGAGAATAGAGGG 57.761 45.455 0.00 0.0 37.09 4.30 R
4351 6888 0.792640 CACTTACTGGCTGAAGCGTG 59.207 55.000 0.00 0.0 43.26 5.34 R
5061 7603 0.033601 TTGGAGTTTGGTGCCTGTGT 60.034 50.000 0.00 0.0 0.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 7.595819 TGGATTCAAAAACTTGTCCTGTAAT 57.404 32.000 0.00 0.00 0.00 1.89
36 37 8.698973 TGGATTCAAAAACTTGTCCTGTAATA 57.301 30.769 0.00 0.00 0.00 0.98
37 38 9.137459 TGGATTCAAAAACTTGTCCTGTAATAA 57.863 29.630 0.00 0.00 0.00 1.40
139 140 1.591619 GGTCGGCTATTAGCACGAAAC 59.408 52.381 22.28 16.87 44.75 2.78
140 141 1.254570 GTCGGCTATTAGCACGAAACG 59.745 52.381 22.28 14.04 44.75 3.60
141 142 1.132834 TCGGCTATTAGCACGAAACGA 59.867 47.619 19.90 14.32 44.75 3.85
142 143 1.921887 CGGCTATTAGCACGAAACGAA 59.078 47.619 17.11 0.00 44.75 3.85
143 144 2.346244 CGGCTATTAGCACGAAACGAAA 59.654 45.455 17.11 0.00 44.75 3.46
179 182 2.038387 CCCCCTGGAGAAACAATACG 57.962 55.000 0.00 0.00 0.00 3.06
207 210 7.793927 AAATAAAACATTCCTTTTTGCGGAA 57.206 28.000 0.00 0.00 44.08 4.30
278 281 1.141053 AGAATATCCAACTCACGGCCC 59.859 52.381 0.00 0.00 0.00 5.80
280 283 0.694444 ATATCCAACTCACGGCCCCT 60.694 55.000 0.00 0.00 0.00 4.79
370 410 1.591703 GACAGCCACATGTCTCCGA 59.408 57.895 0.00 0.00 45.03 4.55
432 472 3.057526 GCAATATAAAACTGGCGGATCCC 60.058 47.826 6.06 0.00 0.00 3.85
433 473 4.141287 CAATATAAAACTGGCGGATCCCA 58.859 43.478 6.06 0.00 0.00 4.37
434 474 4.657814 ATATAAAACTGGCGGATCCCAT 57.342 40.909 6.06 0.00 33.64 4.00
435 475 2.341846 TAAAACTGGCGGATCCCATC 57.658 50.000 6.06 0.00 33.64 3.51
436 476 0.748005 AAAACTGGCGGATCCCATCG 60.748 55.000 6.06 0.00 33.64 3.84
454 511 1.094785 CGTACCAAATCAGGCCAAGG 58.905 55.000 5.01 0.00 0.00 3.61
467 555 1.248101 GCCAAGGCACCGGTAACATT 61.248 55.000 6.87 3.36 41.49 2.71
470 558 0.402504 AAGGCACCGGTAACATTCCA 59.597 50.000 6.87 0.00 0.00 3.53
649 753 3.066760 CGCTCTCCCAAAAGTTCTTGTTT 59.933 43.478 0.00 0.00 0.00 2.83
711 817 2.510918 TCGATCTCGACGACGCCT 60.511 61.111 1.48 0.00 44.22 5.52
785 891 2.142761 CCAGATCCGGCCATCCAGA 61.143 63.158 2.24 0.00 0.00 3.86
789 895 0.036577 GATCCGGCCATCCAGATCTG 60.037 60.000 16.24 16.24 41.18 2.90
791 897 1.117749 TCCGGCCATCCAGATCTGAG 61.118 60.000 24.62 13.85 0.00 3.35
794 900 0.033228 GGCCATCCAGATCTGAGTCG 59.967 60.000 24.62 7.33 0.00 4.18
797 903 2.027385 CCATCCAGATCTGAGTCGTCA 58.973 52.381 24.62 0.00 0.00 4.35
799 905 3.069300 CCATCCAGATCTGAGTCGTCAAT 59.931 47.826 24.62 0.47 30.14 2.57
802 908 3.763897 TCCAGATCTGAGTCGTCAATTCA 59.236 43.478 24.62 0.00 30.14 2.57
803 909 4.220602 TCCAGATCTGAGTCGTCAATTCAA 59.779 41.667 24.62 0.00 30.14 2.69
806 912 6.073058 CCAGATCTGAGTCGTCAATTCAAAAA 60.073 38.462 24.62 0.00 30.14 1.94
807 913 7.014115 CAGATCTGAGTCGTCAATTCAAAAAG 58.986 38.462 18.34 0.00 30.14 2.27
811 921 5.577835 TGAGTCGTCAATTCAAAAAGTTGG 58.422 37.500 0.00 0.00 35.29 3.77
815 925 6.263168 AGTCGTCAATTCAAAAAGTTGGAGAT 59.737 34.615 0.00 0.00 35.29 2.75
818 928 8.792633 TCGTCAATTCAAAAAGTTGGAGATAAT 58.207 29.630 0.00 0.00 35.29 1.28
825 935 9.733556 TTCAAAAAGTTGGAGATAATAGCAGTA 57.266 29.630 0.00 0.00 35.29 2.74
842 952 5.869350 AGCAGTATTTGTCGTTTGATTAGC 58.131 37.500 0.00 0.00 0.00 3.09
844 954 5.960105 GCAGTATTTGTCGTTTGATTAGCTC 59.040 40.000 0.00 0.00 0.00 4.09
848 959 8.251721 AGTATTTGTCGTTTGATTAGCTCTAGT 58.748 33.333 0.00 0.00 0.00 2.57
859 970 5.720041 TGATTAGCTCTAGTGGGTTGTTACT 59.280 40.000 0.00 0.00 0.00 2.24
870 1002 5.180680 AGTGGGTTGTTACTCTTTAATTCGC 59.819 40.000 0.00 0.00 0.00 4.70
882 1014 6.038271 ACTCTTTAATTCGCGCTAATGGAATT 59.962 34.615 19.38 19.38 41.69 2.17
888 1020 3.951306 TCGCGCTAATGGAATTGATTTG 58.049 40.909 5.56 0.00 36.99 2.32
926 1058 1.571919 GATCTGGTGATTTAGCGCGT 58.428 50.000 8.43 0.00 32.19 6.01
935 1072 4.260620 GGTGATTTAGCGCGTGTTAATGAT 60.261 41.667 8.43 0.00 0.00 2.45
1186 1356 4.254709 ACCTGTGCCGAGCTGCAA 62.255 61.111 1.02 0.00 44.11 4.08
1187 1357 3.730761 CCTGTGCCGAGCTGCAAC 61.731 66.667 1.02 0.00 44.11 4.17
1188 1358 2.974148 CTGTGCCGAGCTGCAACA 60.974 61.111 1.02 1.58 44.11 3.33
1189 1359 2.281692 TGTGCCGAGCTGCAACAT 60.282 55.556 1.02 0.00 44.11 2.71
1190 1360 1.003959 TGTGCCGAGCTGCAACATA 60.004 52.632 1.02 0.00 44.11 2.29
1191 1361 0.392863 TGTGCCGAGCTGCAACATAT 60.393 50.000 1.02 0.00 44.11 1.78
1192 1362 0.028505 GTGCCGAGCTGCAACATATG 59.971 55.000 1.02 0.00 44.11 1.78
1249 1422 1.070601 GGTTGCCTGCATCCTTTTGTT 59.929 47.619 11.17 0.00 34.04 2.83
1401 1578 5.980715 TCAATATTGCGCAATCGTAACTAGA 59.019 36.000 36.99 18.06 42.66 2.43
1403 1580 2.933495 TGCGCAATCGTAACTAGAGT 57.067 45.000 8.16 0.00 38.14 3.24
1404 1581 2.793933 TGCGCAATCGTAACTAGAGTC 58.206 47.619 8.16 0.00 38.14 3.36
1405 1582 2.162809 TGCGCAATCGTAACTAGAGTCA 59.837 45.455 8.16 0.00 38.14 3.41
1407 1584 3.240861 GCGCAATCGTAACTAGAGTCAAG 59.759 47.826 0.30 0.00 38.14 3.02
1408 1585 3.240861 CGCAATCGTAACTAGAGTCAAGC 59.759 47.826 0.00 0.00 0.00 4.01
1409 1586 4.174009 GCAATCGTAACTAGAGTCAAGCA 58.826 43.478 0.00 0.00 0.00 3.91
1410 1587 4.625742 GCAATCGTAACTAGAGTCAAGCAA 59.374 41.667 0.00 0.00 0.00 3.91
1411 1588 5.292101 GCAATCGTAACTAGAGTCAAGCAAT 59.708 40.000 0.00 0.00 0.00 3.56
1412 1589 6.508721 GCAATCGTAACTAGAGTCAAGCAATC 60.509 42.308 0.00 0.00 0.00 2.67
1413 1590 4.659088 TCGTAACTAGAGTCAAGCAATCG 58.341 43.478 0.00 0.00 0.00 3.34
1414 1591 4.155462 TCGTAACTAGAGTCAAGCAATCGT 59.845 41.667 0.00 0.00 0.00 3.73
1415 1592 5.352293 TCGTAACTAGAGTCAAGCAATCGTA 59.648 40.000 0.00 0.00 0.00 3.43
1416 1593 6.025896 CGTAACTAGAGTCAAGCAATCGTAA 58.974 40.000 0.00 0.00 0.00 3.18
1417 1594 6.021626 CGTAACTAGAGTCAAGCAATCGTAAC 60.022 42.308 0.00 0.00 0.00 2.50
1418 1595 5.646577 ACTAGAGTCAAGCAATCGTAACT 57.353 39.130 0.00 0.00 0.00 2.24
1419 1596 5.642686 ACTAGAGTCAAGCAATCGTAACTC 58.357 41.667 0.00 0.00 34.69 3.01
1420 1597 3.502920 AGAGTCAAGCAATCGTAACTCG 58.497 45.455 0.00 0.00 38.48 4.18
1547 1725 9.757227 TGCTAAATTTTTACAGCATAACTTTGT 57.243 25.926 8.89 0.00 0.00 2.83
1629 1807 0.694771 TGAAGGCTCATGGAACTGCT 59.305 50.000 0.00 0.00 0.00 4.24
1717 1895 4.703897 CCGAATCTTTGCTCAAGGGTATA 58.296 43.478 0.00 0.00 32.64 1.47
1774 1980 6.988522 TGTTGCAAGTTCTGATACAGTAGTA 58.011 36.000 0.00 0.00 32.61 1.82
1779 1985 8.988934 TGCAAGTTCTGATACAGTAGTAAAAAG 58.011 33.333 0.00 0.00 33.13 2.27
1838 2045 8.049117 TCAATATGGTCTTCTAGTTTTGCATCT 58.951 33.333 0.00 0.00 0.00 2.90
2221 2473 1.545651 GGCTAGACCAAGTGCAGGTTT 60.546 52.381 0.00 0.00 40.09 3.27
2245 2497 5.039333 GCTAAGCAATCATTGTGATGAACC 58.961 41.667 0.00 0.00 44.96 3.62
2251 2503 4.531357 ATCATTGTGATGAACCCCAGAT 57.469 40.909 0.00 0.00 44.96 2.90
2252 2504 5.651612 ATCATTGTGATGAACCCCAGATA 57.348 39.130 0.00 0.00 44.96 1.98
2256 2508 5.449297 TTGTGATGAACCCCAGATATTGA 57.551 39.130 0.00 0.00 0.00 2.57
2414 2667 2.890945 GGATGGCAGTAGTGTTGGTTTT 59.109 45.455 0.00 0.00 0.00 2.43
2524 2777 0.959553 ATGGACCGCTACGAGGTATG 59.040 55.000 0.00 0.00 43.01 2.39
2574 2829 8.647226 GTGAGGTGCAATTTTGTGTTATATTTC 58.353 33.333 0.00 0.00 0.00 2.17
2766 3021 2.961062 GGCCAATGATCAGTATTTGCCT 59.039 45.455 12.98 0.00 40.97 4.75
2778 3033 4.463891 CAGTATTTGCCTCCCTTTGTGATT 59.536 41.667 0.00 0.00 0.00 2.57
2826 3081 4.073549 GTCCTATAGTAGACGGTGATGCT 58.926 47.826 0.00 0.00 0.00 3.79
