Multiple sequence alignment - TraesCS3D01G328100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G328100 | chr3D | 100.000 | 5765 | 0 | 0 | 1 | 5765 | 441141911 | 441136147 | 0.000000e+00 | 10647.0 |
1 | TraesCS3D01G328100 | chr3D | 88.416 | 423 | 44 | 4 | 1796 | 2218 | 441139878 | 441139461 | 6.670000e-139 | 505.0 |
2 | TraesCS3D01G328100 | chr3D | 88.416 | 423 | 44 | 4 | 2034 | 2451 | 441140116 | 441139694 | 6.670000e-139 | 505.0 |
3 | TraesCS3D01G328100 | chr3B | 92.388 | 3455 | 164 | 44 | 2034 | 5439 | 578391632 | 578388228 | 0.000000e+00 | 4831.0 |
4 | TraesCS3D01G328100 | chr3B | 92.428 | 2245 | 114 | 22 | 1 | 2218 | 578393430 | 578391215 | 0.000000e+00 | 3153.0 |
5 | TraesCS3D01G328100 | chr3B | 83.588 | 262 | 13 | 14 | 5512 | 5764 | 578286576 | 578286336 | 9.730000e-53 | 219.0 |
6 | TraesCS3D01G328100 | chr3A | 91.673 | 2594 | 157 | 36 | 2272 | 4826 | 581266194 | 581263621 | 0.000000e+00 | 3539.0 |
7 | TraesCS3D01G328100 | chr3A | 93.293 | 1968 | 75 | 18 | 93 | 2031 | 581267897 | 581265958 | 0.000000e+00 | 2850.0 |
8 | TraesCS3D01G328100 | chr3A | 83.900 | 559 | 46 | 20 | 4778 | 5303 | 581263619 | 581263072 | 1.440000e-135 | 494.0 |
9 | TraesCS3D01G328100 | chr3A | 91.234 | 308 | 22 | 3 | 1 | 308 | 581268475 | 581268173 | 1.160000e-111 | 414.0 |
10 | TraesCS3D01G328100 | chr3A | 85.802 | 324 | 17 | 11 | 5451 | 5764 | 581262993 | 581262689 | 3.350000e-82 | 316.0 |
11 | TraesCS3D01G328100 | chr3A | 90.717 | 237 | 21 | 1 | 2034 | 2269 | 581266194 | 581265958 | 1.210000e-81 | 315.0 |
12 | TraesCS3D01G328100 | chr6A | 91.281 | 367 | 26 | 3 | 21 | 386 | 594367681 | 594368042 | 4.010000e-136 | 496.0 |
13 | TraesCS3D01G328100 | chr6A | 94.595 | 259 | 14 | 0 | 479 | 737 | 594368039 | 594368297 | 9.000000e-108 | 401.0 |
14 | TraesCS3D01G328100 | chr6A | 89.300 | 243 | 25 | 1 | 1067 | 1308 | 283735 | 283493 | 2.610000e-78 | 303.0 |
15 | TraesCS3D01G328100 | chr6A | 78.788 | 396 | 31 | 20 | 4924 | 5267 | 592346296 | 592346690 | 3.500000e-52 | 217.0 |
16 | TraesCS3D01G328100 | chr1B | 87.812 | 361 | 20 | 8 | 21 | 380 | 184230002 | 184230339 | 9.000000e-108 | 401.0 |
17 | TraesCS3D01G328100 | chr1B | 77.368 | 380 | 45 | 23 | 4926 | 5267 | 597157611 | 597157235 | 2.740000e-43 | 187.0 |
18 | TraesCS3D01G328100 | chr6B | 86.066 | 244 | 31 | 3 | 1067 | 1308 | 3380346 | 3380104 | 5.730000e-65 | 259.0 |
19 | TraesCS3D01G328100 | chr6B | 80.274 | 365 | 46 | 16 | 4924 | 5265 | 604704028 | 604703667 | 9.590000e-63 | 252.0 |
20 | TraesCS3D01G328100 | chr1D | 79.284 | 391 | 34 | 21 | 4924 | 5267 | 39864704 | 39864314 | 4.490000e-56 | 230.0 |
21 | TraesCS3D01G328100 | chr2B | 79.255 | 376 | 37 | 14 | 4921 | 5265 | 67894074 | 67894439 | 2.090000e-54 | 224.0 |
22 | TraesCS3D01G328100 | chr2D | 78.295 | 387 | 39 | 23 | 4924 | 5266 | 11777398 | 11777783 | 2.110000e-49 | 207.0 |
23 | TraesCS3D01G328100 | chr2D | 77.179 | 390 | 41 | 21 | 4925 | 5268 | 627039149 | 627038762 | 3.550000e-42 | 183.0 |
24 | TraesCS3D01G328100 | chr2D | 77.199 | 307 | 33 | 14 | 4923 | 5194 | 99502180 | 99502484 | 1.670000e-30 | 145.0 |
25 | TraesCS3D01G328100 | chrUn | 91.096 | 146 | 12 | 1 | 1286 | 1431 | 51455576 | 51455720 | 4.560000e-46 | 196.0 |
26 | TraesCS3D01G328100 | chr5A | 88.889 | 144 | 15 | 1 | 1288 | 1431 | 28620246 | 28620104 | 5.940000e-40 | 176.0 |
27 | TraesCS3D01G328100 | chr1A | 76.692 | 399 | 42 | 19 | 4924 | 5276 | 313266701 | 313267094 | 2.140000e-39 | 174.0 |
28 | TraesCS3D01G328100 | chr1A | 78.523 | 149 | 21 | 7 | 5088 | 5226 | 712845 | 712698 | 2.860000e-13 | 87.9 |
29 | TraesCS3D01G328100 | chr5D | 75.667 | 300 | 43 | 16 | 4924 | 5196 | 476618343 | 476618047 | 7.840000e-24 | 122.0 |
30 | TraesCS3D01G328100 | chr5D | 80.682 | 176 | 16 | 5 | 4924 | 5081 | 377146743 | 377146568 | 2.820000e-23 | 121.0 |
31 | TraesCS3D01G328100 | chr7A | 83.212 | 137 | 16 | 5 | 5134 | 5266 | 43401492 | 43401359 | 1.010000e-22 | 119.0 |
32 | TraesCS3D01G328100 | chr4B | 75.281 | 178 | 29 | 12 | 4999 | 5175 | 71221112 | 71220949 | 2.880000e-08 | 71.3 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G328100 | chr3D | 441136147 | 441141911 | 5764 | True | 3885.666667 | 10647 | 92.277333 | 1 | 5765 | 3 | chr3D.!!$R1 | 5764 |
1 | TraesCS3D01G328100 | chr3B | 578388228 | 578393430 | 5202 | True | 3992.000000 | 4831 | 92.408000 | 1 | 5439 | 2 | chr3B.!!$R2 | 5438 |
2 | TraesCS3D01G328100 | chr3A | 581262689 | 581268475 | 5786 | True | 1321.333333 | 3539 | 89.436500 | 1 | 5764 | 6 | chr3A.!!$R1 | 5763 |
3 | TraesCS3D01G328100 | chr6A | 594367681 | 594368297 | 616 | False | 448.500000 | 496 | 92.938000 | 21 | 737 | 2 | chr6A.!!$F2 | 716 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
563 | 1057 | 0.753848 | GGAGGACGAAGAGGGAGAGG | 60.754 | 65.000 | 0.00 | 0.0 | 0.00 | 3.69 | F |
2040 | 2570 | 0.398696 | ACACCTAAATGTGCCCACGA | 59.601 | 50.000 | 0.00 | 0.0 | 39.93 | 4.35 | F |
2145 | 2675 | 0.036105 | ATGCGAGCAATCAGTCACCA | 60.036 | 50.000 | 0.57 | 0.0 | 0.00 | 4.17 | F |
2281 | 2811 | 0.451783 | CCTAAATGTGCCCACGAAGC | 59.548 | 55.000 | 0.00 | 0.0 | 0.00 | 3.86 | F |
4081 | 4627 | 1.759445 | TGTCAGAGAAGCATAGGAGGC | 59.241 | 52.381 | 0.00 | 0.0 | 0.00 | 4.70 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2126 | 2656 | 0.036105 | TGGTGACTGATTGCTCGCAT | 60.036 | 50.000 | 0.00 | 0.0 | 0.00 | 4.73 | R |
3304 | 3850 | 0.524816 | CAACATCTTGCCATGCGAGC | 60.525 | 55.000 | 0.00 | 0.0 | 39.71 | 5.03 | R |
4027 | 4573 | 1.202452 | TGCGTCGAGATGCTTCATGAT | 60.202 | 47.619 | 16.93 | 0.0 | 43.48 | 2.45 | R |
4245 | 4791 | 0.168128 | GCACATCAGGTTTGCCGTAC | 59.832 | 55.000 | 0.00 | 0.0 | 40.50 | 3.67 | R |
5717 | 6397 | 0.105709 | GAGGAGAAGGGAGAGGGGAG | 60.106 | 65.000 | 0.00 | 0.0 | 0.00 | 4.30 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
78 | 79 | 4.084888 | GGTGTTACAGCCACGCGC | 62.085 | 66.667 | 5.73 | 0.00 | 33.56 | 6.86 |
205 | 207 | 4.510167 | ACAAATATGAACTAGGCAGGCT | 57.490 | 40.909 | 0.38 | 0.38 | 0.00 | 4.58 |
276 | 278 | 5.782047 | TGCCACATTCCAACTCTTTTATTG | 58.218 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
284 | 286 | 8.764287 | CATTCCAACTCTTTTATTGAAACAACC | 58.236 | 33.333 | 0.00 | 0.00 | 0.00 | 3.77 |
286 | 288 | 8.073467 | TCCAACTCTTTTATTGAAACAACCTT | 57.927 | 30.769 | 0.00 | 0.00 | 0.00 | 3.50 |
287 | 289 | 8.194769 | TCCAACTCTTTTATTGAAACAACCTTC | 58.805 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
563 | 1057 | 0.753848 | GGAGGACGAAGAGGGAGAGG | 60.754 | 65.000 | 0.00 | 0.00 | 0.00 | 3.69 |
767 | 1285 | 4.632458 | GATCGGCGGCGGAGACTC | 62.632 | 72.222 | 31.73 | 15.75 | 0.00 | 3.36 |
771 | 1289 | 2.829458 | GGCGGCGGAGACTCTACT | 60.829 | 66.667 | 9.78 | 0.00 | 0.00 | 2.57 |
783 | 1303 | 4.403113 | GGAGACTCTACTTTTTCTCCCGAT | 59.597 | 45.833 | 1.74 | 0.00 | 45.91 | 4.18 |
881 | 1404 | 4.235762 | CATTCGGCCCGGATCCGT | 62.236 | 66.667 | 31.22 | 9.45 | 46.49 | 4.69 |
882 | 1405 | 4.235762 | ATTCGGCCCGGATCCGTG | 62.236 | 66.667 | 31.22 | 22.77 | 46.49 | 4.94 |
979 | 1502 | 2.040606 | TTCCCTCCCCCTTCCTCG | 59.959 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
980 | 1503 | 2.824388 | CTTCCCTCCCCCTTCCTCGT | 62.824 | 65.000 | 0.00 | 0.00 | 0.00 | 4.18 |
981 | 1504 | 2.764547 | CCCTCCCCCTTCCTCGTC | 60.765 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
982 | 1505 | 2.764547 | CCTCCCCCTTCCTCGTCC | 60.765 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
983 | 1506 | 2.764547 | CTCCCCCTTCCTCGTCCC | 60.765 | 72.222 | 0.00 | 0.00 | 0.00 | 4.46 |
984 | 1507 | 3.281787 | TCCCCCTTCCTCGTCCCT | 61.282 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
985 | 1508 | 2.285442 | CCCCCTTCCTCGTCCCTT | 60.285 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
986 | 1509 | 2.368011 | CCCCCTTCCTCGTCCCTTC | 61.368 | 68.421 | 0.00 | 0.00 | 0.00 | 3.46 |
987 | 1510 | 2.368011 | CCCCTTCCTCGTCCCTTCC | 61.368 | 68.421 | 0.00 | 0.00 | 0.00 | 3.46 |
988 | 1511 | 1.306226 | CCCTTCCTCGTCCCTTCCT | 60.306 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
989 | 1512 | 1.331399 | CCCTTCCTCGTCCCTTCCTC | 61.331 | 65.000 | 0.00 | 0.00 | 0.00 | 3.71 |
999 | 1522 | 3.415087 | CCTTCCTCCAGCCCCCAG | 61.415 | 72.222 | 0.00 | 0.00 | 0.00 | 4.45 |
1026 | 1549 | 4.362476 | GCAAAACCCAGCGGCCAG | 62.362 | 66.667 | 2.24 | 0.00 | 0.00 | 4.85 |
1083 | 1606 | 4.806339 | CTTCTCGCCCCTCCCCCT | 62.806 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
1084 | 1607 | 4.798682 | TTCTCGCCCCTCCCCCTC | 62.799 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
