Multiple sequence alignment - TraesCS3D01G327600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G327600 chr3D 100.000 6872 0 0 1 6872 439683725 439676854 0.000000e+00 12691.0
1 TraesCS3D01G327600 chr3D 96.721 122 3 1 4122 4242 401178932 401179053 1.170000e-47 202.0
2 TraesCS3D01G327600 chr3A 94.942 1799 42 18 281 2052 579383228 579381452 0.000000e+00 2772.0
3 TraesCS3D01G327600 chr3A 92.217 1773 121 11 2053 3814 579381357 579379591 0.000000e+00 2494.0
4 TraesCS3D01G327600 chr3A 90.361 1162 70 19 4422 5555 579379100 579377953 0.000000e+00 1487.0
5 TraesCS3D01G327600 chr3A 89.971 698 53 7 5594 6281 579377952 579377262 0.000000e+00 885.0
6 TraesCS3D01G327600 chr3A 91.514 436 24 7 6448 6872 579377015 579376582 7.680000e-164 588.0
7 TraesCS3D01G327600 chr3A 93.040 273 9 3 3861 4123 579379603 579379331 2.320000e-104 390.0
8 TraesCS3D01G327600 chr3A 87.892 223 14 4 4 215 579386878 579386658 4.120000e-62 250.0
9 TraesCS3D01G327600 chr3A 95.172 145 6 1 4237 4380 579379332 579379188 1.930000e-55 228.0
10 TraesCS3D01G327600 chr3A 94.815 135 5 2 173 305 579386640 579386506 6.980000e-50 209.0
11 TraesCS3D01G327600 chr3B 92.918 1892 58 36 172 2025 576455762 576453909 0.000000e+00 2682.0
12 TraesCS3D01G327600 chr3B 91.704 1350 70 20 4237 5555 576451643 576450305 0.000000e+00 1834.0
13 TraesCS3D01G327600 chr3B 93.853 846 48 4 2055 2899 576453484 576452642 0.000000e+00 1271.0
14 TraesCS3D01G327600 chr3B 89.710 758 66 6 3059 3814 576452641 576451894 0.000000e+00 957.0
15 TraesCS3D01G327600 chr3B 89.670 697 58 5 5594 6281 576450304 576449613 0.000000e+00 876.0
16 TraesCS3D01G327600 chr3B 85.427 597 48 19 6280 6872 576449515 576448954 9.930000e-163 584.0
17 TraesCS3D01G327600 chr3B 96.604 265 7 1 3861 4123 576451906 576451642 8.180000e-119 438.0
18 TraesCS3D01G327600 chr3B 97.521 121 3 0 4122 4242 545060808 545060688 2.510000e-49 207.0
19 TraesCS3D01G327600 chr7D 90.369 623 41 11 1765 2379 504424672 504424061 0.000000e+00 800.0
20 TraesCS3D01G327600 chr7D 97.468 237 6 0 2471 2707 504424059 504423823 8.300000e-109 405.0
21 TraesCS3D01G327600 chr7B 92.802 514 32 3 2066 2575 703817111 703816599 0.000000e+00 739.0
22 TraesCS3D01G327600 chr7B 92.398 513 34 3 2067 2575 121028234 121027723 0.000000e+00 726.0
23 TraesCS3D01G327600 chr7B 91.700 506 36 4 2068 2569 26716632 26716129 0.000000e+00 697.0
24 TraesCS3D01G327600 chr7B 98.291 117 2 0 4122 4238 517095073 517095189 9.030000e-49 206.0
25 TraesCS3D01G327600 chr1B 91.829 514 34 6 2066 2575 654383244 654383753 0.000000e+00 710.0
26 TraesCS3D01G327600 chr1B 87.879 66 8 0 3501 3566 156567041 156566976 2.050000e-10 78.7
27 TraesCS3D01G327600 chr6B 96.774 124 4 0 4115 4238 179276012 179276135 2.510000e-49 207.0
28 TraesCS3D01G327600 chr6B 97.521 121 3 0 4121 4241 470914947 470914827 2.510000e-49 207.0
29 TraesCS3D01G327600 chr6D 97.500 120 3 0 4122 4241 329858710 329858591 9.030000e-49 206.0
30 TraesCS3D01G327600 chr4B 97.521 121 2 1 4119 4239 636915230 636915349 9.030000e-49 206.0
31 TraesCS3D01G327600 chr2D 97.500 120 3 0 4122 4241 305940255 305940136 9.030000e-49 206.0
32 TraesCS3D01G327600 chr2D 96.063 127 4 1 4113 4238 418057644 418057518 9.030000e-49 206.0
33 TraesCS3D01G327600 chr1D 87.879 66 8 0 3501 3566 97214988 97215053 2.050000e-10 78.7
34 TraesCS3D01G327600 chr1A 87.879 66 8 0 3501 3566 91603400 91603465 2.050000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G327600 chr3D 439676854 439683725 6871 True 12691.000000 12691 100.000000 1 6872 1 chr3D.!!$R1 6871
1 TraesCS3D01G327600 chr3A 579376582 579386878 10296 True 1033.666667 2772 92.213778 4 6872 9 chr3A.!!$R1 6868
2 TraesCS3D01G327600 chr3B 576448954 576455762 6808 True 1234.571429 2682 91.412286 172 6872 7 chr3B.!!$R2 6700
3 TraesCS3D01G327600 chr7D 504423823 504424672 849 True 602.500000 800 93.918500 1765 2707 2 chr7D.!!$R1 942
4 TraesCS3D01G327600 chr7B 703816599 703817111 512 True 739.000000 739 92.802000 2066 2575 1 chr7B.!!$R3 509
5 TraesCS3D01G327600 chr7B 121027723 121028234 511 True 726.000000 726 92.398000 2067 2575 1 chr7B.!!$R2 508
6 TraesCS3D01G327600 chr7B 26716129 26716632 503 True 697.000000 697 91.700000 2068 2569 1 chr7B.!!$R1 501
7 TraesCS3D01G327600 chr1B 654383244 654383753 509 False 710.000000 710 91.829000 2066 2575 1 chr1B.!!$F1 509

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
910 4300 0.744771 GGCGGCTTCGGAGAAAGAAT 60.745 55.0 0.0 0.0 45.90 2.40 F
1763 5185 0.251165 ACATTGTGTGTGTAGGGGGC 60.251 55.0 0.0 0.0 40.28 5.80 F
3518 7363 0.318784 AACAGTCACTTCGCCGTCTC 60.319 55.0 0.0 0.0 0.00 3.36 F
3844 7689 0.179020 TGTTCCACTGAGCCACTTGG 60.179 55.0 0.0 0.0 38.53 3.61 F
3849 7694 0.397941 CACTGAGCCACTTGGGAGAA 59.602 55.0 0.0 0.0 40.01 2.87 F
3850 7695 0.398318 ACTGAGCCACTTGGGAGAAC 59.602 55.0 0.0 0.0 40.01 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2263 6092 0.308684 CAGAAGCAGAAAAGCACGCA 59.691 50.000 0.00 0.00 36.85 5.24 R
3622 7467 0.036010 ACCATGCTACCACAGAGTGC 60.036 55.000 0.00 0.00 31.34 4.40 R