3097 5610 5.596836 TCCATTCTATTTGTTCCAATGCC 57.403 39.130 0.00 0.00 0.00 4.40
3144 5676 6.127338 CCTGGTCATTAGTTAGTCATGACTCA 60.127 42.308 31.09 18.67 44.25 3.41
3255 5789 9.098355 GTGAATACACAAGTCAGATGCTTATTA 57.902 33.333 0.00 0.00 45.32 0.98
3453 5990 4.666512 AGGCCATTCAGTGTTTATTGACT 58.333 39.130 5.01 0.00 0.00 3.41
3457 5994 5.858581 GCCATTCAGTGTTTATTGACTTGAC 59.141 40.000 0.00 0.00 0.00 3.18
3458 5995 6.514870 GCCATTCAGTGTTTATTGACTTGACA 60.515 38.462 0.00 0.00 0.00 3.58
3461 5998 9.121517 CATTCAGTGTTTATTGACTTGACAATC 57.878 33.333 0.00 0.00 40.36 2.67
3464 6001 6.207417 CAGTGTTTATTGACTTGACAATCCCT 59.793 38.462 0.00 0.00 40.36 4.20
3500 6037 6.827586 TTGCGAGGGAGTTATTATTTTTGT 57.172 33.333 0.00 0.00 0.00 2.83
3536 6073 8.795842 TTCAGTTGTTTTGAGGTCTAAAGTTA 57.204 30.769 0.00 0.00 0.00 2.24
3537 6074 8.974060 TCAGTTGTTTTGAGGTCTAAAGTTAT 57.026 30.769 0.00 0.00 0.00 1.89
3549 6086 9.257651 GAGGTCTAAAGTTATTTATGTGCGTAT 57.742 33.333 0.00 0.00 30.61 3.06
3587 6124 9.926158 ATGTTTCTGCACATTTGTATTTATGAA 57.074 25.926 0.00 0.00 33.29 2.57
3850 6387 0.893270 TGACATCCTTGGTTTGCCCG 60.893 55.000 0.00 0.00 35.15 6.13
3852 6389 3.061848 ATCCTTGGTTTGCCCGCG 61.062 61.111 0.00 0.00 35.15 6.46
3873 6410 8.291032 CCCGCGGAAATTTACATAACATATTAA 58.709 33.333 30.73 0.00 0.00 1.40
4001 6538 7.556275 TCAAGGTGAGAACAAACAAGAAACTAT 59.444 33.333 0.00 0.00 0.00 2.12
4003 6540 7.054124 AGGTGAGAACAAACAAGAAACTATGA 58.946 34.615 0.00 0.00 0.00 2.15
4062 6599 5.076182 TCCTGAAAGTTGAAATGGTGCATA 58.924 37.500 0.00 0.00 0.00 3.14
4090 6627 5.684850 TGAAATTACACATGTTAGCACACG 58.315 37.500 0.00 0.00 35.03 4.49
4097 6634 2.946329 ACATGTTAGCACACGGTTTCAA 59.054 40.909 0.00 0.00 35.03 2.69
4144 6681 1.837439 TCTGGGACACACAGTTTCACT 59.163 47.619 0.00 0.00 37.25 3.41
4351 6888 3.059325 GCATCCAGATTCTTACATCGCAC 60.059 47.826 0.00 0.00 0.00 5.34
4380 6917 0.813184 CCAGTAAGTGCAATGGCCTG 59.187 55.000 3.32 0.00 40.13 4.85
4442 6979 2.136298 TCACTTGGTTTTGACCTGCA 57.864 45.000 0.00 0.00 0.00 4.41
4449 6986 4.314740 TGGTTTTGACCTGCATGTAAAC 57.685 40.909 10.39 10.39 0.00 2.01
4564 7102 0.253044 CCACCGTGATGAACCTCCAT 59.747 55.000 0.00 0.00 0.00 3.41
4610 7148 0.809385 GACGACCCTCATCGAAGTCA 59.191 55.000 1.63 0.00 45.13 3.41
4660 7198 2.334838 CTCTGAAGCCAAAATTGCTGC 58.665 47.619 0.00 0.00 39.48 5.25
4665 7204 2.385091 GCCAAAATTGCTGCAGCCG 61.385 57.895 34.64 15.78 41.18 5.52
4731 7270 8.002107 CGCATCATTGAATAATTTGAGATTTGC 58.998 33.333 0.00 0.00 0.00 3.68
4754 7293 1.629013 CACGCTTGCTCGAACTCATA 58.371 50.000 0.00 0.00 0.00 2.15
4823 7365 2.179377 ATTTGGGGTATTGCCATGCT 57.821 45.000 0.00 0.00 39.65 3.79
4837 7379 2.354003 GCCATGCTGGTTTGCTTAACAT 60.354 45.455 4.45 0.00 40.46 2.71
4898 7440 0.108804 TCTTCAGCTAAACGCCCGAG 60.109 55.000 0.00 0.00 40.39 4.63
4909 7451 2.293627 CGCCCGAGAATAGCGTTCG 61.294 63.158 0.00 0.00 44.65 3.95
4940 7482 5.208463 CTCTCCCTTGAGCCTAAATAGTC 57.792 47.826 0.00 0.00 38.58 2.59
4941 7483 3.967987 TCTCCCTTGAGCCTAAATAGTCC 59.032 47.826 0.00 0.00 38.58 3.85
4942 7484 3.046374 TCCCTTGAGCCTAAATAGTCCC 58.954 50.000 0.00 0.00 0.00 4.46
4943 7485 2.106684 CCCTTGAGCCTAAATAGTCCCC 59.893 54.545 0.00 0.00 0.00 4.81
4944 7486 3.049344 CCTTGAGCCTAAATAGTCCCCT 58.951 50.000 0.00 0.00 0.00 4.79
4945 7487 3.459969 CCTTGAGCCTAAATAGTCCCCTT 59.540 47.826 0.00 0.00 0.00 3.95
4946 7488 4.445019 CCTTGAGCCTAAATAGTCCCCTTC 60.445 50.000 0.00 0.00 0.00 3.46
4947 7489 3.046374 TGAGCCTAAATAGTCCCCTTCC 58.954 50.000 0.00 0.00 0.00 3.46
4948 7490 2.037381 GAGCCTAAATAGTCCCCTTCCG 59.963 54.545 0.00 0.00 0.00 4.30
4949 7491 1.767088 GCCTAAATAGTCCCCTTCCGT 59.233 52.381 0.00 0.00 0.00 4.69
4950 7492 2.172082 GCCTAAATAGTCCCCTTCCGTT 59.828 50.000 0.00 0.00 0.00 4.44
4951 7493 3.371273 GCCTAAATAGTCCCCTTCCGTTT 60.371 47.826 0.00 0.00 0.00 3.60
4952 7494 4.449131 CCTAAATAGTCCCCTTCCGTTTC 58.551 47.826 0.00 0.00 0.00 2.78
4953 7495 2.685850 AATAGTCCCCTTCCGTTTCG 57.314 50.000 0.00 0.00 0.00 3.46
4954 7496 1.856629 ATAGTCCCCTTCCGTTTCGA 58.143 50.000 0.00 0.00 0.00 3.71
4955 7497 1.631405 TAGTCCCCTTCCGTTTCGAA 58.369 50.000 0.00 0.00 0.00 3.71
4956 7498 0.760572 AGTCCCCTTCCGTTTCGAAA 59.239 50.000 6.47 6.47 0.00 3.46
4957 7499 1.141455 AGTCCCCTTCCGTTTCGAAAA 59.859 47.619 13.10 0.00 0.00 2.29
4958 7500 1.948834 GTCCCCTTCCGTTTCGAAAAA 59.051 47.619 13.10 2.65 0.00 1.94
4996 7538 0.611896 AGCAATGAAGGAAACGGGGG 60.612 55.000 0.00 0.00 0.00 5.40
5040 7582 2.299013 TGTAAGCCGTGACTGACAGAAT 59.701 45.455 10.08 0.00 0.00 2.40
5041 7583 3.508402 TGTAAGCCGTGACTGACAGAATA 59.492 43.478 10.08 0.00 0.00 1.75
5043 7585 1.134965 AGCCGTGACTGACAGAATAGC 60.135 52.381 10.08 5.39 0.00 2.97
5045 7587 2.675317 GCCGTGACTGACAGAATAGCTT 60.675 50.000 10.08 0.00 0.00 3.74
5046 7588 3.182967 CCGTGACTGACAGAATAGCTTC 58.817 50.000 10.08 0.00 0.00 3.86
5048 7590 2.600867 GTGACTGACAGAATAGCTTCGC 59.399 50.000 10.08 0.00 36.45 4.70
5049 7591 2.493675 TGACTGACAGAATAGCTTCGCT 59.506 45.455 10.08 0.00 43.41 4.93
5050 7592 3.694566 TGACTGACAGAATAGCTTCGCTA 59.305 43.478 10.08 0.00 45.55 4.26
5053 7595 4.882427 ACTGACAGAATAGCTTCGCTACTA 59.118 41.667 10.08 0.00 44.24 1.82
5054 7596 5.357314 ACTGACAGAATAGCTTCGCTACTAA 59.643 40.000 10.08 0.00 44.24 2.24
5055 7597 5.579718 TGACAGAATAGCTTCGCTACTAAC 58.420 41.667 0.00 0.00 44.24 2.34
5057 7599 5.962433 ACAGAATAGCTTCGCTACTAACAA 58.038 37.500 0.00 0.00 44.24 2.83
5058 7600 6.574350 ACAGAATAGCTTCGCTACTAACAAT 58.426 36.000 0.00 0.00 44.24 2.71
5059 7601 7.042335 ACAGAATAGCTTCGCTACTAACAATT 58.958 34.615 0.00 0.00 44.24 2.32
5060 7602 7.010552 ACAGAATAGCTTCGCTACTAACAATTG 59.989 37.037 3.24 3.24 44.24 2.32
5061 7603 7.222805 CAGAATAGCTTCGCTACTAACAATTGA 59.777 37.037 13.59 0.00 44.24 2.57
5063 7605 4.566004 AGCTTCGCTACTAACAATTGACA 58.434 39.130 13.59 0.00 36.99 3.58
5064 7606 4.389077 AGCTTCGCTACTAACAATTGACAC 59.611 41.667 13.59 0.00 36.99 3.67
5065 7607 4.151689 GCTTCGCTACTAACAATTGACACA 59.848 41.667 13.59 0.00 0.00 3.72
5066 7608 5.668866 GCTTCGCTACTAACAATTGACACAG 60.669 44.000 13.59 5.72 0.00 3.66
5067 7609 4.242475 TCGCTACTAACAATTGACACAGG 58.758 43.478 13.59 0.00 0.00 4.00
5068 7610 3.181520 CGCTACTAACAATTGACACAGGC 60.182 47.826 13.59 8.49 0.00 4.85
5069 7611 3.751175 GCTACTAACAATTGACACAGGCA 59.249 43.478 13.59 0.00 0.00 4.75
5083 7625 1.341976 ACAGGCACCAAACTCCAACTT 60.342 47.619 0.00 0.00 0.00 2.66
5084 7626 1.067516 CAGGCACCAAACTCCAACTTG 59.932 52.381 0.00 0.00 0.00 3.16
5085 7627 0.389025 GGCACCAAACTCCAACTTGG 59.611 55.000 0.74 0.74 46.36 3.61
5086 7628 0.389025 GCACCAAACTCCAACTTGGG 59.611 55.000 8.01 1.80 45.41 4.12
5087 7629 2.026905 GCACCAAACTCCAACTTGGGA 61.027 52.381 8.01 0.00 45.41 4.37
5088 7630 2.383855 CACCAAACTCCAACTTGGGAA 58.616 47.619 8.01 0.00 45.41 3.97
5090 7632 2.243736 ACCAAACTCCAACTTGGGAAGA 59.756 45.455 8.01 0.00 45.41 2.87
5091 7633 2.623416 CCAAACTCCAACTTGGGAAGAC 59.377 50.000 8.01 0.00 38.77 3.01
5092 7634 3.555966 CAAACTCCAACTTGGGAAGACT 58.444 45.455 8.01 0.00 38.32 3.24
5093 7635 4.445735 CCAAACTCCAACTTGGGAAGACTA 60.446 45.833 8.01 0.00 38.77 2.59
5094 7636 4.353383 AACTCCAACTTGGGAAGACTAC 57.647 45.455 8.01 0.00 38.32 2.73