1345 | 1874 | 3.184683 | CTCAAGTCGCTGCCGCTC | 61.185 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
1654 | 2183 | 1.615424 | GCAGAGGTACCCCAGGGAA | 60.615 | 63.158 | 7.25 | 0.00 | 38.96 | 3.97 |
1703 | 2232 | 1.884926 | GCGCTCATCGGGAAGAAGG | 60.885 | 63.158 | 0.00 | 0.00 | 38.94 | 3.46 |
1903 | 2432 | 2.093500 | AGGACAATGCGAGCAATCAGTA | 60.093 | 45.455 | 0.57 | 0.00 | 0.00 | 2.74 |
1910 | 2439 | 4.082274 | TGCGAGCAATCAGTAAACATTG | 57.918 | 40.909 | 0.00 | 0.00 | 33.77 | 2.82 |
2011 | 2541 | 2.892784 | GGTAACGAAGATAGCTGCCT | 57.107 | 50.000 | 0.00 | 0.00 | 30.55 | 4.75 |
2013 | 2543 | 3.640592 | GGTAACGAAGATAGCTGCCTAC | 58.359 | 50.000 | 0.00 | 0.00 | 30.55 | 3.18 |
2014 | 2544 | 2.892784 | AACGAAGATAGCTGCCTACC | 57.107 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2015 | 2545 | 1.776662 | ACGAAGATAGCTGCCTACCA | 58.223 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
2016 | 2546 | 1.683917 | ACGAAGATAGCTGCCTACCAG | 59.316 | 52.381 | 0.00 | 0.00 | 44.67 | 4.00 |
2017 | 2547 | 1.683917 | CGAAGATAGCTGCCTACCAGT | 59.316 | 52.381 | 0.00 | 0.00 | 43.71 | 4.00 |
2018 | 2548 | 2.101582 | CGAAGATAGCTGCCTACCAGTT | 59.898 | 50.000 | 0.00 | 0.00 | 43.71 | 3.16 |
2019 | 2549 | 3.430929 | CGAAGATAGCTGCCTACCAGTTT | 60.431 | 47.826 | 0.00 | 0.00 | 43.71 | 2.66 |
2020 | 2550 | 4.202121 | CGAAGATAGCTGCCTACCAGTTTA | 60.202 | 45.833 | 0.00 | 0.00 | 43.71 | 2.01 |
2021 | 2551 | 5.671493 | GAAGATAGCTGCCTACCAGTTTAA | 58.329 | 41.667 | 0.00 | 0.00 | 43.71 | 1.52 |
2022 | 2552 | 5.024785 | AGATAGCTGCCTACCAGTTTAAC | 57.975 | 43.478 | 0.00 | 0.00 | 43.71 | 2.01 |
2023 | 2553 | 4.469945 | AGATAGCTGCCTACCAGTTTAACA | 59.530 | 41.667 | 0.00 | 0.00 | 43.71 | 2.41 |
2024 | 2554 | 2.779506 | AGCTGCCTACCAGTTTAACAC | 58.220 | 47.619 | 0.00 | 0.00 | 43.71 | 3.32 |
2025 | 2555 | 1.810755 | GCTGCCTACCAGTTTAACACC | 59.189 | 52.381 | 0.00 | 0.00 | 43.71 | 4.16 |
2026 | 2556 | 2.552373 | GCTGCCTACCAGTTTAACACCT | 60.552 | 50.000 | 0.00 | 0.00 | 43.71 | 4.00 |
2027 | 2557 | 3.307199 | GCTGCCTACCAGTTTAACACCTA | 60.307 | 47.826 | 0.00 | 0.00 | 43.71 | 3.08 |
2028 | 2558 | 4.804934 | GCTGCCTACCAGTTTAACACCTAA | 60.805 | 45.833 | 0.00 | 0.00 | 43.71 | 2.69 |
2029 | 2559 | 5.307544 | TGCCTACCAGTTTAACACCTAAA | 57.692 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
2030 | 2560 | 5.883180 | TGCCTACCAGTTTAACACCTAAAT | 58.117 | 37.500 | 0.00 | 0.00 | 32.14 | 1.40 |
2031 | 2561 | 5.708230 | TGCCTACCAGTTTAACACCTAAATG | 59.292 | 40.000 | 0.00 | 0.00 | 32.14 | 2.32 |
2032 | 2562 | 5.708697 | GCCTACCAGTTTAACACCTAAATGT | 59.291 | 40.000 | 0.00 | 0.00 | 32.14 | 2.71 |
2033 | 2563 | 6.349033 | GCCTACCAGTTTAACACCTAAATGTG | 60.349 | 42.308 | 0.00 | 0.00 | 42.05 | 3.21 |
2034 | 2564 | 5.447624 | ACCAGTTTAACACCTAAATGTGC | 57.552 | 39.130 | 0.00 | 0.00 | 39.93 | 4.57 |
2035 | 2565 | 4.279922 | ACCAGTTTAACACCTAAATGTGCC | 59.720 | 41.667 | 0.00 | 0.00 | 39.93 | 5.01 |
2036 | 2566 | 4.321675 | CCAGTTTAACACCTAAATGTGCCC | 60.322 | 45.833 | 0.00 | 0.00 | 39.93 | 5.36 |
2037 | 2567 | 4.279671 | CAGTTTAACACCTAAATGTGCCCA | 59.720 | 41.667 | 0.00 | 0.00 | 39.93 | 5.36 |
2038 | 2568 | 4.279922 | AGTTTAACACCTAAATGTGCCCAC | 59.720 | 41.667 | 0.00 | 0.00 | 39.93 | 4.61 |
2039 | 2569 | 1.243902 | AACACCTAAATGTGCCCACG | 58.756 | 50.000 | 0.00 | 0.00 | 39.93 | 4.94 |
2040 | 2570 | 0.398696 | ACACCTAAATGTGCCCACGA | 59.601 | 50.000 | 0.00 | 0.00 | 39.93 | 4.35 |
2041 | 2571 | 1.202830 | ACACCTAAATGTGCCCACGAA | 60.203 | 47.619 | 0.00 | 0.00 | 39.93 | 3.85 |
2042 | 2572 | 1.468520 | CACCTAAATGTGCCCACGAAG | 59.531 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
2043 | 2573 | 5.637982 | ACACCTAAATGTGCCCACGAAGT | 62.638 | 47.826 | 0.00 | 0.00 | 40.34 | 3.01 |
2044 | 2574 | 2.303600 | ACCTAAATGTGCCCACGAAGTA | 59.696 | 45.455 | 0.00 | 0.00 | 41.61 | 2.24 |
2045 | 2575 | 3.244630 | ACCTAAATGTGCCCACGAAGTAA | 60.245 | 43.478 | 0.00 | 0.00 | 41.61 | 2.24 |
2046 | 2576 | 3.374058 | CCTAAATGTGCCCACGAAGTAAG | 59.626 | 47.826 | 0.00 | 0.00 | 41.61 | 2.34 |
2047 | 2577 | 2.561478 | AATGTGCCCACGAAGTAAGT | 57.439 | 45.000 | 0.00 | 0.00 | 41.61 | 2.24 |
2048 | 2578 | 2.094762 | ATGTGCCCACGAAGTAAGTC | 57.905 | 50.000 | 0.00 | 0.00 | 41.61 | 3.01 |
2049 | 2579 | 1.045407 | TGTGCCCACGAAGTAAGTCT | 58.955 | 50.000 | 0.00 | 0.00 | 41.61 | 3.24 |
2050 | 2580 | 1.414919 | TGTGCCCACGAAGTAAGTCTT | 59.585 | 47.619 | 0.00 | 0.00 | 41.61 | 3.01 |
2051 | 2581 | 2.158871 | TGTGCCCACGAAGTAAGTCTTT | 60.159 | 45.455 | 0.00 | 0.00 | 41.61 | 2.52 |
2052 | 2582 | 2.223377 | GTGCCCACGAAGTAAGTCTTTG | 59.777 | 50.000 | 0.00 | 0.00 | 41.61 | 2.77 |
2053 | 2583 | 2.103432 | TGCCCACGAAGTAAGTCTTTGA | 59.897 | 45.455 | 0.00 | 0.00 | 41.61 | 2.69 |
2054 | 2584 | 3.244422 | TGCCCACGAAGTAAGTCTTTGAT | 60.244 | 43.478 | 0.00 | 0.00 | 41.61 | 2.57 |
2055 | 2585 | 3.751698 | GCCCACGAAGTAAGTCTTTGATT | 59.248 | 43.478 | 0.00 | 0.00 | 41.61 | 2.57 |
2056 | 2586 | 4.933400 | GCCCACGAAGTAAGTCTTTGATTA | 59.067 | 41.667 | 0.00 | 0.00 | 41.61 | 1.75 |
2057 | 2587 | 5.585047 | GCCCACGAAGTAAGTCTTTGATTAT | 59.415 | 40.000 | 0.00 | 0.00 | 41.61 | 1.28 |
2058 | 2588 | 6.093633 | GCCCACGAAGTAAGTCTTTGATTATT | 59.906 | 38.462 | 0.00 | 0.00 | 41.61 | 1.40 |
2059 | 2589 | 7.279313 | GCCCACGAAGTAAGTCTTTGATTATTA | 59.721 | 37.037 | 0.00 | 0.00 | 41.61 | 0.98 |
2060 | 2590 | 9.158233 | CCCACGAAGTAAGTCTTTGATTATTAA | 57.842 | 33.333 | 0.00 | 0.00 | 41.61 | 1.40 |
2061 | 2591 | 9.968743 | CCACGAAGTAAGTCTTTGATTATTAAC | 57.031 | 33.333 | 0.00 | 0.00 | 41.61 | 2.01 |
2075 | 2605 | 9.921637 | TTTGATTATTAACTGAAAATGTGGGAC | 57.078 | 29.630 | 0.00 | 0.00 | 0.00 | 4.46 |
2076 | 2606 | 8.877864 | TGATTATTAACTGAAAATGTGGGACT | 57.122 | 30.769 | 0.00 | 0.00 | 0.00 | 3.85 |
2077 | 2607 | 9.308000 | TGATTATTAACTGAAAATGTGGGACTT | 57.692 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
2078 | 2608 | 9.573133 | GATTATTAACTGAAAATGTGGGACTTG | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2079 | 2609 | 8.698973 | TTATTAACTGAAAATGTGGGACTTGA | 57.301 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
2080 | 2610 | 7.595819 | ATTAACTGAAAATGTGGGACTTGAA | 57.404 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2081 | 2611 | 7.595819 | TTAACTGAAAATGTGGGACTTGAAT | 57.404 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2082 | 2612 | 6.484364 | AACTGAAAATGTGGGACTTGAATT | 57.516 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2083 | 2613 | 5.846203 | ACTGAAAATGTGGGACTTGAATTG | 58.154 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
2084 | 2614 | 4.630111 | TGAAAATGTGGGACTTGAATTGC | 58.370 | 39.130 | 0.00 | 0.00 | 0.00 | 3.56 |
2085 | 2615 | 4.100653 | TGAAAATGTGGGACTTGAATTGCA | 59.899 | 37.500 | 0.00 | 0.00 | 0.00 | 4.08 |
2086 | 2616 | 3.947910 | AATGTGGGACTTGAATTGCAG | 57.052 | 42.857 | 0.00 | 0.00 | 0.00 | 4.41 |
2087 | 2617 | 2.363306 | TGTGGGACTTGAATTGCAGT | 57.637 | 45.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2088 | 2618 | 3.500448 | TGTGGGACTTGAATTGCAGTA | 57.500 | 42.857 | 0.00 | 0.00 | 0.00 | 2.74 |
2089 | 2619 | 3.411446 | TGTGGGACTTGAATTGCAGTAG | 58.589 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2090 | 2620 | 3.072330 | TGTGGGACTTGAATTGCAGTAGA | 59.928 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
2091 | 2621 | 3.686726 | GTGGGACTTGAATTGCAGTAGAG | 59.313 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
2092 | 2622 | 3.274288 | GGGACTTGAATTGCAGTAGAGG | 58.726 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2093 | 2623 | 3.307762 | GGGACTTGAATTGCAGTAGAGGT | 60.308 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
2094 | 2624 | 4.081087 | GGGACTTGAATTGCAGTAGAGGTA | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 3.08 |
2095 | 2625 | 5.396884 | GGGACTTGAATTGCAGTAGAGGTAT | 60.397 | 44.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2096 | 2626 | 6.183360 | GGGACTTGAATTGCAGTAGAGGTATA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 1.47 |
2097 | 2627 | 7.272978 | GGACTTGAATTGCAGTAGAGGTATAA | 58.727 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
2098 | 2628 | 7.934120 | GGACTTGAATTGCAGTAGAGGTATAAT | 59.066 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
2099 | 2629 | 9.331282 | GACTTGAATTGCAGTAGAGGTATAATT | 57.669 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2100 | 2630 | 9.331282 | ACTTGAATTGCAGTAGAGGTATAATTC | 57.669 | 33.333 | 0.00 | 0.00 | 35.02 | 2.17 |