4873 8785 0.322546 CACTCACTAAGTTGGGCCCC 60.323 60.000 22.27 4.15 35.45 5.80 R
5742 9673 0.108945 GCATCTGCTGAAGGGTTTGC 60.109 55.000 0.00 0.00 38.21 3.68 R
5784 9715 0.740164 CAAGCAGAGCTCGTGCAGAT 60.740 55.000 28.21 17.02 43.82 2.90 R
5902 9833 8.924303 ACACTCAAGATACAGCACCTAATATTA 58.076 33.333 0.00 0.00 0.00 0.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.445493 CCGTTTCAAAATACTTAGTTATTCGGT 58.555 33.333 0.00 0.00 0.00 4.69
43 44 5.425630 AGTTATTCGGTTCCATTAGGACAC 58.574 41.667 0.00 0.00 45.73 3.67
57 58 2.438411 AGGACACACGTTTGACCAAAA 58.562 42.857 22.01 0.00 31.33 2.44
58 59 2.422127 AGGACACACGTTTGACCAAAAG 59.578 45.455 22.01 6.83 36.18 2.27
134 139 6.487668 AGGTACTTGTTTACGGTTATGCTTTT 59.512 34.615 0.00 0.00 27.25 2.27
144 149 6.320494 ACGGTTATGCTTTTGTATCAACAA 57.680 33.333 0.00 0.00 43.85 2.83
148 153 8.018520 CGGTTATGCTTTTGTATCAACAACTTA 58.981 33.333 0.00 0.00 45.18 2.24
151 156 9.767684 TTATGCTTTTGTATCAACAACTTATCG 57.232 29.630 0.00 0.00 45.18 2.92
152 157 7.197071 TGCTTTTGTATCAACAACTTATCGT 57.803 32.000 0.00 0.00 45.18 3.73
401 3786 2.083774 CAAATAGTTGCCCTGAAGCGA 58.916 47.619 0.00 0.00 34.65 4.93
579 3964 0.882927 CGGGACTCGCAAAACCAAGA 60.883 55.000 0.00 0.00 0.00 3.02
699 4084 2.232298 CTCTCCCAGCTTCCACCGTC 62.232 65.000 0.00 0.00 0.00 4.79
910 4300 0.744771 GGCGGCTTCGGAGAAAGAAT 60.745 55.000 0.00 0.00 45.90 2.40
1029 4419 3.063197 GCGAGGAGGAGGAGGAGGA 62.063 68.421 0.00 0.00 0.00 3.71
1250 4650 2.292794 TACGAGCCCTGATTGCCGAC 62.293 60.000 0.00 0.00 0.00 4.79
1462 4865 1.079612 GGGATTTGGTTGCTGCTGC 60.080 57.895 8.89 8.89 40.20 5.25
1694 5108 0.745468 TGCACGTTTGGGGTTAAACC 59.255 50.000 0.00 0.00 37.27 3.27
1721 5135 9.801873 CATGGGGTAATAATTTGAACAAAGTAG 57.198 33.333 11.77 0.00 34.87 2.57
1731 5153 8.652810 AATTTGAACAAAGTAGTACTACGTGT 57.347 30.769 26.77 26.77 40.80 4.49
1752 5174 6.588756 CGTGTTAGGAGTGTAATACATTGTGT 59.411 38.462 0.00 0.00 0.00 3.72
1759 5181 6.312918 GGAGTGTAATACATTGTGTGTGTAGG 59.687 42.308 0.00 0.00 42.24 3.18
1760 5182 6.170506 AGTGTAATACATTGTGTGTGTAGGG 58.829 40.000 0.00 0.00 42.24 3.53
1761 5183 5.353123 GTGTAATACATTGTGTGTGTAGGGG 59.647 44.000 0.00 0.00 42.24 4.79
1762 5184 3.644966 ATACATTGTGTGTGTAGGGGG 57.355 47.619 0.00 0.00 42.24 5.40
1763 5185 0.251165 ACATTGTGTGTGTAGGGGGC 60.251 55.000 0.00 0.00 40.28 5.80
1867 5296 9.659830 GAACCAAATATATTTATCACACGTTCC 57.340 33.333 10.34 0.00 0.00 3.62
1926 5355 1.472082 TGCGACCGATGCAATTGAATT 59.528 42.857 10.34 0.00 39.87 2.17
2034 5732 7.212976 GGCATAGGATGTAGTATGTGATATGG 58.787 42.308 0.00 0.00 0.00 2.74
2094 5923 2.153366 AAATTTCTTGCAGCCCAACG 57.847 45.000 0.00 0.00 0.00 4.10
2201 6030 1.438651 TTCAGCACAAGTATGTCGCC 58.561 50.000 0.00 0.00 37.82 5.54
2217 6046 1.000955 TCGCCCTTTTCTCAGTCAGTC 59.999 52.381 0.00 0.00 0.00 3.51
2262 6091 4.280174 CCACTCATTTCAATCATGGATCCC 59.720 45.833 9.90 0.00 0.00 3.85
2263 6092 5.138276 CACTCATTTCAATCATGGATCCCT 58.862 41.667 9.90 0.00 0.00 4.20
2264 6093 5.009710 CACTCATTTCAATCATGGATCCCTG 59.990 44.000 9.90 10.29 0.00 4.45
2265 6094 3.893200 TCATTTCAATCATGGATCCCTGC 59.107 43.478 9.90 0.00 0.00 4.85
2266 6095 1.971481 TTCAATCATGGATCCCTGCG 58.029 50.000 9.90 2.21 0.00 5.18
2267 6096 0.839277 TCAATCATGGATCCCTGCGT 59.161 50.000 9.90 0.00 0.00 5.24
2280 6109 0.386478 CCTGCGTGCTTTTCTGCTTC 60.386 55.000 0.00 0.00 0.00 3.86
2285 6114 2.913613 CGTGCTTTTCTGCTTCTGAAG 58.086 47.619 13.02 13.02 0.00 3.02
2287 6116 3.188048 CGTGCTTTTCTGCTTCTGAAGAT 59.812 43.478 21.06 0.00 0.00 2.40
2295 6125 9.520204 CTTTTCTGCTTCTGAAGATTTTACAAA 57.480 29.630 21.06 8.40 0.00 2.83
2569 6403 4.344390 TCTCCGACTGATCTAGCTACTACA 59.656 45.833 0.00 0.00 0.00 2.74
2730 6564 4.219115 AGGACTGATACATCAACGGATCT 58.781 43.478 0.00 0.00 36.18 2.75
2752 6586 5.077134 TGGATATAGACATTGATGAGCGG 57.923 43.478 0.00 0.00 0.00 5.52
2814 6648 2.076100 GACCGTCTCATTGTGATTGCA 58.924 47.619 0.00 0.00 0.00 4.08
2901 6735 4.881920 TGTTTCCTTGCAATTAAAGAGCC 58.118 39.130 0.00 0.00 0.00 4.70
2904 6738 3.945346 TCCTTGCAATTAAAGAGCCGTA 58.055 40.909 0.00 0.00 0.00 4.02
2911 6745 6.862209 TGCAATTAAAGAGCCGTATGAATTT 58.138 32.000 0.00 0.00 0.00 1.82
2925 6760 7.696872 GCCGTATGAATTTCCTAAAAGTCTTTC 59.303 37.037 0.00 0.00 39.57 2.62
2999 6834 5.127491 TGTTAGTGTTAAGGTCCTTTGGTG 58.873 41.667 10.04 0.00 0.00 4.17
3001 6836 1.611977 GTGTTAAGGTCCTTTGGTGGC 59.388 52.381 10.04 0.00 0.00 5.01
3003 6838 0.475044 TTAAGGTCCTTTGGTGGCGT 59.525 50.000 10.04 0.00 0.00 5.68
3004 6839 0.475044 TAAGGTCCTTTGGTGGCGTT 59.525 50.000 10.04 0.00 0.00 4.84
3029 6864 9.856162 TTAGTTAGATACCTTGTTCCTGTTTTT 57.144 29.630 0.00 0.00 0.00 1.94
3030 6865 8.166422 AGTTAGATACCTTGTTCCTGTTTTTG 57.834 34.615 0.00 0.00 0.00 2.44
3069 6904 5.184864 TGTTTGAGTCTGTTTGGACATTTGT 59.815 36.000 0.00 0.00 38.57 2.83
3072 6907 4.704540 TGAGTCTGTTTGGACATTTGTGTT 59.295 37.500 0.00 0.00 38.57 3.32
3078 6913 7.169140 GTCTGTTTGGACATTTGTGTTATTTCC 59.831 37.037 0.00 0.00 34.72 3.13