5095 7637 2.299297 ACTCCAACTTGGGAAGACTACG 59.701 50.000 8.01 0.00 38.32 3.51
5096 7638 2.561419 CTCCAACTTGGGAAGACTACGA 59.439 50.000 8.01 0.00 38.32 3.43
5097 7639 3.170717 TCCAACTTGGGAAGACTACGAT 58.829 45.455 8.01 0.00 38.32 3.73
5098 7640 3.056107 TCCAACTTGGGAAGACTACGATG 60.056 47.826 8.01 0.00 38.32 3.84
5099 7641 3.306780 CCAACTTGGGAAGACTACGATGT 60.307 47.826 0.00 0.00 32.67 3.06
5100 7642 4.315803 CAACTTGGGAAGACTACGATGTT 58.684 43.478 0.00 0.00 0.00 2.71
5101 7643 3.926616 ACTTGGGAAGACTACGATGTTG 58.073 45.455 0.00 0.00 0.00 3.33
5102 7644 2.380084 TGGGAAGACTACGATGTTGC 57.620 50.000 0.00 0.00 0.00 4.17
5103 7645 1.066430 TGGGAAGACTACGATGTTGCC 60.066 52.381 0.00 0.00 0.00 4.52
5104 7646 1.278238 GGAAGACTACGATGTTGCCG 58.722 55.000 0.00 0.00 0.00 5.69
5105 7647 1.278238 GAAGACTACGATGTTGCCGG 58.722 55.000 0.00 0.00 0.00 6.13
5183 7725 2.880879 CGACGCGTGGACATGGAG 60.881 66.667 20.70 0.00 0.00 3.86
5184 7726 2.509336 GACGCGTGGACATGGAGG 60.509 66.667 20.70 0.00 0.00 4.30
5185 7727 4.082523 ACGCGTGGACATGGAGGG 62.083 66.667 12.93 0.00 0.00 4.30
5186 7728 4.838152 CGCGTGGACATGGAGGGG 62.838 72.222 0.00 0.00 0.00 4.79
5188 7730 4.838152 CGTGGACATGGAGGGGCG 62.838 72.222 0.00 0.00 0.00 6.13
5249 7791 4.838486 GAGGCGTGCGACGAGGAG 62.838 72.222 11.94 0.00 46.05 3.69
5386 7928 4.429212 CATGCGGTCACGACGGGA 62.429 66.667 0.00 0.00 44.60 5.14
5387 7929 4.129737 ATGCGGTCACGACGGGAG 62.130 66.667 0.00 0.00 44.60 4.30
5391 7933 4.477975 GGTCACGACGGGAGCGAG 62.478 72.222 14.22 0.00 34.41 5.03
5392 7934 4.477975 GTCACGACGGGAGCGAGG 62.478 72.222 0.00 0.00 34.41 4.63
5402 7944 4.819761 GAGCGAGGGCGTGCATGA 62.820 66.667 10.93 0.00 46.35 3.07
5403 7945 4.393155 AGCGAGGGCGTGCATGAA 62.393 61.111 10.93 0.00 46.35 2.57
5404 7946 4.166011 GCGAGGGCGTGCATGAAC 62.166 66.667 10.93 0.00 40.36 3.18
5405 7947 2.741985 CGAGGGCGTGCATGAACA 60.742 61.111 10.93 0.00 0.00 3.18
5406 7948 2.324330 CGAGGGCGTGCATGAACAA 61.324 57.895 10.93 0.00 0.00 2.83
5407 7949 1.503542 GAGGGCGTGCATGAACAAG 59.496 57.895 10.93 0.00 0.00 3.16
5408 7950 0.955428 GAGGGCGTGCATGAACAAGA 60.955 55.000 10.93 0.00 0.00 3.02
5409 7951 0.957395 AGGGCGTGCATGAACAAGAG 60.957 55.000 10.93 0.00 0.00 2.85
5410 7952 1.237285 GGGCGTGCATGAACAAGAGT 61.237 55.000 10.93 0.00 0.00 3.24
5411 7953 0.110056 GGCGTGCATGAACAAGAGTG 60.110 55.000 10.93 0.00 0.00 3.51
5412 7954 0.110056 GCGTGCATGAACAAGAGTGG 60.110 55.000 10.93 0.00 0.00 4.00
5413 7955 0.110056 CGTGCATGAACAAGAGTGGC 60.110 55.000 4.29 0.00 0.00 5.01
5414 7956 0.242017 GTGCATGAACAAGAGTGGCC 59.758 55.000 0.00 0.00 0.00 5.36
5415 7957 1.236616 TGCATGAACAAGAGTGGCCG 61.237 55.000 0.00 0.00 0.00 6.13
5416 7958 1.503542 CATGAACAAGAGTGGCCGC 59.496 57.895 8.71 8.71 0.00 6.53
5417 7959 2.034879 ATGAACAAGAGTGGCCGCG 61.035 57.895 11.42 0.00 0.00 6.46
5418 7960 3.423154 GAACAAGAGTGGCCGCGG 61.423 66.667 24.05 24.05 0.00 6.46
5442 7984 1.321743 CGTCAAGTTCGCTATGTCTGC 59.678 52.381 0.00 0.00 0.00 4.26
5443 7985 2.611518 GTCAAGTTCGCTATGTCTGCT 58.388 47.619 0.00 0.00 0.00 4.24
5444 7986 3.730963 CGTCAAGTTCGCTATGTCTGCTA 60.731 47.826 0.00 0.00 0.00 3.49
5445 7987 3.548268 GTCAAGTTCGCTATGTCTGCTAC 59.452 47.826 0.00 0.00 0.00 3.58
5446 7988 2.476873 AGTTCGCTATGTCTGCTACG 57.523 50.000 0.00 0.00 0.00 3.51
5447 7989 1.743958 AGTTCGCTATGTCTGCTACGT 59.256 47.619 0.00 0.00 0.00 3.57
5448 7990 1.846782 GTTCGCTATGTCTGCTACGTG 59.153 52.381 0.00 0.00 0.00 4.49
5449 7991 1.092348 TCGCTATGTCTGCTACGTGT 58.908 50.000 0.00 0.00 0.00 4.49
5450 7992 1.471287 TCGCTATGTCTGCTACGTGTT 59.529 47.619 0.00 0.00 0.00 3.32
5451 7993 1.846782 CGCTATGTCTGCTACGTGTTC 59.153 52.381 0.00 0.00 0.00 3.18
5452 7994 1.846782 GCTATGTCTGCTACGTGTTCG 59.153 52.381 0.00 0.00 43.34 3.95
5453 7995 2.477357 GCTATGTCTGCTACGTGTTCGA 60.477 50.000 0.00 0.00 40.62 3.71
5454 7996 2.717580 ATGTCTGCTACGTGTTCGAA 57.282 45.000 0.00 0.00 40.62 3.71
5455 7997 2.046283 TGTCTGCTACGTGTTCGAAG 57.954 50.000 0.00 0.00 40.62 3.79
5456 7998 1.605232 TGTCTGCTACGTGTTCGAAGA 59.395 47.619 0.00 0.00 40.62 2.87
5457 7999 2.033675 TGTCTGCTACGTGTTCGAAGAA 59.966 45.455 0.00 0.00 45.90 2.52
5458 8000 3.047796 GTCTGCTACGTGTTCGAAGAAA 58.952 45.455 0.00 0.00 45.90 2.52
5459 8001 3.673809 GTCTGCTACGTGTTCGAAGAAAT 59.326 43.478 0.00 0.00 45.90 2.17
5460 8002 3.673338 TCTGCTACGTGTTCGAAGAAATG 59.327 43.478 0.00 0.00 45.90 2.32
5461 8003 3.644823 TGCTACGTGTTCGAAGAAATGA 58.355 40.909 0.00 0.00 45.90 2.57
5462 8004 3.427528 TGCTACGTGTTCGAAGAAATGAC 59.572 43.478 0.00 0.00 45.90 3.06
5463 8005 3.479866 GCTACGTGTTCGAAGAAATGACG 60.480 47.826 0.00 0.00 45.90 4.35
5464 8006 2.734670 ACGTGTTCGAAGAAATGACGA 58.265 42.857 0.00 0.00 45.90 4.20
5465 8007 2.724690 ACGTGTTCGAAGAAATGACGAG 59.275 45.455 0.00 0.00 45.90 4.18
5466 8008 2.090658 CGTGTTCGAAGAAATGACGAGG 59.909 50.000 0.00 0.00 45.90 4.63
5467 8009 3.314553 GTGTTCGAAGAAATGACGAGGA 58.685 45.455 0.00 0.00 45.90 3.71
5468 8010 3.121445 GTGTTCGAAGAAATGACGAGGAC 59.879 47.826 0.00 0.00 45.90 3.85
5469 8011 2.257974 TCGAAGAAATGACGAGGACG 57.742 50.000 0.00 0.00 45.75 4.79
5470 8012 1.135489 TCGAAGAAATGACGAGGACGG 60.135 52.381 0.00 0.00 44.46 4.79
5471 8013 1.135489 CGAAGAAATGACGAGGACGGA 60.135 52.381 0.00 0.00 44.46 4.69
5472 8014 2.260481 GAAGAAATGACGAGGACGGAC 58.740 52.381 0.00 0.00 44.46 4.79
5473 8015 1.254026 AGAAATGACGAGGACGGACA 58.746 50.000 0.00 0.00 44.46 4.02
5474 8016 1.202582 AGAAATGACGAGGACGGACAG 59.797 52.381 0.00 0.00 44.46 3.51
5475 8017 0.389948 AAATGACGAGGACGGACAGC 60.390 55.000 0.00 0.00 44.46 4.40
5476 8018 1.251527 AATGACGAGGACGGACAGCT 61.252 55.000 0.00 0.00 44.46 4.24
5477 8019 1.938657 ATGACGAGGACGGACAGCTG 61.939 60.000 13.48 13.48 44.46 4.24
5478 8020 3.343788 GACGAGGACGGACAGCTGG 62.344 68.421 19.93 2.38 44.46 4.85
5479 8021 3.374402 CGAGGACGGACAGCTGGT 61.374 66.667 19.93 6.20 35.72 4.00
5480 8022 2.262915 GAGGACGGACAGCTGGTG 59.737 66.667 19.93 9.60 0.00 4.17
5481 8023 2.203640 AGGACGGACAGCTGGTGA 60.204 61.111 19.93 0.00 0.00 4.02
5482 8024 1.816863 GAGGACGGACAGCTGGTGAA 61.817 60.000 19.93 0.00 0.00 3.18
5483 8025 1.070786 GGACGGACAGCTGGTGAAA 59.929 57.895 19.93 0.00 0.00 2.69
5484 8026 0.321653 GGACGGACAGCTGGTGAAAT 60.322 55.000 19.93 0.00 0.00 2.17
5485 8027 0.798776 GACGGACAGCTGGTGAAATG 59.201 55.000 19.93 2.85 0.00 2.32
5486 8028 0.606401 ACGGACAGCTGGTGAAATGG 60.606 55.000 19.93 0.67 0.00 3.16
5487 8029 1.308069 CGGACAGCTGGTGAAATGGG 61.308 60.000 19.93 0.00 0.00 4.00
5488 8030 0.967380 GGACAGCTGGTGAAATGGGG 60.967 60.000 19.93 0.00 0.00 4.96
5489 8031 0.251341 GACAGCTGGTGAAATGGGGT 60.251 55.000 19.93 0.00 0.00 4.95
5490 8032 0.540365 ACAGCTGGTGAAATGGGGTG 60.540 55.000 19.93 0.00 0.00 4.61
5491 8033 0.251297 CAGCTGGTGAAATGGGGTGA 60.251 55.000 5.57 0.00 0.00 4.02
5492 8034 0.482446 AGCTGGTGAAATGGGGTGAA 59.518 50.000 0.00 0.00 0.00 3.18
5493 8035 1.133199 AGCTGGTGAAATGGGGTGAAA 60.133 47.619 0.00 0.00 0.00 2.69
5494 8036 1.691434 GCTGGTGAAATGGGGTGAAAA 59.309 47.619 0.00 0.00 0.00 2.29
5495 8037 2.302733 GCTGGTGAAATGGGGTGAAAAT 59.697 45.455 0.00 0.00 0.00 1.82
5496 8038 3.865684 GCTGGTGAAATGGGGTGAAAATG 60.866 47.826 0.00 0.00 0.00 2.32