2101 | 2631 | 9.553064 | CTTGAATTGCAGTAGAGGTATAATTCT | 57.447 | 33.333 | 0.00 | 0.00 | 35.32 | 2.40 |
2102 | 2632 | 8.893219 | TGAATTGCAGTAGAGGTATAATTCTG | 57.107 | 34.615 | 0.00 | 0.00 | 35.32 | 3.02 |
2103 | 2633 | 7.933577 | TGAATTGCAGTAGAGGTATAATTCTGG | 59.066 | 37.037 | 0.00 | 0.00 | 35.32 | 3.86 |
2104 | 2634 | 6.808321 | TTGCAGTAGAGGTATAATTCTGGT | 57.192 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
2105 | 2635 | 6.406692 | TGCAGTAGAGGTATAATTCTGGTC | 57.593 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2106 | 2636 | 6.136857 | TGCAGTAGAGGTATAATTCTGGTCT | 58.863 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2107 | 2637 | 6.040955 | TGCAGTAGAGGTATAATTCTGGTCTG | 59.959 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
2108 | 2638 | 6.517529 | GCAGTAGAGGTATAATTCTGGTCTGG | 60.518 | 46.154 | 0.00 | 0.00 | 0.00 | 3.86 |
2109 | 2639 | 6.015010 | CAGTAGAGGTATAATTCTGGTCTGGG | 60.015 | 46.154 | 0.00 | 0.00 | 0.00 | 4.45 |
2110 | 2640 | 5.157770 | AGAGGTATAATTCTGGTCTGGGA | 57.842 | 43.478 | 0.00 | 0.00 | 0.00 | 4.37 |
2111 | 2641 | 5.731924 | AGAGGTATAATTCTGGTCTGGGAT | 58.268 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
2112 | 2642 | 5.782845 | AGAGGTATAATTCTGGTCTGGGATC | 59.217 | 44.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2113 | 2643 | 5.476983 | AGGTATAATTCTGGTCTGGGATCA | 58.523 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
2114 | 2644 | 6.094302 | AGGTATAATTCTGGTCTGGGATCAT | 58.906 | 40.000 | 0.00 | 0.00 | 0.00 | 2.45 |
2115 | 2645 | 6.013032 | AGGTATAATTCTGGTCTGGGATCATG | 60.013 | 42.308 | 0.00 | 0.00 | 0.00 | 3.07 |
2116 | 2646 | 2.653234 | ATTCTGGTCTGGGATCATGC | 57.347 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
2117 | 2647 | 1.288188 | TTCTGGTCTGGGATCATGCA | 58.712 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
2118 | 2648 | 1.514983 | TCTGGTCTGGGATCATGCAT | 58.485 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
2119 | 2649 | 1.848388 | TCTGGTCTGGGATCATGCATT | 59.152 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
2120 | 2650 | 3.047857 | TCTGGTCTGGGATCATGCATTA | 58.952 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
2121 | 2651 | 3.072038 | TCTGGTCTGGGATCATGCATTAG | 59.928 | 47.826 | 0.00 | 0.00 | 0.00 | 1.73 |
2122 | 2652 | 2.107031 | TGGTCTGGGATCATGCATTAGG | 59.893 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2123 | 2653 | 2.373169 | GGTCTGGGATCATGCATTAGGA | 59.627 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
2124 | 2654 | 3.406764 | GTCTGGGATCATGCATTAGGAC | 58.593 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2125 | 2655 | 3.047857 | TCTGGGATCATGCATTAGGACA | 58.952 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2126 | 2656 | 3.459227 | TCTGGGATCATGCATTAGGACAA | 59.541 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
2127 | 2657 | 4.105217 | TCTGGGATCATGCATTAGGACAAT | 59.895 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
2128 | 2658 | 4.146564 | TGGGATCATGCATTAGGACAATG | 58.853 | 43.478 | 0.00 | 0.00 | 0.00 | 2.82 |
2133 | 2663 | 3.833706 | GCATTAGGACAATGCGAGC | 57.166 | 52.632 | 6.24 | 0.00 | 42.79 | 5.03 |
2134 | 2664 | 1.016627 | GCATTAGGACAATGCGAGCA | 58.983 | 50.000 | 6.24 | 0.00 | 42.79 | 4.26 |
2135 | 2665 | 1.401552 | GCATTAGGACAATGCGAGCAA | 59.598 | 47.619 | 0.57 | 0.00 | 42.79 | 3.91 |
2136 | 2666 | 2.033801 | GCATTAGGACAATGCGAGCAAT | 59.966 | 45.455 | 0.57 | 0.00 | 42.79 | 3.56 |
2137 | 2667 | 3.851105 | GCATTAGGACAATGCGAGCAATC | 60.851 | 47.826 | 0.57 | 0.52 | 42.79 | 2.67 |
2138 | 2668 | 2.689553 | TAGGACAATGCGAGCAATCA | 57.310 | 45.000 | 0.57 | 0.00 | 0.00 | 2.57 |
2139 | 2669 | 1.376543 | AGGACAATGCGAGCAATCAG | 58.623 | 50.000 | 0.57 | 0.00 | 0.00 | 2.90 |
2140 | 2670 | 1.089920 | GGACAATGCGAGCAATCAGT | 58.910 | 50.000 | 0.57 | 0.00 | 0.00 | 3.41 |
2141 | 2671 | 1.063174 | GGACAATGCGAGCAATCAGTC | 59.937 | 52.381 | 0.57 | 7.75 | 0.00 | 3.51 |
2142 | 2672 | 1.733912 | GACAATGCGAGCAATCAGTCA | 59.266 | 47.619 | 0.57 | 0.00 | 0.00 | 3.41 |
2143 | 2673 | 1.466167 | ACAATGCGAGCAATCAGTCAC | 59.534 | 47.619 | 0.57 | 0.00 | 0.00 | 3.67 |
2144 | 2674 | 1.089920 | AATGCGAGCAATCAGTCACC | 58.910 | 50.000 | 0.57 | 0.00 | 0.00 | 4.02 |
2145 | 2675 | 0.036105 | ATGCGAGCAATCAGTCACCA | 60.036 | 50.000 | 0.57 | 0.00 | 0.00 | 4.17 |
2146 | 2676 | 0.036105 | TGCGAGCAATCAGTCACCAT | 60.036 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2147 | 2677 | 1.089920 | GCGAGCAATCAGTCACCATT | 58.910 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2148 | 2678 | 1.063174 | GCGAGCAATCAGTCACCATTC | 59.937 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
2149 | 2679 | 2.625737 | CGAGCAATCAGTCACCATTCT | 58.374 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
2150 | 2680 | 2.350804 | CGAGCAATCAGTCACCATTCTG | 59.649 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2151 | 2681 | 3.341823 | GAGCAATCAGTCACCATTCTGT | 58.658 | 45.455 | 0.00 | 0.00 | 33.89 | 3.41 |
2152 | 2682 | 3.755378 | GAGCAATCAGTCACCATTCTGTT | 59.245 | 43.478 | 0.00 | 0.00 | 33.89 | 3.16 |
2153 | 2683 | 4.910195 | AGCAATCAGTCACCATTCTGTTA | 58.090 | 39.130 | 0.00 | 0.00 | 33.89 | 2.41 |
2154 | 2684 | 5.316167 | AGCAATCAGTCACCATTCTGTTAA | 58.684 | 37.500 | 0.00 | 0.00 | 33.89 | 2.01 |
2155 | 2685 | 5.413833 | AGCAATCAGTCACCATTCTGTTAAG | 59.586 | 40.000 | 0.00 | 0.00 | 33.89 | 1.85 |
2156 | 2686 | 5.412594 | GCAATCAGTCACCATTCTGTTAAGA | 59.587 | 40.000 | 0.00 | 0.00 | 33.89 | 2.10 |
2157 | 2687 | 6.402983 | GCAATCAGTCACCATTCTGTTAAGAG | 60.403 | 42.308 | 0.00 | 0.00 | 32.79 | 2.85 |
2158 | 2688 | 5.808366 | TCAGTCACCATTCTGTTAAGAGT | 57.192 | 39.130 | 0.00 | 0.00 | 32.79 | 3.24 |
2159 | 2689 | 5.541845 | TCAGTCACCATTCTGTTAAGAGTG | 58.458 | 41.667 | 0.00 | 0.00 | 39.30 | 3.51 |
2160 | 2690 | 5.070446 | TCAGTCACCATTCTGTTAAGAGTGT | 59.930 | 40.000 | 0.00 | 0.00 | 38.23 | 3.55 |
2161 | 2691 | 5.178252 | CAGTCACCATTCTGTTAAGAGTGTG | 59.822 | 44.000 | 0.00 | 4.31 | 38.23 | 3.82 |
2162 | 2692 | 5.070446 | AGTCACCATTCTGTTAAGAGTGTGA | 59.930 | 40.000 | 0.00 | 6.31 | 38.23 | 3.58 |
2163 | 2693 | 5.406780 | GTCACCATTCTGTTAAGAGTGTGAG | 59.593 | 44.000 | 13.13 | 6.01 | 38.23 | 3.51 |
2164 | 2694 | 5.304357 | TCACCATTCTGTTAAGAGTGTGAGA | 59.696 | 40.000 | 0.00 | 0.61 | 38.23 | 3.27 |
2165 | 2695 | 5.636965 | CACCATTCTGTTAAGAGTGTGAGAG | 59.363 | 44.000 | 0.00 | 0.00 | 38.23 | 3.20 |
2166 | 2696 | 5.305644 | ACCATTCTGTTAAGAGTGTGAGAGT | 59.694 | 40.000 | 0.00 | 0.00 | 38.23 | 3.24 |
2167 | 2697 | 5.636965 | CCATTCTGTTAAGAGTGTGAGAGTG | 59.363 | 44.000 | 0.00 | 0.00 | 38.23 | 3.51 |
2168 | 2698 | 6.450545 | CATTCTGTTAAGAGTGTGAGAGTGA | 58.549 | 40.000 | 0.00 | 0.00 | 35.87 | 3.41 |
2169 | 2699 | 6.465439 | TTCTGTTAAGAGTGTGAGAGTGAA | 57.535 | 37.500 | 0.00 | 0.00 | 32.79 | 3.18 |
2170 | 2700 | 6.465439 | TCTGTTAAGAGTGTGAGAGTGAAA | 57.535 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
2171 | 2701 | 7.055667 | TCTGTTAAGAGTGTGAGAGTGAAAT | 57.944 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2172 | 2702 | 7.148641 | TCTGTTAAGAGTGTGAGAGTGAAATC | 58.851 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
2173 | 2703 | 5.920840 | TGTTAAGAGTGTGAGAGTGAAATCG | 59.079 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2174 | 2704 | 4.592485 | AAGAGTGTGAGAGTGAAATCGT | 57.408 | 40.909 | 0.00 | 0.00 | 0.00 | 3.73 |
2175 | 2705 | 4.167554 | AGAGTGTGAGAGTGAAATCGTC | 57.832 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
2176 | 2706 | 3.057174 | AGAGTGTGAGAGTGAAATCGTCC | 60.057 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
2177 | 2707 | 2.628178 | AGTGTGAGAGTGAAATCGTCCA | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2178 | 2708 | 3.259374 | AGTGTGAGAGTGAAATCGTCCAT | 59.741 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
2179 | 2709 | 3.369147 | GTGTGAGAGTGAAATCGTCCATG | 59.631 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
2180 | 2710 | 2.932614 | GTGAGAGTGAAATCGTCCATGG | 59.067 | 50.000 | 4.97 | 4.97 | 0.00 | 3.66 |
2181 | 2711 | 1.936547 | GAGAGTGAAATCGTCCATGGC | 59.063 | 52.381 | 6.96 | 0.96 | 0.00 | 4.40 |
2182 | 2712 | 1.278985 | AGAGTGAAATCGTCCATGGCA | 59.721 | 47.619 | 6.96 | 0.00 | 0.00 | 4.92 |
2183 | 2713 | 1.398390 | GAGTGAAATCGTCCATGGCAC | 59.602 | 52.381 | 6.96 | 7.60 | 0.00 | 5.01 |
2213 | 2743 | 8.553459 | GCAATTGGCATAGTATACATCTAGTT | 57.447 | 34.615 | 7.72 | 0.00 | 43.97 | 2.24 |
2214 | 2744 | 9.653287 | GCAATTGGCATAGTATACATCTAGTTA | 57.347 | 33.333 | 7.72 | 0.00 | 43.97 | 2.24 |