3083 6918 7.767250 TGGACATTTGTGTTATTTCCACATA 57.233 32.000 0.00 0.00 42.05 2.29
3190 7026 5.819379 AGTAGCACCATTATCTTCACACATG 59.181 40.000 0.00 0.00 0.00 3.21
3195 7031 5.645067 CACCATTATCTTCACACATGACAGT 59.355 40.000 0.00 0.00 33.38 3.55
3246 7082 3.133691 TCTCATTGACACAGTTGCTGAC 58.866 45.455 2.91 0.00 35.18 3.51
3254 7090 4.881273 TGACACAGTTGCTGACAAATACTT 59.119 37.500 2.91 0.00 37.58 2.24
3256 7092 6.540551 TGACACAGTTGCTGACAAATACTTTA 59.459 34.615 2.91 0.00 37.58 1.85
3261 7097 3.006940 TGCTGACAAATACTTTAGCGGG 58.993 45.455 0.00 0.00 34.07 6.13
3267 7103 6.440436 TGACAAATACTTTAGCGGGTTTTTC 58.560 36.000 0.00 0.00 0.00 2.29
3268 7104 5.775686 ACAAATACTTTAGCGGGTTTTTCC 58.224 37.500 0.00 0.00 0.00 3.13
3276 7119 7.170277 ACTTTAGCGGGTTTTTCCTAATTCTA 58.830 34.615 0.00 0.00 36.25 2.10
3283 7126 8.410912 GCGGGTTTTTCCTAATTCTATTTATGT 58.589 33.333 0.00 0.00 36.25 2.29
3317 7160 8.575649 TTAGTATGAGCGATCATCTTATACCA 57.424 34.615 21.12 0.00 35.10 3.25
3381 7224 4.673375 CAGCTTGCTGCCCCCACT 62.673 66.667 9.78 0.00 44.23 4.00
3417 7260 5.846203 AGTGACAAATCAAGGGACAAATTG 58.154 37.500 0.00 0.00 36.31 2.32
3462 7305 6.539826 CACTACATATCTGATGCTTTGGTCAA 59.460 38.462 0.00 0.00 0.00 3.18
3474 7317 4.082081 TGCTTTGGTCAAATGATGATCCAC 60.082 41.667 0.00 0.00 38.49 4.02
3485 7328 8.514594 TCAAATGATGATCCACTGTTTAAAGAC 58.485 33.333 0.00 0.00 31.50 3.01
3518 7363 0.318784 AACAGTCACTTCGCCGTCTC 60.319 55.000 0.00 0.00 0.00 3.36
3570 7415 4.065789 CCGTTTAAGAAAGAAGGTGAGCT 58.934 43.478 0.00 0.00 0.00 4.09
3582 7427 7.856145 AAGAAGGTGAGCTTGTATATTCTTG 57.144 36.000 0.00 0.00 35.17 3.02
3589 7434 7.912250 GGTGAGCTTGTATATTCTTGAAATGTG 59.088 37.037 0.00 0.00 0.00 3.21
3598 7443 9.869844 GTATATTCTTGAAATGTGCACTCATAC 57.130 33.333 19.41 7.95 0.00 2.39
3599 7444 8.743085 ATATTCTTGAAATGTGCACTCATACT 57.257 30.769 19.41 2.74 0.00 2.12
3622 7467 3.376234 AGATTCCATTTGTGATGTGCTCG 59.624 43.478 0.00 0.00 0.00 5.03
3625 7470 1.609932 CATTTGTGATGTGCTCGCAC 58.390 50.000 14.75 14.75 43.90 5.34
3626 7471 1.198408 CATTTGTGATGTGCTCGCACT 59.802 47.619 21.14 8.35 43.90 4.40
3644 7489 2.497675 CACTCTGTGGTAGCATGGTAGT 59.502 50.000 4.51 0.00 0.00 2.73
3646 7491 3.583086 ACTCTGTGGTAGCATGGTAGTTT 59.417 43.478 4.51 0.00 0.00 2.66
3654 7499 6.859508 GTGGTAGCATGGTAGTTTGTTTAAAC 59.140 38.462 11.54 11.54 45.13 2.01
3663 7508 7.419204 TGGTAGTTTGTTTAAACAGTGTATGC 58.581 34.615 19.72 9.84 46.76 3.14
3664 7509 7.283580 TGGTAGTTTGTTTAAACAGTGTATGCT 59.716 33.333 19.72 13.11 46.76 3.79
3676 7521 6.668541 ACAGTGTATGCTGTATCATTTCAC 57.331 37.500 0.00 0.00 46.68 3.18
3690 7535 8.325787 TGTATCATTTCACCCTAAAGCTTTAGA 58.674 33.333 36.80 21.81 42.05 2.10
3729 7574 2.161855 TGTGCTAGGCAATCTTTGTGG 58.838 47.619 0.00 0.00 41.47 4.17
3807 7652 9.722184 GTTATCATCTTAACCCTACCTATTTCC 57.278 37.037 0.00 0.00 0.00 3.13
3808 7653 6.758806 TCATCTTAACCCTACCTATTTCCC 57.241 41.667 0.00 0.00 0.00 3.97
3809 7654 5.609708 TCATCTTAACCCTACCTATTTCCCC 59.390 44.000 0.00 0.00 0.00 4.81
3810 7655 3.969312 TCTTAACCCTACCTATTTCCCCG 59.031 47.826 0.00 0.00 0.00 5.73
3811 7656 2.275361 AACCCTACCTATTTCCCCGT 57.725 50.000 0.00 0.00 0.00 5.28
3812 7657 2.275361 ACCCTACCTATTTCCCCGTT 57.725 50.000 0.00 0.00 0.00 4.44
3813 7658 2.565631 ACCCTACCTATTTCCCCGTTT 58.434 47.619 0.00 0.00 0.00 3.60
3814 7659 2.921612 ACCCTACCTATTTCCCCGTTTT 59.078 45.455 0.00 0.00 0.00 2.43
3815 7660 3.054139 ACCCTACCTATTTCCCCGTTTTC 60.054 47.826 0.00 0.00 0.00 2.29
3816 7661 3.201487 CCCTACCTATTTCCCCGTTTTCT 59.799 47.826 0.00 0.00 0.00 2.52
3817 7662 4.324797 CCCTACCTATTTCCCCGTTTTCTT 60.325 45.833 0.00 0.00 0.00 2.52
3818 7663 4.880120 CCTACCTATTTCCCCGTTTTCTTC 59.120 45.833 0.00 0.00 0.00 2.87
3819 7664 4.652679 ACCTATTTCCCCGTTTTCTTCT 57.347 40.909 0.00 0.00 0.00 2.85
3820 7665 5.767277 ACCTATTTCCCCGTTTTCTTCTA 57.233 39.130 0.00 0.00 0.00 2.10
3821 7666 6.323210 ACCTATTTCCCCGTTTTCTTCTAT 57.677 37.500 0.00 0.00 0.00 1.98
3822 7667 6.120220 ACCTATTTCCCCGTTTTCTTCTATG 58.880 40.000 0.00 0.00 0.00 2.23
3823 7668 6.120220 CCTATTTCCCCGTTTTCTTCTATGT 58.880 40.000 0.00 0.00 0.00 2.29
3824 7669 7.092757 ACCTATTTCCCCGTTTTCTTCTATGTA 60.093 37.037 0.00 0.00 0.00 2.29
3825 7670 7.937394 CCTATTTCCCCGTTTTCTTCTATGTAT 59.063 37.037 0.00 0.00 0.00 2.29
3826 7671 6.995511 TTTCCCCGTTTTCTTCTATGTATG 57.004 37.500 0.00 0.00 0.00 2.39
3827 7672 5.687166 TCCCCGTTTTCTTCTATGTATGT 57.313 39.130 0.00 0.00 0.00 2.29
3828 7673 6.057321 TCCCCGTTTTCTTCTATGTATGTT 57.943 37.500 0.00 0.00 0.00 2.71
3829 7674 6.110707 TCCCCGTTTTCTTCTATGTATGTTC 58.889 40.000 0.00 0.00 0.00 3.18
3830 7675 5.296035 CCCCGTTTTCTTCTATGTATGTTCC 59.704 44.000 0.00 0.00 0.00 3.62
3831 7676 5.878116 CCCGTTTTCTTCTATGTATGTTCCA 59.122 40.000 0.00 0.00 0.00 3.53
3832 7677 6.183360 CCCGTTTTCTTCTATGTATGTTCCAC 60.183 42.308 0.00 0.00 0.00 4.02
3833 7678 6.594159 CCGTTTTCTTCTATGTATGTTCCACT 59.406 38.462 0.00 0.00 0.00 4.00
3834 7679 7.413000 CCGTTTTCTTCTATGTATGTTCCACTG 60.413 40.741 0.00 0.00 0.00 3.66
