Multiple sequence alignment - TraesCS3D01G329300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G329300 chr3D 100.000 3506 0 0 1 3506 442050748 442047243 0.000000e+00 6475.0
1 TraesCS3D01G329300 chr3D 98.077 52 1 0 1002 1053 442049714 442049663 1.340000e-14 91.6
2 TraesCS3D01G329300 chr3D 98.077 52 1 0 1035 1086 442049747 442049696 1.340000e-14 91.6
3 TraesCS3D01G329300 chr3A 91.848 1889 96 29 651 2522 582951745 582949898 0.000000e+00 2582.0
4 TraesCS3D01G329300 chr3A 95.336 536 13 5 2980 3506 582949480 582948948 0.000000e+00 841.0
5 TraesCS3D01G329300 chr3B 89.990 1958 117 26 622 2540 579294638 579292721 0.000000e+00 2457.0
6 TraesCS3D01G329300 chr3B 89.990 1958 117 26 622 2540 579311295 579309378 0.000000e+00 2457.0
7 TraesCS3D01G329300 chr3B 87.775 908 56 18 2613 3506 579292610 579291744 0.000000e+00 1011.0
8 TraesCS3D01G329300 chr3B 87.775 908 56 18 2613 3506 579309267 579308401 0.000000e+00 1011.0
9 TraesCS3D01G329300 chr3B 88.803 259 19 2 3147 3396 762147267 762147010 3.400000e-80 309.0
10 TraesCS3D01G329300 chr3B 97.980 99 2 0 3408 3506 762146152 762146054 4.650000e-39 172.0
11 TraesCS3D01G329300 chr6A 91.455 433 26 5 3085 3506 485256840 485256408 5.040000e-163 584.0
12 TraesCS3D01G329300 chr4D 96.525 259 8 1 1 258 416493409 416493151 8.990000e-116 427.0
13 TraesCS3D01G329300 chr2D 97.590 249 5 1 1 248 32946415 32946167 3.230000e-115 425.0
14 TraesCS3D01G329300 chr7D 96.498 257 8 1 1 256 180591121 180591377 1.160000e-114 424.0
15 TraesCS3D01G329300 chr6D 97.571 247 5 1 1 246 31622096 31622342 4.180000e-114 422.0
16 TraesCS3D01G329300 chr6D 97.571 247 5 1 1 246 338434498 338434744 4.180000e-114 422.0
17 TraesCS3D01G329300 chr6D 93.750 272 16 1 1 271 293823107 293823378 1.170000e-109 407.0
18 TraesCS3D01G329300 chr1B 95.802 262 6 4 1 259 340631840 340632099 5.410000e-113 418.0
19 TraesCS3D01G329300 chr1B 98.990 99 1 0 3408 3506 572108872 572108970 1.000000e-40 178.0
20 TraesCS3D01G329300 chr5D 94.796 269 10 4 1 266 454781397 454781664 1.950000e-112 416.0
21 TraesCS3D01G329300 chr5D 94.444 270 9 5 1 266 309077506 309077239 9.060000e-111 411.0
22 TraesCS3D01G329300 chr6B 91.882 271 20 2 3085 3354 6051182 6051451 9.190000e-101 377.0
23 TraesCS3D01G329300 chr5B 85.838 346 40 2 247 592 51336448 51336784 3.330000e-95 359.0
24 TraesCS3D01G329300 chr5B 90.588 255 12 6 3085 3337 6250011 6249767 9.380000e-86 327.0
25 TraesCS3D01G329300 chr5B 89.035 228 25 0 320 547 51197589 51197816 2.060000e-72 283.0
26 TraesCS3D01G329300 chr5B 97.727 44 1 0 549 592 51209303 51209346 3.750000e-10 76.8
27 TraesCS3D01G329300 chr2B 90.299 268 24 2 3086 3351 467356609 467356342 2.000000e-92 350.0
28 TraesCS3D01G329300 chr4A 77.982 327 47 17 247 568 595228305 595227999 7.730000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G329300 chr3D 442047243 442050748 3505 True 2219.4 6475 98.7180 1 3506 3 chr3D.!!$R1 3505
1 TraesCS3D01G329300 chr3A 582948948 582951745 2797 True 1711.5 2582 93.5920 651 3506 2 chr3A.!!$R1 2855
2 TraesCS3D01G329300 chr3B 579291744 579294638 2894 True 1734.0 2457 88.8825 622 3506 2 chr3B.!!$R1 2884
3 TraesCS3D01G329300 chr3B 579308401 579311295 2894 True 1734.0 2457 88.8825 622 3506 2 chr3B.!!$R2 2884
4 TraesCS3D01G329300 chr3B 762146054 762147267 1213 True 240.5 309 93.3915 3147 3506 2 chr3B.!!$R3 359

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
553 554 0.035458 GCTATGGAGGCGGCTTATGT 59.965 55.0 14.76 2.53 0.0 2.29 F
1305 1343 0.109781 CAATGCCCACCGTCTTTTCG 60.110 55.0 0.00 0.00 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2144 2203 0.179089 CAACGAGGGCTCCAGATCAG 60.179 60.0 0.0 0.0 0.0 2.90 R
2738 2859 0.039256 CGCCAAACAGACCACCATTG 60.039 55.0 0.0 0.0 0.0 2.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.119240 TCATTCTCCTAATGATGTGATCCC 57.881 41.667 0.00 0.00 32.21 3.85
24 25 4.607293 TTCTCCTAATGATGTGATCCCG 57.393 45.455 0.00 0.00 0.00 5.14
25 26 3.576861 TCTCCTAATGATGTGATCCCGT 58.423 45.455 0.00 0.00 0.00 5.28
26 27 3.967326 TCTCCTAATGATGTGATCCCGTT 59.033 43.478 0.00 0.00 0.00 4.44
27 28 4.039245 TCTCCTAATGATGTGATCCCGTTC 59.961 45.833 0.00 0.00 0.00 3.95
28 29 3.709141 TCCTAATGATGTGATCCCGTTCA 59.291 43.478 0.00 0.00 0.00 3.18
29 30 4.347876 TCCTAATGATGTGATCCCGTTCAT 59.652 41.667 0.00 0.00 0.00 2.57
30 31 4.692625 CCTAATGATGTGATCCCGTTCATC 59.307 45.833 0.00 0.00 37.68 2.92
31 32 3.843893 ATGATGTGATCCCGTTCATCA 57.156 42.857 8.70 8.70 46.43 3.07
32 33 3.625649 TGATGTGATCCCGTTCATCAA 57.374 42.857 0.00 0.00 42.01 2.57
33 34 4.155063 TGATGTGATCCCGTTCATCAAT 57.845 40.909 0.00 0.00 42.01 2.57
34 35 3.878699 TGATGTGATCCCGTTCATCAATG 59.121 43.478 0.00 0.00 42.01 2.82
35 36 3.625649 TGTGATCCCGTTCATCAATGA 57.374 42.857 0.00 0.00 31.98 2.57
36 37 3.270027 TGTGATCCCGTTCATCAATGAC 58.730 45.455 0.00 0.00 36.36 3.06
37 38 3.270027 GTGATCCCGTTCATCAATGACA 58.730 45.455 0.00 0.00 36.36 3.58
38 39 3.689161 GTGATCCCGTTCATCAATGACAA 59.311 43.478 0.00 0.00 36.36 3.18
39 40 3.689161 TGATCCCGTTCATCAATGACAAC 59.311 43.478 0.00 0.00 36.36 3.32
40 41 3.133141 TCCCGTTCATCAATGACAACA 57.867 42.857 7.44 0.00 36.36 3.33
41 42 2.811431 TCCCGTTCATCAATGACAACAC 59.189 45.455 7.44 0.00 36.36 3.32
42 43 2.551887 CCCGTTCATCAATGACAACACA 59.448 45.455 7.44 0.00 36.36 3.72
43 44 3.191162 CCCGTTCATCAATGACAACACAT 59.809 43.478 7.44 0.00 36.36 3.21
44 45 4.394610 CCCGTTCATCAATGACAACACATA 59.605 41.667 7.44 0.00 36.36 2.29
45 46 5.066375 CCCGTTCATCAATGACAACACATAT 59.934 40.000 7.44 0.00 36.36 1.78
46 47 6.194463 CCGTTCATCAATGACAACACATATC 58.806 40.000 7.44 0.00 36.36 1.63
47 48 6.037500 CCGTTCATCAATGACAACACATATCT 59.962 38.462 7.44 0.00 36.36 1.98
48 49 7.224557 CCGTTCATCAATGACAACACATATCTA 59.775 37.037 7.44 0.00 36.36 1.98
49 50 8.768019 CGTTCATCAATGACAACACATATCTAT 58.232 33.333 7.44 0.00 36.36 1.98
50 51 9.874215 GTTCATCAATGACAACACATATCTATG 57.126 33.333 2.89 0.00 36.36 2.23
51 52 8.611654 TCATCAATGACAACACATATCTATGG 57.388 34.615 2.50 0.00 38.00 2.74
52 53 8.212995 TCATCAATGACAACACATATCTATGGT 58.787 33.333 2.50 0.00 38.00 3.55
53 54 8.843262 CATCAATGACAACACATATCTATGGTT 58.157 33.333 2.50 1.57 38.00 3.67
55 56 9.546428 TCAATGACAACACATATCTATGGTTAG 57.454 33.333 2.50 2.81 38.00 2.34
56 57 8.777413 CAATGACAACACATATCTATGGTTAGG 58.223 37.037 2.50 0.00 38.00 2.69
57 58 7.669089 TGACAACACATATCTATGGTTAGGA 57.331 36.000 2.50 0.00 38.00 2.94
58 59 8.084985 TGACAACACATATCTATGGTTAGGAA 57.915 34.615 2.50 0.00 38.00 3.36
59 60 8.544622 TGACAACACATATCTATGGTTAGGAAA 58.455 33.333 2.50 0.00 38.00 3.13
60 61 8.732746 ACAACACATATCTATGGTTAGGAAAC 57.267 34.615 2.50 0.00 38.00 2.78
61 62 8.325787 ACAACACATATCTATGGTTAGGAAACA 58.674 33.333 2.50 0.00 38.00 2.83
62 63 9.342308 CAACACATATCTATGGTTAGGAAACAT 57.658 33.333 2.50 0.00 38.00 2.71
80 81 8.458843 AGGAAACATAACCATCTTTGATAAACG 58.541 33.333 0.00 0.00 0.00 3.60
81 82 8.455682 GGAAACATAACCATCTTTGATAAACGA 58.544 33.333 0.00 0.00 0.00 3.85
82 83 9.490663 GAAACATAACCATCTTTGATAAACGAG 57.509 33.333 0.00 0.00 0.00 4.18
83 84 7.016361 ACATAACCATCTTTGATAAACGAGC 57.984 36.000 0.00 0.00 0.00 5.03
84 85 6.823689 ACATAACCATCTTTGATAAACGAGCT 59.176 34.615 0.00 0.00 0.00 4.09
85 86 7.985184 ACATAACCATCTTTGATAAACGAGCTA 59.015 33.333 0.00 0.00 0.00 3.32
86 87 6.910536 AACCATCTTTGATAAACGAGCTAG 57.089 37.500 0.00 0.00 0.00 3.42
87 88 5.978814 ACCATCTTTGATAAACGAGCTAGT 58.021 37.500 0.00 0.00 0.00 2.57
88 89 6.043411 ACCATCTTTGATAAACGAGCTAGTC 58.957 40.000 0.00 0.00 0.00 2.59
89 90 6.042777 CCATCTTTGATAAACGAGCTAGTCA 58.957 40.000 0.00 0.00 0.00 3.41
90 91 6.535150 CCATCTTTGATAAACGAGCTAGTCAA 59.465 38.462 0.00 0.00 0.00 3.18
91 92 7.254252 CCATCTTTGATAAACGAGCTAGTCAAG 60.254 40.741 0.00 0.00 0.00 3.02
92 93 6.688578 TCTTTGATAAACGAGCTAGTCAAGT 58.311 36.000 0.00 0.00 0.00 3.16
93 94 7.823665 TCTTTGATAAACGAGCTAGTCAAGTA 58.176 34.615 0.00 0.00 0.00 2.24
94 95 7.968956 TCTTTGATAAACGAGCTAGTCAAGTAG 59.031 37.037 0.00 0.00 0.00 2.57
95 96 6.997239 TGATAAACGAGCTAGTCAAGTAGA 57.003 37.500 0.00 0.00 0.00 2.59
96 97 7.017498 TGATAAACGAGCTAGTCAAGTAGAG 57.983 40.000 0.00 0.00 0.00 2.43
97 98 4.705337 AAACGAGCTAGTCAAGTAGAGG 57.295 45.455 0.00 0.00 0.00 3.69
98 99 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
99 100 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
100 101 2.621055 CGAGCTAGTCAAGTAGAGGCAT 59.379 50.000 0.00 0.00 0.00 4.40
101 102 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
102 103 4.319911 CGAGCTAGTCAAGTAGAGGCATAC 60.320 50.000 0.00 0.00 0.00 2.39
103 104 4.798882 AGCTAGTCAAGTAGAGGCATACT 58.201 43.478 0.00 0.00 37.61 2.12
104 105 5.942961 AGCTAGTCAAGTAGAGGCATACTA 58.057 41.667 3.23 0.00 34.90 1.82
105 106 6.001460 AGCTAGTCAAGTAGAGGCATACTAG 58.999 44.000 0.00 0.00 38.50 2.57
106 107 5.182380 GCTAGTCAAGTAGAGGCATACTAGG 59.818 48.000 0.00 0.67 36.85 3.02
107 108 4.475345 AGTCAAGTAGAGGCATACTAGGG 58.525 47.826 3.23 0.00 34.90 3.53
108 109 4.168283 AGTCAAGTAGAGGCATACTAGGGA 59.832 45.833 3.23 0.66 34.90 4.20
109 110 5.081032 GTCAAGTAGAGGCATACTAGGGAT 58.919 45.833 3.23 0.00 34.90 3.85
110 111 6.045695 AGTCAAGTAGAGGCATACTAGGGATA 59.954 42.308 3.23 0.00 34.90 2.59
111 112 6.720288 GTCAAGTAGAGGCATACTAGGGATAA 59.280 42.308 3.23 0.00 34.90 1.75
112 113 7.397761 GTCAAGTAGAGGCATACTAGGGATAAT 59.602 40.741 3.23 0.00 34.90 1.28
113 114 7.956315 TCAAGTAGAGGCATACTAGGGATAATT 59.044 37.037 3.23 0.00 34.90 1.40