2216 | 2746 | 9.877178 | AATTGGCATAGTATACATCTAGTTAGC | 57.123 | 33.333 | 5.50 | 0.00 | 0.00 | 3.09 |
2217 | 2747 | 8.417273 | TTGGCATAGTATACATCTAGTTAGCA | 57.583 | 34.615 | 5.50 | 0.00 | 0.00 | 3.49 |
2218 | 2748 | 7.827701 | TGGCATAGTATACATCTAGTTAGCAC | 58.172 | 38.462 | 5.50 | 0.00 | 0.00 | 4.40 |
2219 | 2749 | 7.093902 | TGGCATAGTATACATCTAGTTAGCACC | 60.094 | 40.741 | 5.50 | 0.00 | 0.00 | 5.01 |
2220 | 2750 | 7.122948 | GGCATAGTATACATCTAGTTAGCACCT | 59.877 | 40.741 | 5.50 | 0.00 | 0.00 | 4.00 |
2221 | 2751 | 8.524487 | GCATAGTATACATCTAGTTAGCACCTT | 58.476 | 37.037 | 5.50 | 0.00 | 0.00 | 3.50 |
2230 | 2760 | 9.477484 | ACATCTAGTTAGCACCTTATAAATTCG | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.34 |
2231 | 2761 | 9.477484 | CATCTAGTTAGCACCTTATAAATTCGT | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
2235 | 2765 | 8.429493 | AGTTAGCACCTTATAAATTCGTTACC | 57.571 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
2236 | 2766 | 5.978934 | AGCACCTTATAAATTCGTTACCG | 57.021 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
2237 | 2767 | 5.663456 | AGCACCTTATAAATTCGTTACCGA | 58.337 | 37.500 | 0.00 | 0.00 | 42.41 | 4.69 |
2281 | 2811 | 0.451783 | CCTAAATGTGCCCACGAAGC | 59.548 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2315 | 2845 | 9.157104 | TGATTATTAACTGAAAATGTGCGACTA | 57.843 | 29.630 | 0.00 | 0.00 | 0.00 | 2.59 |
2323 | 2854 | 5.688823 | TGAAAATGTGCGACTAGAATTGTG | 58.311 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
2336 | 2867 | 9.319143 | CGACTAGAATTGTGGAGATTAAATTCT | 57.681 | 33.333 | 12.56 | 12.56 | 46.12 | 2.40 |
2345 | 2876 | 6.672218 | TGTGGAGATTAAATTCTAGTCTGGGA | 59.328 | 38.462 | 0.00 | 0.00 | 0.00 | 4.37 |
2362 | 2893 | 5.645497 | GTCTGGGATCATGCATTAGGATAAC | 59.355 | 44.000 | 0.00 | 0.00 | 28.22 | 1.89 |
2363 | 2894 | 4.578871 | TGGGATCATGCATTAGGATAACG | 58.421 | 43.478 | 0.00 | 0.00 | 28.22 | 3.18 |
2367 | 2898 | 5.391310 | GGATCATGCATTAGGATAACGCAAG | 60.391 | 44.000 | 0.00 | 0.00 | 35.98 | 4.01 |
2372 | 2903 | 4.097741 | TGCATTAGGATAACGCAAGCAATT | 59.902 | 37.500 | 0.00 | 0.00 | 45.62 | 2.32 |
2398 | 2929 | 1.867233 | CCAGTGTGTTCCGAGTGAAAG | 59.133 | 52.381 | 0.00 | 0.00 | 33.94 | 2.62 |
2400 | 2931 | 2.797156 | CAGTGTGTTCCGAGTGAAAGAG | 59.203 | 50.000 | 0.00 | 0.00 | 33.94 | 2.85 |
2491 | 3022 | 8.724310 | AGCTGGATACCTGTTTAATACCTAAAT | 58.276 | 33.333 | 0.00 | 0.00 | 32.14 | 1.40 |
2502 | 3033 | 7.120579 | TGTTTAATACCTAAATGTCAGCCTGTG | 59.879 | 37.037 | 0.00 | 0.00 | 32.14 | 3.66 |
2604 | 3138 | 4.466015 | GGAAATGTATGGGTGATTTGGTGT | 59.534 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
2643 | 3185 | 6.753107 | AGGGTTCCATTTAACTATTCGTTG | 57.247 | 37.500 | 0.00 | 0.00 | 37.05 | 4.10 |
2654 | 3199 | 5.652744 | AACTATTCGTTGTCTTGACACAC | 57.347 | 39.130 | 2.62 | 4.89 | 33.72 | 3.82 |
2672 | 3217 | 8.402798 | TGACACACTCAACATATTTGGTAAAT | 57.597 | 30.769 | 0.00 | 0.00 | 34.90 | 1.40 |
2686 | 3231 | 2.632028 | TGGTAAATTTGCATGTGCTGGT | 59.368 | 40.909 | 8.59 | 0.00 | 42.66 | 4.00 |
2735 | 3281 | 4.131596 | TGTTAGCTTACTTTTCGCCACTT | 58.868 | 39.130 | 4.27 | 0.00 | 0.00 | 3.16 |
2782 | 3328 | 2.028112 | TGTATGTTCTGCGGCTTTCTCT | 60.028 | 45.455 | 0.00 | 0.00 | 0.00 | 3.10 |
2839 | 3385 | 5.010282 | CCTTGTTAATAGTCAAGTTGCCCT | 58.990 | 41.667 | 0.00 | 0.00 | 39.25 | 5.19 |
2912 | 3458 | 4.253685 | TCTCCTTTATTGTGTACTGCTGC | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 5.25 |
2920 | 3466 | 2.207229 | TGTACTGCTGCGTGTCCCT | 61.207 | 57.895 | 7.25 | 0.00 | 0.00 | 4.20 |
2933 | 3479 | 3.189702 | GCGTGTCCCTTTTTATGTGCTAA | 59.810 | 43.478 | 0.00 | 0.00 | 0.00 | 3.09 |
3304 | 3850 | 5.118990 | TCAGTGGAGTTTGAAAAGAGACAG | 58.881 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3366 | 3912 | 4.566070 | CCTTCCTACCGTTTGTCCCAAATA | 60.566 | 45.833 | 0.00 | 0.00 | 0.00 | 1.40 |
3385 | 3931 | 6.128172 | CCAAATATTCACTGTCGCTTCTTTCT | 60.128 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
3774 | 4320 | 9.065871 | GCAACTCAAACTGTTGATATATTTCAC | 57.934 | 33.333 | 10.29 | 0.00 | 45.27 | 3.18 |
3931 | 4477 | 4.460382 | CAGGTTTGTTGCCTATCTTGTGAT | 59.540 | 41.667 | 0.00 | 0.00 | 34.45 | 3.06 |
4081 | 4627 | 1.759445 | TGTCAGAGAAGCATAGGAGGC | 59.241 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
4206 | 4752 | 2.622436 | CTGAGAAATCCTTCCACGACC | 58.378 | 52.381 | 0.00 | 0.00 | 31.28 | 4.79 |
4245 | 4791 | 2.202623 | GGGCTCTCGTACTGCGTG | 60.203 | 66.667 | 0.00 | 0.00 | 42.13 | 5.34 |
4287 | 4833 | 1.126846 | CGCTTGATGTTCGAGGTGTTC | 59.873 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
4308 | 4854 | 1.371183 | CTTCGAACAGGTCCAGCCA | 59.629 | 57.895 | 0.00 | 0.00 | 40.61 | 4.75 |
4365 | 4911 | 1.375908 | GCTGAACTGATGACCGGCA | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
4399 | 4946 | 3.258123 | GCTTGAAGGAAAAATGCAGGGTA | 59.742 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
4403 | 4950 | 4.157656 | TGAAGGAAAAATGCAGGGTAATCG | 59.842 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
4419 | 4966 | 0.318784 | ATCGAAATCCTAGCGCGGAC | 60.319 | 55.000 | 8.83 | 0.00 | 35.52 | 4.79 |
4538 | 5085 | 4.595762 | AACCTCTTGTCTTGCGTACTAA | 57.404 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
4609 | 5159 | 5.522460 | TCGAAGTTACAGTTTTGAGAGTTGG | 59.478 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
4633 | 5183 | 5.803967 | GCTGTAAATTCCAATTTGAGCAGAG | 59.196 | 40.000 | 19.06 | 7.18 | 40.82 | 3.35 |
4634 | 5184 | 6.271488 | TGTAAATTCCAATTTGAGCAGAGG | 57.729 | 37.500 | 7.42 | 0.00 | 38.90 | 3.69 |
4650 | 5201 | 1.152902 | AGGACAAACAGCTGCAGCA | 60.153 | 52.632 | 38.24 | 0.00 | 45.16 | 4.41 |
4677 | 5231 | 6.438741 | CAGCAGGAGGAAGATATAGTTATCCA | 59.561 | 42.308 | 0.00 | 0.00 | 35.74 | 3.41 |
4717 | 5271 | 3.498397 | AGTGTTGTAGCCGAAAATGTGAG | 59.502 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
4757 | 5311 | 4.722194 | ACGTGCAATGTCATTTGTCATAC | 58.278 | 39.130 | 0.00 | 0.00 | 0.00 | 2.39 |
4765 | 5319 | 2.080693 | TCATTTGTCATACGGGTGCAC | 58.919 | 47.619 | 8.80 | 8.80 | 0.00 | 4.57 |
4774 | 5328 | 3.936453 | TCATACGGGTGCACAAGTTTATC | 59.064 | 43.478 | 20.43 | 0.00 | 0.00 | 1.75 |
4776 | 5330 | 2.423577 | ACGGGTGCACAAGTTTATCTC | 58.576 | 47.619 | 20.43 | 0.00 | 0.00 | 2.75 |
4777 | 5331 | 2.038557 | ACGGGTGCACAAGTTTATCTCT | 59.961 | 45.455 | 20.43 | 0.00 | 0.00 | 3.10 |
4808 | 5409 | 9.701098 | TTTAACATAGTACAATCGAAGTCACTT | 57.299 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
4810 | 5411 | 6.688578 | ACATAGTACAATCGAAGTCACTTGT | 58.311 | 36.000 | 0.00 | 5.29 | 36.00 | 3.16 |
4829 | 5430 | 5.185056 | ACTTGTTGGGTGCATAAGTTTATCC | 59.815 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
5036 | 5666 | 7.795482 | TGTTAGTGTAACAAGTGTGCTTAAT | 57.205 | 32.000 | 0.00 | 0.00 | 44.95 | 1.40 |
5048 | 5678 | 7.871973 | ACAAGTGTGCTTAATAATTTTCATGCA | 59.128 | 29.630 | 0.00 | 0.00 | 32.87 | 3.96 |
5053 | 5683 | 9.049523 | TGTGCTTAATAATTTTCATGCAAAACA | 57.950 | 25.926 | 0.00 | 0.00 | 36.78 | 2.83 |
5072 | 5702 | 1.819905 | TGGTGACAGTGCTTCGTCA | 59.180 | 52.632 | 0.00 | 0.00 | 39.77 | 4.35 |
5234 | 5895 | 0.764271 | AACATTTTTGGTGGGCAGGG | 59.236 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
5235 | 5896 | 1.126948 | ACATTTTTGGTGGGCAGGGG | 61.127 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
5244 | 5905 | 1.773804 | TGGGCAGGGGCATATGCTA | 60.774 | 57.895 | 26.12 | 1.78 | 43.71 | 3.49 |
5255 | 5916 | 1.800805 | CATATGCTACCAAGAGCCGG | 58.199 | 55.000 | 0.00 | 0.00 | 42.11 | 6.13 |
5335 | 5996 | 8.660373 | AGCTTTATTTTATCTCGTTCACAGAAG | 58.340 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
5353 | 6014 | 2.032528 | CGCTGGTTCTTCTGGGCA | 59.967 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
5474 | 6140 | 2.596904 | AATTGCTGATGCCATGCTTC | 57.403 | 45.000 | 0.00 | 0.00 | 38.71 | 3.86 |
5501 | 6167 | 1.925946 | GCGATTGTTCACACCAGCAAC | 60.926 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
5596 | 6262 | 2.893404 | CCAATACGAACGGGCCGG | 60.893 | 66.667 | 31.78 | 15.34 | 0.00 | 6.13 |
5629 | 6295 | 4.796231 | CGGACCAGGCTTCGACCG | 62.796 | 72.222 | 7.62 | 7.62 | 33.69 | 4.79 |
5683 | 6359 | 1.075536 | CCAAACCCTGAACCCTAGCTT | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 3.74 |
5702 | 6382 | 3.403558 | GCCGCCCCCTTCTCTTCT | 61.404 | 66.667 | 0.00 | 0.00 | 0.00 | 2.85 |
5703 | 6383 | 2.904131 | CCGCCCCCTTCTCTTCTC | 59.096 | 66.667 | 0.00 | 0.00 | 0.00 | 2.87 |
5704 | 6384 | 1.687493 | CCGCCCCCTTCTCTTCTCT | 60.687 | 63.158 | 0.00 | 0.00 | 0.00 | 3.10 |