3835 7680 7.330946 CGTTTTCTTCTATGTATGTTCCACTGA 59.669 37.037 0.00 0.00 0.00 3.41
3836 7681 8.660373 GTTTTCTTCTATGTATGTTCCACTGAG 58.340 37.037 0.00 0.00 0.00 3.35
3837 7682 5.907207 TCTTCTATGTATGTTCCACTGAGC 58.093 41.667 0.00 0.00 0.00 4.26
3838 7683 4.672587 TCTATGTATGTTCCACTGAGCC 57.327 45.455 0.00 0.00 0.00 4.70
3839 7684 4.030216 TCTATGTATGTTCCACTGAGCCA 58.970 43.478 0.00 0.00 0.00 4.75
3840 7685 2.472695 TGTATGTTCCACTGAGCCAC 57.527 50.000 0.00 0.00 0.00 5.01
3841 7686 1.977854 TGTATGTTCCACTGAGCCACT 59.022 47.619 0.00 0.00 0.00 4.00
3842 7687 2.371841 TGTATGTTCCACTGAGCCACTT 59.628 45.455 0.00 0.00 0.00 3.16
3843 7688 1.901591 ATGTTCCACTGAGCCACTTG 58.098 50.000 0.00 0.00 0.00 3.16
3844 7689 0.179020 TGTTCCACTGAGCCACTTGG 60.179 55.000 0.00 0.00 38.53 3.61
3845 7690 0.890996 GTTCCACTGAGCCACTTGGG 60.891 60.000 0.00 0.00 40.85 4.12
3846 7691 1.059584 TTCCACTGAGCCACTTGGGA 61.060 55.000 0.00 0.00 40.01 4.37
3847 7692 1.002868 CCACTGAGCCACTTGGGAG 60.003 63.158 0.00 0.00 40.01 4.30
3848 7693 1.483595 CCACTGAGCCACTTGGGAGA 61.484 60.000 0.00 0.00 40.01 3.71
3849 7694 0.397941 CACTGAGCCACTTGGGAGAA 59.602 55.000 0.00 0.00 40.01 2.87
3850 7695 0.398318 ACTGAGCCACTTGGGAGAAC 59.602 55.000 0.00 0.00 40.01 3.01
3851 7696 0.689623 CTGAGCCACTTGGGAGAACT 59.310 55.000 0.00 0.00 40.01 3.01
3852 7697 1.902508 CTGAGCCACTTGGGAGAACTA 59.097 52.381 0.00 0.00 40.01 2.24
3853 7698 2.503356 CTGAGCCACTTGGGAGAACTAT 59.497 50.000 0.00 0.00 40.01 2.12
3854 7699 2.912956 TGAGCCACTTGGGAGAACTATT 59.087 45.455 0.00 0.00 40.01 1.73
3855 7700 3.330701 TGAGCCACTTGGGAGAACTATTT 59.669 43.478 0.00 0.00 40.01 1.40
3856 7701 3.690460 AGCCACTTGGGAGAACTATTTG 58.310 45.455 0.00 0.00 40.01 2.32
3857 7702 2.164422 GCCACTTGGGAGAACTATTTGC 59.836 50.000 0.00 0.00 40.01 3.68
3858 7703 3.420893 CCACTTGGGAGAACTATTTGCA 58.579 45.455 0.00 0.00 40.01 4.08
3859 7704 4.019174 CCACTTGGGAGAACTATTTGCAT 58.981 43.478 0.00 0.00 40.01 3.96
3976 7821 5.008712 TCGTCAACAGGTATATGCTCTACAG 59.991 44.000 0.00 0.00 0.00 2.74
4111 7964 2.616842 CAGCGGGTGGAAATGGTAATAC 59.383 50.000 0.00 0.00 0.00 1.89
4115 7968 4.202284 GCGGGTGGAAATGGTAATACTCTA 60.202 45.833 0.00 0.00 0.00 2.43
4116 7969 5.685599 GCGGGTGGAAATGGTAATACTCTAA 60.686 44.000 0.00 0.00 0.00 2.10
4117 7970 5.989777 CGGGTGGAAATGGTAATACTCTAAG 59.010 44.000 0.00 0.00 0.00 2.18
4118 7971 6.407752 CGGGTGGAAATGGTAATACTCTAAGT 60.408 42.308 0.00 0.00 0.00 2.24
4119 7972 7.201938 CGGGTGGAAATGGTAATACTCTAAGTA 60.202 40.741 0.00 0.00 34.82 2.24
4131 7984 7.999450 AATACTCTAAGTATTACTCCCTCCG 57.001 40.000 9.95 0.00 46.38 4.63
4132 7985 5.385628 ACTCTAAGTATTACTCCCTCCGT 57.614 43.478 0.00 0.00 0.00 4.69
4133 7986 5.764432 ACTCTAAGTATTACTCCCTCCGTT 58.236 41.667 0.00 0.00 0.00 4.44
4134 7987 5.827267 ACTCTAAGTATTACTCCCTCCGTTC 59.173 44.000 0.00 0.00 0.00 3.95
4135 7988 4.818546 TCTAAGTATTACTCCCTCCGTTCG 59.181 45.833 0.00 0.00 0.00 3.95
4136 7989 2.305009 AGTATTACTCCCTCCGTTCGG 58.695 52.381 4.74 4.74 0.00 4.30
4137 7990 2.092212 AGTATTACTCCCTCCGTTCGGA 60.092 50.000 13.34 13.34 0.00 4.55
4138 7991 1.856629 ATTACTCCCTCCGTTCGGAA 58.143 50.000 14.79 0.04 33.41 4.30
4139 7992 1.856629 TTACTCCCTCCGTTCGGAAT 58.143 50.000 14.79 2.09 33.41 3.01
4140 7993 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
4141 7994 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4142 7995 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4143 7996 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4144 7997 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4145 7998 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4146 7999 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4147 8000 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4148 8001 3.581755 CTCCGTTCGGAATTACTTGTCA 58.418 45.455 14.79 0.00 33.41 3.58
4149 8002 3.319755 TCCGTTCGGAATTACTTGTCAC 58.680 45.455 11.66 0.00 0.00 3.67
4150 8003 3.061322 CCGTTCGGAATTACTTGTCACA 58.939 45.455 5.19 0.00 0.00 3.58
4151 8004 3.495377 CCGTTCGGAATTACTTGTCACAA 59.505 43.478 5.19 0.00 0.00 3.33
4152 8005 4.024725 CCGTTCGGAATTACTTGTCACAAA 60.025 41.667 5.19 0.00 0.00 2.83
4153 8006 5.503498 CGTTCGGAATTACTTGTCACAAAA 58.497 37.500 0.00 0.00 0.00 2.44
4154 8007 5.966503 CGTTCGGAATTACTTGTCACAAAAA 59.033 36.000 0.00 0.00 0.00 1.94
4155 8008 6.635239 CGTTCGGAATTACTTGTCACAAAAAT 59.365 34.615 0.00 0.00 0.00 1.82
4156 8009 7.799447 CGTTCGGAATTACTTGTCACAAAAATA 59.201 33.333 0.00 0.00 0.00 1.40
4157 8010 9.113876 GTTCGGAATTACTTGTCACAAAAATAG 57.886 33.333 0.00 0.00 0.00 1.73
4158 8011 8.610248 TCGGAATTACTTGTCACAAAAATAGA 57.390 30.769 0.00 0.00 0.00 1.98
4159 8012 9.226606 TCGGAATTACTTGTCACAAAAATAGAT 57.773 29.630 0.00 0.00 0.00 1.98
4213 8066 9.553064 ACATCTAGATACATTCATTTCTTGGAC 57.447 33.333 4.54 0.00 0.00 4.02
4214 8067 8.706936 CATCTAGATACATTCATTTCTTGGACG 58.293 37.037 4.54 0.00 0.00 4.79
4215 8068 8.007405 TCTAGATACATTCATTTCTTGGACGA 57.993 34.615 0.00 0.00 0.00 4.20