5497 8039 2.636893 TGGTGAAATGGGGTGAAAATGG 59.363 45.455 0.00 0.00 0.00 3.16
5498 8040 2.027285 GGTGAAATGGGGTGAAAATGGG 60.027 50.000 0.00 0.00 0.00 4.00
5499 8041 2.027285 GTGAAATGGGGTGAAAATGGGG 60.027 50.000 0.00 0.00 0.00 4.96
5500 8042 2.265367 GAAATGGGGTGAAAATGGGGT 58.735 47.619 0.00 0.00 0.00 4.95
5501 8043 3.181406 TGAAATGGGGTGAAAATGGGGTA 60.181 43.478 0.00 0.00 0.00 3.69
5502 8044 2.846665 ATGGGGTGAAAATGGGGTAG 57.153 50.000 0.00 0.00 0.00 3.18
5503 8045 0.040499 TGGGGTGAAAATGGGGTAGC 59.960 55.000 0.00 0.00 0.00 3.58
5504 8046 0.040499 GGGGTGAAAATGGGGTAGCA 59.960 55.000 0.00 0.00 0.00 3.49
5505 8047 1.474330 GGGTGAAAATGGGGTAGCAG 58.526 55.000 0.00 0.00 0.00 4.24
5506 8048 0.817654 GGTGAAAATGGGGTAGCAGC 59.182 55.000 0.00 0.00 0.00 5.25
5507 8049 0.451783 GTGAAAATGGGGTAGCAGCG 59.548 55.000 0.00 0.00 0.00 5.18
5508 8050 0.037590 TGAAAATGGGGTAGCAGCGT 59.962 50.000 0.00 0.00 0.00 5.07
5509 8051 1.173913 GAAAATGGGGTAGCAGCGTT 58.826 50.000 0.00 0.00 0.00 4.84
5510 8052 0.887933 AAAATGGGGTAGCAGCGTTG 59.112 50.000 0.00 0.00 0.00 4.10
5511 8053 0.965363 AAATGGGGTAGCAGCGTTGG 60.965 55.000 0.16 0.00 0.00 3.77
5512 8054 2.837031 AATGGGGTAGCAGCGTTGGG 62.837 60.000 0.16 0.00 0.00 4.12
5513 8055 4.029809 GGGGTAGCAGCGTTGGGT 62.030 66.667 0.16 0.00 0.00 4.51
5514 8056 2.746277 GGGTAGCAGCGTTGGGTG 60.746 66.667 0.16 0.00 44.42 4.61
5515 8057 2.032071 GGTAGCAGCGTTGGGTGT 59.968 61.111 0.16 0.00 43.51 4.16
5516 8058 1.294138 GGTAGCAGCGTTGGGTGTA 59.706 57.895 0.16 0.00 43.51 2.90
5517 8059 0.739813 GGTAGCAGCGTTGGGTGTAG 60.740 60.000 0.16 0.00 43.51 2.74
5518 8060 1.079405 TAGCAGCGTTGGGTGTAGC 60.079 57.895 0.16 0.00 43.51 3.58
5519 8061 2.829043 TAGCAGCGTTGGGTGTAGCG 62.829 60.000 0.16 0.00 43.51 4.26
5520 8062 2.048597 CAGCGTTGGGTGTAGCGA 60.049 61.111 0.00 0.00 36.90 4.93
5521 8063 2.094659 CAGCGTTGGGTGTAGCGAG 61.095 63.158 0.00 0.00 36.90 5.03
5522 8064 2.048503 GCGTTGGGTGTAGCGAGT 60.049 61.111 0.00 0.00 0.00 4.18
5523 8065 1.666872 GCGTTGGGTGTAGCGAGTT 60.667 57.895 0.00 0.00 0.00 3.01
5524 8066 1.226030 GCGTTGGGTGTAGCGAGTTT 61.226 55.000 0.00 0.00 0.00 2.66
5525 8067 0.511221 CGTTGGGTGTAGCGAGTTTG 59.489 55.000 0.00 0.00 0.00 2.93
5526 8068 1.589803 GTTGGGTGTAGCGAGTTTGT 58.410 50.000 0.00 0.00 0.00 2.83
5527 8069 1.529865 GTTGGGTGTAGCGAGTTTGTC 59.470 52.381 0.00 0.00 0.00 3.18
5528 8070 0.034337 TGGGTGTAGCGAGTTTGTCC 59.966 55.000 0.00 0.00 0.00 4.02
5529 8071 1.012486 GGGTGTAGCGAGTTTGTCCG 61.012 60.000 0.00 0.00 0.00 4.79
5530 8072 0.038892 GGTGTAGCGAGTTTGTCCGA 60.039 55.000 0.00 0.00 0.00 4.55
5531 8073 1.058404 GTGTAGCGAGTTTGTCCGAC 58.942 55.000 0.00 0.00 0.00 4.79
5532 8074 0.038892 TGTAGCGAGTTTGTCCGACC 60.039 55.000 0.00 0.00 0.00 4.79
5533 8075 0.243095 GTAGCGAGTTTGTCCGACCT 59.757 55.000 0.00 0.00 0.00 3.85
5534 8076 0.524862 TAGCGAGTTTGTCCGACCTC 59.475 55.000 0.00 0.00 0.00 3.85
5535 8077 1.179814 AGCGAGTTTGTCCGACCTCT 61.180 55.000 0.00 0.00 0.00 3.69
5536 8078 1.009389 GCGAGTTTGTCCGACCTCTG 61.009 60.000 0.00 0.00 0.00 3.35
5537 8079 0.314302 CGAGTTTGTCCGACCTCTGT 59.686 55.000 0.00 0.00 0.00 3.41
5538 8080 1.666311 CGAGTTTGTCCGACCTCTGTC 60.666 57.143 0.00 0.00 38.18 3.51
5539 8081 0.680061 AGTTTGTCCGACCTCTGTCC 59.320 55.000 0.00 0.00 38.32 4.02
5540 8082 0.666577 GTTTGTCCGACCTCTGTCCG 60.667 60.000 0.00 0.00 38.32 4.79
5541 8083 1.812686 TTTGTCCGACCTCTGTCCGG 61.813 60.000 0.00 0.00 38.32 5.14
5542 8084 4.131088 GTCCGACCTCTGTCCGGC 62.131 72.222 0.00 0.00 38.32 6.13
5545 8087 4.052229 CGACCTCTGTCCGGCGTT 62.052 66.667 6.01 0.00 38.32 4.84
5546 8088 2.342648 GACCTCTGTCCGGCGTTT 59.657 61.111 6.01 0.00 35.34 3.60
5547 8089 2.027625 GACCTCTGTCCGGCGTTTG 61.028 63.158 6.01 0.00 35.34 2.93
5548 8090 2.030562 CCTCTGTCCGGCGTTTGT 59.969 61.111 6.01 0.00 0.00 2.83
5549 8091 1.597027 CCTCTGTCCGGCGTTTGTT 60.597 57.895 6.01 0.00 0.00 2.83
5550 8092 1.566018 CCTCTGTCCGGCGTTTGTTC 61.566 60.000 6.01 0.00 0.00 3.18
5551 8093 0.600255 CTCTGTCCGGCGTTTGTTCT 60.600 55.000 6.01 0.00 0.00 3.01
5552 8094 0.599204 TCTGTCCGGCGTTTGTTCTC 60.599 55.000 6.01 0.00 0.00 2.87
5553 8095 1.566018 CTGTCCGGCGTTTGTTCTCC 61.566 60.000 6.01 0.00 0.00 3.71
5554 8096 2.031465 TCCGGCGTTTGTTCTCCC 59.969 61.111 6.01 0.00 0.00 4.30
5555 8097 2.032071 CCGGCGTTTGTTCTCCCT 59.968 61.111 6.01 0.00 0.00 4.20
5556 8098 1.186917 TCCGGCGTTTGTTCTCCCTA 61.187 55.000 6.01 0.00 0.00 3.53
5557 8099 0.107848 CCGGCGTTTGTTCTCCCTAT 60.108 55.000 6.01 0.00 0.00 2.57
5558 8100 1.677820 CCGGCGTTTGTTCTCCCTATT 60.678 52.381 6.01 0.00 0.00 1.73
5559 8101 2.081462 CGGCGTTTGTTCTCCCTATTT 58.919 47.619 0.00 0.00 0.00 1.40
5560 8102 2.486592 CGGCGTTTGTTCTCCCTATTTT 59.513 45.455 0.00 0.00 0.00 1.82
5561 8103 3.057806 CGGCGTTTGTTCTCCCTATTTTT 60.058 43.478 0.00 0.00 0.00 1.94
5562 8104 4.154556 CGGCGTTTGTTCTCCCTATTTTTA 59.845 41.667 0.00 0.00 0.00 1.52
5563 8105 5.163693 CGGCGTTTGTTCTCCCTATTTTTAT 60.164 40.000 0.00 0.00 0.00 1.40
5564 8106 6.263344 GGCGTTTGTTCTCCCTATTTTTATC 58.737 40.000 0.00 0.00 0.00 1.75
5565 8107 6.095021 GGCGTTTGTTCTCCCTATTTTTATCT 59.905 38.462 0.00 0.00 0.00 1.98
5566 8108 7.187480 GCGTTTGTTCTCCCTATTTTTATCTC 58.813 38.462 0.00 0.00 0.00 2.75
5567 8109 7.148306 GCGTTTGTTCTCCCTATTTTTATCTCA 60.148 37.037 0.00 0.00 0.00 3.27
5568 8110 8.893727 CGTTTGTTCTCCCTATTTTTATCTCAT 58.106 33.333 0.00 0.00 0.00 2.90
5571 8113 9.542462 TTGTTCTCCCTATTTTTATCTCATACG 57.458 33.333 0.00 0.00 0.00 3.06
5572 8114 8.148351 TGTTCTCCCTATTTTTATCTCATACGG 58.852 37.037 0.00 0.00 0.00 4.02
5573 8115 8.365647 GTTCTCCCTATTTTTATCTCATACGGA 58.634 37.037 0.00 0.00 0.00 4.69
5574 8116 7.893658 TCTCCCTATTTTTATCTCATACGGAC 58.106 38.462 0.00 0.00 0.00 4.79
5575 8117 7.507956 TCTCCCTATTTTTATCTCATACGGACA 59.492 37.037 0.00 0.00 0.00 4.02
5576 8118 8.025270 TCCCTATTTTTATCTCATACGGACAA 57.975 34.615 0.00 0.00 0.00 3.18
5577 8119 8.487848 TCCCTATTTTTATCTCATACGGACAAA 58.512 33.333 0.00 0.00 0.00 2.83
5578 8120 9.116067 CCCTATTTTTATCTCATACGGACAAAA 57.884 33.333 0.00 0.00 0.00 2.44
5582 8124 6.935741 TTTATCTCATACGGACAAAATGGG 57.064 37.500 0.00 0.00 0.00 4.00
5583 8125 3.992943 TCTCATACGGACAAAATGGGT 57.007 42.857 0.00 0.00 0.00 4.51
5584 8126 5.623956 ATCTCATACGGACAAAATGGGTA 57.376 39.130 0.00 0.00 0.00 3.69
5585 8127 5.623956 TCTCATACGGACAAAATGGGTAT 57.376 39.130 0.00 0.00 0.00 2.73
5586 8128 6.734502 TCTCATACGGACAAAATGGGTATA 57.265 37.500 0.00 0.00 0.00 1.47
5587 8129 6.755206 TCTCATACGGACAAAATGGGTATAG 58.245 40.000 0.00 0.00 0.00 1.31
5588 8130 6.551975 TCTCATACGGACAAAATGGGTATAGA 59.448 38.462 0.00 0.00 0.00 1.98
5589 8131 7.234782 TCTCATACGGACAAAATGGGTATAGAT 59.765 37.037 0.00 0.00 0.00 1.98
5590 8132 7.741785 TCATACGGACAAAATGGGTATAGATT 58.258 34.615 0.00 0.00 0.00 2.40
5591 8133 8.215050 TCATACGGACAAAATGGGTATAGATTT 58.785 33.333 0.00 0.00 0.00 2.17
5592 8134 8.846211 CATACGGACAAAATGGGTATAGATTTT 58.154 33.333 0.00 0.00 33.07 1.82
5594 8136 6.096282 ACGGACAAAATGGGTATAGATTTTGG 59.904 38.462 19.24 10.48 46.73 3.28
5595 8137 6.460953 CGGACAAAATGGGTATAGATTTTGGG 60.461 42.308 19.24 10.51 46.73 4.12
5596 8138 6.382859 GGACAAAATGGGTATAGATTTTGGGT 59.617 38.462 19.24 7.68 46.73 4.51