5705 | 6385 | 1.268283 | CCGCCCCCTTCTCTTCTCTT | 61.268 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5706 | 6386 | 0.176910 | CGCCCCCTTCTCTTCTCTTC | 59.823 | 60.000 | 0.00 | 0.00 | 0.00 | 2.87 |
5707 | 6387 | 1.578897 | GCCCCCTTCTCTTCTCTTCT | 58.421 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5708 | 6388 | 1.484653 | GCCCCCTTCTCTTCTCTTCTC | 59.515 | 57.143 | 0.00 | 0.00 | 0.00 | 2.87 |
5709 | 6389 | 2.892301 | GCCCCCTTCTCTTCTCTTCTCT | 60.892 | 54.545 | 0.00 | 0.00 | 0.00 | 3.10 |
5710 | 6390 | 3.449918 | CCCCCTTCTCTTCTCTTCTCTT | 58.550 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5711 | 6391 | 3.843619 | CCCCCTTCTCTTCTCTTCTCTTT | 59.156 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
5712 | 6392 | 4.081142 | CCCCCTTCTCTTCTCTTCTCTTTC | 60.081 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
5713 | 6393 | 4.081142 | CCCCTTCTCTTCTCTTCTCTTTCC | 60.081 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
5714 | 6394 | 4.381505 | CCCTTCTCTTCTCTTCTCTTTCCG | 60.382 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5715 | 6395 | 4.381505 | CCTTCTCTTCTCTTCTCTTTCCGG | 60.382 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
5716 | 6396 | 2.494073 | TCTCTTCTCTTCTCTTTCCGGC | 59.506 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
5717 | 6397 | 1.550976 | TCTTCTCTTCTCTTTCCGGCC | 59.449 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
5718 | 6398 | 1.552792 | CTTCTCTTCTCTTTCCGGCCT | 59.447 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
5719 | 6399 | 1.187087 | TCTCTTCTCTTTCCGGCCTC | 58.813 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
5720 | 6400 | 0.176910 | CTCTTCTCTTTCCGGCCTCC | 59.823 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5721 | 6401 | 1.222113 | CTTCTCTTTCCGGCCTCCC | 59.778 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
5722 | 6402 | 2.258748 | CTTCTCTTTCCGGCCTCCCC | 62.259 | 65.000 | 0.00 | 0.00 | 0.00 | 4.81 |
5723 | 6403 | 2.689034 | CTCTTTCCGGCCTCCCCT | 60.689 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
5761 | 6441 | 2.752807 | TAGCCCCTCCCAAATCCGC | 61.753 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
5764 | 6444 | 2.679342 | CCCCTCCCAAATCCGCTCA | 61.679 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
58 | 59 | 1.574428 | GCGTGGCTGTAACACCTTG | 59.426 | 57.895 | 0.00 | 0.00 | 35.46 | 3.61 |
78 | 79 | 1.154672 | CGGCATGAACACGTTGTCG | 60.155 | 57.895 | 0.00 | 0.00 | 43.34 | 4.35 |
205 | 207 | 6.086785 | TGTGTCATCAATTGCAGAAATCAA | 57.913 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
251 | 253 | 2.664402 | AAGAGTTGGAATGTGGCAGT | 57.336 | 45.000 | 0.00 | 0.00 | 0.00 | 4.40 |
276 | 278 | 0.944386 | TCGCTGCAGAAGGTTGTTTC | 59.056 | 50.000 | 20.43 | 0.00 | 0.00 | 2.78 |
284 | 286 | 1.432514 | TTGTTAGCTCGCTGCAGAAG | 58.567 | 50.000 | 20.43 | 14.88 | 45.94 | 2.85 |
286 | 288 | 2.427095 | TCTATTGTTAGCTCGCTGCAGA | 59.573 | 45.455 | 20.43 | 0.00 | 45.94 | 4.26 |
287 | 289 | 2.793790 | CTCTATTGTTAGCTCGCTGCAG | 59.206 | 50.000 | 10.11 | 10.11 | 45.94 | 4.41 |
349 | 843 | 3.322466 | CCGGCCTCCCAAGTGAGT | 61.322 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
386 | 880 | 2.857744 | CGGATGGCTACTCGACCCC | 61.858 | 68.421 | 0.00 | 0.00 | 0.00 | 4.95 |
563 | 1057 | 2.585153 | GCGTCCTTCCCCTTCCTC | 59.415 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
783 | 1303 | 4.373116 | GACAGTTCGCCGGCTCCA | 62.373 | 66.667 | 26.68 | 4.99 | 0.00 | 3.86 |
861 | 1384 | 3.873812 | GATCCGGGCCGAATGGGT | 61.874 | 66.667 | 30.79 | 6.41 | 38.44 | 4.51 |
881 | 1404 | 1.137675 | CGTTGGATGGCTCAGATCTCA | 59.862 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
882 | 1405 | 1.863267 | CGTTGGATGGCTCAGATCTC | 58.137 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
979 | 1502 | 3.412408 | GGGGCTGGAGGAAGGGAC | 61.412 | 72.222 | 0.00 | 0.00 | 0.00 | 4.46 |
980 | 1503 | 4.760220 | GGGGGCTGGAGGAAGGGA | 62.760 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
982 | 1505 | 3.415087 | CTGGGGGCTGGAGGAAGG | 61.415 | 72.222 | 0.00 | 0.00 | 0.00 | 3.46 |
983 | 1506 | 4.120755 | GCTGGGGGCTGGAGGAAG | 62.121 | 72.222 | 0.00 | 0.00 | 38.06 | 3.46 |
998 | 1521 | 2.802724 | GGTTTTGCGGGTTTGGGCT | 61.803 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
999 | 1522 | 2.280524 | GGTTTTGCGGGTTTGGGC | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
1303 | 1832 | 2.032528 | TGCGGGCTGTTGAGGAAG | 59.967 | 61.111 | 0.00 | 0.00 | 0.00 | 3.46 |
1345 | 1874 | 2.445654 | GGGAGGCAGGAGGAGAGG | 60.446 | 72.222 | 0.00 | 0.00 | 0.00 | 3.69 |
1582 | 2111 | 2.776526 | TGGCCCAGGAACCACAGT | 60.777 | 61.111 | 0.00 | 0.00 | 0.00 | 3.55 |
1703 | 2232 | 0.896923 | TTGATCCATTTGGGCAGCAC | 59.103 | 50.000 | 0.00 | 0.00 | 36.21 | 4.40 |
1801 | 2330 | 7.872993 | TCCAGTCAGTAATTGAAGACTTACTTG | 59.127 | 37.037 | 5.96 | 0.00 | 39.17 | 3.16 |
1903 | 2432 | 6.823689 | ACTCTTACACTCTGAACACAATGTTT | 59.176 | 34.615 | 0.00 | 0.00 | 41.28 | 2.83 |
1910 | 2439 | 6.129062 | CGATTTCACTCTTACACTCTGAACAC | 60.129 | 42.308 | 0.00 | 0.00 | 0.00 | 3.32 |
1960 | 2490 | 5.207110 | AGGTGCTAACTAGATGCATACTG | 57.793 | 43.478 | 0.00 | 0.00 | 39.00 | 2.74 |
1966 | 2496 | 8.436200 | CGAATTTATAAGGTGCTAACTAGATGC | 58.564 | 37.037 | 0.00 | 0.00 | 0.00 | 3.91 |
2007 | 2537 | 4.978438 | TTAGGTGTTAAACTGGTAGGCA | 57.022 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
2008 | 2538 | 5.708697 | ACATTTAGGTGTTAAACTGGTAGGC | 59.291 | 40.000 | 0.00 | 0.00 | 34.22 | 3.93 |
2009 | 2539 | 6.349033 | GCACATTTAGGTGTTAAACTGGTAGG | 60.349 | 42.308 | 0.00 | 0.00 | 40.89 | 3.18 |
2010 | 2540 | 6.349033 | GGCACATTTAGGTGTTAAACTGGTAG | 60.349 | 42.308 | 0.00 | 0.00 | 40.89 | 3.18 |
2011 | 2541 | 5.474189 | GGCACATTTAGGTGTTAAACTGGTA | 59.526 | 40.000 | 0.00 | 0.00 | 40.89 | 3.25 |
2012 | 2542 | 4.279922 | GGCACATTTAGGTGTTAAACTGGT | 59.720 | 41.667 | 0.00 | 0.00 | 40.89 | 4.00 |
2013 | 2543 | 4.321675 | GGGCACATTTAGGTGTTAAACTGG | 60.322 | 45.833 | 0.00 | 0.00 | 40.89 | 4.00 |
2014 | 2544 | 4.279671 | TGGGCACATTTAGGTGTTAAACTG | 59.720 | 41.667 | 0.00 | 0.00 | 40.89 | 3.16 |
2015 | 2545 | 4.279922 | GTGGGCACATTTAGGTGTTAAACT | 59.720 | 41.667 | 0.00 | 0.00 | 40.89 | 2.66 |
2016 | 2546 | 4.552355 | GTGGGCACATTTAGGTGTTAAAC | 58.448 | 43.478 | 0.00 | 0.00 | 40.89 | 2.01 |
2017 | 2547 | 3.253677 | CGTGGGCACATTTAGGTGTTAAA | 59.746 | 43.478 | 0.00 | 0.00 | 40.89 | 1.52 |
2018 | 2548 | 2.814919 | CGTGGGCACATTTAGGTGTTAA | 59.185 | 45.455 | 0.00 | 0.00 | 40.89 | 2.01 |
2019 | 2549 | 2.038689 | TCGTGGGCACATTTAGGTGTTA | 59.961 | 45.455 | 0.00 | 0.00 | 40.89 | 2.41 |
2020 | 2550 | 1.202830 | TCGTGGGCACATTTAGGTGTT | 60.203 | 47.619 | 0.00 | 0.00 | 40.89 | 3.32 |
2021 | 2551 | 0.398696 | TCGTGGGCACATTTAGGTGT | 59.601 | 50.000 | 0.00 | 0.00 | 40.89 | 4.16 |
2022 | 2552 | 1.468520 | CTTCGTGGGCACATTTAGGTG | 59.531 | 52.381 | 0.00 | 0.00 | 41.72 | 4.00 |
2023 | 2553 | 1.073284 | ACTTCGTGGGCACATTTAGGT | 59.927 | 47.619 | 0.00 | 0.00 | 0.00 | 3.08 |
2024 | 2554 | 1.821216 | ACTTCGTGGGCACATTTAGG | 58.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2025 | 2555 | 4.000988 | ACTTACTTCGTGGGCACATTTAG | 58.999 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
2026 | 2556 | 3.998341 | GACTTACTTCGTGGGCACATTTA | 59.002 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2027 | 2557 | 2.812011 | GACTTACTTCGTGGGCACATTT | 59.188 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
2028 | 2558 | 2.038557 | AGACTTACTTCGTGGGCACATT | 59.961 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
2029 | 2559 | 1.623811 | AGACTTACTTCGTGGGCACAT | 59.376 | 47.619 | 0.00 | 0.00 | 0.00 | 3.21 |
2030 | 2560 | 1.045407 | AGACTTACTTCGTGGGCACA | 58.955 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2031 | 2561 | 2.165319 | AAGACTTACTTCGTGGGCAC | 57.835 | 50.000 | 0.00 | 0.00 | 32.91 | 5.01 |
2032 | 2562 | 2.103432 | TCAAAGACTTACTTCGTGGGCA | 59.897 | 45.455 | 0.00 | 0.00 | 37.93 | 5.36 |
2033 | 2563 | 2.762745 | TCAAAGACTTACTTCGTGGGC | 58.237 | 47.619 | 0.00 | 0.00 | 37.93 | 5.36 |
2034 | 2564 | 7.611213 | AATAATCAAAGACTTACTTCGTGGG | 57.389 | 36.000 | 0.00 | 0.00 | 37.93 | 4.61 |
2035 | 2565 | 9.968743 | GTTAATAATCAAAGACTTACTTCGTGG | 57.031 | 33.333 | 0.00 | 0.00 | 37.93 | 4.94 |
2049 | 2579 | 9.921637 | GTCCCACATTTTCAGTTAATAATCAAA | 57.078 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