114 115 8.598041 CAAGTAGAGGCATACTAGGGATAATTT 58.402 37.037 3.23 0.00 34.90 1.82
115 116 8.140112 AGTAGAGGCATACTAGGGATAATTTG 57.860 38.462 0.00 0.00 34.21 2.32
116 117 7.735321 AGTAGAGGCATACTAGGGATAATTTGT 59.265 37.037 0.00 0.00 34.21 2.83
117 118 7.394144 AGAGGCATACTAGGGATAATTTGTT 57.606 36.000 0.00 0.00 0.00 2.83
118 119 7.816411 AGAGGCATACTAGGGATAATTTGTTT 58.184 34.615 0.00 0.00 0.00 2.83
119 120 8.282256 AGAGGCATACTAGGGATAATTTGTTTT 58.718 33.333 0.00 0.00 0.00 2.43
120 121 8.237811 AGGCATACTAGGGATAATTTGTTTTG 57.762 34.615 0.00 0.00 0.00 2.44
121 122 7.839200 AGGCATACTAGGGATAATTTGTTTTGT 59.161 33.333 0.00 0.00 0.00 2.83
122 123 8.135529 GGCATACTAGGGATAATTTGTTTTGTC 58.864 37.037 0.00 0.00 0.00 3.18
123 124 8.903820 GCATACTAGGGATAATTTGTTTTGTCT 58.096 33.333 0.00 0.00 0.00 3.41
127 128 9.975218 ACTAGGGATAATTTGTTTTGTCTATGT 57.025 29.630 0.00 0.00 0.00 2.29
138 139 9.676195 TTTGTTTTGTCTATGTATTCACACATG 57.324 29.630 0.00 0.00 39.46 3.21
139 140 8.389779 TGTTTTGTCTATGTATTCACACATGT 57.610 30.769 0.00 0.00 39.46 3.21
140 141 9.495572 TGTTTTGTCTATGTATTCACACATGTA 57.504 29.630 0.00 0.00 39.46 2.29
141 142 9.755064 GTTTTGTCTATGTATTCACACATGTAC 57.245 33.333 0.00 0.00 39.46 2.90
142 143 9.719355 TTTTGTCTATGTATTCACACATGTACT 57.281 29.630 0.00 0.00 39.46 2.73
150 151 8.542497 TGTATTCACACATGTACTAAGTTTCC 57.458 34.615 0.00 0.00 0.00 3.13
151 152 6.721571 ATTCACACATGTACTAAGTTTCCG 57.278 37.500 0.00 0.00 0.00 4.30
152 153 4.562082 TCACACATGTACTAAGTTTCCGG 58.438 43.478 0.00 0.00 0.00 5.14
153 154 4.039488 TCACACATGTACTAAGTTTCCGGT 59.961 41.667 0.00 0.00 0.00 5.28
154 155 4.753107 CACACATGTACTAAGTTTCCGGTT 59.247 41.667 0.00 0.00 0.00 4.44
155 156 5.927689 CACACATGTACTAAGTTTCCGGTTA 59.072 40.000 0.00 0.00 0.00 2.85
156 157 6.424509 CACACATGTACTAAGTTTCCGGTTAA 59.575 38.462 0.00 0.00 0.00 2.01
157 158 7.118680 CACACATGTACTAAGTTTCCGGTTAAT 59.881 37.037 0.00 0.00 0.00 1.40
158 159 8.313292 ACACATGTACTAAGTTTCCGGTTAATA 58.687 33.333 0.00 0.00 0.00 0.98
159 160 8.598075 CACATGTACTAAGTTTCCGGTTAATAC 58.402 37.037 0.00 0.00 0.00 1.89
160 161 8.313292 ACATGTACTAAGTTTCCGGTTAATACA 58.687 33.333 0.00 3.81 28.60 2.29
161 162 9.153721 CATGTACTAAGTTTCCGGTTAATACAA 57.846 33.333 0.00 0.00 28.05 2.41
162 163 9.895138 ATGTACTAAGTTTCCGGTTAATACAAT 57.105 29.630 0.00 0.00 28.05 2.71
163 164 9.723601 TGTACTAAGTTTCCGGTTAATACAATT 57.276 29.630 0.00 0.00 0.00 2.32
165 166 7.967178 ACTAAGTTTCCGGTTAATACAATTCG 58.033 34.615 0.00 0.00 0.00 3.34
166 167 7.818930 ACTAAGTTTCCGGTTAATACAATTCGA 59.181 33.333 0.00 0.00 0.00 3.71
167 168 6.657836 AGTTTCCGGTTAATACAATTCGAG 57.342 37.500 0.00 0.00 0.00 4.04
168 169 6.168389 AGTTTCCGGTTAATACAATTCGAGT 58.832 36.000 0.00 0.00 0.00 4.18
169 170 7.322664 AGTTTCCGGTTAATACAATTCGAGTA 58.677 34.615 0.00 0.00 0.00 2.59
170 171 7.983484 AGTTTCCGGTTAATACAATTCGAGTAT 59.017 33.333 0.00 0.00 33.79 2.12
171 172 7.703298 TTCCGGTTAATACAATTCGAGTATG 57.297 36.000 0.00 0.00 32.78 2.39
172 173 7.041635 TCCGGTTAATACAATTCGAGTATGA 57.958 36.000 0.00 0.00 32.78 2.15
173 174 7.490840 TCCGGTTAATACAATTCGAGTATGAA 58.509 34.615 0.00 0.00 32.78 2.57
174 175 8.145767 TCCGGTTAATACAATTCGAGTATGAAT 58.854 33.333 0.00 0.00 40.22 2.57
175 176 9.414295 CCGGTTAATACAATTCGAGTATGAATA 57.586 33.333 0.00 0.00 37.59 1.75
233 234 8.637196 AATAACTTTATTATTGCCTCTAGGGC 57.363 34.615 13.60 13.60 44.71 5.19
245 246 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
246 247 4.646572 CCTCTAGGGCATATTTCCTTCAC 58.353 47.826 0.00 0.00 34.75 3.18
247 248 4.349342 CCTCTAGGGCATATTTCCTTCACT 59.651 45.833 0.00 0.00 34.75 3.41
248 249 5.512232 CCTCTAGGGCATATTTCCTTCACTC 60.512 48.000 0.00 0.00 34.75 3.51
249 250 3.584733 AGGGCATATTTCCTTCACTCC 57.415 47.619 0.00 0.00 0.00 3.85
250 251 2.175715 AGGGCATATTTCCTTCACTCCC 59.824 50.000 0.00 0.00 0.00 4.30
251 252 2.222027 GGCATATTTCCTTCACTCCCG 58.778 52.381 0.00 0.00 0.00 5.14
252 253 2.158813 GGCATATTTCCTTCACTCCCGA 60.159 50.000 0.00 0.00 0.00 5.14
253 254 2.872858 GCATATTTCCTTCACTCCCGAC 59.127 50.000 0.00 0.00 0.00 4.79
254 255 3.681594 GCATATTTCCTTCACTCCCGACA 60.682 47.826 0.00 0.00 0.00 4.35
255 256 2.474410 ATTTCCTTCACTCCCGACAC 57.526 50.000 0.00 0.00 0.00 3.67
256 257 1.420430 TTTCCTTCACTCCCGACACT 58.580 50.000 0.00 0.00 0.00 3.55
257 258 0.679505 TTCCTTCACTCCCGACACTG 59.320 55.000 0.00 0.00 0.00 3.66
258 259 1.374758 CCTTCACTCCCGACACTGC 60.375 63.158 0.00 0.00 0.00 4.40
259 260 1.367471 CTTCACTCCCGACACTGCA 59.633 57.895 0.00 0.00 0.00 4.41
260 261 0.249868 CTTCACTCCCGACACTGCAA 60.250 55.000 0.00 0.00 0.00 4.08
261 262 0.396435 TTCACTCCCGACACTGCAAT 59.604 50.000 0.00 0.00 0.00 3.56
262 263 0.320683 TCACTCCCGACACTGCAATG 60.321 55.000 0.00 0.00 0.00 2.82
263 264 1.003355 ACTCCCGACACTGCAATGG 60.003 57.895 0.00 0.00 0.00 3.16
264 265 1.296392 CTCCCGACACTGCAATGGA 59.704 57.895 0.00 0.00 0.00 3.41
265 266 0.742281 CTCCCGACACTGCAATGGAG 60.742 60.000 0.00 0.00 34.02 3.86
266 267 2.401766 CCCGACACTGCAATGGAGC 61.402 63.158 0.46 0.00 0.00 4.70
267 268 2.743752 CCGACACTGCAATGGAGCG 61.744 63.158 0.46 0.03 37.31 5.03
268 269 2.482374 GACACTGCAATGGAGCGC 59.518 61.111 0.00 0.00 37.31 5.92
269 270 2.033141 ACACTGCAATGGAGCGCT 59.967 55.556 11.27 11.27 37.31 5.92
270 271 2.249557 GACACTGCAATGGAGCGCTG 62.250 60.000 18.48 0.53 37.31 5.18
271 272 2.749044 ACTGCAATGGAGCGCTGG 60.749 61.111 18.48 0.00 37.31 4.85
272 273 2.749044 CTGCAATGGAGCGCTGGT 60.749 61.111 18.48 0.00 37.31 4.00
273 274 2.747460 TGCAATGGAGCGCTGGTC 60.747 61.111 18.48 4.61 37.31 4.02
274 275 3.869272 GCAATGGAGCGCTGGTCG 61.869 66.667 18.48 0.00 42.12 4.79
275 276 2.125552 CAATGGAGCGCTGGTCGA 60.126 61.111 18.48 0.00 41.67 4.20
276 277 2.125512 AATGGAGCGCTGGTCGAC 60.126 61.111 18.48 7.13 41.67 4.20
277 278 3.989698 AATGGAGCGCTGGTCGACG 62.990 63.158 18.48 0.00 41.67 5.12
283 284 4.813526 CGCTGGTCGACGGTCTCG 62.814 72.222 9.92 4.82 44.44 4.04
284 285 4.477975 GCTGGTCGACGGTCTCGG 62.478 72.222 9.92 1.17 43.16 4.63
285 286 2.745100 CTGGTCGACGGTCTCGGA 60.745 66.667 9.92 0.00 43.16 4.55
286 287 2.745100 TGGTCGACGGTCTCGGAG 60.745 66.667 9.92 0.00 43.16 4.63
287 288 4.176851 GGTCGACGGTCTCGGAGC 62.177 72.222 9.92 2.53 43.16 4.70
288 289 3.126225 GTCGACGGTCTCGGAGCT 61.126 66.667 0.00 0.00 43.16 4.09
289 290 2.818714 TCGACGGTCTCGGAGCTC 60.819 66.667 4.71 4.71 43.16 4.09
290 291 3.878519 CGACGGTCTCGGAGCTCC 61.879 72.222 23.79 23.79 38.87 4.70
302 303 3.859414 AGCTCCGATGCAGCTCCC 61.859 66.667 0.00 0.00 44.25 4.30
304 305 4.598894 CTCCGATGCAGCTCCCGG 62.599 72.222 12.50 12.50 43.02 5.73
316 317 4.713735 TCCCGGCGCTGCAATGAA 62.714 61.111 11.81 0.00 0.00 2.57
317 318 4.183686 CCCGGCGCTGCAATGAAG 62.184 66.667 11.81 0.00 0.00 3.02
318 319 4.183686 CCGGCGCTGCAATGAAGG 62.184 66.667 11.81 0.00 0.00 3.46
319 320 4.842091 CGGCGCTGCAATGAAGGC 62.842 66.667 7.64 0.00 0.00 4.35
320 321 3.446570 GGCGCTGCAATGAAGGCT 61.447 61.111 7.64 0.00 0.00 4.58
321 322 2.101770 GCGCTGCAATGAAGGCTC 59.898 61.111 0.00 0.00 0.00 4.70
322 323 2.402388 CGCTGCAATGAAGGCTCG 59.598 61.111 0.00 0.00 0.00 5.03
323 324 2.101770 GCTGCAATGAAGGCTCGC 59.898 61.111 0.00 0.00 0.00 5.03
324 325 2.796651 CTGCAATGAAGGCTCGCC 59.203 61.111 0.00 0.00 0.00 5.54
325 326 3.104602 CTGCAATGAAGGCTCGCCG 62.105 63.158 1.69 0.00 41.95 6.46
326 327 3.880846 GCAATGAAGGCTCGCCGG 61.881 66.667 0.00 0.00 41.95 6.13
327 328 2.436646 CAATGAAGGCTCGCCGGT 60.437 61.111 1.90 0.00 41.95 5.28
328 329 2.436646 AATGAAGGCTCGCCGGTG 60.437 61.111 9.28 9.28 41.95 4.94
329 330 3.254024 AATGAAGGCTCGCCGGTGT 62.254 57.895 16.01 0.00 41.95 4.16
330 331 2.748058 AATGAAGGCTCGCCGGTGTT 62.748 55.000 16.01 0.86 41.95 3.32
331 332 3.423154 GAAGGCTCGCCGGTGTTG 61.423 66.667 16.01 10.45 41.95 3.33
336 337 3.114616 CTCGCCGGTGTTGCTCTG 61.115 66.667 16.01 0.00 0.00 3.35
339 340 3.058160 GCCGGTGTTGCTCTGCAT 61.058 61.111 1.90 0.00 38.76 3.96
340 341 3.044059 GCCGGTGTTGCTCTGCATC 62.044 63.158 1.90 0.00 38.76 3.91
341 342 1.672030 CCGGTGTTGCTCTGCATCA 60.672 57.895 0.00 0.00 38.76 3.07
342 343 1.028330 CCGGTGTTGCTCTGCATCAT 61.028 55.000 6.59 0.00 39.82 2.45
343 344 0.098200 CGGTGTTGCTCTGCATCATG 59.902 55.000 6.59 0.00 39.82 3.07
344 345 0.179145 GGTGTTGCTCTGCATCATGC 60.179 55.000 1.35 1.35 45.29 4.06
353 354 2.891936 GCATCATGCAGCGGACGA 60.892 61.111 4.20 0.00 44.26 4.20
354 355 3.009140 CATCATGCAGCGGACGAC 58.991 61.111 0.00 0.00 0.00 4.34
356 357 3.356639 ATCATGCAGCGGACGACGT 62.357 57.895 0.00 0.00 46.52 4.34
357 358 3.842126 CATGCAGCGGACGACGTG 61.842 66.667 4.58 0.00 46.52 4.49
361 362 4.039357 CAGCGGACGACGTGGTCT 62.039 66.667 26.58 7.80 46.52 3.85
362 363 2.359107 AGCGGACGACGTGGTCTA 60.359 61.111 26.58 0.00 46.52 2.59
363 364 2.202401 GCGGACGACGTGGTCTAC 60.202 66.667 26.58 16.64 46.52 2.59
364 365 2.684843 GCGGACGACGTGGTCTACT 61.685 63.158 26.58 0.00 46.52 2.57
365 366 1.134075 CGGACGACGTGGTCTACTG 59.866 63.158 26.58 12.79 37.12 2.74
366 367 1.154073 GGACGACGTGGTCTACTGC 60.154 63.158 26.58 9.06 37.12 4.40
367 368 1.577922 GACGACGTGGTCTACTGCA 59.422 57.895 21.76 0.00 34.09 4.41
368 369 0.728466 GACGACGTGGTCTACTGCAC 60.728 60.000 21.76 0.00 34.09 4.57
369 370 1.443872 CGACGTGGTCTACTGCACC 60.444 63.158 0.00 0.00 0.00 5.01
370 371 1.443872 GACGTGGTCTACTGCACCG 60.444 63.158 0.00 0.00 36.61 4.94
371 372 2.126071 CGTGGTCTACTGCACCGG 60.126 66.667 0.00 0.00 36.61 5.28