4216 8069 8.138074 TCTAGATACATTCATTTCTTGGACGAG 58.862 37.037 0.00 0.00 0.00 4.18
4217 8070 6.644347 AGATACATTCATTTCTTGGACGAGT 58.356 36.000 0.00 0.00 0.00 4.18
4218 8071 7.782049 AGATACATTCATTTCTTGGACGAGTA 58.218 34.615 0.00 0.00 0.00 2.59
4219 8072 8.258007 AGATACATTCATTTCTTGGACGAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
4220 8073 8.964476 ATACATTCATTTCTTGGACGAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
4221 8074 7.687941 ACATTCATTTCTTGGACGAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
4222 8075 7.752695 ACATTCATTTCTTGGACGAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
4223 8076 6.737254 TTCATTTCTTGGACGAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
4224 8077 4.868171 TCATTTCTTGGACGAGTAATTCCG 59.132 41.667 0.00 0.00 0.00 4.30
4225 8078 4.524316 TTTCTTGGACGAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
4226 8079 4.524316 TTCTTGGACGAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
4227 8080 3.841643 TCTTGGACGAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
4228 8081 2.267188 TGGACGAGTAATTCCGAACG 57.733 50.000 0.00 0.00 0.00 3.95
4229 8082 1.135315 TGGACGAGTAATTCCGAACGG 60.135 52.381 6.94 6.94 0.00 4.44
4230 8083 1.133025 GGACGAGTAATTCCGAACGGA 59.867 52.381 12.04 12.04 43.52 4.69
4231 8084 2.448219 GACGAGTAATTCCGAACGGAG 58.552 52.381 15.34 5.60 46.06 4.63
4232 8085 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
4233 8086 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
4234 8087 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
4235 8088 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4258 8111 8.585881 GGAGTAGATTGGTATCAGCAGTATTAA 58.414 37.037 0.00 0.00 32.95 1.40
4389 8244 2.364970 TGATTTGTTGGCCTTTGGTGAG 59.635 45.455 3.32 0.00 0.00 3.51
4433 8334 5.587443 TGGCTTCAGATCATCTTACACAATG 59.413 40.000 0.00 0.00 0.00 2.82
4488 8397 5.580022 ACTTACATTATCCTTGGCCTTTGT 58.420 37.500 3.32 0.00 0.00 2.83
4496 8405 1.043022 CTTGGCCTTTGTTGAAGCCT 58.957 50.000 3.32 0.00 34.56 4.58
4515 8424 5.807909 AGCCTGATTTTTGTGCCATAATTT 58.192 33.333 0.00 0.00 0.00 1.82
4544 8453 7.446931 TCAGTGCCTTTTATGTTAATGTTCTGA 59.553 33.333 0.00 0.00 0.00 3.27
4545 8454 8.246180 CAGTGCCTTTTATGTTAATGTTCTGAT 58.754 33.333 0.00 0.00 0.00 2.90
4897 8810 3.383505 GGCCCAACTTAGTGAGTGTTTTT 59.616 43.478 0.00 0.00 39.00 1.94
4970 8888 8.849543 AGTTACCATATTTCCCTGTAGTTCTA 57.150 34.615 0.00 0.00 0.00 2.10
5032 8950 2.634940 AGAACCTCTTACTGAGCAGCAA 59.365 45.455 0.00 0.00 41.35 3.91
5077 8995 4.142609 ACAGTCTTCTCAACAAGCTGAA 57.857 40.909 0.00 0.00 34.39 3.02
5101 9019 2.644299 TGCTCTTTCTCAAGGGATGGAA 59.356 45.455 0.00 0.00 31.02 3.53
5285 9203 5.067023 GCAGTTGCTATTTCCTCTGCTTAAT 59.933 40.000 7.56 0.00 42.98 1.40
5287 9205 7.201732 GCAGTTGCTATTTCCTCTGCTTAATTA 60.202 37.037 7.56 0.00 42.98 1.40
5301 9219 6.320926 TCTGCTTAATTAGTTGCCATATTGCA 59.679 34.615 0.00 0.00 40.07 4.08
5328 9246 3.572255 GTGTTTTGGGCAGACTATTTGGA 59.428 43.478 0.00 0.00 0.00 3.53
5329 9247 4.220602 GTGTTTTGGGCAGACTATTTGGAT 59.779 41.667 0.00 0.00 0.00 3.41
5331 9249 6.096846 GTGTTTTGGGCAGACTATTTGGATAT 59.903 38.462 0.00 0.00 0.00 1.63
5333 9251 6.713762 TTTGGGCAGACTATTTGGATATTG 57.286 37.500 0.00 0.00 0.00 1.90
5334 9252 5.387113 TGGGCAGACTATTTGGATATTGT 57.613 39.130 0.00 0.00 0.00 2.71
5335 9253 6.508030 TGGGCAGACTATTTGGATATTGTA 57.492 37.500 0.00 0.00 0.00 2.41
5337 9255 7.526041 TGGGCAGACTATTTGGATATTGTAAT 58.474 34.615 0.00 0.00 0.00 1.89
5338 9256 8.664992 TGGGCAGACTATTTGGATATTGTAATA 58.335 33.333 0.00 0.00 0.00 0.98
5339 9257 9.686683 GGGCAGACTATTTGGATATTGTAATAT 57.313 33.333 0.00 0.00 34.41 1.28
5365 9283 7.436933 TGTACAGTAATATGCTCTGATCCTTG 58.563 38.462 0.00 0.00 33.93 3.61
5378 9296 6.545298 GCTCTGATCCTTGTTTTGGAGAATAT 59.455 38.462 0.00 0.00 36.99 1.28
5426 9348 2.029918 CGTGTTCTCACCACTCAGATCA 60.030 50.000 0.00 0.00 41.09 2.92
5430 9352 4.241681 GTTCTCACCACTCAGATCAAGTC 58.758 47.826 0.00 0.00 0.00 3.01
5467 9391 8.113462 TGCCCCTTTTCTACTTCATTACTAAAT 58.887 33.333 0.00 0.00 0.00 1.40
5468 9392 8.406297 GCCCCTTTTCTACTTCATTACTAAATG 58.594 37.037 0.00 0.00 43.32 2.32
5483 9411 1.156736 AAATGACTTCCTTCACCGCG 58.843 50.000 0.00 0.00 0.00 6.46
5486 9414 4.295119 ACTTCCTTCACCGCGCGT 62.295 61.111 29.95 14.24 0.00 6.01
5496 9424 2.098298 CCGCGCGTTCCATTTCTG 59.902 61.111 29.95 4.86 0.00 3.02
5502 9430 1.401409 CGCGTTCCATTTCTGTTGCAT 60.401 47.619 0.00 0.00 0.00 3.96
5503 9431 2.253603 GCGTTCCATTTCTGTTGCATC 58.746 47.619 0.00 0.00 0.00 3.91
5543 9473 4.824537 GGAGAATGAATTTAGGAGCTTCCC 59.175 45.833 0.00 0.00 37.19 3.97
5552 9482 2.808906 AGGAGCTTCCCAATGTTACC 57.191 50.000 0.00 0.00 37.19 2.85
5555 9485 2.007608 GAGCTTCCCAATGTTACCGAC 58.992 52.381 0.00 0.00 0.00 4.79
5556 9486 1.349688 AGCTTCCCAATGTTACCGACA 59.650 47.619 0.00 0.00 43.71 4.35
5557 9487 1.737793 GCTTCCCAATGTTACCGACAG 59.262 52.381 0.00 0.00 42.62 3.51
5558 9488 2.614481 GCTTCCCAATGTTACCGACAGA 60.614 50.000 0.00 0.00 42.62 3.41
5559 9489 3.873910 CTTCCCAATGTTACCGACAGAT 58.126 45.455 0.00 0.00 42.62 2.90