2050 | 2580 | 9.308000 | AGTCCCACATTTTCAGTTAATAATCAA | 57.692 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2051 | 2581 | 8.877864 | AGTCCCACATTTTCAGTTAATAATCA | 57.122 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
2052 | 2582 | 9.573133 | CAAGTCCCACATTTTCAGTTAATAATC | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
2053 | 2583 | 9.308000 | TCAAGTCCCACATTTTCAGTTAATAAT | 57.692 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
2054 | 2584 | 8.698973 | TCAAGTCCCACATTTTCAGTTAATAA | 57.301 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2055 | 2585 | 8.698973 | TTCAAGTCCCACATTTTCAGTTAATA | 57.301 | 30.769 | 0.00 | 0.00 | 0.00 | 0.98 |
2056 | 2586 | 7.595819 | TTCAAGTCCCACATTTTCAGTTAAT | 57.404 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2057 | 2587 | 7.595819 | ATTCAAGTCCCACATTTTCAGTTAA | 57.404 | 32.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2058 | 2588 | 7.432869 | CAATTCAAGTCCCACATTTTCAGTTA | 58.567 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
2059 | 2589 | 6.282930 | CAATTCAAGTCCCACATTTTCAGTT | 58.717 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2060 | 2590 | 5.739935 | GCAATTCAAGTCCCACATTTTCAGT | 60.740 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2061 | 2591 | 4.687483 | GCAATTCAAGTCCCACATTTTCAG | 59.313 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
2062 | 2592 | 4.100653 | TGCAATTCAAGTCCCACATTTTCA | 59.899 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
2063 | 2593 | 4.630111 | TGCAATTCAAGTCCCACATTTTC | 58.370 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
2064 | 2594 | 4.101430 | ACTGCAATTCAAGTCCCACATTTT | 59.899 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
2065 | 2595 | 3.642848 | ACTGCAATTCAAGTCCCACATTT | 59.357 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
2066 | 2596 | 3.233507 | ACTGCAATTCAAGTCCCACATT | 58.766 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
2067 | 2597 | 2.880443 | ACTGCAATTCAAGTCCCACAT | 58.120 | 42.857 | 0.00 | 0.00 | 0.00 | 3.21 |
2068 | 2598 | 2.363306 | ACTGCAATTCAAGTCCCACA | 57.637 | 45.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2069 | 2599 | 3.674997 | TCTACTGCAATTCAAGTCCCAC | 58.325 | 45.455 | 0.00 | 0.00 | 0.00 | 4.61 |
2070 | 2600 | 3.307691 | CCTCTACTGCAATTCAAGTCCCA | 60.308 | 47.826 | 0.00 | 0.00 | 0.00 | 4.37 |
2071 | 2601 | 3.274288 | CCTCTACTGCAATTCAAGTCCC | 58.726 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2072 | 2602 | 3.944087 | ACCTCTACTGCAATTCAAGTCC | 58.056 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2073 | 2603 | 8.894768 | ATTATACCTCTACTGCAATTCAAGTC | 57.105 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
2074 | 2604 | 9.331282 | GAATTATACCTCTACTGCAATTCAAGT | 57.669 | 33.333 | 0.00 | 0.00 | 33.32 | 3.16 |
2075 | 2605 | 9.553064 | AGAATTATACCTCTACTGCAATTCAAG | 57.447 | 33.333 | 0.00 | 0.00 | 34.76 | 3.02 |
2076 | 2606 | 9.330063 | CAGAATTATACCTCTACTGCAATTCAA | 57.670 | 33.333 | 0.00 | 0.00 | 34.76 | 2.69 |
2077 | 2607 | 7.933577 | CCAGAATTATACCTCTACTGCAATTCA | 59.066 | 37.037 | 0.00 | 0.00 | 34.76 | 2.57 |
2078 | 2608 | 7.934120 | ACCAGAATTATACCTCTACTGCAATTC | 59.066 | 37.037 | 0.00 | 0.00 | 33.28 | 2.17 |
2079 | 2609 | 7.806180 | ACCAGAATTATACCTCTACTGCAATT | 58.194 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
2080 | 2610 | 7.291182 | AGACCAGAATTATACCTCTACTGCAAT | 59.709 | 37.037 | 0.00 | 0.00 | 0.00 | 3.56 |
2081 | 2611 | 6.611642 | AGACCAGAATTATACCTCTACTGCAA | 59.388 | 38.462 | 0.00 | 0.00 | 0.00 | 4.08 |
2082 | 2612 | 6.040955 | CAGACCAGAATTATACCTCTACTGCA | 59.959 | 42.308 | 0.00 | 0.00 | 0.00 | 4.41 |
2083 | 2613 | 6.451393 | CAGACCAGAATTATACCTCTACTGC | 58.549 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2084 | 2614 | 6.015010 | CCCAGACCAGAATTATACCTCTACTG | 60.015 | 46.154 | 0.00 | 0.00 | 0.00 | 2.74 |
2085 | 2615 | 6.078664 | CCCAGACCAGAATTATACCTCTACT | 58.921 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2086 | 2616 | 6.075984 | TCCCAGACCAGAATTATACCTCTAC | 58.924 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2087 | 2617 | 6.289482 | TCCCAGACCAGAATTATACCTCTA | 57.711 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
2088 | 2618 | 5.157770 | TCCCAGACCAGAATTATACCTCT | 57.842 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
2089 | 2619 | 5.544176 | TGATCCCAGACCAGAATTATACCTC | 59.456 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2090 | 2620 | 5.476983 | TGATCCCAGACCAGAATTATACCT | 58.523 | 41.667 | 0.00 | 0.00 | 0.00 | 3.08 |
2091 | 2621 | 5.825593 | TGATCCCAGACCAGAATTATACC | 57.174 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
2092 | 2622 | 5.645497 | GCATGATCCCAGACCAGAATTATAC | 59.355 | 44.000 | 0.00 | 0.00 | 0.00 | 1.47 |
2093 | 2623 | 5.310331 | TGCATGATCCCAGACCAGAATTATA | 59.690 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2094 | 2624 | 4.105217 | TGCATGATCCCAGACCAGAATTAT | 59.895 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
2095 | 2625 | 3.459227 | TGCATGATCCCAGACCAGAATTA | 59.541 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2096 | 2626 | 2.242965 | TGCATGATCCCAGACCAGAATT | 59.757 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
2097 | 2627 | 1.848388 | TGCATGATCCCAGACCAGAAT | 59.152 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
2098 | 2628 | 1.288188 | TGCATGATCCCAGACCAGAA | 58.712 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2099 | 2629 | 1.514983 | ATGCATGATCCCAGACCAGA | 58.485 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2100 | 2630 | 2.359981 | AATGCATGATCCCAGACCAG | 57.640 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2101 | 2631 | 2.107031 | CCTAATGCATGATCCCAGACCA | 59.893 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2102 | 2632 | 2.373169 | TCCTAATGCATGATCCCAGACC | 59.627 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2103 | 2633 | 3.181451 | TGTCCTAATGCATGATCCCAGAC | 60.181 | 47.826 | 0.00 | 1.85 | 0.00 | 3.51 |
2104 | 2634 | 3.047857 | TGTCCTAATGCATGATCCCAGA | 58.952 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2105 | 2635 | 3.497103 | TGTCCTAATGCATGATCCCAG | 57.503 | 47.619 | 0.00 | 0.00 | 0.00 | 4.45 |
2106 | 2636 | 3.949586 | TTGTCCTAATGCATGATCCCA | 57.050 | 42.857 | 0.00 | 0.00 | 0.00 | 4.37 |
2107 | 2637 | 4.778534 | CATTGTCCTAATGCATGATCCC | 57.221 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2115 | 2645 | 1.016627 | TGCTCGCATTGTCCTAATGC | 58.983 | 50.000 | 13.12 | 13.12 | 46.97 | 3.56 |
2116 | 2646 | 3.313249 | TGATTGCTCGCATTGTCCTAATG | 59.687 | 43.478 | 0.00 | 0.00 | 0.00 | 1.90 |
2117 | 2647 | 3.544684 | TGATTGCTCGCATTGTCCTAAT | 58.455 | 40.909 | 0.00 | 0.00 | 0.00 | 1.73 |
2118 | 2648 | 2.938451 | CTGATTGCTCGCATTGTCCTAA | 59.062 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
2119 | 2649 | 2.093500 | ACTGATTGCTCGCATTGTCCTA | 60.093 | 45.455 | 0.00 | 0.00 | 0.00 | 2.94 |
2120 | 2650 | 1.339438 | ACTGATTGCTCGCATTGTCCT | 60.339 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2121 | 2651 | 1.063174 | GACTGATTGCTCGCATTGTCC | 59.937 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
2122 | 2652 | 1.733912 | TGACTGATTGCTCGCATTGTC | 59.266 | 47.619 | 0.00 | 0.68 | 0.00 | 3.18 |
2123 | 2653 | 1.466167 | GTGACTGATTGCTCGCATTGT | 59.534 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
2124 | 2654 | 1.202110 | GGTGACTGATTGCTCGCATTG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 2.82 |
2125 | 2655 | 1.089920 | GGTGACTGATTGCTCGCATT | 58.910 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
2126 | 2656 | 0.036105 | TGGTGACTGATTGCTCGCAT | 60.036 | 50.000 | 0.00 | 0.00 | 0.00 | 4.73 |
2127 | 2657 | 0.036105 | ATGGTGACTGATTGCTCGCA | 60.036 | 50.000 | 0.00 | 0.00 | 0.00 | 5.10 |
2128 | 2658 | 1.063174 | GAATGGTGACTGATTGCTCGC | 59.937 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
2129 | 2659 | 2.350804 | CAGAATGGTGACTGATTGCTCG | 59.649 | 50.000 | 0.00 | 0.00 | 36.38 | 5.03 |
2130 | 2660 | 3.341823 | ACAGAATGGTGACTGATTGCTC | 58.658 | 45.455 | 0.00 | 0.00 | 43.62 | 4.26 |
2131 | 2661 | 3.430042 | ACAGAATGGTGACTGATTGCT | 57.570 | 42.857 | 0.00 | 0.00 | 43.62 | 3.91 |
2132 | 2662 | 5.412594 | TCTTAACAGAATGGTGACTGATTGC | 59.587 | 40.000 | 0.00 | 0.00 | 35.42 | 3.56 |
2133 | 2663 | 6.652481 | ACTCTTAACAGAATGGTGACTGATTG | 59.348 | 38.462 | 0.00 | 0.00 | 35.42 | 2.67 |
2134 | 2664 | 6.652481 | CACTCTTAACAGAATGGTGACTGATT | 59.348 | 38.462 | 0.00 | 0.00 | 35.42 | 2.57 |
2135 | 2665 | 6.169094 | CACTCTTAACAGAATGGTGACTGAT | 58.831 | 40.000 | 0.00 | 0.00 | 35.42 | 2.90 |