372 373 2.434359 GTGGTCTACTGCACCGGC 60.434 66.667 0.00 0.00 36.61 6.13
373 374 4.063967 TGGTCTACTGCACCGGCG 62.064 66.667 0.00 0.00 45.35 6.46
374 375 3.755628 GGTCTACTGCACCGGCGA 61.756 66.667 9.30 0.00 45.35 5.54
375 376 2.506438 GTCTACTGCACCGGCGAC 60.506 66.667 9.30 0.00 45.35 5.19
376 377 3.755628 TCTACTGCACCGGCGACC 61.756 66.667 9.30 0.00 45.35 4.79
377 378 4.063967 CTACTGCACCGGCGACCA 62.064 66.667 9.30 0.66 45.35 4.02
378 379 3.989698 CTACTGCACCGGCGACCAG 62.990 68.421 9.30 13.82 45.35 4.00
380 381 4.063967 CTGCACCGGCGACCAGTA 62.064 66.667 9.30 0.00 45.35 2.74
381 382 3.989698 CTGCACCGGCGACCAGTAG 62.990 68.421 9.30 0.00 45.35 2.57
383 384 4.063967 CACCGGCGACCAGTAGCA 62.064 66.667 9.30 0.00 32.66 3.49
384 385 3.075005 ACCGGCGACCAGTAGCAT 61.075 61.111 9.30 0.00 32.66 3.79
385 386 2.186903 CCGGCGACCAGTAGCATT 59.813 61.111 9.30 0.00 32.66 3.56
386 387 2.173669 CCGGCGACCAGTAGCATTG 61.174 63.158 9.30 0.00 32.66 2.82
387 388 2.173669 CGGCGACCAGTAGCATTGG 61.174 63.158 0.00 0.18 41.60 3.16
388 389 2.472909 GGCGACCAGTAGCATTGGC 61.473 63.158 5.26 0.00 39.39 4.52
414 415 3.063704 CGCTGCAATCAGGGGCAA 61.064 61.111 0.00 0.00 46.06 4.52
415 416 2.890371 GCTGCAATCAGGGGCAAG 59.110 61.111 0.00 0.00 39.93 4.01
416 417 2.890371 CTGCAATCAGGGGCAAGC 59.110 61.111 0.00 0.00 39.93 4.01
417 418 3.060020 CTGCAATCAGGGGCAAGCG 62.060 63.158 0.00 0.00 39.93 4.68
418 419 3.830192 GCAATCAGGGGCAAGCGG 61.830 66.667 0.00 0.00 0.00 5.52
419 420 3.142838 CAATCAGGGGCAAGCGGG 61.143 66.667 0.00 0.00 0.00 6.13
420 421 3.661648 AATCAGGGGCAAGCGGGT 61.662 61.111 0.00 0.00 0.00 5.28
421 422 3.944250 AATCAGGGGCAAGCGGGTG 62.944 63.158 0.00 0.00 0.00 4.61
432 433 2.661537 GCGGGTGGCTGTTTTTGC 60.662 61.111 0.00 0.00 39.11 3.68
439 440 3.306206 GGCTGTTTTTGCCGATACG 57.694 52.632 0.00 0.00 41.03 3.06
440 441 0.800012 GGCTGTTTTTGCCGATACGA 59.200 50.000 0.00 0.00 41.03 3.43
441 442 1.198178 GGCTGTTTTTGCCGATACGAA 59.802 47.619 0.00 0.00 41.03 3.85
442 443 2.505866 GCTGTTTTTGCCGATACGAAG 58.494 47.619 0.00 0.00 0.00 3.79
443 444 2.158841 GCTGTTTTTGCCGATACGAAGA 59.841 45.455 0.00 0.00 0.00 2.87
444 445 3.725010 GCTGTTTTTGCCGATACGAAGAG 60.725 47.826 0.00 0.00 0.00 2.85
445 446 3.655486 TGTTTTTGCCGATACGAAGAGA 58.345 40.909 0.00 0.00 0.00 3.10
446 447 3.678072 TGTTTTTGCCGATACGAAGAGAG 59.322 43.478 0.00 0.00 0.00 3.20
447 448 3.861276 TTTTGCCGATACGAAGAGAGA 57.139 42.857 0.00 0.00 0.00 3.10
448 449 3.422417 TTTGCCGATACGAAGAGAGAG 57.578 47.619 0.00 0.00 0.00 3.20
449 450 2.039818 TGCCGATACGAAGAGAGAGT 57.960 50.000 0.00 0.00 0.00 3.24
450 451 1.671328 TGCCGATACGAAGAGAGAGTG 59.329 52.381 0.00 0.00 0.00 3.51
451 452 1.941294 GCCGATACGAAGAGAGAGTGA 59.059 52.381 0.00 0.00 0.00 3.41
452 453 2.550606 GCCGATACGAAGAGAGAGTGAT 59.449 50.000 0.00 0.00 0.00 3.06
453 454 3.608241 GCCGATACGAAGAGAGAGTGATG 60.608 52.174 0.00 0.00 0.00 3.07
454 455 3.550561 CGATACGAAGAGAGAGTGATGC 58.449 50.000 0.00 0.00 0.00 3.91
455 456 3.249799 CGATACGAAGAGAGAGTGATGCT 59.750 47.826 0.00 0.00 0.00 3.79
456 457 4.260990 CGATACGAAGAGAGAGTGATGCTT 60.261 45.833 0.00 0.00 0.00 3.91
457 458 3.229276 ACGAAGAGAGAGTGATGCTTG 57.771 47.619 0.00 0.00 0.00 4.01
458 459 2.094286 ACGAAGAGAGAGTGATGCTTGG 60.094 50.000 0.00 0.00 0.00 3.61
459 460 2.738000 CGAAGAGAGAGTGATGCTTGGG 60.738 54.545 0.00 0.00 0.00 4.12
460 461 2.244486 AGAGAGAGTGATGCTTGGGA 57.756 50.000 0.00 0.00 0.00 4.37
461 462 2.109774 AGAGAGAGTGATGCTTGGGAG 58.890 52.381 0.00 0.00 0.00 4.30
462 463 1.138661 GAGAGAGTGATGCTTGGGAGG 59.861 57.143 0.00 0.00 0.00 4.30
463 464 0.179936 GAGAGTGATGCTTGGGAGGG 59.820 60.000 0.00 0.00 0.00 4.30
464 465 1.225704 GAGTGATGCTTGGGAGGGG 59.774 63.158 0.00 0.00 0.00 4.79
465 466 2.276309 GAGTGATGCTTGGGAGGGGG 62.276 65.000 0.00 0.00 0.00 5.40
466 467 3.743017 TGATGCTTGGGAGGGGGC 61.743 66.667 0.00 0.00 0.00 5.80
467 468 4.883354 GATGCTTGGGAGGGGGCG 62.883 72.222 0.00 0.00 0.00 6.13
471 472 4.722700 CTTGGGAGGGGGCGTGTG 62.723 72.222 0.00 0.00 0.00 3.82
481 482 4.687215 GGCGTGTGCTGCAGGAGA 62.687 66.667 17.12 8.79 42.25 3.71
482 483 3.117171 GCGTGTGCTGCAGGAGAG 61.117 66.667 17.12 7.97 38.39 3.20
483 484 3.117171 CGTGTGCTGCAGGAGAGC 61.117 66.667 17.12 1.14 35.14 4.09
484 485 2.031616 GTGTGCTGCAGGAGAGCA 59.968 61.111 17.12 4.38 44.22 4.26
487 488 4.631773 TGCTGCAGGAGAGCATTC 57.368 55.556 17.12 0.00 44.68 2.67
488 489 1.681076 TGCTGCAGGAGAGCATTCA 59.319 52.632 17.12 0.00 44.68 2.57
489 490 0.392595 TGCTGCAGGAGAGCATTCAG 60.393 55.000 17.12 0.00 44.68 3.02
490 491 1.096386 GCTGCAGGAGAGCATTCAGG 61.096 60.000 17.12 0.00 44.68 3.86
491 492 0.540454 CTGCAGGAGAGCATTCAGGA 59.460 55.000 5.57 0.00 44.68 3.86
492 493 0.986527 TGCAGGAGAGCATTCAGGAA 59.013 50.000 0.00 0.00 40.11 3.36
493 494 1.339438 TGCAGGAGAGCATTCAGGAAC 60.339 52.381 0.00 0.00 40.11 3.62
494 495 2.016096 GCAGGAGAGCATTCAGGAACC 61.016 57.143 0.00 0.00 0.00 3.62
495 496 1.280133 CAGGAGAGCATTCAGGAACCA 59.720 52.381 0.00 0.00 0.00 3.67
496 497 1.558756 AGGAGAGCATTCAGGAACCAG 59.441 52.381 0.00 0.00 0.00 4.00
497 498 1.556911 GGAGAGCATTCAGGAACCAGA 59.443 52.381 0.00 0.00 0.00 3.86
498 499 2.419851 GGAGAGCATTCAGGAACCAGAG 60.420 54.545 0.00 0.00 0.00 3.35
499 500 1.558756 AGAGCATTCAGGAACCAGAGG 59.441 52.381 0.00 0.00 0.00 3.69
500 501 0.622665 AGCATTCAGGAACCAGAGGG 59.377 55.000 0.00 0.00 41.29 4.30
501 502 1.034292 GCATTCAGGAACCAGAGGGC 61.034 60.000 0.00 0.00 37.90 5.19
502 503 0.329261 CATTCAGGAACCAGAGGGCA 59.671 55.000 0.00 0.00 37.90 5.36
503 504 1.075601 ATTCAGGAACCAGAGGGCAA 58.924 50.000 0.00 0.00 37.90 4.52
504 505 0.850100 TTCAGGAACCAGAGGGCAAA 59.150 50.000 0.00 0.00 37.90 3.68
505 506 0.401738 TCAGGAACCAGAGGGCAAAG 59.598 55.000 0.00 0.00 37.90 2.77
506 507 0.610232 CAGGAACCAGAGGGCAAAGG 60.610 60.000 0.00 0.00 37.90 3.11
507 508 1.304464 GGAACCAGAGGGCAAAGGG 60.304 63.158 0.00 0.00 37.90 3.95
508 509 1.767692 GAACCAGAGGGCAAAGGGA 59.232 57.895 0.00 0.00 37.90 4.20
509 510 0.609406 GAACCAGAGGGCAAAGGGAC 60.609 60.000 0.00 0.00 37.90 4.46
510 511 2.045926 CCAGAGGGCAAAGGGACG 60.046 66.667 0.00 0.00 0.00 4.79
511 512 2.045926 CAGAGGGCAAAGGGACGG 60.046 66.667 0.00 0.00 0.00 4.79
512 513 4.035102 AGAGGGCAAAGGGACGGC 62.035 66.667 0.00 0.00 0.00 5.68
513 514 4.035102 GAGGGCAAAGGGACGGCT 62.035 66.667 0.00 0.00 0.00 5.52
514 515 4.351054 AGGGCAAAGGGACGGCTG 62.351 66.667 0.00 0.00 0.00 4.85
518 519 2.436646 CAAAGGGACGGCTGCGAT 60.437 61.111 0.00 0.00 0.00 4.58
519 520 2.436646 AAAGGGACGGCTGCGATG 60.437 61.111 0.00 0.00 0.00 3.84
520 521 3.976701 AAAGGGACGGCTGCGATGG 62.977 63.158 0.00 0.00 0.00 3.51
527 528 2.588877 GGCTGCGATGGTGCGTAT 60.589 61.111 0.00 0.00 37.81 3.06
528 529 2.598632 GGCTGCGATGGTGCGTATC 61.599 63.158 0.00 0.00 37.81 2.24
529 530 1.592669 GCTGCGATGGTGCGTATCT 60.593 57.895 0.00 0.00 37.81 1.98
530 531 0.318699 GCTGCGATGGTGCGTATCTA 60.319 55.000 0.00 0.00 37.81 1.98
531 532 1.691127 CTGCGATGGTGCGTATCTAG 58.309 55.000 0.00 0.00 37.81 2.43
532 533 0.318699 TGCGATGGTGCGTATCTAGC 60.319 55.000 0.00 0.00 37.81 3.42
533 534 1.337817 GCGATGGTGCGTATCTAGCG 61.338 60.000 0.00 0.00 37.44 4.26
534 535 0.729478 CGATGGTGCGTATCTAGCGG 60.729 60.000 0.00 0.00 37.44 5.52
535 536 1.006102 ATGGTGCGTATCTAGCGGC 60.006 57.895 0.00 0.00 37.44 6.53
536 537 1.464376 ATGGTGCGTATCTAGCGGCT 61.464 55.000 7.98 7.98 37.44 5.52
537 538 0.820482 TGGTGCGTATCTAGCGGCTA 60.820 55.000 9.71 9.71 37.44 3.93
538 539 0.526662 GGTGCGTATCTAGCGGCTAT 59.473 55.000 10.62 0.00 37.44 2.97
539 540 1.618861 GTGCGTATCTAGCGGCTATG 58.381 55.000 10.62 5.26 37.44 2.23
540 541 0.526211 TGCGTATCTAGCGGCTATGG 59.474 55.000 10.62 0.00 37.44 2.74
541 542 0.809385 GCGTATCTAGCGGCTATGGA 59.191 55.000 10.62 5.80 0.00 3.41
542 543 1.202200 GCGTATCTAGCGGCTATGGAG 60.202 57.143 10.62 0.17 0.00 3.86
543 544 1.402259 CGTATCTAGCGGCTATGGAGG 59.598 57.143 10.62 0.00 0.00 4.30
544 545 1.135333 GTATCTAGCGGCTATGGAGGC 59.865 57.143 10.62 0.00 44.80 4.70
550 551 3.148084 GGCTATGGAGGCGGCTTA 58.852 61.111 14.76 6.09 38.67 3.09
551 552 1.679898 GGCTATGGAGGCGGCTTAT 59.320 57.895 14.76 13.61 38.67 1.73
552 553 0.674895 GGCTATGGAGGCGGCTTATG 60.675 60.000 14.76 7.43 38.67 1.90
553 554 0.035458 GCTATGGAGGCGGCTTATGT 59.965 55.000 14.76 2.53 0.00 2.29
554 555 1.543429 GCTATGGAGGCGGCTTATGTT 60.543 52.381 14.76 0.00 0.00 2.71
555 556 2.851195 CTATGGAGGCGGCTTATGTTT 58.149 47.619 14.76 0.00 0.00 2.83
556 557 1.680338 ATGGAGGCGGCTTATGTTTC 58.320 50.000 14.76 0.00 0.00 2.78
557 558 0.393808 TGGAGGCGGCTTATGTTTCC 60.394 55.000 14.76 8.71 0.00 3.13
558 559 1.101635 GGAGGCGGCTTATGTTTCCC 61.102 60.000 14.76 2.66 0.00 3.97
559 560 0.393808 GAGGCGGCTTATGTTTCCCA 60.394 55.000 14.76 0.00 0.00 4.37
560 561 0.258774 AGGCGGCTTATGTTTCCCAT 59.741 50.000 5.25 0.00 37.58 4.00
561 562 1.493022 AGGCGGCTTATGTTTCCCATA 59.507 47.619 5.25 0.00 34.86 2.74
562 563 2.092103 AGGCGGCTTATGTTTCCCATAA 60.092 45.455 5.25 0.00 42.42 1.90
563 564 2.691011 GGCGGCTTATGTTTCCCATAAA 59.309 45.455 0.00 0.00 43.64 1.40
564 565 3.320826 GGCGGCTTATGTTTCCCATAAAT 59.679 43.478 0.00 0.00 43.64 1.40
565 566 4.546570 GCGGCTTATGTTTCCCATAAATC 58.453 43.478 0.00 0.00 43.64 2.17
566 567 4.037446 GCGGCTTATGTTTCCCATAAATCA 59.963 41.667 0.00 0.00 43.64 2.57
567 568 5.451242 GCGGCTTATGTTTCCCATAAATCAA 60.451 40.000 0.00 0.00 43.64 2.57
568 569 5.977129 CGGCTTATGTTTCCCATAAATCAAC 59.023 40.000 0.00 0.00 43.64 3.18