5560 9490 4.682320 GCTTCCCAATGTTACCGACAGATA 60.682 45.833 0.00 0.00 42.62 1.98
5561 9491 5.423704 TTCCCAATGTTACCGACAGATAA 57.576 39.130 0.00 0.00 42.62 1.75
5562 9492 5.623956 TCCCAATGTTACCGACAGATAAT 57.376 39.130 0.00 0.00 42.62 1.28
5563 9493 6.734502 TCCCAATGTTACCGACAGATAATA 57.265 37.500 0.00 0.00 42.62 0.98
5564 9494 6.755206 TCCCAATGTTACCGACAGATAATAG 58.245 40.000 0.00 0.00 42.62 1.73
5565 9495 6.551975 TCCCAATGTTACCGACAGATAATAGA 59.448 38.462 0.00 0.00 42.62 1.98
5566 9496 7.070198 TCCCAATGTTACCGACAGATAATAGAA 59.930 37.037 0.00 0.00 42.62 2.10
5567 9497 7.385205 CCCAATGTTACCGACAGATAATAGAAG 59.615 40.741 0.00 0.00 42.62 2.85
5568 9498 7.926555 CCAATGTTACCGACAGATAATAGAAGT 59.073 37.037 0.00 0.00 42.62 3.01
5569 9499 8.969267 CAATGTTACCGACAGATAATAGAAGTC 58.031 37.037 0.00 0.00 42.62 3.01
5570 9500 7.035840 TGTTACCGACAGATAATAGAAGTCC 57.964 40.000 0.00 0.00 33.40 3.85
5571 9501 6.040166 TGTTACCGACAGATAATAGAAGTCCC 59.960 42.308 0.00 0.00 33.40 4.46
5572 9502 4.543689 ACCGACAGATAATAGAAGTCCCA 58.456 43.478 0.00 0.00 0.00 4.37
5573 9503 4.960469 ACCGACAGATAATAGAAGTCCCAA 59.040 41.667 0.00 0.00 0.00 4.12
5574 9504 5.424252 ACCGACAGATAATAGAAGTCCCAAA 59.576 40.000 0.00 0.00 0.00 3.28
5575 9505 6.070424 ACCGACAGATAATAGAAGTCCCAAAA 60.070 38.462 0.00 0.00 0.00 2.44
5576 9506 6.480320 CCGACAGATAATAGAAGTCCCAAAAG 59.520 42.308 0.00 0.00 0.00 2.27
5577 9507 7.265673 CGACAGATAATAGAAGTCCCAAAAGA 58.734 38.462 0.00 0.00 0.00 2.52
5578 9508 7.764443 CGACAGATAATAGAAGTCCCAAAAGAA 59.236 37.037 0.00 0.00 0.00 2.52
5579 9509 9.449719 GACAGATAATAGAAGTCCCAAAAGAAA 57.550 33.333 0.00 0.00 0.00 2.52
5580 9510 9.454859 ACAGATAATAGAAGTCCCAAAAGAAAG 57.545 33.333 0.00 0.00 0.00 2.62
5581 9511 9.454859 CAGATAATAGAAGTCCCAAAAGAAAGT 57.545 33.333 0.00 0.00 0.00 2.66
5592 9522 9.338622 AGTCCCAAAAGAAAGTAAATATATCGG 57.661 33.333 0.00 0.00 0.00 4.18
5612 9542 2.486918 GGCTTTCAGCTGCACATTTTT 58.513 42.857 9.47 0.00 41.99 1.94
5616 9546 2.798976 TCAGCTGCACATTTTTCACC 57.201 45.000 9.47 0.00 0.00 4.02
5633 9563 3.538591 TCACCTGAACTGATGCATCATC 58.461 45.455 28.81 23.43 40.88 2.92
5634 9564 3.054948 TCACCTGAACTGATGCATCATCA 60.055 43.478 28.81 26.31 46.84 3.07
5645 9575 3.969466 TGCATCATCAAATAAGGGGGA 57.031 42.857 0.00 0.00 0.00 4.81
5650 9580 5.420104 GCATCATCAAATAAGGGGGAATAGG 59.580 44.000 0.00 0.00 0.00 2.57
5667 9597 9.201989 GGGGAATAGGAAGAAAACATAGAAAAT 57.798 33.333 0.00 0.00 0.00 1.82
5706 9637 4.422073 TCAACTGGTGATGAACTGTTCT 57.578 40.909 20.18 7.08 0.00 3.01
5736 9667 6.183361 TGTCTTATCTGCAGGCTGATAATCTT 60.183 38.462 24.39 5.00 42.06 2.40
5739 9670 2.432146 TCTGCAGGCTGATAATCTTCGT 59.568 45.455 20.86 0.00 0.00 3.85
5742 9673 2.799412 GCAGGCTGATAATCTTCGTCTG 59.201 50.000 20.86 0.00 0.00 3.51
5784 9715 1.937223 CGCATATTAACCACTCGCCAA 59.063 47.619 0.00 0.00 0.00 4.52
5853 9784 2.735823 GCTTTGAGTTCACTTTGGCTG 58.264 47.619 0.00 0.00 0.00 4.85
5880 9811 4.261031 CGTCCACGGGAATAAATTGAATCC 60.261 45.833 0.00 0.00 31.38 3.01
5931 9862 3.071602 AGGTGCTGTATCTTGAGTGTTGT 59.928 43.478 0.00 0.00 0.00 3.32
5933 9864 4.389077 GGTGCTGTATCTTGAGTGTTGTAC 59.611 45.833 0.00 0.00 0.00 2.90
5983 9914 5.688220 TCCCTACTCCCTAGATTCTTCAT 57.312 43.478 0.00 0.00 0.00 2.57
6004 9935 1.571919 ATGTTCTTGTATCGGCGAGC 58.428 50.000 17.22 11.50 0.00 5.03
6025 9956 4.639310 AGCAGTTTGGATCAGAATCATGTC 59.361 41.667 0.00 0.00 33.21 3.06
6027 9958 5.448768 GCAGTTTGGATCAGAATCATGTCAG 60.449 44.000 0.00 0.00 33.21 3.51
6031 9962 4.774124 TGGATCAGAATCATGTCAGGAAC 58.226 43.478 0.00 0.00 33.21 3.62
6032 9963 4.225717 TGGATCAGAATCATGTCAGGAACA 59.774 41.667 0.00 0.00 43.51 3.18
6040 9971 4.280436 TCATGTCAGGAACATTTACGGT 57.720 40.909 0.00 0.00 46.73 4.83
6041 9972 4.000325 TCATGTCAGGAACATTTACGGTG 59.000 43.478 0.00 0.00 46.73 4.94
6079 10010 2.236893 TGCTGCCTGTAGATGACATCAA 59.763 45.455 17.57 2.21 37.45 2.57
6084 10015 6.512415 GCTGCCTGTAGATGACATCAAATTAC 60.512 42.308 17.57 10.99 37.45 1.89
6106 10037 6.780706 ACCAACTATTGAACAAGTTCGTAG 57.219 37.500 16.78 16.78 42.28 3.51
6131 10063 6.429385 GCATTTTTGAAAACATGGGGATGTAA 59.571 34.615 0.00 0.00 33.81 2.41
6147 10079 8.004215 TGGGGATGTAAATACTTGCAGAATAAT 58.996 33.333 0.00 0.00 30.13 1.28
6170 10102 8.991783 AATTTGAGATCCTATGATGTGATGTT 57.008 30.769 0.00 0.00 0.00 2.71
6198 10138 8.911918 TGTGGTGTATAATCGCCTAAATAAAT 57.088 30.769 0.00 0.00 38.63 1.40
6211 10151 5.106673 GCCTAAATAAATCATACCGCCTGAC 60.107 44.000 0.00 0.00 0.00 3.51
6223 10163 1.293498 GCCTGACGAGGTGACATGT 59.707 57.895 0.00 0.00 42.15 3.21
6224 10164 0.320771 GCCTGACGAGGTGACATGTT 60.321 55.000 0.00 0.00 42.15 2.71
6251 10193 8.078060 TCAGATTCATAAACATCTCTACACCA 57.922 34.615 0.00 0.00 0.00 4.17
6264 10206 6.235231 TCTCTACACCAGTTCTGTTCTTTT 57.765 37.500 0.00 0.00 0.00 2.27
6290 10360 4.219288 AGAAAAGCCAAGTTCATGGATCAC 59.781 41.667 0.00 0.00 43.54 3.06
6306 10376 6.399639 TGGATCACGCTTCATACACTAATA 57.600 37.500 0.00 0.00 0.00 0.98