5597 8139 7.093068 GGACAAAATGGGTATAGATTTTGGGTT 60.093 37.037 19.24 7.23 46.73 4.11
5598 8140 7.619965 ACAAAATGGGTATAGATTTTGGGTTG 58.380 34.615 19.24 0.00 46.73 3.77
5599 8141 7.236640 ACAAAATGGGTATAGATTTTGGGTTGT 59.763 33.333 19.24 0.00 46.73 3.32
5600 8142 6.790232 AATGGGTATAGATTTTGGGTTGTG 57.210 37.500 0.00 0.00 0.00 3.33
5601 8143 4.020543 TGGGTATAGATTTTGGGTTGTGC 58.979 43.478 0.00 0.00 0.00 4.57
5602 8144 3.066203 GGGTATAGATTTTGGGTTGTGCG 59.934 47.826 0.00 0.00 0.00 5.34
5603 8145 3.066203 GGTATAGATTTTGGGTTGTGCGG 59.934 47.826 0.00 0.00 0.00 5.69
5604 8146 2.279935 TAGATTTTGGGTTGTGCGGT 57.720 45.000 0.00 0.00 0.00 5.68
5605 8147 0.673437 AGATTTTGGGTTGTGCGGTG 59.327 50.000 0.00 0.00 0.00 4.94
5606 8148 0.319469 GATTTTGGGTTGTGCGGTGG 60.319 55.000 0.00 0.00 0.00 4.61
5607 8149 1.753368 ATTTTGGGTTGTGCGGTGGG 61.753 55.000 0.00 0.00 0.00 4.61
5608 8150 4.904590 TTGGGTTGTGCGGTGGGG 62.905 66.667 0.00 0.00 0.00 4.96
5610 8152 4.906537 GGGTTGTGCGGTGGGGTT 62.907 66.667 0.00 0.00 0.00 4.11
5611 8153 3.601685 GGTTGTGCGGTGGGGTTG 61.602 66.667 0.00 0.00 0.00 3.77
5612 8154 3.601685 GTTGTGCGGTGGGGTTGG 61.602 66.667 0.00 0.00 0.00 3.77
5617 8159 4.354162 GCGGTGGGGTTGGCCTAA 62.354 66.667 3.32 0.00 34.45 2.69
5618 8160 2.437002 CGGTGGGGTTGGCCTAAA 59.563 61.111 3.32 0.00 34.45 1.85
5619 8161 1.000145 CGGTGGGGTTGGCCTAAAT 60.000 57.895 3.32 0.00 34.45 1.40
5620 8162 1.319614 CGGTGGGGTTGGCCTAAATG 61.320 60.000 3.32 0.00 34.45 2.32
5621 8163 1.613317 GGTGGGGTTGGCCTAAATGC 61.613 60.000 3.32 0.00 34.45 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.063488 GCGTGGAAAACAGCGTGTT 59.937 52.632 0.00 0.00 43.41 3.32
179 182 7.589587 CCGCAAAAAGGAATGTTTTATTTTTCC 59.410 33.333 0.00 0.00 38.31 3.13
195 198 8.675040 TTTTAAAATGTTTTTCCGCAAAAAGG 57.325 26.923 0.00 0.00 41.23 3.11
199 202 8.612619 TGCTATTTTAAAATGTTTTTCCGCAAA 58.387 25.926 21.19 0.00 0.00 3.68
387 427 1.268992 CCCTGGTATTGGACGGTCCA 61.269 60.000 25.53 25.53 46.61 4.02
432 472 2.036958 TGGCCTGATTTGGTACGATG 57.963 50.000 3.32 0.00 0.00 3.84
433 473 2.643551 CTTGGCCTGATTTGGTACGAT 58.356 47.619 3.32 0.00 0.00 3.73
434 474 1.339631 CCTTGGCCTGATTTGGTACGA 60.340 52.381 3.32 0.00 0.00 3.43
435 475 1.094785 CCTTGGCCTGATTTGGTACG 58.905 55.000 3.32 0.00 0.00 3.67
436 476 0.817654 GCCTTGGCCTGATTTGGTAC 59.182 55.000 3.32 0.00 0.00 3.34
454 511 1.670811 CTGATGGAATGTTACCGGTGC 59.329 52.381 19.93 10.88 0.00 5.01
649 753 1.370609 TTTCTTCGTGTGGTTTGCGA 58.629 45.000 0.00 0.00 0.00 5.10
711 817 1.304713 AGCTTACGAACGGGGGAGA 60.305 57.895 0.00 0.00 0.00 3.71
774 880 0.033228 GACTCAGATCTGGATGGCCG 59.967 60.000 22.42 5.52 36.79 6.13
779 885 4.403752 TGAATTGACGACTCAGATCTGGAT 59.596 41.667 22.42 10.90 0.00 3.41
780 886 3.763897 TGAATTGACGACTCAGATCTGGA 59.236 43.478 22.42 8.56 0.00 3.86
785 891 6.867662 ACTTTTTGAATTGACGACTCAGAT 57.132 33.333 0.00 0.00 0.00 2.90
789 895 5.816919 TCCAACTTTTTGAATTGACGACTC 58.183 37.500 0.00 0.00 34.24 3.36
791 897 5.816919 TCTCCAACTTTTTGAATTGACGAC 58.183 37.500 0.00 0.00 34.24 4.34
799 905 8.635765 ACTGCTATTATCTCCAACTTTTTGAA 57.364 30.769 0.00 0.00 34.24 2.69
806 912 7.653713 CGACAAATACTGCTATTATCTCCAACT 59.346 37.037 0.00 0.00 0.00 3.16
807 913 7.438459 ACGACAAATACTGCTATTATCTCCAAC 59.562 37.037 0.00 0.00 0.00 3.77
811 921 9.031360 TCAAACGACAAATACTGCTATTATCTC 57.969 33.333 0.00 0.00 0.00 2.75
818 928 6.816640 AGCTAATCAAACGACAAATACTGCTA 59.183 34.615 0.00 0.00 0.00 3.49
819 929 5.643777 AGCTAATCAAACGACAAATACTGCT 59.356 36.000 0.00 0.00 0.00 4.24
820 930 5.869350 AGCTAATCAAACGACAAATACTGC 58.131 37.500 0.00 0.00 0.00 4.40
825 935 6.313905 CCACTAGAGCTAATCAAACGACAAAT 59.686 38.462 0.00 0.00 0.00 2.32
842 952 9.152595 GAATTAAAGAGTAACAACCCACTAGAG 57.847 37.037 0.00 0.00 0.00 2.43
844 954 7.412672 GCGAATTAAAGAGTAACAACCCACTAG 60.413 40.741 0.00 0.00 0.00 2.57
848 959 4.152759 CGCGAATTAAAGAGTAACAACCCA 59.847 41.667 0.00 0.00 0.00 4.51
859 970 6.037720 TCAATTCCATTAGCGCGAATTAAAGA 59.962 34.615 12.10 10.07 35.10 2.52
870 1002 4.654091 ACCCAAATCAATTCCATTAGCG 57.346 40.909 0.00 0.00 0.00 4.26
882 1014 2.276201 CGCGTATCTCAACCCAAATCA 58.724 47.619 0.00 0.00 0.00 2.57
888 1020 1.227176 GGGACGCGTATCTCAACCC 60.227 63.158 13.97 13.63 0.00 4.11
984 1154 2.479049 CGCCATCTCCTGCAAAATCAAG 60.479 50.000 0.00 0.00 0.00 3.02
1186 1356 6.128117 ACGAAGGTAAAACGATTTGCATATGT 60.128 34.615 8.38 1.41 33.33 2.29
1187 1357 6.255215 ACGAAGGTAAAACGATTTGCATATG 58.745 36.000 8.38 0.00 33.33 1.78
1188 1358 6.315393 AGACGAAGGTAAAACGATTTGCATAT 59.685 34.615 8.38 0.00 33.33 1.78
1189 1359 5.640357 AGACGAAGGTAAAACGATTTGCATA 59.360 36.000 8.38 0.00 33.33 3.14
1190 1360 4.454504 AGACGAAGGTAAAACGATTTGCAT 59.545 37.500 8.38 0.00 33.33 3.96
1191 1361 3.810941 AGACGAAGGTAAAACGATTTGCA 59.189 39.130 8.38 0.00 33.33 4.08
1192 1362 4.148891 CAGACGAAGGTAAAACGATTTGC 58.851 43.478 0.28 0.00 0.00 3.68
1193 1363 5.338614 ACAGACGAAGGTAAAACGATTTG 57.661 39.130 0.28 0.00 0.00 2.32
1194 1364 5.996669 AACAGACGAAGGTAAAACGATTT 57.003 34.783 0.00 0.00 0.00 2.17
1195 1365 5.996669 AAACAGACGAAGGTAAAACGATT 57.003 34.783 0.00 0.00 0.00 3.34
1386 1563 3.240861 GCTTGACTCTAGTTACGATTGCG 59.759 47.826 0.00 0.00 44.79 4.85
1401 1578 2.987149 CACGAGTTACGATTGCTTGACT 59.013 45.455 0.00 0.00 45.77 3.41
1403 1580 3.021269 ACACGAGTTACGATTGCTTGA 57.979 42.857 0.00 0.00 45.77 3.02
1404 1581 4.896562 TTACACGAGTTACGATTGCTTG 57.103 40.909 0.00 0.00 45.77 4.01
1405 1582 5.867716 AGAATTACACGAGTTACGATTGCTT 59.132 36.000 0.00 0.00 45.77 3.91
1407 1584 5.552104 CGAGAATTACACGAGTTACGATTGC 60.552 44.000 0.00 0.00 45.77 3.56
1408 1585 5.735892 TCGAGAATTACACGAGTTACGATTG 59.264 40.000 0.00 0.00 45.77 2.67
1409 1586 5.872635 TCGAGAATTACACGAGTTACGATT 58.127 37.500 0.00 0.00 45.77 3.34
1410 1587 5.475273 TCGAGAATTACACGAGTTACGAT 57.525 39.130 0.00 0.00 45.77 3.73
1411 1588 4.926860 TCGAGAATTACACGAGTTACGA 57.073 40.909 0.00 0.00 45.77 3.43
1418 1595 5.640783 TGTAAGAGACTCGAGAATTACACGA 59.359 40.000 21.68 4.36 39.04 4.35
1419 1596 5.866075 TGTAAGAGACTCGAGAATTACACG 58.134 41.667 21.68 0.00 30.47 4.49
1420 1597 7.755822 ACATTGTAAGAGACTCGAGAATTACAC 59.244 37.037 21.68 10.30 34.02 2.90
1438 1615 7.591795 CGGCAGTAATGTAAACAAACATTGTAA 59.408 33.333 11.45 0.00 46.77 2.41
1461 1639 4.023279 TGGATGCAACATATGAATTACGGC 60.023 41.667 10.38 2.84 0.00 5.68
1535 1713 6.514947 TGCAAATCTCAAACAAAGTTATGCT 58.485 32.000 0.00 0.00 0.00 3.79
1555 1733 7.979444 ACAGAGTTAAGCTTAGTAATTGCAA 57.021 32.000 0.00 0.00 0.00 4.08
1754 1960 8.443937 CCTTTTTACTACTGTATCAGAACTTGC 58.556 37.037 3.70 0.00 35.18 4.01
1774 1980 2.430694 GTTGAAGTCAGGTGCCCTTTTT 59.569 45.455 0.00 0.00 0.00 1.94
1779 1985 0.890996 CCAGTTGAAGTCAGGTGCCC 60.891 60.000 0.00 0.00 0.00 5.36
2221 2473 5.393352 GGTTCATCACAATGATTGCTTAGCA 60.393 40.000 1.39 1.39 41.49 3.49
2245 2497 6.293698 TCATCACAAGACATCAATATCTGGG 58.706 40.000 0.00 0.00 0.00 4.45
2251 2503 8.564509 TGACAAATCATCACAAGACATCAATA 57.435 30.769 0.00 0.00 0.00 1.90
2252 2504 7.457024 TGACAAATCATCACAAGACATCAAT 57.543 32.000 0.00 0.00 0.00 2.57
2292 2545 9.459276 CAACTGAAAATAAAGTGAAACAAAACG 57.541 29.630 0.00 0.00 41.43 3.60
2414 2667 7.332926 GCAAGATCTTTCTCAATTGTCTCTACA 59.667 37.037 4.86 0.00 0.00 2.74