569 570 6.280643 GGCTTATGTTTCCCATAAATCAACC 58.719 40.000 0.00 0.00 43.64 3.77
570 571 5.977129 GCTTATGTTTCCCATAAATCAACCG 59.023 40.000 0.00 0.00 43.64 4.44
571 572 6.458232 TTATGTTTCCCATAAATCAACCGG 57.542 37.500 0.00 0.00 41.86 5.28
572 573 4.035612 TGTTTCCCATAAATCAACCGGA 57.964 40.909 9.46 0.00 0.00 5.14
573 574 4.605183 TGTTTCCCATAAATCAACCGGAT 58.395 39.130 9.46 0.00 38.05 4.18
574 575 4.400884 TGTTTCCCATAAATCAACCGGATG 59.599 41.667 9.46 7.03 36.02 3.51
575 576 4.511786 TTCCCATAAATCAACCGGATGA 57.488 40.909 17.51 17.51 36.02 2.92
576 577 4.722526 TCCCATAAATCAACCGGATGAT 57.277 40.909 20.61 20.61 41.74 2.45
583 584 4.900635 AATCAACCGGATGATTTGTAGC 57.099 40.909 28.63 0.00 45.39 3.58
584 585 3.342377 TCAACCGGATGATTTGTAGCA 57.658 42.857 10.84 0.00 0.00 3.49
585 586 3.270027 TCAACCGGATGATTTGTAGCAG 58.730 45.455 10.84 0.00 0.00 4.24
586 587 3.009723 CAACCGGATGATTTGTAGCAGT 58.990 45.455 9.46 0.00 0.00 4.40
587 588 2.632377 ACCGGATGATTTGTAGCAGTG 58.368 47.619 9.46 0.00 0.00 3.66
588 589 1.942657 CCGGATGATTTGTAGCAGTGG 59.057 52.381 0.00 0.00 0.00 4.00
589 590 1.331756 CGGATGATTTGTAGCAGTGGC 59.668 52.381 0.00 0.00 41.61 5.01
590 591 1.678101 GGATGATTTGTAGCAGTGGCC 59.322 52.381 0.00 0.00 42.56 5.36
591 592 2.368439 GATGATTTGTAGCAGTGGCCA 58.632 47.619 0.00 0.00 42.56 5.36
592 593 2.284754 TGATTTGTAGCAGTGGCCAA 57.715 45.000 7.24 0.00 42.56 4.52
593 594 2.591923 TGATTTGTAGCAGTGGCCAAA 58.408 42.857 7.24 0.00 42.56 3.28
594 595 2.557924 TGATTTGTAGCAGTGGCCAAAG 59.442 45.455 7.24 3.63 42.56 2.77
595 596 2.356665 TTTGTAGCAGTGGCCAAAGA 57.643 45.000 7.24 0.00 42.56 2.52
596 597 2.356665 TTGTAGCAGTGGCCAAAGAA 57.643 45.000 7.24 0.00 42.56 2.52
597 598 2.356665 TGTAGCAGTGGCCAAAGAAA 57.643 45.000 7.24 0.00 42.56 2.52
598 599 2.660572 TGTAGCAGTGGCCAAAGAAAA 58.339 42.857 7.24 0.00 42.56 2.29
599 600 3.027412 TGTAGCAGTGGCCAAAGAAAAA 58.973 40.909 7.24 0.00 42.56 1.94
627 628 6.766452 AACTAGAAGAAGAAAACGCACTAC 57.234 37.500 0.00 0.00 0.00 2.73
638 639 5.995897 AGAAAACGCACTACAGTTCCTAAAT 59.004 36.000 0.00 0.00 0.00 1.40
649 650 2.378547 AGTTCCTAAATGGGCCAGTTCA 59.621 45.455 24.07 8.89 36.20 3.18
723 724 4.410448 CGAGGTAGTCGGTAACTTTTCTC 58.590 47.826 0.00 0.00 45.58 2.87
724 725 4.083110 CGAGGTAGTCGGTAACTTTTCTCA 60.083 45.833 0.00 0.00 45.58 3.27
725 726 5.563475 CGAGGTAGTCGGTAACTTTTCTCAA 60.563 44.000 0.00 0.00 45.58 3.02
726 727 5.536260 AGGTAGTCGGTAACTTTTCTCAAC 58.464 41.667 0.00 0.00 39.55 3.18
727 728 5.069516 AGGTAGTCGGTAACTTTTCTCAACA 59.930 40.000 0.00 0.00 39.55 3.33
728 729 5.754890 GGTAGTCGGTAACTTTTCTCAACAA 59.245 40.000 0.00 0.00 39.55 2.83
729 730 6.258507 GGTAGTCGGTAACTTTTCTCAACAAA 59.741 38.462 0.00 0.00 39.55 2.83
730 731 6.746745 AGTCGGTAACTTTTCTCAACAAAA 57.253 33.333 0.00 0.00 33.03 2.44
731 732 6.782150 AGTCGGTAACTTTTCTCAACAAAAG 58.218 36.000 4.49 4.49 45.33 2.27
740 741 6.746745 TTTTCTCAACAAAAGTCGGTAACT 57.253 33.333 0.00 0.00 41.10 2.24
756 761 6.802834 GTCGGTAACTTGTTTTTCTCAACAAA 59.197 34.615 1.03 0.00 44.21 2.83
758 763 7.539366 TCGGTAACTTGTTTTTCTCAACAAAAG 59.461 33.333 1.03 0.00 44.21 2.27
799 804 2.488153 GGAAAAGGAATCTTGGTCCGTG 59.512 50.000 0.00 0.00 40.36 4.94
849 860 1.476833 CCCCCTAAACCCATCATCGTG 60.477 57.143 0.00 0.00 0.00 4.35
952 967 2.783288 CCCCTAACGTCCTCGGCTC 61.783 68.421 0.00 0.00 41.85 4.70
1021 1059 2.704193 GAAGCGTCAACGTCGTCCG 61.704 63.158 0.00 2.96 42.22 4.79
1305 1343 0.109781 CAATGCCCACCGTCTTTTCG 60.110 55.000 0.00 0.00 0.00 3.46
1318 1356 2.872858 GTCTTTTCGCTCCAAGACAAGT 59.127 45.455 11.76 0.00 45.64 3.16
1363 1401 4.914983 TCTTGATTGAGTTCTTGATGGCT 58.085 39.130 0.00 0.00 0.00 4.75
1366 1404 4.005650 TGATTGAGTTCTTGATGGCTGTC 58.994 43.478 0.00 0.00 0.00 3.51
1728 1774 4.907809 CTGGTCAGCCATAATCATCATCT 58.092 43.478 0.00 0.00 45.05 2.90
1729 1775 4.903054 TGGTCAGCCATAATCATCATCTC 58.097 43.478 0.00 0.00 40.46 2.75
1730 1776 4.348754 TGGTCAGCCATAATCATCATCTCA 59.651 41.667 0.00 0.00 40.46 3.27
1767 1813 5.504853 TGCATGTCCATCTAATTTGGTACA 58.495 37.500 0.00 0.14 35.64 2.90
1770 1816 7.228507 TGCATGTCCATCTAATTTGGTACATAC 59.771 37.037 0.00 7.39 39.30 2.39
1778 1824 6.509656 TCTAATTTGGTACATACCTAGCGTG 58.490 40.000 9.46 0.00 46.58 5.34
1799 1845 3.003585 TGTCTGTGTTTGATGATGTGTGC 59.996 43.478 0.00 0.00 0.00 4.57
1811 1857 1.014044 ATGTGTGCCGATCGTGTGTC 61.014 55.000 15.09 2.37 0.00 3.67
1830 1877 0.520404 CTTGCTTGCAGCTCAACGAT 59.480 50.000 9.12 0.00 42.97 3.73
2088 2147 2.190578 CAGGTCCAAGGATCCGGC 59.809 66.667 5.98 0.00 0.00 6.13
2089 2148 2.041265 AGGTCCAAGGATCCGGCT 59.959 61.111 5.98 0.00 0.00 5.52
2090 2149 2.066999 AGGTCCAAGGATCCGGCTC 61.067 63.158 5.98 0.00 0.00 4.70
2091 2150 2.506472 GTCCAAGGATCCGGCTCC 59.494 66.667 16.90 16.90 35.37 4.70
2092 2151 3.154473 TCCAAGGATCCGGCTCCG 61.154 66.667 18.42 5.51 40.46 4.63
2153 2212 1.825474 GTTCGACCTTCCTGATCTGGA 59.175 52.381 16.80 16.80 0.00 3.86
2159 2218 0.758123 CTTCCTGATCTGGAGCCCTC 59.242 60.000 19.40 0.00 37.43 4.30
2162 2221 1.333636 CCTGATCTGGAGCCCTCGTT 61.334 60.000 13.18 0.00 0.00 3.85
2166 2225 1.965754 ATCTGGAGCCCTCGTTGAGC 61.966 60.000 0.00 0.00 0.00 4.26
2168 2227 4.070552 GGAGCCCTCGTTGAGCGT 62.071 66.667 0.00 0.00 42.13 5.07
2176 2235 1.209128 CTCGTTGAGCGTGAACAGTT 58.791 50.000 0.00 0.00 42.13 3.16
2186 2245 2.384382 CGTGAACAGTTTTGACCATGC 58.616 47.619 0.00 0.00 0.00 4.06
2191 2250 1.608590 ACAGTTTTGACCATGCCTTCG 59.391 47.619 0.00 0.00 0.00 3.79
2192 2251 1.068333 CAGTTTTGACCATGCCTTCGG 60.068 52.381 0.00 0.00 0.00 4.30
2231 2290 2.441750 GGGCCTGGAACCTGTATTATCA 59.558 50.000 0.84 0.00 0.00 2.15
2237 2296 5.036117 TGGAACCTGTATTATCAAGAGGC 57.964 43.478 0.00 0.00 0.00 4.70
2246 2305 3.746045 TTATCAAGAGGCCACCGATAC 57.254 47.619 5.01 0.00 0.00 2.24
2254 2313 1.222115 GGCCACCGATACTGATTCGC 61.222 60.000 0.00 0.00 35.31 4.70
2295 2354 0.523966 CTAGCGACCCTGATCCGATC 59.476 60.000 1.01 1.01 0.00 3.69
2299 2358 1.287503 GACCCTGATCCGATCGAGC 59.712 63.158 18.66 6.27 0.00 5.03
2304 2363 2.917751 GATCCGATCGAGCCCCCA 60.918 66.667 18.66 0.00 0.00 4.96
2335 2397 3.847602 CTGCTCCTCAGCCTCGGG 61.848 72.222 0.00 0.00 46.26 5.14
2351 2413 0.249073 CGGGATGTCGTCACTGATCC 60.249 60.000 0.00 0.00 0.00 3.36
2362 2424 1.112315 CACTGATCCTCCCTCCTCCG 61.112 65.000 0.00 0.00 0.00 4.63
2388 2450 2.844146 GGTCGTCTTGAACACGCG 59.156 61.111 3.53 3.53 37.18 6.01
2393 2455 1.204312 GTCTTGAACACGCGAAGGC 59.796 57.895 15.93 2.52 0.00 4.35
2499 2561 2.256461 GCAAAGCAAGACGGCCAG 59.744 61.111 2.24 0.00 0.00 4.85
2506 2568 1.071699 AGCAAGACGGCCAGAACTAAA 59.928 47.619 2.24 0.00 0.00 1.85
2522 2584 8.554528 CCAGAACTAAATCTGTGTAATGCATAG 58.445 37.037 0.00 0.00 44.32 2.23
2592 2696 2.413310 TGATAGGCCTTTCGGGTTTC 57.587 50.000 12.58 0.00 37.43 2.78
2611 2715 5.191124 GGTTTCCCCTAGGACAAAGATAAGA 59.809 44.000 11.48 0.00 43.90 2.10
2660 2781 2.488891 AGGAACTGGTTAGCATGTTGCA 60.489 45.455 15.47 0.00 42.34 4.08
2687 2808 7.865385 GTGAAATTTTGACAACAATAGGTGCTA 59.135 33.333 0.00 0.00 35.85 3.49
2699 2820 5.652014 ACAATAGGTGCTAATTTGCTGCTAA 59.348 36.000 12.99 0.00 0.00 3.09
2723 2844 8.894768 AATGGAGCAGTACATATTTAAGAGTC 57.105 34.615 0.00 0.00 0.00 3.36
2727 2848 8.585881 GGAGCAGTACATATTTAAGAGTCCATA 58.414 37.037 0.00 0.00 0.00 2.74
2756 2880 1.000274 GACAATGGTGGTCTGTTTGGC 60.000 52.381 0.00 0.00 32.54 4.52
2771 2903 3.286751 GGCGTGCTTGTGCTGGAA 61.287 61.111 0.00 0.00 40.48 3.53
2776 2908 2.855180 CGTGCTTGTGCTGGAATTTAG 58.145 47.619 0.00 0.00 40.48 1.85
2777 2909 2.599659 GTGCTTGTGCTGGAATTTAGC 58.400 47.619 8.28 8.28 41.49 3.09
2786 2921 4.654091 GCTGGAATTTAGCAAAGGCATA 57.346 40.909 9.89 0.00 44.61 3.14
2787 2922 4.363138 GCTGGAATTTAGCAAAGGCATAC 58.637 43.478 9.89 0.00 44.61 2.39
2795 2930 6.648879 TTTAGCAAAGGCATACTTGAACTT 57.351 33.333 0.00 0.00 44.61 2.66
2800 2935 5.622233 GCAAAGGCATACTTGAACTTTAGGG 60.622 44.000 0.00 0.00 39.96 3.53
2804 2939 5.710567 AGGCATACTTGAACTTTAGGGTTTC 59.289 40.000 0.00 0.00 0.00 2.78
2883 3020 1.515521 GACACAGGGGCCGTTTGAAG 61.516 60.000 18.46 7.83 0.00 3.02
2884 3021 2.115266 ACAGGGGCCGTTTGAAGG 59.885 61.111 0.00 0.00 0.00 3.46
2886 3023 1.675641 CAGGGGCCGTTTGAAGGAG 60.676 63.158 0.00 0.00 0.00 3.69
2914 3052 4.588106 TCCAGATTGAGTTTGCCAAATTCA 59.412 37.500 10.88 10.88 35.65 2.57
2918 3056 6.310467 CAGATTGAGTTTGCCAAATTCATCTG 59.690 38.462 23.55 23.55 37.05 2.90
2946 3120 6.038825 TCCAGTCGTTCAAATTTTAGCTTTGA 59.961 34.615 0.00 0.00 40.02 2.69
2949 3123 9.393249 CAGTCGTTCAAATTTTAGCTTTGATAA 57.607 29.630 0.00 0.00 41.03 1.75
2962 3136 8.962884 TTAGCTTTGATAATCTAATGTGCTCA 57.037 30.769 0.00 0.00 0.00 4.26
2963 3137 7.870509 AGCTTTGATAATCTAATGTGCTCAA 57.129 32.000 0.00 0.00 0.00 3.02
2964 3138 7.701445 AGCTTTGATAATCTAATGTGCTCAAC 58.299 34.615 0.00 0.00 0.00 3.18
2965 3139 7.555554 AGCTTTGATAATCTAATGTGCTCAACT 59.444 33.333 0.00 0.00 0.00 3.16
2966 3140 7.854916 GCTTTGATAATCTAATGTGCTCAACTC 59.145 37.037 0.00 0.00 0.00 3.01
2967 3141 7.468922 TTGATAATCTAATGTGCTCAACTCG 57.531 36.000 0.00 0.00 0.00 4.18
2968 3142 6.805713 TGATAATCTAATGTGCTCAACTCGA 58.194 36.000 0.00 0.00 0.00 4.04
2969 3143 7.264947 TGATAATCTAATGTGCTCAACTCGAA 58.735 34.615 0.00 0.00 0.00 3.71
2970 3144 7.763985 TGATAATCTAATGTGCTCAACTCGAAA 59.236 33.333 0.00 0.00 0.00 3.46
2971 3145 6.801539 AATCTAATGTGCTCAACTCGAAAA 57.198 33.333 0.00 0.00 0.00 2.29
2972 3146 6.801539 ATCTAATGTGCTCAACTCGAAAAA 57.198 33.333 0.00 0.00 0.00 1.94