2136 | 2666 | 5.070446 | ACACTCTTAACAGAATGGTGACTGA | 59.930 | 40.000 | 0.00 | 0.00 | 35.42 | 3.41 |
2137 | 2667 | 5.178252 | CACACTCTTAACAGAATGGTGACTG | 59.822 | 44.000 | 0.00 | 0.00 | 35.42 | 3.51 |
2138 | 2668 | 5.070446 | TCACACTCTTAACAGAATGGTGACT | 59.930 | 40.000 | 0.00 | 0.00 | 35.42 | 3.41 |
2139 | 2669 | 5.297547 | TCACACTCTTAACAGAATGGTGAC | 58.702 | 41.667 | 0.00 | 0.00 | 35.42 | 3.67 |
2140 | 2670 | 5.304357 | TCTCACACTCTTAACAGAATGGTGA | 59.696 | 40.000 | 0.00 | 0.00 | 35.42 | 4.02 |
2141 | 2671 | 5.541845 | TCTCACACTCTTAACAGAATGGTG | 58.458 | 41.667 | 0.00 | 0.00 | 35.42 | 4.17 |
2142 | 2672 | 5.305644 | ACTCTCACACTCTTAACAGAATGGT | 59.694 | 40.000 | 0.00 | 0.00 | 43.62 | 3.55 |
2143 | 2673 | 5.636965 | CACTCTCACACTCTTAACAGAATGG | 59.363 | 44.000 | 0.00 | 0.00 | 43.62 | 3.16 |
2144 | 2674 | 6.450545 | TCACTCTCACACTCTTAACAGAATG | 58.549 | 40.000 | 0.00 | 0.00 | 46.00 | 2.67 |
2145 | 2675 | 6.656632 | TCACTCTCACACTCTTAACAGAAT | 57.343 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
2146 | 2676 | 6.465439 | TTCACTCTCACACTCTTAACAGAA | 57.535 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
2147 | 2677 | 6.465439 | TTTCACTCTCACACTCTTAACAGA | 57.535 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
2148 | 2678 | 6.088749 | CGATTTCACTCTCACACTCTTAACAG | 59.911 | 42.308 | 0.00 | 0.00 | 0.00 | 3.16 |
2149 | 2679 | 5.920840 | CGATTTCACTCTCACACTCTTAACA | 59.079 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2150 | 2680 | 5.921408 | ACGATTTCACTCTCACACTCTTAAC | 59.079 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2151 | 2681 | 6.085555 | ACGATTTCACTCTCACACTCTTAA | 57.914 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
2152 | 2682 | 5.335740 | GGACGATTTCACTCTCACACTCTTA | 60.336 | 44.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2153 | 2683 | 4.551388 | GACGATTTCACTCTCACACTCTT | 58.449 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
2154 | 2684 | 3.057174 | GGACGATTTCACTCTCACACTCT | 60.057 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
2155 | 2685 | 3.246619 | GGACGATTTCACTCTCACACTC | 58.753 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2156 | 2686 | 2.628178 | TGGACGATTTCACTCTCACACT | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
2157 | 2687 | 3.026630 | TGGACGATTTCACTCTCACAC | 57.973 | 47.619 | 0.00 | 0.00 | 0.00 | 3.82 |
2158 | 2688 | 3.588955 | CATGGACGATTTCACTCTCACA | 58.411 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
2159 | 2689 | 2.932614 | CCATGGACGATTTCACTCTCAC | 59.067 | 50.000 | 5.56 | 0.00 | 0.00 | 3.51 |
2160 | 2690 | 2.677902 | GCCATGGACGATTTCACTCTCA | 60.678 | 50.000 | 18.40 | 0.00 | 0.00 | 3.27 |
2161 | 2691 | 1.936547 | GCCATGGACGATTTCACTCTC | 59.063 | 52.381 | 18.40 | 0.00 | 0.00 | 3.20 |
2162 | 2692 | 1.278985 | TGCCATGGACGATTTCACTCT | 59.721 | 47.619 | 18.40 | 0.00 | 0.00 | 3.24 |
2163 | 2693 | 1.398390 | GTGCCATGGACGATTTCACTC | 59.602 | 52.381 | 18.40 | 0.00 | 0.00 | 3.51 |
2164 | 2694 | 1.271325 | TGTGCCATGGACGATTTCACT | 60.271 | 47.619 | 18.40 | 0.00 | 0.00 | 3.41 |
2165 | 2695 | 1.164411 | TGTGCCATGGACGATTTCAC | 58.836 | 50.000 | 18.40 | 12.56 | 0.00 | 3.18 |
2166 | 2696 | 2.127271 | ATGTGCCATGGACGATTTCA | 57.873 | 45.000 | 18.40 | 0.00 | 0.00 | 2.69 |
2167 | 2697 | 3.181397 | CAAATGTGCCATGGACGATTTC | 58.819 | 45.455 | 18.40 | 0.00 | 0.00 | 2.17 |
2168 | 2698 | 2.674747 | GCAAATGTGCCATGGACGATTT | 60.675 | 45.455 | 18.40 | 12.19 | 45.68 | 2.17 |
2169 | 2699 | 1.135024 | GCAAATGTGCCATGGACGATT | 60.135 | 47.619 | 18.40 | 6.33 | 45.68 | 3.34 |
2170 | 2700 | 0.457035 | GCAAATGTGCCATGGACGAT | 59.543 | 50.000 | 18.40 | 0.00 | 45.68 | 3.73 |
2171 | 2701 | 1.882311 | GCAAATGTGCCATGGACGA | 59.118 | 52.632 | 18.40 | 0.00 | 45.68 | 4.20 |
2172 | 2702 | 4.481870 | GCAAATGTGCCATGGACG | 57.518 | 55.556 | 18.40 | 0.00 | 45.68 | 4.79 |
2188 | 2718 | 8.553459 | AACTAGATGTATACTATGCCAATTGC | 57.447 | 34.615 | 4.17 | 0.00 | 41.77 | 3.56 |
2190 | 2720 | 9.877178 | GCTAACTAGATGTATACTATGCCAATT | 57.123 | 33.333 | 4.17 | 0.00 | 0.00 | 2.32 |
2191 | 2721 | 9.035890 | TGCTAACTAGATGTATACTATGCCAAT | 57.964 | 33.333 | 4.17 | 0.00 | 0.00 | 3.16 |
2192 | 2722 | 8.304596 | GTGCTAACTAGATGTATACTATGCCAA | 58.695 | 37.037 | 4.17 | 0.00 | 0.00 | 4.52 |
2193 | 2723 | 7.093902 | GGTGCTAACTAGATGTATACTATGCCA | 60.094 | 40.741 | 4.17 | 0.00 | 0.00 | 4.92 |
2194 | 2724 | 7.122948 | AGGTGCTAACTAGATGTATACTATGCC | 59.877 | 40.741 | 4.17 | 0.00 | 0.00 | 4.40 |
2195 | 2725 | 8.057536 | AGGTGCTAACTAGATGTATACTATGC | 57.942 | 38.462 | 4.17 | 0.00 | 0.00 | 3.14 |
2204 | 2734 | 9.477484 | CGAATTTATAAGGTGCTAACTAGATGT | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
2205 | 2735 | 9.477484 | ACGAATTTATAAGGTGCTAACTAGATG | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2209 | 2739 | 9.533253 | GGTAACGAATTTATAAGGTGCTAACTA | 57.467 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2210 | 2740 | 8.429493 | GGTAACGAATTTATAAGGTGCTAACT | 57.571 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
2230 | 2760 | 2.381725 | AGGCAGCTAACTTCGGTAAC | 57.618 | 50.000 | 0.00 | 0.00 | 0.00 | 2.50 |
2231 | 2761 | 2.159338 | CGTAGGCAGCTAACTTCGGTAA | 60.159 | 50.000 | 7.63 | 0.00 | 0.00 | 2.85 |
2232 | 2762 | 1.402968 | CGTAGGCAGCTAACTTCGGTA | 59.597 | 52.381 | 7.63 | 0.00 | 0.00 | 4.02 |
2233 | 2763 | 0.172803 | CGTAGGCAGCTAACTTCGGT | 59.827 | 55.000 | 7.63 | 0.00 | 0.00 | 4.69 |
2234 | 2764 | 0.454600 | TCGTAGGCAGCTAACTTCGG | 59.545 | 55.000 | 13.26 | 0.00 | 0.00 | 4.30 |
2235 | 2765 | 1.132643 | ACTCGTAGGCAGCTAACTTCG | 59.867 | 52.381 | 8.82 | 8.82 | 0.00 | 3.79 |
2236 | 2766 | 2.943449 | ACTCGTAGGCAGCTAACTTC | 57.057 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2237 | 2767 | 3.679824 | AAACTCGTAGGCAGCTAACTT | 57.320 | 42.857 | 0.00 | 0.00 | 0.00 | 2.66 |
2238 | 2768 | 4.021719 | TGTTAAACTCGTAGGCAGCTAACT | 60.022 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
2239 | 2769 | 4.091075 | GTGTTAAACTCGTAGGCAGCTAAC | 59.909 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
2240 | 2770 | 4.240096 | GTGTTAAACTCGTAGGCAGCTAA | 58.760 | 43.478 | 0.00 | 0.00 | 0.00 | 3.09 |
2241 | 2771 | 3.367703 | GGTGTTAAACTCGTAGGCAGCTA | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
2242 | 2772 | 2.612221 | GGTGTTAAACTCGTAGGCAGCT | 60.612 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2243 | 2773 | 1.730612 | GGTGTTAAACTCGTAGGCAGC | 59.269 | 52.381 | 0.00 | 0.00 | 0.00 | 5.25 |
2244 | 2774 | 3.314541 | AGGTGTTAAACTCGTAGGCAG | 57.685 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
2323 | 2854 | 7.967908 | TGATCCCAGACTAGAATTTAATCTCC | 58.032 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
2336 | 2867 | 4.492646 | TCCTAATGCATGATCCCAGACTA | 58.507 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
2345 | 2876 | 4.083110 | GCTTGCGTTATCCTAATGCATGAT | 60.083 | 41.667 | 21.56 | 1.12 | 41.25 | 2.45 |
2362 | 2893 | 1.806542 | ACTGGTGACTAATTGCTTGCG | 59.193 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
2363 | 2894 | 2.554032 | ACACTGGTGACTAATTGCTTGC | 59.446 | 45.455 | 7.78 | 0.00 | 0.00 | 4.01 |
2455 | 2986 | 6.420913 | ACAGGTATCCAGCTATCGTAATTT | 57.579 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
2491 | 3022 | 0.685097 | GTCTAACCCACAGGCTGACA | 59.315 | 55.000 | 23.66 | 0.00 | 36.11 | 3.58 |
2582 | 3116 | 5.659440 | ACACCAAATCACCCATACATTTC | 57.341 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
2604 | 3138 | 4.779489 | GGAACCCTACCAAACTACTCCTAA | 59.221 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
2643 | 3185 | 6.017109 | ACCAAATATGTTGAGTGTGTCAAGAC | 60.017 | 38.462 | 0.00 | 0.00 | 46.18 | 3.01 |
2654 | 3199 | 9.153721 | ACATGCAAATTTACCAAATATGTTGAG | 57.846 | 29.630 | 0.00 | 0.00 | 27.43 | 3.02 |
2672 | 3217 | 5.657826 | AATGTTATACCAGCACATGCAAA | 57.342 | 34.783 | 6.64 | 0.00 | 45.16 | 3.68 |
2712 | 3257 | 3.746492 | AGTGGCGAAAAGTAAGCTAACAG | 59.254 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
2723 | 3268 | 4.561735 | TGGACTAAAAAGTGGCGAAAAG | 57.438 | 40.909 | 0.00 | 0.00 | 0.00 | 2.27 |
2728 | 3274 | 3.915437 | ACATTGGACTAAAAAGTGGCG | 57.085 | 42.857 | 0.00 | 0.00 | 0.00 | 5.69 |
2763 | 3309 | 2.028112 | ACAGAGAAAGCCGCAGAACATA | 60.028 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
2772 | 3318 | 2.213499 | ACAACTTCACAGAGAAAGCCG | 58.787 | 47.619 | 0.00 | 0.00 | 35.40 | 5.52 |
2782 | 3328 | 2.684001 | ACAACGGAGACAACTTCACA | 57.316 | 45.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2912 | 3458 | 4.454504 | AGTTAGCACATAAAAAGGGACACG | 59.545 | 41.667 | 0.00 | 0.00 | 0.00 | 4.49 |