2524 2777 9.495754 CACAAAGCTAAACTATAAAATGAGAGC 57.504 33.333 0.00 0.00 0.00 4.09
2574 2829 5.478407 GGAAAATGTGTATTTCCCCAACTG 58.522 41.667 6.75 0.00 46.61 3.16
2766 3021 4.984295 TCTCATCAACAATCACAAAGGGA 58.016 39.130 0.00 0.00 0.00 4.20
2778 3033 2.743664 CGATTTGCCACTCTCATCAACA 59.256 45.455 0.00 0.00 0.00 3.33
2826 3081 4.024893 GCTCTGAAATTGAAAGTCACGACA 60.025 41.667 0.00 0.00 0.00 4.35
3097 5610 8.037758 CCAGGAATTATAGTATAGAGTGCCTTG 58.962 40.741 0.00 0.00 0.00 3.61
3144 5676 4.032960 TGTTCCATGTAATCAAGCACCT 57.967 40.909 0.00 0.00 0.00 4.00
3168 5700 3.600388 AGTATGCTAACCTGACACAAGC 58.400 45.455 0.00 0.00 0.00 4.01
3172 5705 2.500098 TGGGAGTATGCTAACCTGACAC 59.500 50.000 5.77 0.00 0.00 3.67
3442 5979 6.542821 AGAGGGATTGTCAAGTCAATAAACA 58.457 36.000 0.00 0.00 38.03 2.83
3453 5990 6.785337 TTACGAGAATAGAGGGATTGTCAA 57.215 37.500 0.00 0.00 30.40 3.18
3457 5994 5.119279 CGCAATTACGAGAATAGAGGGATTG 59.881 44.000 0.00 0.00 34.06 2.67
3458 5995 5.010719 TCGCAATTACGAGAATAGAGGGATT 59.989 40.000 0.00 0.00 37.09 3.01
3461 5998 4.238761 TCGCAATTACGAGAATAGAGGG 57.761 45.455 0.00 0.00 37.09 4.30
3500 6037 7.916450 CCTCAAAACAACTGAAATAACGGTTTA 59.084 33.333 0.00 0.00 37.28 2.01
3540 6077 8.621532 AACATAGGATCAATTTATACGCACAT 57.378 30.769 0.00 0.00 0.00 3.21
3549 6086 7.936496 TGTGCAGAAACATAGGATCAATTTA 57.064 32.000 0.00 0.00 0.00 1.40
3602 6139 7.647715 CCAAACTTAACTGTTTCACTGTTATGG 59.352 37.037 16.75 12.75 40.51 2.74
3873 6410 4.334481 GGTTAATACGCACCTACAAGCATT 59.666 41.667 0.00 0.00 0.00 3.56
4001 6538 8.659925 AAACAAAACATTGACAGCATAAATCA 57.340 26.923 0.00 0.00 0.00 2.57
4003 6540 9.107177 TGAAAACAAAACATTGACAGCATAAAT 57.893 25.926 0.00 0.00 0.00 1.40
4062 6599 9.008965 TGTGCTAACATGTGTAATTTCAAGTAT 57.991 29.630 0.00 0.00 0.00 2.12
4085 6622 5.280945 AGAATTTGTCATTGAAACCGTGTG 58.719 37.500 0.00 0.00 0.00 3.82
4086 6623 5.299279 AGAGAATTTGTCATTGAAACCGTGT 59.701 36.000 0.00 0.00 0.00 4.49
4090 6627 8.822652 ATTTCAGAGAATTTGTCATTGAAACC 57.177 30.769 10.96 0.00 40.55 3.27
4097 6634 9.017509 ACACATGTATTTCAGAGAATTTGTCAT 57.982 29.630 0.00 0.00 0.00 3.06
4144 6681 5.357878 GCAAATGAGGTAGAACCATCATTCA 59.642 40.000 16.85 6.06 41.17 2.57
4327 6864 3.186001 GCGATGTAAGAATCTGGATGCTG 59.814 47.826 0.00 0.00 0.00 4.41
4351 6888 0.792640 CACTTACTGGCTGAAGCGTG 59.207 55.000 0.00 0.00 43.26 5.34
4564 7102 4.039092 GCAGGAGCCTGGAAGCCA 62.039 66.667 17.64 0.00 43.77 4.75
4665 7204 5.124936 ACCCCAAAACTATAGCGACAAAATC 59.875 40.000 0.00 0.00 0.00 2.17
4754 7293 7.781324 AAATCCACCTTTCTCAATGTTACAT 57.219 32.000 0.00 0.00 0.00 2.29
4823 7365 4.573201 GCTATCGGTATGTTAAGCAAACCA 59.427 41.667 0.13 0.00 37.27 3.67
4837 7379 3.787785 TGAGCAAAAATCGCTATCGGTA 58.212 40.909 0.00 0.00 40.63 4.02
4886 7428 1.129326 CGCTATTCTCGGGCGTTTAG 58.871 55.000 0.00 0.00 43.28 1.85
4909 7451 1.611491 CTCAAGGGAGAGCGAGGATAC 59.389 57.143 0.00 0.00 44.26 2.24
4939 7481 2.345124 TTTTTCGAAACGGAAGGGGA 57.655 45.000 10.79 0.00 0.00 4.81
4957 7499 3.821587 GCTTGGGGAAGGGGACTATTTTT 60.822 47.826 0.00 0.00 42.68 1.94
4958 7500 2.292257 GCTTGGGGAAGGGGACTATTTT 60.292 50.000 0.00 0.00 42.68 1.82
4959 7501 1.288037 GCTTGGGGAAGGGGACTATTT 59.712 52.381 0.00 0.00 42.68 1.40
4960 7502 0.927029 GCTTGGGGAAGGGGACTATT 59.073 55.000 0.00 0.00 42.68 1.73
4961 7503 0.253630 TGCTTGGGGAAGGGGACTAT 60.254 55.000 0.00 0.00 42.68 2.12
4962 7504 0.476808 TTGCTTGGGGAAGGGGACTA 60.477 55.000 0.00 0.00 42.68 2.59
4964 7506 0.972471 CATTGCTTGGGGAAGGGGAC 60.972 60.000 0.00 0.00 0.00 4.46
4996 7538 4.248691 AGCAGTCTGGCTTTGAAATTTC 57.751 40.909 11.41 11.41 42.71 2.17
5043 7585 5.163953 CCTGTGTCAATTGTTAGTAGCGAAG 60.164 44.000 5.13 0.00 0.00 3.79
5045 7587 4.242475 CCTGTGTCAATTGTTAGTAGCGA 58.758 43.478 5.13 0.00 0.00 4.93
5046 7588 3.181520 GCCTGTGTCAATTGTTAGTAGCG 60.182 47.826 5.13 0.00 0.00 4.26
5048 7590 4.154195 GGTGCCTGTGTCAATTGTTAGTAG 59.846 45.833 5.13 0.00 0.00 2.57
5049 7591 4.069304 GGTGCCTGTGTCAATTGTTAGTA 58.931 43.478 5.13 0.00 0.00 1.82
5050 7592 2.884639 GGTGCCTGTGTCAATTGTTAGT 59.115 45.455 5.13 0.00 0.00 2.24
5053 7595 1.774110 TGGTGCCTGTGTCAATTGTT 58.226 45.000 5.13 0.00 0.00 2.83
5054 7596 1.774110 TTGGTGCCTGTGTCAATTGT 58.226 45.000 5.13 0.00 0.00 2.71
5055 7597 2.101249 AGTTTGGTGCCTGTGTCAATTG 59.899 45.455 0.00 0.00 0.00 2.32
5057 7599 1.956477 GAGTTTGGTGCCTGTGTCAAT 59.044 47.619 0.00 0.00 0.00 2.57
5058 7600 1.388547 GAGTTTGGTGCCTGTGTCAA 58.611 50.000 0.00 0.00 0.00 3.18
5059 7601 0.465460 GGAGTTTGGTGCCTGTGTCA 60.465 55.000 0.00 0.00 0.00 3.58
5060 7602 0.465460 TGGAGTTTGGTGCCTGTGTC 60.465 55.000 0.00 0.00 0.00 3.67
5061 7603 0.033601 TTGGAGTTTGGTGCCTGTGT 60.034 50.000 0.00 0.00 0.00 3.72
5063 7605 0.258774 AGTTGGAGTTTGGTGCCTGT 59.741 50.000 0.00 0.00 0.00 4.00
5064 7606 1.067516 CAAGTTGGAGTTTGGTGCCTG 59.932 52.381 0.00 0.00 0.00 4.85
5065 7607 1.402787 CAAGTTGGAGTTTGGTGCCT 58.597 50.000 0.00 0.00 0.00 4.75
5066 7608 0.389025 CCAAGTTGGAGTTTGGTGCC 59.611 55.000 17.60 0.00 40.96 5.01
5067 7609 0.389025 CCCAAGTTGGAGTTTGGTGC 59.611 55.000 24.06 0.00 40.96 5.01
5068 7610 2.065899 TCCCAAGTTGGAGTTTGGTG 57.934 50.000 24.06 3.83 40.96 4.17
5069 7611 2.243736 TCTTCCCAAGTTGGAGTTTGGT 59.756 45.455 24.06 0.00 40.96 3.67
5083 7625 1.066430 GGCAACATCGTAGTCTTCCCA 60.066 52.381 0.00 0.00 0.00 4.37
5084 7626 1.653151 GGCAACATCGTAGTCTTCCC 58.347 55.000 0.00 0.00 0.00 3.97
5085 7627 1.278238 CGGCAACATCGTAGTCTTCC 58.722 55.000 0.00 0.00 0.00 3.46
5086 7628 1.278238 CCGGCAACATCGTAGTCTTC 58.722 55.000 0.00 0.00 0.00 2.87
5087 7629 0.108329 CCCGGCAACATCGTAGTCTT 60.108 55.000 0.00 0.00 0.00 3.01
5088 7630 1.515954 CCCGGCAACATCGTAGTCT 59.484 57.895 0.00 0.00 0.00 3.24
5090 7632 2.125269 GCCCGGCAACATCGTAGT 60.125 61.111 3.91 0.00 0.00 2.73
5091 7633 1.883084 GAGCCCGGCAACATCGTAG 60.883 63.158 13.15 0.00 0.00 3.51
5092 7634 2.185867 GAGCCCGGCAACATCGTA 59.814 61.111 13.15 0.00 0.00 3.43
5093 7635 4.778143 GGAGCCCGGCAACATCGT 62.778 66.667 13.15 0.00 0.00 3.73
5104 7646 2.436115 GGTTAGTGCACGGAGCCC 60.436 66.667 12.01 4.80 44.83 5.19
5105 7647 2.436115 GGGTTAGTGCACGGAGCC 60.436 66.667 21.99 21.99 44.83 4.70
5166 7708 2.880879 CTCCATGTCCACGCGTCG 60.881 66.667 9.86 1.68 0.00 5.12
5167 7709 2.509336 CCTCCATGTCCACGCGTC 60.509 66.667 9.86 0.00 0.00 5.19
5168 7710 4.082523 CCCTCCATGTCCACGCGT 62.083 66.667 5.58 5.58 0.00 6.01
5169 7711 4.838152 CCCCTCCATGTCCACGCG 62.838 72.222 3.53 3.53 0.00 6.01
5171 7713 4.838152 CGCCCCTCCATGTCCACG 62.838 72.222 0.00 0.00 0.00 4.94
5232 7774 4.838486 CTCCTCGTCGCACGCCTC 62.838 72.222 4.15 0.00 42.21 4.70
5369 7911 4.429212 TCCCGTCGTGACCGCATG 62.429 66.667 0.00 0.00 0.00 4.06
5370 7912 4.129737 CTCCCGTCGTGACCGCAT 62.130 66.667 0.00 0.00 0.00 4.73
5374 7916 4.477975 CTCGCTCCCGTCGTGACC 62.478 72.222 0.00 0.00 35.54 4.02
5375 7917 4.477975 CCTCGCTCCCGTCGTGAC 62.478 72.222 0.00 0.00 35.54 3.67
5385 7927 4.819761 TCATGCACGCCCTCGCTC 62.820 66.667 0.00 0.00 39.84 5.03
5386 7928 4.393155 TTCATGCACGCCCTCGCT 62.393 61.111 0.00 0.00 39.84 4.93
5387 7929 4.166011 GTTCATGCACGCCCTCGC 62.166 66.667 0.00 0.00 39.84 5.03
5388 7930 2.244436 CTTGTTCATGCACGCCCTCG 62.244 60.000 0.00 0.00 42.43 4.63