3042 3216 2.262915 GGCCCACTCGACAGTCTG 59.737 66.667 0.00 0.00 0.00 3.51
3206 3380 4.176752 CCGCTCCCCAACCCTAGC 62.177 72.222 0.00 0.00 0.00 3.42
3212 3386 4.101448 CCCAACCCTAGCAGCGCT 62.101 66.667 2.64 2.64 43.41 5.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.279657 CGGGATCACATCATTAGGAGAATGA 60.280 44.000 0.00 2.66 40.50 2.57
1 2 4.934001 CGGGATCACATCATTAGGAGAATG 59.066 45.833 0.00 0.00 0.00 2.67
2 3 4.594920 ACGGGATCACATCATTAGGAGAAT 59.405 41.667 0.00 0.00 0.00 2.40
3 4 3.967326 ACGGGATCACATCATTAGGAGAA 59.033 43.478 0.00 0.00 0.00 2.87
5 6 4.202253 TGAACGGGATCACATCATTAGGAG 60.202 45.833 0.00 0.00 0.00 3.69
6 7 3.709141 TGAACGGGATCACATCATTAGGA 59.291 43.478 0.00 0.00 0.00 2.94
7 8 4.071961 TGAACGGGATCACATCATTAGG 57.928 45.455 0.00 0.00 0.00 2.69
8 9 5.299949 TGATGAACGGGATCACATCATTAG 58.700 41.667 12.97 0.00 42.31 1.73
9 10 5.289083 TGATGAACGGGATCACATCATTA 57.711 39.130 12.97 7.64 42.31 1.90
10 11 4.155063 TGATGAACGGGATCACATCATT 57.845 40.909 12.97 0.36 42.31 2.57
11 12 3.843893 TGATGAACGGGATCACATCAT 57.156 42.857 11.89 11.89 42.31 2.45
12 13 3.625649 TTGATGAACGGGATCACATCA 57.374 42.857 0.00 0.00 44.40 3.07
13 14 4.024556 GTCATTGATGAACGGGATCACATC 60.025 45.833 0.00 0.00 38.75 3.06
14 15 3.879295 GTCATTGATGAACGGGATCACAT 59.121 43.478 0.00 0.00 38.75 3.21
15 16 3.270027 GTCATTGATGAACGGGATCACA 58.730 45.455 0.00 0.00 38.75 3.58
16 17 3.270027 TGTCATTGATGAACGGGATCAC 58.730 45.455 0.00 0.00 38.75 3.06
17 18 3.625649 TGTCATTGATGAACGGGATCA 57.374 42.857 0.00 0.00 38.75 2.92
18 19 3.689161 TGTTGTCATTGATGAACGGGATC 59.311 43.478 0.00 0.00 38.75 3.36
19 20 3.440173 GTGTTGTCATTGATGAACGGGAT 59.560 43.478 0.00 0.00 38.75 3.85
20 21 2.811431 GTGTTGTCATTGATGAACGGGA 59.189 45.455 0.00 0.00 38.75 5.14
21 22 2.551887 TGTGTTGTCATTGATGAACGGG 59.448 45.455 0.00 0.00 38.75 5.28
22 23 3.894782 TGTGTTGTCATTGATGAACGG 57.105 42.857 0.00 0.00 38.75 4.44
23 24 7.008440 AGATATGTGTTGTCATTGATGAACG 57.992 36.000 0.00 0.00 38.75 3.95
24 25 9.874215 CATAGATATGTGTTGTCATTGATGAAC 57.126 33.333 0.00 0.00 38.75 3.18
25 26 9.059260 CCATAGATATGTGTTGTCATTGATGAA 57.941 33.333 0.00 0.00 33.68 2.57
26 27 8.212995 ACCATAGATATGTGTTGTCATTGATGA 58.787 33.333 0.00 0.00 31.82 2.92
27 28 8.387190 ACCATAGATATGTGTTGTCATTGATG 57.613 34.615 0.00 0.00 31.82 3.07
28 29 8.985315 AACCATAGATATGTGTTGTCATTGAT 57.015 30.769 0.00 0.00 30.96 2.57
29 30 9.546428 CTAACCATAGATATGTGTTGTCATTGA 57.454 33.333 12.86 0.00 32.89 2.57
30 31 8.777413 CCTAACCATAGATATGTGTTGTCATTG 58.223 37.037 12.86 0.00 32.89 2.82
31 32 8.713971 TCCTAACCATAGATATGTGTTGTCATT 58.286 33.333 12.86 0.00 32.89 2.57
32 33 8.262601 TCCTAACCATAGATATGTGTTGTCAT 57.737 34.615 12.86 0.00 32.89 3.06
33 34 7.669089 TCCTAACCATAGATATGTGTTGTCA 57.331 36.000 12.86 0.00 32.89 3.58
34 35 8.827677 GTTTCCTAACCATAGATATGTGTTGTC 58.172 37.037 12.86 0.00 32.89 3.18
35 36 8.325787 TGTTTCCTAACCATAGATATGTGTTGT 58.674 33.333 12.86 0.00 32.89 3.32
36 37 8.731275 TGTTTCCTAACCATAGATATGTGTTG 57.269 34.615 12.86 6.72 32.89 3.33
50 51 7.696992 TCAAAGATGGTTATGTTTCCTAACC 57.303 36.000 5.49 5.49 45.53 2.85
54 55 8.458843 CGTTTATCAAAGATGGTTATGTTTCCT 58.541 33.333 0.00 0.00 28.23 3.36
55 56 8.455682 TCGTTTATCAAAGATGGTTATGTTTCC 58.544 33.333 0.00 0.00 28.23 3.13
56 57 9.490663 CTCGTTTATCAAAGATGGTTATGTTTC 57.509 33.333 0.00 0.00 28.23 2.78
57 58 7.968405 GCTCGTTTATCAAAGATGGTTATGTTT 59.032 33.333 0.00 0.00 30.61 2.83
58 59 7.336931 AGCTCGTTTATCAAAGATGGTTATGTT 59.663 33.333 0.00 0.00 0.00 2.71
59 60 6.823689 AGCTCGTTTATCAAAGATGGTTATGT 59.176 34.615 0.00 0.00 0.00 2.29
60 61 7.251704 AGCTCGTTTATCAAAGATGGTTATG 57.748 36.000 0.00 0.00 0.00 1.90
61 62 8.204836 ACTAGCTCGTTTATCAAAGATGGTTAT 58.795 33.333 0.00 0.00 0.00 1.89
62 63 7.553334 ACTAGCTCGTTTATCAAAGATGGTTA 58.447 34.615 0.00 0.00 0.00 2.85
63 64 6.407202 ACTAGCTCGTTTATCAAAGATGGTT 58.593 36.000 0.00 0.00 0.00 3.67
64 65 5.978814 ACTAGCTCGTTTATCAAAGATGGT 58.021 37.500 0.00 0.00 0.00 3.55
65 66 6.042777 TGACTAGCTCGTTTATCAAAGATGG 58.957 40.000 0.00 0.00 0.00 3.51
66 67 7.276658 ACTTGACTAGCTCGTTTATCAAAGATG 59.723 37.037 0.00 0.00 0.00 2.90
67 68 7.324178 ACTTGACTAGCTCGTTTATCAAAGAT 58.676 34.615 0.00 0.00 0.00 2.40
68 69 6.688578 ACTTGACTAGCTCGTTTATCAAAGA 58.311 36.000 0.00 0.00 0.00 2.52
69 70 6.952935 ACTTGACTAGCTCGTTTATCAAAG 57.047 37.500 0.00 0.00 0.00 2.77
70 71 7.823665 TCTACTTGACTAGCTCGTTTATCAAA 58.176 34.615 0.00 0.00 0.00 2.69
71 72 7.387119 TCTACTTGACTAGCTCGTTTATCAA 57.613 36.000 0.00 0.00 0.00 2.57
72 73 6.038382 CCTCTACTTGACTAGCTCGTTTATCA 59.962 42.308 0.00 0.00 0.00 2.15
73 74 6.432107 CCTCTACTTGACTAGCTCGTTTATC 58.568 44.000 0.00 0.00 0.00 1.75
74 75 5.221087 GCCTCTACTTGACTAGCTCGTTTAT 60.221 44.000 0.00 0.00 0.00 1.40
75 76 4.096081 GCCTCTACTTGACTAGCTCGTTTA 59.904 45.833 0.00 0.00 0.00 2.01
76 77 3.119424 GCCTCTACTTGACTAGCTCGTTT 60.119 47.826 0.00 0.00 0.00 3.60
77 78 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
78 79 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
79 80 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
80 81 4.825085 AGTATGCCTCTACTTGACTAGCTC 59.175 45.833 0.00 0.00 0.00 4.09
81 82 4.798882 AGTATGCCTCTACTTGACTAGCT 58.201 43.478 0.00 0.00 0.00 3.32
82 83 5.182380 CCTAGTATGCCTCTACTTGACTAGC 59.818 48.000 0.00 0.00 35.60 3.42
83 84 5.708230 CCCTAGTATGCCTCTACTTGACTAG 59.292 48.000 0.00 0.00 36.32 2.57
84 85 5.371769 TCCCTAGTATGCCTCTACTTGACTA 59.628 44.000 0.00 0.00 33.96 2.59
85 86 4.168283 TCCCTAGTATGCCTCTACTTGACT 59.832 45.833 0.00 0.00 33.96 3.41
86 87 4.471548 TCCCTAGTATGCCTCTACTTGAC 58.528 47.826 0.00 0.00 33.96 3.18
87 88 4.808767 TCCCTAGTATGCCTCTACTTGA 57.191 45.455 0.00 0.00 33.96 3.02
88 89 7.726033 ATTATCCCTAGTATGCCTCTACTTG 57.274 40.000 0.00 0.00 33.96 3.16
89 90 8.598041 CAAATTATCCCTAGTATGCCTCTACTT 58.402 37.037 0.00 0.00 33.96 2.24
90 91 7.735321 ACAAATTATCCCTAGTATGCCTCTACT 59.265 37.037 0.00 0.00 36.04 2.57
91 92 7.908453 ACAAATTATCCCTAGTATGCCTCTAC 58.092 38.462 0.00 0.00 0.00 2.59
92 93 8.506196 AACAAATTATCCCTAGTATGCCTCTA 57.494 34.615 0.00 0.00 0.00 2.43
93 94 7.394144 AACAAATTATCCCTAGTATGCCTCT 57.606 36.000 0.00 0.00 0.00 3.69
94 95 8.352942 CAAAACAAATTATCCCTAGTATGCCTC 58.647 37.037 0.00 0.00 0.00 4.70
95 96 7.839200 ACAAAACAAATTATCCCTAGTATGCCT 59.161 33.333 0.00 0.00 0.00 4.75
96 97 8.007405 ACAAAACAAATTATCCCTAGTATGCC 57.993 34.615 0.00 0.00 0.00 4.40
97 98 8.903820 AGACAAAACAAATTATCCCTAGTATGC 58.096 33.333 0.00 0.00 0.00 3.14
101 102 9.975218 ACATAGACAAAACAAATTATCCCTAGT 57.025 29.630 0.00 0.00 0.00 2.57
112 113 9.676195 CATGTGTGAATACATAGACAAAACAAA 57.324 29.630 0.00 0.00 39.17 2.83
113 114 8.845227 ACATGTGTGAATACATAGACAAAACAA 58.155 29.630 0.00 0.00 39.17 2.83
114 115 8.389779 ACATGTGTGAATACATAGACAAAACA 57.610 30.769 0.00 0.00 39.17 2.83
115 116 9.755064 GTACATGTGTGAATACATAGACAAAAC 57.245 33.333 9.11 0.00 39.17 2.43
116 117 9.719355 AGTACATGTGTGAATACATAGACAAAA 57.281 29.630 9.11 0.00 39.17 2.44
124 125 9.162764 GGAAACTTAGTACATGTGTGAATACAT 57.837 33.333 9.11 0.00 41.77 2.29
125 126 7.329962 CGGAAACTTAGTACATGTGTGAATACA 59.670 37.037 9.11 0.00 34.63 2.29
126 127 7.201496 CCGGAAACTTAGTACATGTGTGAATAC 60.201 40.741 9.11 0.00 0.00 1.89
127 128 6.814644 CCGGAAACTTAGTACATGTGTGAATA 59.185 38.462 9.11 0.00 0.00 1.75
128 129 5.642063 CCGGAAACTTAGTACATGTGTGAAT 59.358 40.000 9.11 0.00 0.00 2.57
129 130 4.992319 CCGGAAACTTAGTACATGTGTGAA 59.008 41.667 9.11 0.00 0.00 3.18
130 131 4.039488 ACCGGAAACTTAGTACATGTGTGA 59.961 41.667 9.46 0.00 0.00 3.58
131 132 4.312443 ACCGGAAACTTAGTACATGTGTG 58.688 43.478 9.46 0.00 0.00 3.82
132 133 4.612264 ACCGGAAACTTAGTACATGTGT 57.388 40.909 9.46 0.00 0.00 3.72
133 134 7.605410 ATTAACCGGAAACTTAGTACATGTG 57.395 36.000 9.46 0.00 0.00 3.21
134 135 8.313292 TGTATTAACCGGAAACTTAGTACATGT 58.687 33.333 9.46 2.69 0.00 3.21
135 136 8.706492 TGTATTAACCGGAAACTTAGTACATG 57.294 34.615 9.46 0.00 0.00 3.21
136 137 9.895138 ATTGTATTAACCGGAAACTTAGTACAT 57.105 29.630 9.46 2.28 29.53 2.29
137 138 9.723601 AATTGTATTAACCGGAAACTTAGTACA 57.276 29.630 9.46 10.88 28.23 2.90
139 140 9.086336 CGAATTGTATTAACCGGAAACTTAGTA 57.914 33.333 9.46 0.00 0.00 1.82
140 141 7.818930 TCGAATTGTATTAACCGGAAACTTAGT 59.181 33.333 9.46 0.00 0.00 2.24
141 142 8.188531 TCGAATTGTATTAACCGGAAACTTAG 57.811 34.615 9.46 0.00 0.00 2.18
142 143 7.818930 ACTCGAATTGTATTAACCGGAAACTTA 59.181 33.333 9.46 0.00 0.00 2.24
143 144 6.652062 ACTCGAATTGTATTAACCGGAAACTT 59.348 34.615 9.46 0.00 0.00 2.66
144 145 6.168389 ACTCGAATTGTATTAACCGGAAACT 58.832 36.000 9.46 0.00 0.00 2.66
145 146 6.413018 ACTCGAATTGTATTAACCGGAAAC 57.587 37.500 9.46 0.00 0.00 2.78
146 147 7.980662 TCATACTCGAATTGTATTAACCGGAAA 59.019 33.333 9.46 1.61 0.00 3.13
147 148 7.490840 TCATACTCGAATTGTATTAACCGGAA 58.509 34.615 9.46 0.00 0.00 4.30
148 149 7.041635 TCATACTCGAATTGTATTAACCGGA 57.958 36.000 9.46 0.00 0.00 5.14
149 150 7.703298 TTCATACTCGAATTGTATTAACCGG 57.297 36.000 0.00 0.00 0.00 5.28
224 225 4.349342 AGTGAAGGAAATATGCCCTAGAGG 59.651 45.833 0.00 0.00 39.47 3.69
225 226 5.512232 GGAGTGAAGGAAATATGCCCTAGAG 60.512 48.000 0.00 0.00 31.36 2.43
226 227 4.348168 GGAGTGAAGGAAATATGCCCTAGA 59.652 45.833 0.00 0.00 31.36 2.43
227 228 4.505742 GGGAGTGAAGGAAATATGCCCTAG 60.506 50.000 0.00 0.00 31.36 3.02
228 229 3.394606 GGGAGTGAAGGAAATATGCCCTA 59.605 47.826 0.00 0.00 31.36 3.53