6307 10377 6.213677 TGGATCACGCTTCATACACTAATAC 58.786 40.000 0.00 0.00 0.00 1.89
6308 10378 6.040504 TGGATCACGCTTCATACACTAATACT 59.959 38.462 0.00 0.00 0.00 2.12
6309 10379 6.363626 GGATCACGCTTCATACACTAATACTG 59.636 42.308 0.00 0.00 0.00 2.74
6310 10380 6.203808 TCACGCTTCATACACTAATACTGT 57.796 37.500 0.00 0.00 0.00 3.55
6311 10381 7.324354 TCACGCTTCATACACTAATACTGTA 57.676 36.000 0.00 0.00 0.00 2.74
6365 10435 5.829924 TGATCATCCTCATTCCCTTTTTAGC 59.170 40.000 0.00 0.00 0.00 3.09
6379 10449 0.953727 TTTAGCGGGCATGCATCATC 59.046 50.000 21.36 0.49 37.31 2.92
6381 10451 4.034258 GCGGGCATGCATCATCCG 62.034 66.667 23.01 23.01 43.13 4.18
6382 10452 2.281002 CGGGCATGCATCATCCGA 60.281 61.111 22.95 0.00 42.94 4.55
6388 10458 3.947196 GGGCATGCATCATCCGAATTATA 59.053 43.478 21.36 0.00 0.00 0.98
6389 10459 4.398988 GGGCATGCATCATCCGAATTATAA 59.601 41.667 21.36 0.00 0.00 0.98
6390 10460 5.335127 GGCATGCATCATCCGAATTATAAC 58.665 41.667 21.36 0.00 0.00 1.89
6391 10461 5.124457 GGCATGCATCATCCGAATTATAACT 59.876 40.000 21.36 0.00 0.00 2.24
6393 10463 6.348786 GCATGCATCATCCGAATTATAACTGT 60.349 38.462 14.21 0.00 0.00 3.55
6394 10464 6.544038 TGCATCATCCGAATTATAACTGTG 57.456 37.500 0.00 0.00 0.00 3.66
6395 10465 5.049474 TGCATCATCCGAATTATAACTGTGC 60.049 40.000 0.00 0.00 0.00 4.57
6396 10466 5.617751 GCATCATCCGAATTATAACTGTGCC 60.618 44.000 0.00 0.00 0.00 5.01
6398 10468 5.056480 TCATCCGAATTATAACTGTGCCTG 58.944 41.667 0.00 0.00 0.00 4.85
6400 10470 4.839121 TCCGAATTATAACTGTGCCTGTT 58.161 39.130 0.00 3.69 0.00 3.16
6402 10472 6.588204 TCCGAATTATAACTGTGCCTGTTAT 58.412 36.000 16.05 16.05 40.08 1.89
6403 10473 7.728148 TCCGAATTATAACTGTGCCTGTTATA 58.272 34.615 14.72 14.72 38.65 0.98
6405 10475 8.280497 CCGAATTATAACTGTGCCTGTTATAAC 58.720 37.037 23.53 8.75 44.80 1.89
6406 10476 8.002107 CGAATTATAACTGTGCCTGTTATAACG 58.998 37.037 23.53 20.87 44.80 3.18
6407 10477 8.726870 AATTATAACTGTGCCTGTTATAACGT 57.273 30.769 23.53 17.33 44.80 3.99
6408 10478 7.528481 TTATAACTGTGCCTGTTATAACGTG 57.472 36.000 20.55 5.60 41.33 4.49
6409 10479 3.396260 ACTGTGCCTGTTATAACGTGT 57.604 42.857 10.92 0.01 0.00 4.49
6411 10481 1.801771 TGTGCCTGTTATAACGTGTGC 59.198 47.619 10.92 10.37 0.00 4.57
6413 10483 2.482721 GTGCCTGTTATAACGTGTGCTT 59.517 45.455 10.92 0.00 0.00 3.91
6414 10484 2.739913 TGCCTGTTATAACGTGTGCTTC 59.260 45.455 10.92 0.00 0.00 3.86
6415 10485 3.000727 GCCTGTTATAACGTGTGCTTCT 58.999 45.455 10.92 0.00 0.00 2.85
6416 10486 3.181520 GCCTGTTATAACGTGTGCTTCTG 60.182 47.826 10.92 0.00 0.00 3.02
6418 10488 3.994392 CTGTTATAACGTGTGCTTCTGGT 59.006 43.478 10.92 0.00 0.00 4.00
6419 10489 5.136816 TGTTATAACGTGTGCTTCTGGTA 57.863 39.130 10.92 0.00 0.00 3.25
6421 10491 6.865411 TGTTATAACGTGTGCTTCTGGTATA 58.135 36.000 10.92 0.00 0.00 1.47
6423 10493 7.276218 TGTTATAACGTGTGCTTCTGGTATAAC 59.724 37.037 10.92 14.86 0.00 1.89
6424 10494 3.955650 ACGTGTGCTTCTGGTATAACT 57.044 42.857 0.00 0.00 0.00 2.24
6425 10495 5.395682 AACGTGTGCTTCTGGTATAACTA 57.604 39.130 0.00 0.00 0.00 2.24
6426 10496 5.593679 ACGTGTGCTTCTGGTATAACTAT 57.406 39.130 0.00 0.00 0.00 2.12
6428 10498 5.126545 ACGTGTGCTTCTGGTATAACTATGA 59.873 40.000 0.00 0.00 0.00 2.15
6429 10499 6.183360 ACGTGTGCTTCTGGTATAACTATGAT 60.183 38.462 0.00 0.00 0.00 2.45
6430 10500 6.363626 CGTGTGCTTCTGGTATAACTATGATC 59.636 42.308 0.00 0.00 0.00 2.92
6431 10501 6.647067 GTGTGCTTCTGGTATAACTATGATCC 59.353 42.308 0.00 0.00 0.00 3.36
6432 10502 6.554982 TGTGCTTCTGGTATAACTATGATCCT 59.445 38.462 0.00 0.00 0.00 3.24
6433 10503 6.870965 GTGCTTCTGGTATAACTATGATCCTG 59.129 42.308 0.00 0.00 0.00 3.86
6434 10504 6.014242 TGCTTCTGGTATAACTATGATCCTGG 60.014 42.308 0.00 0.00 0.00 4.45
6435 10505 6.211584 GCTTCTGGTATAACTATGATCCTGGA 59.788 42.308 0.00 0.00 0.00 3.86
6436 10506 7.256332 GCTTCTGGTATAACTATGATCCTGGAA 60.256 40.741 0.00 0.00 0.00 3.53
6437 10507 7.782897 TCTGGTATAACTATGATCCTGGAAG 57.217 40.000 0.00 0.00 0.00 3.46
6438 10508 7.306013 TCTGGTATAACTATGATCCTGGAAGT 58.694 38.462 0.00 0.00 0.00 3.01
6439 10509 7.789831 TCTGGTATAACTATGATCCTGGAAGTT 59.210 37.037 14.16 14.16 34.86 2.66
6440 10510 7.735917 TGGTATAACTATGATCCTGGAAGTTG 58.264 38.462 17.65 4.62 32.85 3.16
6441 10511 7.347222 TGGTATAACTATGATCCTGGAAGTTGT 59.653 37.037 17.65 14.46 32.85 3.32
6442 10512 7.657761 GGTATAACTATGATCCTGGAAGTTGTG 59.342 40.741 17.65 3.86 32.85 3.33
6443 10513 3.878778 ACTATGATCCTGGAAGTTGTGC 58.121 45.455 0.00 0.00 0.00 4.57
6444 10514 2.134789 ATGATCCTGGAAGTTGTGCC 57.865 50.000 0.00 0.00 0.00 5.01
6445 10515 0.770499 TGATCCTGGAAGTTGTGCCA 59.230 50.000 0.00 0.00 0.00 4.92
6452 10522 0.606673 GGAAGTTGTGCCAGACTCCC 60.607 60.000 0.00 0.00 0.00 4.30
6455 10525 0.550914 AGTTGTGCCAGACTCCCAAA 59.449 50.000 0.00 0.00 0.00 3.28
6479 10549 1.511850 TTTGACATCAGGACACAGCG 58.488 50.000 0.00 0.00 0.00 5.18
6482 10552 1.069978 TGACATCAGGACACAGCGAAA 59.930 47.619 0.00 0.00 0.00 3.46
6485 10555 1.728971 CATCAGGACACAGCGAAACTC 59.271 52.381 0.00 0.00 0.00 3.01
6578 10648 9.450807 GCCTTGTATGCATAATTAACTTTACAG 57.549 33.333 8.28 0.00 0.00 2.74