5389 7931 0.955428 TCTTGTTCATGCACGCCCTC 60.955 55.000 0.00 0.00 0.00 4.30
5390 7932 0.957395 CTCTTGTTCATGCACGCCCT 60.957 55.000 0.00 0.00 0.00 5.19
5391 7933 1.237285 ACTCTTGTTCATGCACGCCC 61.237 55.000 0.00 0.00 0.00 6.13
5392 7934 0.110056 CACTCTTGTTCATGCACGCC 60.110 55.000 0.00 0.00 0.00 5.68
5393 7935 0.110056 CCACTCTTGTTCATGCACGC 60.110 55.000 0.00 0.00 0.00 5.34
5394 7936 0.110056 GCCACTCTTGTTCATGCACG 60.110 55.000 0.00 0.00 0.00 5.34
5395 7937 0.242017 GGCCACTCTTGTTCATGCAC 59.758 55.000 0.00 0.00 0.00 4.57
5396 7938 1.236616 CGGCCACTCTTGTTCATGCA 61.237 55.000 2.24 0.00 0.00 3.96
5397 7939 1.503542 CGGCCACTCTTGTTCATGC 59.496 57.895 2.24 0.00 0.00 4.06
5398 7940 1.503542 GCGGCCACTCTTGTTCATG 59.496 57.895 2.24 0.00 0.00 3.07
5399 7941 2.034879 CGCGGCCACTCTTGTTCAT 61.035 57.895 2.24 0.00 0.00 2.57
5400 7942 2.664851 CGCGGCCACTCTTGTTCA 60.665 61.111 2.24 0.00 0.00 3.18
5401 7943 3.423154 CCGCGGCCACTCTTGTTC 61.423 66.667 14.67 0.00 0.00 3.18
5422 7964 1.321743 GCAGACATAGCGAACTTGACG 59.678 52.381 0.00 0.00 0.00 4.35
5423 7965 2.611518 AGCAGACATAGCGAACTTGAC 58.388 47.619 0.00 0.00 37.01 3.18
5424 7966 3.730963 CGTAGCAGACATAGCGAACTTGA 60.731 47.826 0.00 0.00 37.01 3.02
5425 7967 2.531912 CGTAGCAGACATAGCGAACTTG 59.468 50.000 0.00 0.00 37.01 3.16
5426 7968 2.163815 ACGTAGCAGACATAGCGAACTT 59.836 45.455 0.00 0.00 37.01 2.66
5427 7969 1.743958 ACGTAGCAGACATAGCGAACT 59.256 47.619 0.00 0.00 37.01 3.01
5428 7970 1.846782 CACGTAGCAGACATAGCGAAC 59.153 52.381 0.00 0.00 37.01 3.95
5429 7971 1.471287 ACACGTAGCAGACATAGCGAA 59.529 47.619 0.00 0.00 37.01 4.70
5430 7972 1.092348 ACACGTAGCAGACATAGCGA 58.908 50.000 0.00 0.00 37.01 4.93
5431 7973 1.846782 GAACACGTAGCAGACATAGCG 59.153 52.381 0.00 0.00 37.01 4.26
5432 7974 1.846782 CGAACACGTAGCAGACATAGC 59.153 52.381 0.00 0.00 0.00 2.97
5433 7975 3.400505 TCGAACACGTAGCAGACATAG 57.599 47.619 0.00 0.00 0.00 2.23
5434 7976 3.437741 TCTTCGAACACGTAGCAGACATA 59.562 43.478 0.00 0.00 0.00 2.29
5435 7977 2.228103 TCTTCGAACACGTAGCAGACAT 59.772 45.455 0.00 0.00 0.00 3.06
5436 7978 1.605232 TCTTCGAACACGTAGCAGACA 59.395 47.619 0.00 0.00 0.00 3.41
5437 7979 2.327081 TCTTCGAACACGTAGCAGAC 57.673 50.000 0.00 0.00 0.00 3.51
5438 7980 3.358707 TTTCTTCGAACACGTAGCAGA 57.641 42.857 0.00 0.00 0.00 4.26
5439 7981 3.673338 TCATTTCTTCGAACACGTAGCAG 59.327 43.478 0.00 0.00 0.00 4.24
5440 7982 3.427528 GTCATTTCTTCGAACACGTAGCA 59.572 43.478 0.00 0.00 0.00 3.49
5441 7983 3.479866 CGTCATTTCTTCGAACACGTAGC 60.480 47.826 0.00 0.00 0.00 3.58
5442 7984 3.910170 TCGTCATTTCTTCGAACACGTAG 59.090 43.478 0.00 0.00 0.00 3.51
5443 7985 3.887741 TCGTCATTTCTTCGAACACGTA 58.112 40.909 0.00 0.00 0.00 3.57
5444 7986 2.724690 CTCGTCATTTCTTCGAACACGT 59.275 45.455 0.00 0.00 33.32 4.49
5445 7987 2.090658 CCTCGTCATTTCTTCGAACACG 59.909 50.000 0.00 0.00 33.32 4.49
5446 7988 3.121445 GTCCTCGTCATTTCTTCGAACAC 59.879 47.826 0.00 0.00 33.32 3.32
5447 7989 3.314553 GTCCTCGTCATTTCTTCGAACA 58.685 45.455 0.00 0.00 33.32 3.18
5448 7990 2.341760 CGTCCTCGTCATTTCTTCGAAC 59.658 50.000 0.00 0.00 33.32 3.95
5449 7991 2.592194 CGTCCTCGTCATTTCTTCGAA 58.408 47.619 0.00 0.00 33.32 3.71
5450 7992 1.135489 CCGTCCTCGTCATTTCTTCGA 60.135 52.381 0.00 0.00 35.01 3.71
5451 7993 1.135489 TCCGTCCTCGTCATTTCTTCG 60.135 52.381 0.00 0.00 35.01 3.79
5452 7994 2.260481 GTCCGTCCTCGTCATTTCTTC 58.740 52.381 0.00 0.00 35.01 2.87
5453 7995 1.616865 TGTCCGTCCTCGTCATTTCTT 59.383 47.619 0.00 0.00 35.01 2.52
5454 7996 1.202582 CTGTCCGTCCTCGTCATTTCT 59.797 52.381 0.00 0.00 35.01 2.52
5455 7997 1.630148 CTGTCCGTCCTCGTCATTTC 58.370 55.000 0.00 0.00 35.01 2.17
5456 7998 0.389948 GCTGTCCGTCCTCGTCATTT 60.390 55.000 0.00 0.00 35.01 2.32
5457 7999 1.215647 GCTGTCCGTCCTCGTCATT 59.784 57.895 0.00 0.00 35.01 2.57
5458 8000 1.679305 AGCTGTCCGTCCTCGTCAT 60.679 57.895 0.00 0.00 35.01 3.06
5459 8001 2.282251 AGCTGTCCGTCCTCGTCA 60.282 61.111 0.00 0.00 35.01 4.35
5460 8002 2.179517 CAGCTGTCCGTCCTCGTC 59.820 66.667 5.25 0.00 35.01 4.20
5461 8003 3.374402 CCAGCTGTCCGTCCTCGT 61.374 66.667 13.81 0.00 35.01 4.18
5462 8004 3.374402 ACCAGCTGTCCGTCCTCG 61.374 66.667 13.81 0.00 0.00 4.63
5463 8005 1.816863 TTCACCAGCTGTCCGTCCTC 61.817 60.000 13.81 0.00 0.00 3.71
5464 8006 1.407656 TTTCACCAGCTGTCCGTCCT 61.408 55.000 13.81 0.00 0.00 3.85
5465 8007 0.321653 ATTTCACCAGCTGTCCGTCC 60.322 55.000 13.81 0.00 0.00 4.79
5466 8008 0.798776 CATTTCACCAGCTGTCCGTC 59.201 55.000 13.81 0.00 0.00 4.79
5467 8009 0.606401 CCATTTCACCAGCTGTCCGT 60.606 55.000 13.81 0.00 0.00 4.69
5468 8010 1.308069 CCCATTTCACCAGCTGTCCG 61.308 60.000 13.81 0.00 0.00 4.79
5469 8011 0.967380 CCCCATTTCACCAGCTGTCC 60.967 60.000 13.81 0.00 0.00 4.02
5470 8012 0.251341 ACCCCATTTCACCAGCTGTC 60.251 55.000 13.81 0.00 0.00 3.51
5471 8013 0.540365 CACCCCATTTCACCAGCTGT 60.540 55.000 13.81 0.00 0.00 4.40
5472 8014 0.251297 TCACCCCATTTCACCAGCTG 60.251 55.000 6.78 6.78 0.00 4.24
5473 8015 0.482446 TTCACCCCATTTCACCAGCT 59.518 50.000 0.00 0.00 0.00 4.24
5474 8016 1.337118 TTTCACCCCATTTCACCAGC 58.663 50.000 0.00 0.00 0.00 4.85
5475 8017 3.306919 CCATTTTCACCCCATTTCACCAG 60.307 47.826 0.00 0.00 0.00 4.00
5476 8018 2.636893 CCATTTTCACCCCATTTCACCA 59.363 45.455 0.00 0.00 0.00 4.17
5477 8019 2.027285 CCCATTTTCACCCCATTTCACC 60.027 50.000 0.00 0.00 0.00 4.02
5478 8020 2.027285 CCCCATTTTCACCCCATTTCAC 60.027 50.000 0.00 0.00 0.00 3.18
5479 8021 2.264455 CCCCATTTTCACCCCATTTCA 58.736 47.619 0.00 0.00 0.00 2.69
5480 8022 2.265367 ACCCCATTTTCACCCCATTTC 58.735 47.619 0.00 0.00 0.00 2.17
5481 8023 2.431687 ACCCCATTTTCACCCCATTT 57.568 45.000 0.00 0.00 0.00 2.32
5482 8024 2.892301 GCTACCCCATTTTCACCCCATT 60.892 50.000 0.00 0.00 0.00 3.16
5483 8025 1.342975 GCTACCCCATTTTCACCCCAT 60.343 52.381 0.00 0.00 0.00 4.00
5484 8026 0.040499 GCTACCCCATTTTCACCCCA 59.960 55.000 0.00 0.00 0.00 4.96
5485 8027 0.040499 TGCTACCCCATTTTCACCCC 59.960 55.000 0.00 0.00 0.00 4.95
5486 8028 1.474330 CTGCTACCCCATTTTCACCC 58.526 55.000 0.00 0.00 0.00 4.61
5487 8029 0.817654 GCTGCTACCCCATTTTCACC 59.182 55.000 0.00 0.00 0.00 4.02
5488 8030 0.451783 CGCTGCTACCCCATTTTCAC 59.548 55.000 0.00 0.00 0.00 3.18
5489 8031 0.037590 ACGCTGCTACCCCATTTTCA 59.962 50.000 0.00 0.00 0.00 2.69
5490 8032 1.135402 CAACGCTGCTACCCCATTTTC 60.135 52.381 0.00 0.00 0.00 2.29
5491 8033 0.887933 CAACGCTGCTACCCCATTTT 59.112 50.000 0.00 0.00 0.00 1.82
5492 8034 0.965363 CCAACGCTGCTACCCCATTT 60.965 55.000 0.00 0.00 0.00 2.32
5493 8035 1.378514 CCAACGCTGCTACCCCATT 60.379 57.895 0.00 0.00 0.00 3.16
5494 8036 2.272146 CCAACGCTGCTACCCCAT 59.728 61.111 0.00 0.00 0.00 4.00
5495 8037 4.028490 CCCAACGCTGCTACCCCA 62.028 66.667 0.00 0.00 0.00 4.96
5496 8038 4.029809 ACCCAACGCTGCTACCCC 62.030 66.667 0.00 0.00 0.00 4.95
5497 8039 2.175035 TACACCCAACGCTGCTACCC 62.175 60.000 0.00 0.00 0.00 3.69
5498 8040 0.739813 CTACACCCAACGCTGCTACC 60.740 60.000 0.00 0.00 0.00 3.18
5499 8041 1.359459 GCTACACCCAACGCTGCTAC 61.359 60.000 0.00 0.00 0.00 3.58
5500 8042 1.079405 GCTACACCCAACGCTGCTA 60.079 57.895 0.00 0.00 0.00 3.49
5501 8043 2.358737 GCTACACCCAACGCTGCT 60.359 61.111 0.00 0.00 0.00 4.24