229 230 2.175715 GGGAGTGAAGGAAATATGCCCT 59.824 50.000 0.00 0.00 0.00 5.19
230 231 2.587522 GGGAGTGAAGGAAATATGCCC 58.412 52.381 0.00 0.00 0.00 5.36
231 232 2.158813 TCGGGAGTGAAGGAAATATGCC 60.159 50.000 0.00 0.00 0.00 4.40
232 233 2.872858 GTCGGGAGTGAAGGAAATATGC 59.127 50.000 0.00 0.00 0.00 3.14
233 234 3.871594 GTGTCGGGAGTGAAGGAAATATG 59.128 47.826 0.00 0.00 0.00 1.78
234 235 3.775316 AGTGTCGGGAGTGAAGGAAATAT 59.225 43.478 0.00 0.00 0.00 1.28
235 236 3.056107 CAGTGTCGGGAGTGAAGGAAATA 60.056 47.826 0.00 0.00 0.00 1.40
236 237 1.978580 AGTGTCGGGAGTGAAGGAAAT 59.021 47.619 0.00 0.00 0.00 2.17
237 238 1.070134 CAGTGTCGGGAGTGAAGGAAA 59.930 52.381 0.00 0.00 0.00 3.13
238 239 0.679505 CAGTGTCGGGAGTGAAGGAA 59.320 55.000 0.00 0.00 0.00 3.36
239 240 1.816863 GCAGTGTCGGGAGTGAAGGA 61.817 60.000 0.00 0.00 0.00 3.36
240 241 1.374758 GCAGTGTCGGGAGTGAAGG 60.375 63.158 0.00 0.00 0.00 3.46
241 242 0.249868 TTGCAGTGTCGGGAGTGAAG 60.250 55.000 0.00 0.00 0.00 3.02
242 243 0.396435 ATTGCAGTGTCGGGAGTGAA 59.604 50.000 0.00 0.00 0.00 3.18
243 244 0.320683 CATTGCAGTGTCGGGAGTGA 60.321 55.000 0.13 0.00 0.00 3.41
244 245 1.300971 CCATTGCAGTGTCGGGAGTG 61.301 60.000 8.53 0.00 0.00 3.51
245 246 1.003355 CCATTGCAGTGTCGGGAGT 60.003 57.895 8.53 0.00 0.00 3.85
246 247 0.742281 CTCCATTGCAGTGTCGGGAG 60.742 60.000 8.53 3.83 36.33 4.30
247 248 1.296392 CTCCATTGCAGTGTCGGGA 59.704 57.895 8.53 0.00 0.00 5.14
248 249 2.401766 GCTCCATTGCAGTGTCGGG 61.402 63.158 8.53 0.00 0.00 5.14
249 250 2.743752 CGCTCCATTGCAGTGTCGG 61.744 63.158 8.53 0.00 0.00 4.79
250 251 2.780643 CGCTCCATTGCAGTGTCG 59.219 61.111 8.53 5.10 0.00 4.35
251 252 2.037136 AGCGCTCCATTGCAGTGTC 61.037 57.895 2.64 0.00 0.00 3.67
252 253 2.033141 AGCGCTCCATTGCAGTGT 59.967 55.556 2.64 0.00 0.00 3.55
253 254 2.483745 CAGCGCTCCATTGCAGTG 59.516 61.111 7.13 1.49 0.00 3.66
254 255 2.749044 CCAGCGCTCCATTGCAGT 60.749 61.111 7.13 0.00 0.00 4.40
255 256 2.749044 ACCAGCGCTCCATTGCAG 60.749 61.111 7.13 0.00 0.00 4.41
256 257 2.747460 GACCAGCGCTCCATTGCA 60.747 61.111 7.13 0.00 0.00 4.08
257 258 3.869272 CGACCAGCGCTCCATTGC 61.869 66.667 7.13 0.00 0.00 3.56
258 259 2.125552 TCGACCAGCGCTCCATTG 60.126 61.111 7.13 0.00 40.61 2.82
259 260 2.125512 GTCGACCAGCGCTCCATT 60.126 61.111 7.13 0.00 40.61 3.16
260 261 4.498520 CGTCGACCAGCGCTCCAT 62.499 66.667 7.13 0.00 40.61 3.41
287 288 4.598894 CCGGGAGCTGCATCGGAG 62.599 72.222 16.09 0.00 44.69 4.63
299 300 4.713735 TTCATTGCAGCGCCGGGA 62.714 61.111 2.29 0.00 0.00 5.14
300 301 4.183686 CTTCATTGCAGCGCCGGG 62.184 66.667 2.29 0.00 0.00 5.73
301 302 4.183686 CCTTCATTGCAGCGCCGG 62.184 66.667 2.29 0.00 0.00 6.13
302 303 4.842091 GCCTTCATTGCAGCGCCG 62.842 66.667 2.29 0.00 0.00 6.46
303 304 3.407046 GAGCCTTCATTGCAGCGCC 62.407 63.158 2.29 0.00 0.00 6.53
304 305 2.101770 GAGCCTTCATTGCAGCGC 59.898 61.111 0.00 0.00 0.00 5.92
305 306 2.402388 CGAGCCTTCATTGCAGCG 59.598 61.111 0.00 0.00 0.00 5.18
306 307 2.101770 GCGAGCCTTCATTGCAGC 59.898 61.111 0.00 0.00 0.00 5.25
307 308 2.796651 GGCGAGCCTTCATTGCAG 59.203 61.111 6.90 0.00 0.00 4.41
308 309 3.126879 CGGCGAGCCTTCATTGCA 61.127 61.111 12.70 0.00 0.00 4.08
309 310 3.880846 CCGGCGAGCCTTCATTGC 61.881 66.667 9.30 0.00 0.00 3.56
310 311 2.436646 ACCGGCGAGCCTTCATTG 60.437 61.111 9.30 0.00 0.00 2.82
311 312 2.436646 CACCGGCGAGCCTTCATT 60.437 61.111 9.30 0.00 0.00 2.57
312 313 3.254024 AACACCGGCGAGCCTTCAT 62.254 57.895 9.30 0.00 0.00 2.57
313 314 3.936203 AACACCGGCGAGCCTTCA 61.936 61.111 9.30 0.00 0.00 3.02
314 315 3.423154 CAACACCGGCGAGCCTTC 61.423 66.667 9.30 0.00 0.00 3.46
319 320 3.114616 CAGAGCAACACCGGCGAG 61.115 66.667 9.30 2.48 36.08 5.03
322 323 3.044059 GATGCAGAGCAACACCGGC 62.044 63.158 0.00 0.00 43.62 6.13
323 324 1.028330 ATGATGCAGAGCAACACCGG 61.028 55.000 0.00 0.00 43.50 5.28
324 325 0.098200 CATGATGCAGAGCAACACCG 59.902 55.000 4.06 0.00 43.50 4.94
325 326 0.179145 GCATGATGCAGAGCAACACC 60.179 55.000 13.36 0.00 43.50 4.16
326 327 3.324170 GCATGATGCAGAGCAACAC 57.676 52.632 13.36 0.00 43.50 3.32
336 337 2.891936 TCGTCCGCTGCATGATGC 60.892 61.111 11.12 11.12 45.29 3.91
337 338 2.863853 CGTCGTCCGCTGCATGATG 61.864 63.158 0.00 1.18 0.00 3.07
338 339 2.583319 CGTCGTCCGCTGCATGAT 60.583 61.111 0.00 0.00 0.00 2.45
339 340 4.050934 ACGTCGTCCGCTGCATGA 62.051 61.111 0.00 0.00 41.42 3.07
340 341 3.842126 CACGTCGTCCGCTGCATG 61.842 66.667 0.00 0.00 41.42 4.06
344 345 2.683859 TAGACCACGTCGTCCGCTG 61.684 63.158 9.84 0.00 41.42 5.18
345 346 2.359107 TAGACCACGTCGTCCGCT 60.359 61.111 9.84 0.00 41.42 5.52
346 347 2.202401 GTAGACCACGTCGTCCGC 60.202 66.667 9.84 0.00 41.42 5.54
347 348 1.134075 CAGTAGACCACGTCGTCCG 59.866 63.158 9.84 0.00 44.03 4.79
348 349 1.154073 GCAGTAGACCACGTCGTCC 60.154 63.158 9.84 0.00 37.67 4.79
349 350 0.728466 GTGCAGTAGACCACGTCGTC 60.728 60.000 5.03 5.03 37.67 4.20
350 351 1.285023 GTGCAGTAGACCACGTCGT 59.715 57.895 0.00 0.00 37.67 4.34
351 352 1.443872 GGTGCAGTAGACCACGTCG 60.444 63.158 0.00 0.00 37.67 5.12
352 353 1.443872 CGGTGCAGTAGACCACGTC 60.444 63.158 0.00 0.00 32.45 4.34
353 354 2.649034 CGGTGCAGTAGACCACGT 59.351 61.111 0.00 0.00 32.45 4.49
354 355 2.126071 CCGGTGCAGTAGACCACG 60.126 66.667 0.00 0.00 32.45 4.94
355 356 2.434359 GCCGGTGCAGTAGACCAC 60.434 66.667 1.90 0.00 37.47 4.16
356 357 4.063967 CGCCGGTGCAGTAGACCA 62.064 66.667 0.00 0.00 37.32 4.02
357 358 3.755628 TCGCCGGTGCAGTAGACC 61.756 66.667 11.05 0.00 37.32 3.85
358 359 2.506438 GTCGCCGGTGCAGTAGAC 60.506 66.667 11.05 0.00 37.32 2.59
359 360 3.755628 GGTCGCCGGTGCAGTAGA 61.756 66.667 11.05 0.00 37.32 2.59
360 361 3.989698 CTGGTCGCCGGTGCAGTAG 62.990 68.421 11.05 2.06 37.32 2.57
361 362 4.063967 CTGGTCGCCGGTGCAGTA 62.064 66.667 11.05 0.00 37.32 2.74
363 364 3.989698 CTACTGGTCGCCGGTGCAG 62.990 68.421 17.83 17.83 43.80 4.41
364 365 4.063967 CTACTGGTCGCCGGTGCA 62.064 66.667 11.05 2.21 43.80 4.57
366 367 2.852495 AATGCTACTGGTCGCCGGTG 62.852 60.000 9.28 9.28 43.80 4.94
367 368 2.656069 AATGCTACTGGTCGCCGGT 61.656 57.895 13.68 13.68 46.08 5.28
368 369 2.173669 CAATGCTACTGGTCGCCGG 61.174 63.158 0.00 0.00 35.68 6.13
369 370 2.173669 CCAATGCTACTGGTCGCCG 61.174 63.158 0.00 0.00 0.00 6.46
370 371 2.472909 GCCAATGCTACTGGTCGCC 61.473 63.158 2.01 0.00 36.24 5.54
371 372 2.813179 CGCCAATGCTACTGGTCGC 61.813 63.158 2.01 0.00 36.24 5.19
372 373 2.813179 GCGCCAATGCTACTGGTCG 61.813 63.158 0.00 9.76 36.24 4.79
373 374 2.472909 GGCGCCAATGCTACTGGTC 61.473 63.158 24.80 0.00 36.24 4.02
374 375 2.438434 GGCGCCAATGCTACTGGT 60.438 61.111 24.80 0.00 36.24 4.00
375 376 3.576356 CGGCGCCAATGCTACTGG 61.576 66.667 28.98 0.98 36.99 4.00
376 377 4.241999 GCGGCGCCAATGCTACTG 62.242 66.667 28.98 7.61 34.43 2.74
397 398 3.060020 CTTGCCCCTGATTGCAGCG 62.060 63.158 0.00 0.00 40.91 5.18
398 399 2.890371 CTTGCCCCTGATTGCAGC 59.110 61.111 0.00 0.00 40.91 5.25
399 400 2.890371 GCTTGCCCCTGATTGCAG 59.110 61.111 0.00 0.00 38.95 4.41
400 401 3.063704 CGCTTGCCCCTGATTGCA 61.064 61.111 0.00 0.00 35.27 4.08
401 402 3.830192 CCGCTTGCCCCTGATTGC 61.830 66.667 0.00 0.00 0.00 3.56
402 403 3.142838 CCCGCTTGCCCCTGATTG 61.143 66.667 0.00 0.00 0.00 2.67
403 404 3.661648 ACCCGCTTGCCCCTGATT 61.662 61.111 0.00 0.00 0.00 2.57
404 405 4.431131 CACCCGCTTGCCCCTGAT 62.431 66.667 0.00 0.00 0.00 2.90
415 416 2.661537 GCAAAAACAGCCACCCGC 60.662 61.111 0.00 0.00 37.98 6.13
422 423 2.158841 TCTTCGTATCGGCAAAAACAGC 59.841 45.455 0.00 0.00 0.00 4.40
423 424 3.678072 TCTCTTCGTATCGGCAAAAACAG 59.322 43.478 0.00 0.00 0.00 3.16
424 425 3.655486 TCTCTTCGTATCGGCAAAAACA 58.345 40.909 0.00 0.00 0.00 2.83
425 426 3.924686 TCTCTCTTCGTATCGGCAAAAAC 59.075 43.478 0.00 0.00 0.00 2.43
426 427 4.174009 CTCTCTCTTCGTATCGGCAAAAA 58.826 43.478 0.00 0.00 0.00 1.94
427 428 3.192844 ACTCTCTCTTCGTATCGGCAAAA 59.807 43.478 0.00 0.00 0.00 2.44
428 429 2.753452 ACTCTCTCTTCGTATCGGCAAA 59.247 45.455 0.00 0.00 0.00 3.68
429 430 2.097629 CACTCTCTCTTCGTATCGGCAA 59.902 50.000 0.00 0.00 0.00 4.52
430 431 1.671328 CACTCTCTCTTCGTATCGGCA 59.329 52.381 0.00 0.00 0.00 5.69
431 432 1.941294 TCACTCTCTCTTCGTATCGGC 59.059 52.381 0.00 0.00 0.00 5.54
432 433 3.608241 GCATCACTCTCTCTTCGTATCGG 60.608 52.174 0.00 0.00 0.00 4.18
433 434 3.249799 AGCATCACTCTCTCTTCGTATCG 59.750 47.826 0.00 0.00 0.00 2.92
434 435 4.829064 AGCATCACTCTCTCTTCGTATC 57.171 45.455 0.00 0.00 0.00 2.24
435 436 4.202101 CCAAGCATCACTCTCTCTTCGTAT 60.202 45.833 0.00 0.00 0.00 3.06
436 437 3.129462 CCAAGCATCACTCTCTCTTCGTA 59.871 47.826 0.00 0.00 0.00 3.43
437 438 2.094286 CCAAGCATCACTCTCTCTTCGT 60.094 50.000 0.00 0.00 0.00 3.85
438 439 2.538437 CCAAGCATCACTCTCTCTTCG 58.462 52.381 0.00 0.00 0.00 3.79
439 440 2.499289 TCCCAAGCATCACTCTCTCTTC 59.501 50.000 0.00 0.00 0.00 2.87
440 441 2.500910 CTCCCAAGCATCACTCTCTCTT 59.499 50.000 0.00 0.00 0.00 2.85
441 442 2.109774 CTCCCAAGCATCACTCTCTCT 58.890 52.381 0.00 0.00 0.00 3.10
442 443 1.138661 CCTCCCAAGCATCACTCTCTC 59.861 57.143 0.00 0.00 0.00 3.20
443 444 1.202330 CCTCCCAAGCATCACTCTCT 58.798 55.000 0.00 0.00 0.00 3.10
444 445 0.179936 CCCTCCCAAGCATCACTCTC 59.820 60.000 0.00 0.00 0.00 3.20
445 446 1.277580 CCCCTCCCAAGCATCACTCT 61.278 60.000 0.00 0.00 0.00 3.24
446 447 1.225704 CCCCTCCCAAGCATCACTC 59.774 63.158 0.00 0.00 0.00 3.51
447 448 2.311854 CCCCCTCCCAAGCATCACT 61.312 63.158 0.00 0.00 0.00 3.41
448 449 2.276740 CCCCCTCCCAAGCATCAC 59.723 66.667 0.00 0.00 0.00 3.06