2920 | 3466 | 6.016943 | ACGGCAAGTTAGTTAGCACATAAAAA | 60.017 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
2933 | 3479 | 4.583073 | AGAAAATTTCCACGGCAAGTTAGT | 59.417 | 37.500 | 1.57 | 0.00 | 0.00 | 2.24 |
3304 | 3850 | 0.524816 | CAACATCTTGCCATGCGAGC | 60.525 | 55.000 | 0.00 | 0.00 | 39.71 | 5.03 |
3366 | 3912 | 6.402222 | AGATAAGAAAGAAGCGACAGTGAAT | 58.598 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3385 | 3931 | 7.539710 | CAGTACACGCAACAGTTAACTAGATAA | 59.460 | 37.037 | 8.04 | 0.00 | 0.00 | 1.75 |
3774 | 4320 | 8.400186 | TCATGTTGATTTATGTGCAGACAATAG | 58.600 | 33.333 | 0.00 | 0.00 | 35.11 | 1.73 |
3931 | 4477 | 1.806542 | GCGGTCAGATGCTGAAAAAGA | 59.193 | 47.619 | 0.00 | 0.00 | 42.46 | 2.52 |
4027 | 4573 | 1.202452 | TGCGTCGAGATGCTTCATGAT | 60.202 | 47.619 | 16.93 | 0.00 | 43.48 | 2.45 |
4081 | 4627 | 4.406069 | CCGCAATACTTGTTCATCAACAG | 58.594 | 43.478 | 0.00 | 0.00 | 43.54 | 3.16 |
4245 | 4791 | 0.168128 | GCACATCAGGTTTGCCGTAC | 59.832 | 55.000 | 0.00 | 0.00 | 40.50 | 3.67 |
4287 | 4833 | 1.009389 | GCTGGACCTGTTCGAAGTCG | 61.009 | 60.000 | 0.00 | 0.00 | 41.45 | 4.18 |
4308 | 4854 | 5.072872 | AGCATATCCTCCTCATACAGCTTTT | 59.927 | 40.000 | 0.00 | 0.00 | 0.00 | 2.27 |
4365 | 4911 | 0.524862 | CTTCAAGCGCTGGCAATCTT | 59.475 | 50.000 | 12.58 | 0.00 | 43.41 | 2.40 |
4399 | 4946 | 0.387929 | TCCGCGCTAGGATTTCGATT | 59.612 | 50.000 | 5.56 | 0.00 | 34.92 | 3.34 |
4403 | 4950 | 0.876342 | CTGGTCCGCGCTAGGATTTC | 60.876 | 60.000 | 5.56 | 1.00 | 43.04 | 2.17 |
4419 | 4966 | 3.257561 | CGGAACTGCGCGATCTGG | 61.258 | 66.667 | 12.10 | 0.00 | 0.00 | 3.86 |
4430 | 4977 | 2.665603 | GGCTCAGGCTTCGGAACT | 59.334 | 61.111 | 0.00 | 0.00 | 38.73 | 3.01 |
4454 | 5001 | 2.432444 | CTTGCTTTAATCCACGGTCCA | 58.568 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
4538 | 5085 | 6.924913 | TCATCTCTAATACAGCTGCCTATT | 57.075 | 37.500 | 15.27 | 13.62 | 0.00 | 1.73 |
4609 | 5159 | 5.713025 | TCTGCTCAAATTGGAATTTACAGC | 58.287 | 37.500 | 15.15 | 15.15 | 40.48 | 4.40 |
4633 | 5183 | 1.285023 | CTGCTGCAGCTGTTTGTCC | 59.715 | 57.895 | 36.61 | 7.74 | 42.66 | 4.02 |
4634 | 5184 | 4.937781 | CTGCTGCAGCTGTTTGTC | 57.062 | 55.556 | 36.61 | 8.49 | 42.66 | 3.18 |
4650 | 5201 | 3.855668 | ACTATATCTTCCTCCTGCTGCT | 58.144 | 45.455 | 0.00 | 0.00 | 0.00 | 4.24 |
4677 | 5231 | 6.039717 | ACAACACTACAAAGCATGTTTCTCAT | 59.960 | 34.615 | 0.00 | 0.00 | 43.63 | 2.90 |
4696 | 5250 | 3.250040 | ACTCACATTTTCGGCTACAACAC | 59.750 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
4717 | 5271 | 2.542595 | ACGTTAGCAGTACAAGTTGCAC | 59.457 | 45.455 | 1.81 | 0.00 | 42.67 | 4.57 |
4724 | 5278 | 3.135225 | ACATTGCACGTTAGCAGTACAA | 58.865 | 40.909 | 0.57 | 0.00 | 46.54 | 2.41 |
4757 | 5311 | 2.699954 | AGAGATAAACTTGTGCACCCG | 58.300 | 47.619 | 15.69 | 7.69 | 0.00 | 5.28 |
4789 | 5390 | 5.924254 | CCAACAAGTGACTTCGATTGTACTA | 59.076 | 40.000 | 0.00 | 0.00 | 34.92 | 1.82 |
4805 | 5406 | 5.185056 | GGATAAACTTATGCACCCAACAAGT | 59.815 | 40.000 | 0.00 | 0.00 | 32.48 | 3.16 |
4808 | 5409 | 4.704540 | CAGGATAAACTTATGCACCCAACA | 59.295 | 41.667 | 0.00 | 0.00 | 34.37 | 3.33 |
4810 | 5411 | 4.704540 | CACAGGATAAACTTATGCACCCAA | 59.295 | 41.667 | 0.00 | 0.00 | 34.37 | 4.12 |
4829 | 5430 | 1.406539 | AGCAGCAAACAAGTTCCACAG | 59.593 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
4937 | 5538 | 1.152902 | GCATATGCACCCCAGAGCA | 60.153 | 57.895 | 22.84 | 0.00 | 43.97 | 4.26 |
5048 | 5678 | 2.033299 | CGAAGCACTGTCACCATGTTTT | 59.967 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
5053 | 5683 | 0.392706 | TGACGAAGCACTGTCACCAT | 59.607 | 50.000 | 0.00 | 0.00 | 40.02 | 3.55 |
5060 | 5690 | 3.673746 | TTTTTCACTGACGAAGCACTG | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 3.66 |
5119 | 5769 | 4.035675 | GGGAGGAAAGTATTTTGATCTGCG | 59.964 | 45.833 | 0.00 | 0.00 | 39.27 | 5.18 |
5213 | 5874 | 2.220313 | CCTGCCCACCAAAAATGTTTG | 58.780 | 47.619 | 0.93 | 0.93 | 43.26 | 2.93 |
5234 | 5895 | 1.528129 | GGCTCTTGGTAGCATATGCC | 58.472 | 55.000 | 23.96 | 9.68 | 44.64 | 4.40 |
5235 | 5896 | 1.151668 | CGGCTCTTGGTAGCATATGC | 58.848 | 55.000 | 20.36 | 20.36 | 44.64 | 3.14 |
5244 | 5905 | 0.625849 | AATCCAATCCGGCTCTTGGT | 59.374 | 50.000 | 22.03 | 11.93 | 42.13 | 3.67 |
5335 | 5996 | 3.435186 | GCCCAGAAGAACCAGCGC | 61.435 | 66.667 | 0.00 | 0.00 | 0.00 | 5.92 |
5340 | 6001 | 2.496899 | TCATCTTGCCCAGAAGAACC | 57.503 | 50.000 | 0.00 | 0.00 | 35.60 | 3.62 |
5440 | 6106 | 8.945057 | GCATCAGCAATTTAAAATCCCTAAAAA | 58.055 | 29.630 | 0.00 | 0.00 | 41.58 | 1.94 |
5441 | 6107 | 7.552330 | GGCATCAGCAATTTAAAATCCCTAAAA | 59.448 | 33.333 | 0.00 | 0.00 | 44.61 | 1.52 |
5442 | 6108 | 7.047271 | GGCATCAGCAATTTAAAATCCCTAAA | 58.953 | 34.615 | 0.00 | 0.00 | 44.61 | 1.85 |
5443 | 6109 | 6.155910 | TGGCATCAGCAATTTAAAATCCCTAA | 59.844 | 34.615 | 0.00 | 0.00 | 44.61 | 2.69 |
5444 | 6110 | 5.660417 | TGGCATCAGCAATTTAAAATCCCTA | 59.340 | 36.000 | 0.00 | 0.00 | 44.61 | 3.53 |
5445 | 6111 | 4.470664 | TGGCATCAGCAATTTAAAATCCCT | 59.529 | 37.500 | 0.00 | 0.00 | 44.61 | 4.20 |
5446 | 6112 | 4.768583 | TGGCATCAGCAATTTAAAATCCC | 58.231 | 39.130 | 0.00 | 0.00 | 44.61 | 3.85 |
5447 | 6113 | 5.277634 | GCATGGCATCAGCAATTTAAAATCC | 60.278 | 40.000 | 0.00 | 0.00 | 44.61 | 3.01 |
5448 | 6114 | 5.526111 | AGCATGGCATCAGCAATTTAAAATC | 59.474 | 36.000 | 11.77 | 0.00 | 44.61 | 2.17 |
5449 | 6115 | 5.433526 | AGCATGGCATCAGCAATTTAAAAT | 58.566 | 33.333 | 11.77 | 0.00 | 44.61 | 1.82 |
5454 | 6120 | 2.737359 | CGAAGCATGGCATCAGCAATTT | 60.737 | 45.455 | 11.77 | 0.00 | 44.61 | 1.82 |
5457 | 6123 | 1.804598 | CGAAGCATGGCATCAGCAA | 59.195 | 52.632 | 11.77 | 0.00 | 44.61 | 3.91 |
5523 | 6189 | 4.058124 | GGGAGGCTGAACAATTGTTTTTC | 58.942 | 43.478 | 24.02 | 12.88 | 38.56 | 2.29 |
5563 | 6229 | 7.476540 | TCGTATTGGGCTGTAGTGATATTAT | 57.523 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
5564 | 6230 | 6.904463 | TCGTATTGGGCTGTAGTGATATTA | 57.096 | 37.500 | 0.00 | 0.00 | 0.00 | 0.98 |
5565 | 6231 | 5.801531 | TCGTATTGGGCTGTAGTGATATT | 57.198 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
5566 | 6232 | 5.539048 | GTTCGTATTGGGCTGTAGTGATAT | 58.461 | 41.667 | 0.00 | 0.00 | 0.00 | 1.63 |
5691 | 6371 | 4.381505 | CGGAAAGAGAAGAGAAGAGAAGGG | 60.382 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
5702 | 6382 | 1.265454 | GGGAGGCCGGAAAGAGAAGA | 61.265 | 60.000 | 5.05 | 0.00 | 0.00 | 2.87 |
5703 | 6383 | 1.222113 | GGGAGGCCGGAAAGAGAAG | 59.778 | 63.158 | 5.05 | 0.00 | 0.00 | 2.85 |
5704 | 6384 | 2.298661 | GGGGAGGCCGGAAAGAGAA | 61.299 | 63.158 | 5.05 | 0.00 | 0.00 | 2.87 |
5705 | 6385 | 2.687566 | GGGGAGGCCGGAAAGAGA | 60.688 | 66.667 | 5.05 | 0.00 | 0.00 | 3.10 |
5706 | 6386 | 2.689034 | AGGGGAGGCCGGAAAGAG | 60.689 | 66.667 | 5.05 | 0.00 | 0.00 | 2.85 |
5707 | 6387 | 2.687566 | GAGGGGAGGCCGGAAAGA | 60.688 | 66.667 | 5.05 | 0.00 | 0.00 | 2.52 |
5708 | 6388 | 2.689034 | AGAGGGGAGGCCGGAAAG | 60.689 | 66.667 | 5.05 | 0.00 | 0.00 | 2.62 |
5709 | 6389 | 2.687566 | GAGAGGGGAGGCCGGAAA | 60.688 | 66.667 | 5.05 | 0.00 | 0.00 | 3.13 |
5710 | 6390 | 4.798682 | GGAGAGGGGAGGCCGGAA | 62.799 | 72.222 | 5.05 | 0.00 | 0.00 | 4.30 |
5713 | 6393 | 4.806339 | AAGGGAGAGGGGAGGCCG | 62.806 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
5714 | 6394 | 2.770475 | GAAGGGAGAGGGGAGGCC | 60.770 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
5715 | 6395 | 1.764454 | GAGAAGGGAGAGGGGAGGC | 60.764 | 68.421 | 0.00 | 0.00 | 0.00 | 4.70 |
5716 | 6396 | 1.074850 | GGAGAAGGGAGAGGGGAGG | 60.075 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
5717 | 6397 | 0.105709 | GAGGAGAAGGGAGAGGGGAG | 60.106 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5718 | 6398 | 1.939082 | CGAGGAGAAGGGAGAGGGGA | 61.939 | 65.000 | 0.00 | 0.00 | 0.00 | 4.81 |
5719 | 6399 | 1.456705 | CGAGGAGAAGGGAGAGGGG | 60.457 | 68.421 | 0.00 | 0.00 | 0.00 | 4.79 |
5720 | 6400 | 2.131067 | GCGAGGAGAAGGGAGAGGG | 61.131 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
5721 | 6401 | 2.131067 | GGCGAGGAGAAGGGAGAGG | 61.131 | 68.421 | 0.00 | 0.00 | 0.00 | 3.69 |
5722 | 6402 | 2.485795 | CGGCGAGGAGAAGGGAGAG | 61.486 | 68.421 | 0.00 | 0.00 | 0.00 | 3.20 |
5723 | 6403 | 2.440430 | CGGCGAGGAGAAGGGAGA | 60.440 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
5729 | 6409 | 4.189188 | GCTACGCGGCGAGGAGAA | 62.189 | 66.667 | 30.94 | 2.06 | 0.00 | 2.87 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.