5502 8044 3.788766 CGCTACACCCAACGCTGC 61.789 66.667 0.00 0.00 0.00 5.25
5503 8045 2.048597 TCGCTACACCCAACGCTG 60.049 61.111 0.00 0.00 0.00 5.18
5504 8046 2.095978 AACTCGCTACACCCAACGCT 62.096 55.000 0.00 0.00 0.00 5.07
5505 8047 1.226030 AAACTCGCTACACCCAACGC 61.226 55.000 0.00 0.00 0.00 4.84
5506 8048 0.511221 CAAACTCGCTACACCCAACG 59.489 55.000 0.00 0.00 0.00 4.10
5507 8049 1.529865 GACAAACTCGCTACACCCAAC 59.470 52.381 0.00 0.00 0.00 3.77
5508 8050 1.541670 GGACAAACTCGCTACACCCAA 60.542 52.381 0.00 0.00 0.00 4.12
5509 8051 0.034337 GGACAAACTCGCTACACCCA 59.966 55.000 0.00 0.00 0.00 4.51
5510 8052 1.012486 CGGACAAACTCGCTACACCC 61.012 60.000 0.00 0.00 0.00 4.61
5511 8053 0.038892 TCGGACAAACTCGCTACACC 60.039 55.000 0.00 0.00 0.00 4.16
5512 8054 1.058404 GTCGGACAAACTCGCTACAC 58.942 55.000 2.62 0.00 0.00 2.90
5513 8055 0.038892 GGTCGGACAAACTCGCTACA 60.039 55.000 10.76 0.00 0.00 2.74
5514 8056 0.243095 AGGTCGGACAAACTCGCTAC 59.757 55.000 10.76 0.00 0.00 3.58
5515 8057 0.524862 GAGGTCGGACAAACTCGCTA 59.475 55.000 10.76 0.00 0.00 4.26
5516 8058 1.179814 AGAGGTCGGACAAACTCGCT 61.180 55.000 10.76 0.00 35.22 4.93
5517 8059 1.009389 CAGAGGTCGGACAAACTCGC 61.009 60.000 10.76 0.00 35.22 5.03
5518 8060 0.314302 ACAGAGGTCGGACAAACTCG 59.686 55.000 10.76 6.78 35.22 4.18
5519 8061 1.336980 GGACAGAGGTCGGACAAACTC 60.337 57.143 10.76 7.54 45.28 3.01
5520 8062 0.680061 GGACAGAGGTCGGACAAACT 59.320 55.000 10.76 3.07 45.28 2.66
5521 8063 0.666577 CGGACAGAGGTCGGACAAAC 60.667 60.000 10.76 0.73 45.28 2.93
5522 8064 1.663739 CGGACAGAGGTCGGACAAA 59.336 57.895 10.76 0.00 45.28 2.83
5523 8065 2.273179 CCGGACAGAGGTCGGACAA 61.273 63.158 10.76 0.00 45.28 3.18
5524 8066 2.675423 CCGGACAGAGGTCGGACA 60.675 66.667 10.76 0.00 45.28 4.02
5525 8067 4.131088 GCCGGACAGAGGTCGGAC 62.131 72.222 5.05 0.00 45.28 4.79
5528 8070 3.569049 AAACGCCGGACAGAGGTCG 62.569 63.158 5.05 0.00 45.28 4.79
5529 8071 2.027625 CAAACGCCGGACAGAGGTC 61.028 63.158 5.05 0.00 43.55 3.85
5530 8072 2.030562 CAAACGCCGGACAGAGGT 59.969 61.111 5.05 0.00 0.00 3.85
5531 8073 1.566018 GAACAAACGCCGGACAGAGG 61.566 60.000 5.05 0.00 0.00 3.69
5532 8074 0.600255 AGAACAAACGCCGGACAGAG 60.600 55.000 5.05 0.00 0.00 3.35
5533 8075 0.599204 GAGAACAAACGCCGGACAGA 60.599 55.000 5.05 0.00 0.00 3.41
5534 8076 1.566018 GGAGAACAAACGCCGGACAG 61.566 60.000 5.05 0.00 0.00 3.51
5535 8077 1.595929 GGAGAACAAACGCCGGACA 60.596 57.895 5.05 0.00 0.00 4.02
5536 8078 2.322830 GGGAGAACAAACGCCGGAC 61.323 63.158 5.05 0.00 0.00 4.79
5537 8079 1.186917 TAGGGAGAACAAACGCCGGA 61.187 55.000 5.05 0.00 0.00 5.14
5538 8080 0.107848 ATAGGGAGAACAAACGCCGG 60.108 55.000 0.00 0.00 0.00 6.13
5539 8081 1.734163 AATAGGGAGAACAAACGCCG 58.266 50.000 0.00 0.00 0.00 6.46
5540 8082 4.514781 AAAAATAGGGAGAACAAACGCC 57.485 40.909 0.00 0.00 0.00 5.68
5541 8083 7.085052 AGATAAAAATAGGGAGAACAAACGC 57.915 36.000 0.00 0.00 0.00 4.84
5542 8084 8.263940 TGAGATAAAAATAGGGAGAACAAACG 57.736 34.615 0.00 0.00 0.00 3.60
5545 8087 9.542462 CGTATGAGATAAAAATAGGGAGAACAA 57.458 33.333 0.00 0.00 0.00 2.83
5546 8088 8.148351 CCGTATGAGATAAAAATAGGGAGAACA 58.852 37.037 0.00 0.00 34.98 3.18
5547 8089 8.365647 TCCGTATGAGATAAAAATAGGGAGAAC 58.634 37.037 0.00 0.00 36.44 3.01
5548 8090 8.365647 GTCCGTATGAGATAAAAATAGGGAGAA 58.634 37.037 4.12 0.00 39.97 2.87
5549 8091 7.507956 TGTCCGTATGAGATAAAAATAGGGAGA 59.492 37.037 4.12 1.25 39.97 3.71
5550 8092 7.667557 TGTCCGTATGAGATAAAAATAGGGAG 58.332 38.462 4.12 0.00 39.97 4.30
5551 8093 7.606135 TGTCCGTATGAGATAAAAATAGGGA 57.394 36.000 0.00 0.00 38.09 4.20
5552 8094 8.671384 TTTGTCCGTATGAGATAAAAATAGGG 57.329 34.615 0.00 0.00 34.55 3.53
5556 8098 8.413229 CCCATTTTGTCCGTATGAGATAAAAAT 58.587 33.333 10.06 7.45 37.70 1.82
5557 8099 7.394923 ACCCATTTTGTCCGTATGAGATAAAAA 59.605 33.333 10.06 6.13 37.70 1.94
5558 8100 6.887545 ACCCATTTTGTCCGTATGAGATAAAA 59.112 34.615 9.06 9.06 38.26 1.52
5559 8101 6.419791 ACCCATTTTGTCCGTATGAGATAAA 58.580 36.000 0.00 0.00 0.00 1.40
5560 8102 5.996644 ACCCATTTTGTCCGTATGAGATAA 58.003 37.500 0.00 0.00 0.00 1.75
5561 8103 5.623956 ACCCATTTTGTCCGTATGAGATA 57.376 39.130 0.00 0.00 0.00 1.98
5562 8104 4.503714 ACCCATTTTGTCCGTATGAGAT 57.496 40.909 0.00 0.00 0.00 2.75
5563 8105 3.992943 ACCCATTTTGTCCGTATGAGA 57.007 42.857 0.00 0.00 0.00 3.27
5564 8106 6.755206 TCTATACCCATTTTGTCCGTATGAG 58.245 40.000 0.00 0.00 0.00 2.90
5565 8107 6.734502 TCTATACCCATTTTGTCCGTATGA 57.265 37.500 0.00 0.00 0.00 2.15
5566 8108 7.979444 AATCTATACCCATTTTGTCCGTATG 57.021 36.000 0.00 0.00 0.00 2.39
5567 8109 8.846211 CAAAATCTATACCCATTTTGTCCGTAT 58.154 33.333 8.37 0.00 41.81 3.06
5568 8110 7.283580 CCAAAATCTATACCCATTTTGTCCGTA 59.716 37.037 13.37 0.00 43.79 4.02
5569 8111 6.096282 CCAAAATCTATACCCATTTTGTCCGT 59.904 38.462 13.37 0.00 43.79 4.69
5570 8112 6.460953 CCCAAAATCTATACCCATTTTGTCCG 60.461 42.308 13.37 2.43 43.79 4.79
5571 8113 6.382859 ACCCAAAATCTATACCCATTTTGTCC 59.617 38.462 13.37 0.00 43.79 4.02
5572 8114 7.418337 ACCCAAAATCTATACCCATTTTGTC 57.582 36.000 13.37 0.00 43.79 3.18
5573 8115 7.236640 ACAACCCAAAATCTATACCCATTTTGT 59.763 33.333 13.37 0.00 43.79 2.83
5574 8116 7.548780 CACAACCCAAAATCTATACCCATTTTG 59.451 37.037 9.26 9.26 44.43 2.44
5575 8117 7.619965 CACAACCCAAAATCTATACCCATTTT 58.380 34.615 0.00 0.00 33.37 1.82
5576 8118 6.351796 GCACAACCCAAAATCTATACCCATTT 60.352 38.462 0.00 0.00 0.00 2.32
5577 8119 5.128663 GCACAACCCAAAATCTATACCCATT 59.871 40.000 0.00 0.00 0.00 3.16
5578 8120 4.649218 GCACAACCCAAAATCTATACCCAT 59.351 41.667 0.00 0.00 0.00 4.00
5579 8121 4.020543 GCACAACCCAAAATCTATACCCA 58.979 43.478 0.00 0.00 0.00 4.51
5580 8122 3.066203 CGCACAACCCAAAATCTATACCC 59.934 47.826 0.00 0.00 0.00 3.69
5581 8123 3.066203 CCGCACAACCCAAAATCTATACC 59.934 47.826 0.00 0.00 0.00 2.73
5582 8124 3.692593 ACCGCACAACCCAAAATCTATAC 59.307 43.478 0.00 0.00 0.00 1.47
5583 8125 3.692101 CACCGCACAACCCAAAATCTATA 59.308 43.478 0.00 0.00 0.00 1.31
5584 8126 2.491693 CACCGCACAACCCAAAATCTAT 59.508 45.455 0.00 0.00 0.00 1.98
5585 8127 1.883275 CACCGCACAACCCAAAATCTA 59.117 47.619 0.00 0.00 0.00 1.98
5586 8128 0.673437 CACCGCACAACCCAAAATCT 59.327 50.000 0.00 0.00 0.00 2.40
5587 8129 0.319469 CCACCGCACAACCCAAAATC 60.319 55.000 0.00 0.00 0.00 2.17
5588 8130 1.745264 CCACCGCACAACCCAAAAT 59.255 52.632 0.00 0.00 0.00 1.82
5589 8131 2.427245 CCCACCGCACAACCCAAAA 61.427 57.895 0.00 0.00 0.00 2.44
5590 8132 2.835431 CCCACCGCACAACCCAAA 60.835 61.111 0.00 0.00 0.00 3.28
5591 8133 4.904590 CCCCACCGCACAACCCAA 62.905 66.667 0.00 0.00 0.00 4.12
5593 8135 4.906537 AACCCCACCGCACAACCC 62.907 66.667 0.00 0.00 0.00 4.11
5594 8136 3.601685 CAACCCCACCGCACAACC 61.602 66.667 0.00 0.00 0.00 3.77
5595 8137 3.601685 CCAACCCCACCGCACAAC 61.602 66.667 0.00 0.00 0.00 3.32
5600 8142 3.871850 TTTAGGCCAACCCCACCGC 62.872 63.158 5.01 0.00 36.11 5.68
5601 8143 1.000145 ATTTAGGCCAACCCCACCG 60.000 57.895 5.01 0.00 36.11 4.94
5602 8144 1.613317 GCATTTAGGCCAACCCCACC 61.613 60.000 5.01 0.00 36.11 4.61
5603 8145 1.897423 GCATTTAGGCCAACCCCAC 59.103 57.895 5.01 0.00 36.11 4.61
5604 8146 4.451544 GCATTTAGGCCAACCCCA 57.548 55.556 5.01 0.00 36.11 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.