449 450 3.743017 GCCCCCTCCCAAGCATCA 61.743 66.667 0.00 0.00 0.00 3.07
450 451 4.883354 CGCCCCCTCCCAAGCATC 62.883 72.222 0.00 0.00 0.00 3.91
454 455 4.722700 CACACGCCCCCTCCCAAG 62.723 72.222 0.00 0.00 0.00 3.61
464 465 4.687215 TCTCCTGCAGCACACGCC 62.687 66.667 8.66 0.00 39.83 5.68
465 466 3.117171 CTCTCCTGCAGCACACGC 61.117 66.667 8.66 0.00 38.99 5.34
466 467 3.117171 GCTCTCCTGCAGCACACG 61.117 66.667 8.66 0.00 36.82 4.49
467 468 2.031616 TGCTCTCCTGCAGCACAC 59.968 61.111 8.66 0.00 42.09 3.82
471 472 1.096386 CCTGAATGCTCTCCTGCAGC 61.096 60.000 8.66 0.00 46.71 5.25
472 473 0.540454 TCCTGAATGCTCTCCTGCAG 59.460 55.000 6.78 6.78 46.71 4.41
474 475 1.377536 GTTCCTGAATGCTCTCCTGC 58.622 55.000 0.00 0.00 0.00 4.85
475 476 1.280133 TGGTTCCTGAATGCTCTCCTG 59.720 52.381 0.00 0.00 0.00 3.86
476 477 1.558756 CTGGTTCCTGAATGCTCTCCT 59.441 52.381 0.00 0.00 0.00 3.69
477 478 1.556911 TCTGGTTCCTGAATGCTCTCC 59.443 52.381 0.00 0.00 0.00 3.71
478 479 2.419851 CCTCTGGTTCCTGAATGCTCTC 60.420 54.545 0.56 0.00 0.00 3.20
479 480 1.558756 CCTCTGGTTCCTGAATGCTCT 59.441 52.381 0.56 0.00 0.00 4.09
480 481 1.407989 CCCTCTGGTTCCTGAATGCTC 60.408 57.143 0.56 0.00 0.00 4.26
481 482 0.622665 CCCTCTGGTTCCTGAATGCT 59.377 55.000 0.56 0.00 0.00 3.79
482 483 1.034292 GCCCTCTGGTTCCTGAATGC 61.034 60.000 0.56 2.75 0.00 3.56
483 484 0.329261 TGCCCTCTGGTTCCTGAATG 59.671 55.000 0.56 0.00 0.00 2.67
484 485 1.075601 TTGCCCTCTGGTTCCTGAAT 58.924 50.000 0.56 0.00 0.00 2.57
485 486 0.850100 TTTGCCCTCTGGTTCCTGAA 59.150 50.000 0.56 0.00 0.00 3.02
486 487 0.401738 CTTTGCCCTCTGGTTCCTGA 59.598 55.000 0.00 0.00 0.00 3.86
487 488 0.610232 CCTTTGCCCTCTGGTTCCTG 60.610 60.000 0.00 0.00 0.00 3.86
488 489 1.770324 CCTTTGCCCTCTGGTTCCT 59.230 57.895 0.00 0.00 0.00 3.36
489 490 1.304464 CCCTTTGCCCTCTGGTTCC 60.304 63.158 0.00 0.00 0.00 3.62
490 491 0.609406 GTCCCTTTGCCCTCTGGTTC 60.609 60.000 0.00 0.00 0.00 3.62
491 492 1.460699 GTCCCTTTGCCCTCTGGTT 59.539 57.895 0.00 0.00 0.00 3.67
492 493 2.895424 CGTCCCTTTGCCCTCTGGT 61.895 63.158 0.00 0.00 0.00 4.00
493 494 2.045926 CGTCCCTTTGCCCTCTGG 60.046 66.667 0.00 0.00 0.00 3.86
494 495 2.045926 CCGTCCCTTTGCCCTCTG 60.046 66.667 0.00 0.00 0.00 3.35
495 496 4.035102 GCCGTCCCTTTGCCCTCT 62.035 66.667 0.00 0.00 0.00 3.69
496 497 4.035102 AGCCGTCCCTTTGCCCTC 62.035 66.667 0.00 0.00 0.00 4.30
497 498 4.351054 CAGCCGTCCCTTTGCCCT 62.351 66.667 0.00 0.00 0.00 5.19
501 502 2.436646 ATCGCAGCCGTCCCTTTG 60.437 61.111 0.00 0.00 35.54 2.77
502 503 2.436646 CATCGCAGCCGTCCCTTT 60.437 61.111 0.00 0.00 35.54 3.11
503 504 4.473520 CCATCGCAGCCGTCCCTT 62.474 66.667 0.00 0.00 35.54 3.95
510 511 2.588877 ATACGCACCATCGCAGCC 60.589 61.111 0.00 0.00 0.00 4.85
511 512 0.318699 TAGATACGCACCATCGCAGC 60.319 55.000 0.00 0.00 0.00 5.25
512 513 1.691127 CTAGATACGCACCATCGCAG 58.309 55.000 0.00 0.00 0.00 5.18
513 514 0.318699 GCTAGATACGCACCATCGCA 60.319 55.000 0.00 0.00 0.00 5.10
514 515 1.337817 CGCTAGATACGCACCATCGC 61.338 60.000 0.00 0.00 0.00 4.58
515 516 0.729478 CCGCTAGATACGCACCATCG 60.729 60.000 0.00 0.00 0.00 3.84
516 517 1.009389 GCCGCTAGATACGCACCATC 61.009 60.000 0.00 0.00 0.00 3.51
517 518 1.006102 GCCGCTAGATACGCACCAT 60.006 57.895 0.00 0.00 0.00 3.55
518 519 0.820482 TAGCCGCTAGATACGCACCA 60.820 55.000 0.00 0.00 0.00 4.17
519 520 0.526662 ATAGCCGCTAGATACGCACC 59.473 55.000 6.23 0.00 0.00 5.01
520 521 1.618861 CATAGCCGCTAGATACGCAC 58.381 55.000 6.23 0.00 0.00 5.34
521 522 0.526211 CCATAGCCGCTAGATACGCA 59.474 55.000 6.23 0.00 0.00 5.24
522 523 0.809385 TCCATAGCCGCTAGATACGC 59.191 55.000 6.23 0.00 0.00 4.42
523 524 1.402259 CCTCCATAGCCGCTAGATACG 59.598 57.143 6.23 0.00 0.00 3.06
524 525 1.135333 GCCTCCATAGCCGCTAGATAC 59.865 57.143 6.23 0.00 0.00 2.24
525 526 1.475403 GCCTCCATAGCCGCTAGATA 58.525 55.000 6.23 0.00 0.00 1.98
526 527 1.599606 CGCCTCCATAGCCGCTAGAT 61.600 60.000 6.23 0.00 0.00 1.98
527 528 2.268802 CGCCTCCATAGCCGCTAGA 61.269 63.158 6.23 0.00 0.00 2.43
528 529 2.259818 CGCCTCCATAGCCGCTAG 59.740 66.667 6.23 0.00 0.00 3.42
529 530 3.303135 CCGCCTCCATAGCCGCTA 61.303 66.667 1.73 1.73 0.00 4.26
532 533 2.172483 ATAAGCCGCCTCCATAGCCG 62.172 60.000 0.00 0.00 0.00 5.52
533 534 0.674895 CATAAGCCGCCTCCATAGCC 60.675 60.000 0.00 0.00 0.00 3.93
534 535 0.035458 ACATAAGCCGCCTCCATAGC 59.965 55.000 0.00 0.00 0.00 2.97
535 536 2.550830 AACATAAGCCGCCTCCATAG 57.449 50.000 0.00 0.00 0.00 2.23
536 537 2.486548 GGAAACATAAGCCGCCTCCATA 60.487 50.000 0.00 0.00 0.00 2.74
537 538 1.680338 GAAACATAAGCCGCCTCCAT 58.320 50.000 0.00 0.00 0.00 3.41
538 539 0.393808 GGAAACATAAGCCGCCTCCA 60.394 55.000 0.00 0.00 0.00 3.86
539 540 1.101635 GGGAAACATAAGCCGCCTCC 61.102 60.000 0.00 0.00 0.00 4.30
540 541 0.393808 TGGGAAACATAAGCCGCCTC 60.394 55.000 0.00 0.00 0.00 4.70
541 542 0.258774 ATGGGAAACATAAGCCGCCT 59.741 50.000 0.00 0.00 38.26 5.52
542 543 1.975660 TATGGGAAACATAAGCCGCC 58.024 50.000 0.00 0.00 39.06 6.13
549 550 5.756918 TCCGGTTGATTTATGGGAAACATA 58.243 37.500 0.00 0.00 41.03 2.29
550 551 4.605183 TCCGGTTGATTTATGGGAAACAT 58.395 39.130 0.00 0.00 43.68 2.71
551 552 4.035612 TCCGGTTGATTTATGGGAAACA 57.964 40.909 0.00 0.00 0.00 2.83
552 553 4.642885 TCATCCGGTTGATTTATGGGAAAC 59.357 41.667 11.25 0.00 0.00 2.78
553 554 4.861196 TCATCCGGTTGATTTATGGGAAA 58.139 39.130 11.25 0.00 0.00 3.13
554 555 4.511786 TCATCCGGTTGATTTATGGGAA 57.488 40.909 11.25 0.00 0.00 3.97
555 556 4.722526 ATCATCCGGTTGATTTATGGGA 57.277 40.909 20.16 0.00 32.38 4.37
562 563 4.269183 TGCTACAAATCATCCGGTTGATT 58.731 39.130 27.69 27.69 45.85 2.57
563 564 3.879295 CTGCTACAAATCATCCGGTTGAT 59.121 43.478 20.16 20.16 37.96 2.57
564 565 3.270027 CTGCTACAAATCATCCGGTTGA 58.730 45.455 17.29 17.29 0.00 3.18
565 566 3.009723 ACTGCTACAAATCATCCGGTTG 58.990 45.455 6.15 6.15 0.00 3.77
566 567 3.009723 CACTGCTACAAATCATCCGGTT 58.990 45.455 0.00 0.00 0.00 4.44
567 568 2.632377 CACTGCTACAAATCATCCGGT 58.368 47.619 0.00 0.00 0.00 5.28
568 569 1.942657 CCACTGCTACAAATCATCCGG 59.057 52.381 0.00 0.00 0.00 5.14
569 570 1.331756 GCCACTGCTACAAATCATCCG 59.668 52.381 0.00 0.00 33.53 4.18
570 571 1.678101 GGCCACTGCTACAAATCATCC 59.322 52.381 0.00 0.00 37.74 3.51
571 572 2.368439 TGGCCACTGCTACAAATCATC 58.632 47.619 0.00 0.00 37.74 2.92
572 573 2.512692 TGGCCACTGCTACAAATCAT 57.487 45.000 0.00 0.00 37.74 2.45
573 574 2.284754 TTGGCCACTGCTACAAATCA 57.715 45.000 3.88 0.00 37.74 2.57
574 575 2.819608 TCTTTGGCCACTGCTACAAATC 59.180 45.455 3.88 0.00 37.74 2.17
575 576 2.875296 TCTTTGGCCACTGCTACAAAT 58.125 42.857 3.88 0.00 37.74 2.32
576 577 2.356665 TCTTTGGCCACTGCTACAAA 57.643 45.000 3.88 0.00 37.74 2.83
577 578 2.356665 TTCTTTGGCCACTGCTACAA 57.643 45.000 3.88 0.00 37.74 2.41
578 579 2.356665 TTTCTTTGGCCACTGCTACA 57.643 45.000 3.88 0.00 37.74 2.74
579 580 3.726291 TTTTTCTTTGGCCACTGCTAC 57.274 42.857 3.88 0.00 37.74 3.58
596 597 7.701078 GCGTTTTCTTCTTCTAGTTTCCTTTTT 59.299 33.333 0.00 0.00 0.00 1.94
597 598 7.148137 TGCGTTTTCTTCTTCTAGTTTCCTTTT 60.148 33.333 0.00 0.00 0.00 2.27
598 599 6.317893 TGCGTTTTCTTCTTCTAGTTTCCTTT 59.682 34.615 0.00 0.00 0.00 3.11
599 600 5.820947 TGCGTTTTCTTCTTCTAGTTTCCTT 59.179 36.000 0.00 0.00 0.00 3.36
600 601 5.236695 GTGCGTTTTCTTCTTCTAGTTTCCT 59.763 40.000 0.00 0.00 0.00 3.36
601 602 5.236695 AGTGCGTTTTCTTCTTCTAGTTTCC 59.763 40.000 0.00 0.00 0.00 3.13
602 603 6.288426 AGTGCGTTTTCTTCTTCTAGTTTC 57.712 37.500 0.00 0.00 0.00 2.78
603 604 6.759827 TGTAGTGCGTTTTCTTCTTCTAGTTT 59.240 34.615 0.00 0.00 0.00 2.66
604 605 6.278363 TGTAGTGCGTTTTCTTCTTCTAGTT 58.722 36.000 0.00 0.00 0.00 2.24
605 606 5.839621 TGTAGTGCGTTTTCTTCTTCTAGT 58.160 37.500 0.00 0.00 0.00 2.57
606 607 5.921408 ACTGTAGTGCGTTTTCTTCTTCTAG 59.079 40.000 0.00 0.00 0.00 2.43
607 608 5.839621 ACTGTAGTGCGTTTTCTTCTTCTA 58.160 37.500 0.00 0.00 0.00 2.10
608 609 4.694339 ACTGTAGTGCGTTTTCTTCTTCT 58.306 39.130 0.00 0.00 0.00 2.85
609 610 5.405331 AACTGTAGTGCGTTTTCTTCTTC 57.595 39.130 0.00 0.00 0.00 2.87
610 611 4.272748 GGAACTGTAGTGCGTTTTCTTCTT 59.727 41.667 0.00 0.00 0.00 2.52
611 612 3.808174 GGAACTGTAGTGCGTTTTCTTCT 59.192 43.478 0.00 0.00 0.00 2.85
612 613 3.808174 AGGAACTGTAGTGCGTTTTCTTC 59.192 43.478 0.00 0.00 37.18 2.87
613 614 3.805207 AGGAACTGTAGTGCGTTTTCTT 58.195 40.909 0.00 0.00 37.18 2.52
614 615 3.470645 AGGAACTGTAGTGCGTTTTCT 57.529 42.857 0.00 0.00 37.18 2.52
615 616 5.662211 TTTAGGAACTGTAGTGCGTTTTC 57.338 39.130 0.00 0.00 41.52 2.29
616 617 5.048991 CCATTTAGGAACTGTAGTGCGTTTT 60.049 40.000 0.00 0.00 41.52 2.43
617 618 4.454504 CCATTTAGGAACTGTAGTGCGTTT 59.545 41.667 0.00 0.00 41.52 3.60
618 619 4.000988 CCATTTAGGAACTGTAGTGCGTT 58.999 43.478 0.00 0.00 41.52 4.84
619 620 3.596214 CCATTTAGGAACTGTAGTGCGT 58.404 45.455 0.00 0.00 41.52 5.24
620 621 2.936498 CCCATTTAGGAACTGTAGTGCG 59.064 50.000 0.00 0.00 41.52 5.34
627 628 2.514458 ACTGGCCCATTTAGGAACTG 57.486 50.000 0.00 0.00 41.52 3.16
638 639 1.971505 CTCGCCTATGAACTGGCCCA 61.972 60.000 0.00 0.00 45.90 5.36
649 650 2.104331 CGAACCACGCTCGCCTAT 59.896 61.111 0.00 0.00 34.51 2.57
723 724 6.937886 AAAACAAGTTACCGACTTTTGTTG 57.062 33.333 2.15 0.00 46.34 3.33
724 725 7.372714 AGAAAAACAAGTTACCGACTTTTGTT 58.627 30.769 0.00 0.00 46.34 2.83
725 726 6.916440 AGAAAAACAAGTTACCGACTTTTGT 58.084 32.000 0.00 0.00 46.34 2.83
726 727 7.024768 TGAGAAAAACAAGTTACCGACTTTTG 58.975 34.615 0.00 0.00 46.34 2.44
727 728 7.148355 TGAGAAAAACAAGTTACCGACTTTT 57.852 32.000 0.00 0.00 46.34 2.27
728 729 6.746745 TGAGAAAAACAAGTTACCGACTTT 57.253 33.333 0.00 0.00 46.34 2.66
730 731 5.644636 TGTTGAGAAAAACAAGTTACCGACT 59.355 36.000 0.00 0.00 41.47 4.18
731 732 5.871539 TGTTGAGAAAAACAAGTTACCGAC 58.128 37.500 0.00 0.00 37.12 4.79
732 733 6.497785 TTGTTGAGAAAAACAAGTTACCGA 57.502 33.333 0.00 0.00 43.34 4.69
756 761 6.458210 TCCGTAACGATTTCCTAGTTTTCTT 58.542 36.000 0.00 0.00 0.00 2.52
758 763 6.710692 TTCCGTAACGATTTCCTAGTTTTC 57.289 37.500 0.00 0.00 0.00 2.29
799 804 0.879400 CCTGCCTGATGAGACGATGC 60.879 60.000 0.00 0.00 0.00 3.91
849 860 6.590357 ACGATTTGCACGATTTATATAGCAC 58.410 36.000 1.86 0.00 34.70 4.40
928 943 1.403780 CGAGGACGTTAGGGGTTTGAG 60.404 57.143 0.00 0.00 34.56 3.02
952 967 1.709760 CACGTGCTAATGCTGTCGG 59.290 57.895 0.82 0.00 40.48 4.79
1305 1343 3.119101 TCGGAATCTACTTGTCTTGGAGC 60.119 47.826 0.00 0.00 0.00 4.70
1363 1401 5.119694 GCCAAAACCAAACCAATTTAGACA 58.880 37.500 0.00 0.00 0.00 3.41
1366 1404 4.024133 GCTGCCAAAACCAAACCAATTTAG 60.024 41.667 0.00 0.00 0.00 1.85
1650 1688 1.829096 TCCACGTCCACGAACTCCA 60.829 57.895 6.03 0.00 43.02 3.86
1651 1689 1.372623 GTCCACGTCCACGAACTCC 60.373 63.158 6.03 0.00 43.02 3.85
1719 1757 4.527944 GCATGGGATGATGAGATGATGAT 58.472 43.478 0.00 0.00 0.00 2.45
1720 1758 3.308188 GGCATGGGATGATGAGATGATGA 60.308 47.826 0.00 0.00 0.00 2.92
1721 1759 3.017442 GGCATGGGATGATGAGATGATG 58.983 50.000 0.00 0.00 0.00 3.07
1728 1774 0.186386 TGCATGGCATGGGATGATGA 59.814 50.000 27.48 0.00 31.71 2.92
1729 1775 2.740121 TGCATGGCATGGGATGATG 58.260 52.632 27.48 2.71 31.71 3.07
1767 1813 3.257375 TCAAACACAGACACGCTAGGTAT 59.743 43.478 0.00 0.00 0.00 2.73
1770 1816 2.148916 TCAAACACAGACACGCTAGG 57.851 50.000 0.00 0.00 0.00 3.02
1778 1824 3.558505 GCACACATCATCAAACACAGAC 58.441 45.455 0.00 0.00 0.00 3.51
1799 1845 0.439985 CAAGCAAGACACACGATCGG 59.560 55.000 20.98 10.92 0.00 4.18
1830 1877 0.403655 TTATCCTGCACAGCACCCAA 59.596 50.000 0.00 0.00 33.79 4.12
2020 2079 2.047560 GTTGCGTAAGAGGCCGGT 60.048 61.111 1.90 0.00 43.02 5.28
2112 2171 2.083522 GTCGTCGTCAGCAGTCTGC 61.084 63.158 17.48 17.48 45.46 4.26
2139 2198 0.693767 AGGGCTCCAGATCAGGAAGG 60.694 60.000 8.36 0.00 37.20 3.46
2140 2199 0.758123 GAGGGCTCCAGATCAGGAAG 59.242 60.000 8.36 4.12 37.20 3.46
2141 2200 1.045350 CGAGGGCTCCAGATCAGGAA 61.045 60.000 8.36 0.00 37.20 3.36
2144 2203 0.179089 CAACGAGGGCTCCAGATCAG 60.179 60.000 0.00 0.00 0.00 2.90
2162 2221 1.668751 GGTCAAAACTGTTCACGCTCA 59.331 47.619 0.00 0.00 0.00 4.26
2166 2225 2.384382 GCATGGTCAAAACTGTTCACG 58.616 47.619 0.00 0.00 0.00 4.35
2168 2227 2.665165 AGGCATGGTCAAAACTGTTCA 58.335 42.857 0.00 0.00 0.00 3.18
2192 2251 1.751927 CATGGGTCAGGCCTGAAGC 60.752 63.158 36.66 26.74 41.85 3.86
2193 2252 1.077212 CCATGGGTCAGGCCTGAAG 60.077 63.158 36.66 21.88 41.85 3.02
2194 2253 2.615465 CCCATGGGTCAGGCCTGAA 61.615 63.158 36.66 22.36 41.85 3.02
2196 2255 4.828296 GCCCATGGGTCAGGCCTG 62.828 72.222 31.58 27.87 41.00 4.85
2199 2258 4.828296 CAGGCCCATGGGTCAGGC 62.828 72.222 36.38 20.15 43.56 4.85
2200 2259 4.133373 CCAGGCCCATGGGTCAGG 62.133 72.222 36.38 33.35 43.56 3.86
2201 2260 2.615465 TTCCAGGCCCATGGGTCAG 61.615 63.158 36.38 28.62 43.56 3.51
2205 2264 3.350163 AGGTTCCAGGCCCATGGG 61.350 66.667 27.87 27.87 41.01 4.00
2231 2290 1.794714 ATCAGTATCGGTGGCCTCTT 58.205 50.000 3.32 0.00 0.00 2.85
2237 2296 0.600255 GGGCGAATCAGTATCGGTGG 60.600 60.000 0.00 0.00 40.54 4.61
2274 2333 1.528542 CGGATCAGGGTCGCTAGGA 60.529 63.158 0.00 0.00 0.00 2.94
2277 2336 1.235281 CGATCGGATCAGGGTCGCTA 61.235 60.000 17.53 0.00 0.00 4.26
2295 2354 4.547367 GGTTCCGATGGGGGCTCG 62.547 72.222 0.00 0.00 36.01 5.03
2299 2358 3.015145 AGGTGGTTCCGATGGGGG 61.015 66.667 0.00 0.00 41.99 5.40
2304 2363 2.045926 GCAGCAGGTGGTTCCGAT 60.046 61.111 0.86 0.00 41.99 4.18
2335 2397 1.067821 GGGAGGATCAGTGACGACATC 59.932 57.143 0.00 0.00 36.25 3.06
2393 2455 4.144555 GTGTTCTTTTCTCTTGCGAATCG 58.855 43.478 0.00 0.00 0.00 3.34
2489 2551 3.008049 ACAGATTTAGTTCTGGCCGTCTT 59.992 43.478 0.00 0.00 46.04 3.01
2499 2561 9.319143 ACTCTATGCATTACACAGATTTAGTTC 57.681 33.333 3.54 0.00 0.00 3.01
2506 2568 7.658982 CCAATGTACTCTATGCATTACACAGAT 59.341 37.037 3.54 0.00 41.23 2.90
2542 2604 8.986991 TGGACCAAAAACCTTGCATATAATAAT 58.013 29.630 0.00 0.00 0.00 1.28
2543 2605 8.367660 TGGACCAAAAACCTTGCATATAATAA 57.632 30.769 0.00 0.00 0.00 1.40
2544 2606 7.617723 ACTGGACCAAAAACCTTGCATATAATA 59.382 33.333 0.00 0.00 0.00 0.98
2545 2607 6.440328 ACTGGACCAAAAACCTTGCATATAAT 59.560 34.615 0.00 0.00 0.00 1.28
2546 2608 5.777732 ACTGGACCAAAAACCTTGCATATAA 59.222 36.000 0.00 0.00 0.00 0.98
2547 2609 5.329399 ACTGGACCAAAAACCTTGCATATA 58.671 37.500 0.00 0.00 0.00 0.86
2548 2610 4.159557 ACTGGACCAAAAACCTTGCATAT 58.840 39.130 0.00 0.00 0.00 1.78
2549 2611 3.571590 ACTGGACCAAAAACCTTGCATA 58.428 40.909 0.00 0.00 0.00 3.14
2550 2612 2.397597 ACTGGACCAAAAACCTTGCAT 58.602 42.857 0.00 0.00 0.00 3.96
2551 2613 1.859302 ACTGGACCAAAAACCTTGCA 58.141 45.000 0.00 0.00 0.00 4.08
2552 2614 2.979814 AACTGGACCAAAAACCTTGC 57.020 45.000 0.00 0.00 0.00 4.01
2553 2615 4.826556 TCAAAACTGGACCAAAAACCTTG 58.173 39.130 0.00 0.00 0.00 3.61
2554 2616 5.692115 ATCAAAACTGGACCAAAAACCTT 57.308 34.783 0.00 0.00 0.00 3.50
2555 2617 5.304357 CCTATCAAAACTGGACCAAAAACCT 59.696 40.000 0.00 0.00 0.00 3.50
2556 2618 5.538118 CCTATCAAAACTGGACCAAAAACC 58.462 41.667 0.00 0.00 0.00 3.27
2557 2619 4.988540 GCCTATCAAAACTGGACCAAAAAC 59.011 41.667 0.00 0.00 0.00 2.43
2558 2620 4.039852 GGCCTATCAAAACTGGACCAAAAA 59.960 41.667 0.00 0.00 0.00 1.94
2559 2621 3.576550 GGCCTATCAAAACTGGACCAAAA 59.423 43.478 0.00 0.00 0.00 2.44
2560 2622 3.161866 GGCCTATCAAAACTGGACCAAA 58.838 45.455 0.00 0.00 0.00 3.28
2566 2628 3.764885 CGAAAGGCCTATCAAAACTGG 57.235 47.619 5.16 0.00 0.00 4.00
2592 2696 6.085416 ACCTATCTTATCTTTGTCCTAGGGG 58.915 44.000 9.46 0.00 30.91 4.79
2611 2715 4.634443 GGTTGCGAAGACACATAAACCTAT 59.366 41.667 0.00 0.00 34.18 2.57
2641 2762 2.554032 ACTGCAACATGCTAACCAGTTC 59.446 45.455 3.78 0.00 45.31 3.01
2648 2769 6.200665 GTCAAAATTTCACTGCAACATGCTAA 59.799 34.615 3.78 0.00 45.31 3.09
2652 2773 5.970140 TGTCAAAATTTCACTGCAACATG 57.030 34.783 0.00 0.00 0.00 3.21
2660 2781 6.701400 GCACCTATTGTTGTCAAAATTTCACT 59.299 34.615 0.00 0.00 37.11 3.41
2672 2793 5.713025 CAGCAAATTAGCACCTATTGTTGT 58.287 37.500 0.00 0.00 36.85 3.32
2699 2820 7.071196 TGGACTCTTAAATATGTACTGCTCCAT 59.929 37.037 0.00 0.00 0.00 3.41
2723 2844 5.656416 ACCACCATTGTCCAAGTTATTATGG 59.344 40.000 0.00 0.00 37.62 2.74
2727 2848 4.766891 CAGACCACCATTGTCCAAGTTATT 59.233 41.667 0.00 0.00 33.09 1.40
2729 2850 3.137544 ACAGACCACCATTGTCCAAGTTA 59.862 43.478 0.00 0.00 33.09 2.24
2731 2852 1.494721 ACAGACCACCATTGTCCAAGT 59.505 47.619 0.00 0.00 33.09 3.16
2732 2853 2.276732 ACAGACCACCATTGTCCAAG 57.723 50.000 0.00 0.00 33.09 3.61
2733 2854 2.692557 CAAACAGACCACCATTGTCCAA 59.307 45.455 0.00 0.00 33.09 3.53
2738 2859 0.039256 CGCCAAACAGACCACCATTG 60.039 55.000 0.00 0.00 0.00 2.82
2756 2880 2.855180 CTAAATTCCAGCACAAGCACG 58.145 47.619 0.00 0.00 45.49 5.34
2771 2903 6.840780 AGTTCAAGTATGCCTTTGCTAAAT 57.159 33.333 0.00 0.00 38.71 1.40
2776 2908 5.402398 CCTAAAGTTCAAGTATGCCTTTGC 58.598 41.667 0.00 0.00 32.90 3.68
2777 2909 5.476945 ACCCTAAAGTTCAAGTATGCCTTTG 59.523 40.000 0.00 0.00 32.90 2.77
2778 2910 5.641155 ACCCTAAAGTTCAAGTATGCCTTT 58.359 37.500 0.00 0.00 34.21 3.11
2786 2921 5.710567 GCTATGGAAACCCTAAAGTTCAAGT 59.289 40.000 0.00 0.00 0.00 3.16
2787 2922 5.710099 TGCTATGGAAACCCTAAAGTTCAAG 59.290 40.000 0.00 0.00 0.00 3.02
2795 2930 6.191315 TGCTAAATTGCTATGGAAACCCTAA 58.809 36.000 0.00 0.00 0.00 2.69
2800 2935 5.965922 ACCTTGCTAAATTGCTATGGAAAC 58.034 37.500 0.00 0.00 0.00 2.78
2804 2939 5.126061 ACTGAACCTTGCTAAATTGCTATGG 59.874 40.000 0.00 0.00 0.00 2.74
2859 2994 0.684805 AACGGCCCCTGTGTCAAAAA 60.685 50.000 0.00 0.00 0.00 1.94
2860 2995 0.684805 AAACGGCCCCTGTGTCAAAA 60.685 50.000 0.00 0.00 0.00 2.44
2864 2999 1.515521 CTTCAAACGGCCCCTGTGTC 61.516 60.000 0.00 0.00 0.00 3.67
2883 3020 4.393371 GCAAACTCAATCTGGAAGTACTCC 59.607 45.833 0.00 0.00 45.64 3.85
2884 3021 4.393371 GGCAAACTCAATCTGGAAGTACTC 59.607 45.833 0.00 0.00 33.76 2.59
2886 3023 4.072131 TGGCAAACTCAATCTGGAAGTAC 58.928 43.478 0.00 0.00 33.76 2.73
2893 3031 6.310467 CAGATGAATTTGGCAAACTCAATCTG 59.690 38.462 28.07 28.07 0.00 2.90
2918 3056 5.179555 AGCTAAAATTTGAACGACTGGAGAC 59.820 40.000 0.00 0.00 0.00 3.36
2946 3120 8.492673 TTTTCGAGTTGAGCACATTAGATTAT 57.507 30.769 0.00 0.00 0.00 1.28
2949 3123 6.801539 TTTTTCGAGTTGAGCACATTAGAT 57.198 33.333 0.00 0.00 0.00 1.98
2975 3149 6.655078 ATGGTTTGAGCACACTAGATTTTT 57.345 33.333 0.00 0.00 0.00 1.94
2976 3150 7.575720 GCTTATGGTTTGAGCACACTAGATTTT 60.576 37.037 0.00 0.00 36.45 1.82
2977 3151 6.127897 GCTTATGGTTTGAGCACACTAGATTT 60.128 38.462 0.00 0.00 36.45 2.17
2978 3152 5.355350 GCTTATGGTTTGAGCACACTAGATT 59.645 40.000 0.00 0.00 36.45 2.40
2983 3157 2.162681 GGCTTATGGTTTGAGCACACT 58.837 47.619 0.00 0.00 38.14 3.55
3195 3369 2.731571 TAGCGCTGCTAGGGTTGGG 61.732 63.158 22.90 0.00 40.44 4.12
3206 3380 1.153549 GAAGGAGGTGGTAGCGCTG 60.154 63.158 22.90 0.00 0.00 5.18
3212 3386 2.345760 GGCGACGAAGGAGGTGGTA 61.346 63.158 0.00 0.00 0.00 3.25
3368 3551 2.479566 TCTCGTACACGTAGACCCTT 57.520 50.000 1.19 0.00 40.80 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.