6708 10779 6.013379 CCAGATAGGATAGTGGTACAGTCAT 58.987 44.000 0.00 0.00 40.28 3.06
6711 10782 4.265856 AGGATAGTGGTACAGTCATGGA 57.734 45.455 0.00 0.00 43.36 3.41
6825 10904 0.105224 TTGTCAAGGCCGTCGAAGAA 59.895 50.000 0.00 0.00 39.69 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.180271 GTGTGTCCTAATGGAACCGAATAA 58.820 41.667 0.00 0.00 45.18 1.40
27 28 1.337447 ACGTGTGTCCTAATGGAACCG 60.337 52.381 0.00 0.00 45.18 4.44
28 29 2.467566 ACGTGTGTCCTAATGGAACC 57.532 50.000 0.00 0.00 45.18 3.62
30 31 3.810941 GTCAAACGTGTGTCCTAATGGAA 59.189 43.478 5.45 0.00 45.18 3.53
32 33 2.482721 GGTCAAACGTGTGTCCTAATGG 59.517 50.000 14.01 0.00 0.00 3.16
43 44 5.479716 AGAGTAACTTTTGGTCAAACGTG 57.520 39.130 6.38 0.00 33.81 4.49
123 128 9.855021 ATAAGTTGTTGATACAAAAGCATAACC 57.145 29.630 0.00 0.00 45.33 2.85
174 185 6.642540 CCAAAAGTTTGAAATGCTCCTTCTAC 59.357 38.462 5.34 0.00 40.55 2.59
265 337 3.120199 CCCTCTGTTTTATGTGCAAGTCG 60.120 47.826 0.00 0.00 0.00 4.18
322 3703 2.124277 AGAAGATGGTTTTACCCCGC 57.876 50.000 0.00 0.00 37.50 6.13
323 3704 5.462530 AAAAAGAAGATGGTTTTACCCCG 57.537 39.130 0.00 0.00 37.50 5.73
336 3720 7.180946 TGAGGATGATGAGAGGTAAAAAGAAGA 59.819 37.037 0.00 0.00 0.00 2.87
401 3786 8.099537 TCCAAATGTATGTAAAATTTGCATGGT 58.900 29.630 17.44 2.95 39.09 3.55
596 3981 2.437716 GCCTCGAATTCCGGCCAA 60.438 61.111 18.23 0.00 37.86 4.52
699 4084 2.046292 GAGGAGGAAATGAGAGGAGGG 58.954 57.143 0.00 0.00 0.00 4.30
897 4286 2.305927 AGCAAGGGATTCTTTCTCCGAA 59.694 45.455 0.00 0.00 32.41 4.30
910 4300 1.630878 GGAAGAGGAAGAAGCAAGGGA 59.369 52.381 0.00 0.00 0.00 4.20
1250 4650 3.120546 CGGCGCCATGATCAATTAAGTAG 60.121 47.826 28.98 0.00 0.00 2.57
1462 4865 2.701780 CCCTCCCGAGACACACGAG 61.702 68.421 0.00 0.00 0.00 4.18
1694 5108 7.619965 ACTTTGTTCAAATTATTACCCCATGG 58.380 34.615 4.14 4.14 37.80 3.66
1721 5135 7.974675 TGTATTACACTCCTAACACGTAGTAC 58.025 38.462 0.00 0.00 41.61 2.73
1731 5153 7.446769 ACACACACAATGTATTACACTCCTAA 58.553 34.615 0.00 0.00 40.64 2.69
1826 5255 1.278637 GTTCTGGTCCACAAACGCG 59.721 57.895 3.53 3.53 0.00 6.01
1867 5296 1.153289 CCATCAAGAGGGACCGCTG 60.153 63.158 0.00 0.00 33.27 5.18
1926 5355 2.517959 CTTTGGAAGAATCACCCTGCA 58.482 47.619 0.00 0.00 0.00 4.41
1956 5389 9.865321 GCCATGATGCATTCTATATGTTTATTT 57.135 29.630 0.00 0.00 0.00 1.40
1957 5390 9.027202 TGCCATGATGCATTCTATATGTTTATT 57.973 29.630 0.00 0.00 36.04 1.40
1958 5391 8.584063 TGCCATGATGCATTCTATATGTTTAT 57.416 30.769 0.00 0.00 36.04 1.40
1959 5392 7.999450 TGCCATGATGCATTCTATATGTTTA 57.001 32.000 0.00 0.00 36.04 2.01
2034 5732 9.339492 CAAAGCTCATTTCTTATTCTTGTCTTC 57.661 33.333 0.00 0.00 0.00 2.87
2154 5983 6.532826 AGCAAGATCTTCTATTCTGAATCCC 58.467 40.000 4.57 0.00 0.00 3.85
2201 6030 2.297597 AGGACGACTGACTGAGAAAAGG 59.702 50.000 0.00 0.00 0.00 3.11
2217 6046 3.363627 AGGAGGGTAAGTTTCTAGGACG 58.636 50.000 0.00 0.00 0.00 4.79
2262 6091 0.590195 AGAAGCAGAAAAGCACGCAG 59.410 50.000 0.00 0.00 36.85 5.18
2263 6092 0.308684 CAGAAGCAGAAAAGCACGCA 59.691 50.000 0.00 0.00 36.85 5.24
2264 6093 0.588252 TCAGAAGCAGAAAAGCACGC 59.412 50.000 0.00 0.00 36.85 5.34
2265 6094 2.545526 TCTTCAGAAGCAGAAAAGCACG 59.454 45.455 5.15 0.00 36.85 5.34
2266 6095 4.762956 ATCTTCAGAAGCAGAAAAGCAC 57.237 40.909 5.15 0.00 36.85 4.40
2267 6096 5.779529 AAATCTTCAGAAGCAGAAAAGCA 57.220 34.783 5.15 0.00 36.85 3.91
2295 6125 7.493971 GTGCTACTCACTGAAATCTACATGAAT 59.506 37.037 0.00 0.00 42.38 2.57
2386 6220 6.012658 TGTGTATTTGGCTTCAGATTGAAC 57.987 37.500 0.00 0.00 32.21 3.18
2730 6564 4.772100 TCCGCTCATCAATGTCTATATCCA 59.228 41.667 0.00 0.00 0.00 3.41
2814 6648 9.088512 GAGTATGAAAAGTTCAATATCGAGTGT 57.911 33.333 0.00 0.00 43.95 3.55
2930 6765 7.703197 CCATGTGTACACGTACATAATACTGAA 59.297 37.037 20.05 0.00 46.36 3.02
2942 6777 6.927416 AGATCTTAAACCATGTGTACACGTA 58.073 36.000 20.05 4.35 0.00 3.57
2999 6834 4.807834 GGAACAAGGTATCTAACTAACGCC 59.192 45.833 0.00 0.00 0.00 5.68
3001 6836 6.628185 ACAGGAACAAGGTATCTAACTAACG 58.372 40.000 0.00 0.00 0.00 3.18
3003 6838 9.856162 AAAAACAGGAACAAGGTATCTAACTAA 57.144 29.630 0.00 0.00 0.00 2.24
3004 6839 9.280174 CAAAAACAGGAACAAGGTATCTAACTA 57.720 33.333 0.00 0.00 0.00 2.24
3029 6864 6.133356 ACTCAAACAAAAGGATAGGAAACCA 58.867 36.000 0.00 0.00 0.00 3.67
3030 6865 6.490381 AGACTCAAACAAAAGGATAGGAAACC 59.510 38.462 0.00 0.00 0.00 3.27
3102 6937 5.188751 ACATAGGACCTTTTTCCTCTCTCTG 59.811 44.000 0.00 0.00 42.98 3.35
3103 6938 5.188751 CACATAGGACCTTTTTCCTCTCTCT 59.811 44.000 0.00 0.00 42.98 3.10
3232 7068 5.424121 AAGTATTTGTCAGCAACTGTGTC 57.576 39.130 0.00 0.00 33.82 3.67
3238 7074 4.403453 CCGCTAAAGTATTTGTCAGCAAC 58.597 43.478 0.00 0.00 39.63 4.17
3246 7082 6.020971 AGGAAAAACCCGCTAAAGTATTTG 57.979 37.500 0.00 0.00 38.03 2.32
3254 7090 8.584063 AAATAGAATTAGGAAAAACCCGCTAA 57.416 30.769 0.00 0.00 40.05 3.09
3256 7092 8.630037 CATAAATAGAATTAGGAAAAACCCGCT 58.370 33.333 0.00 0.00 40.05 5.52
3381 7224 6.466812 TGATTTGTCACTAGAATCAGAAGCA 58.533 36.000 0.00 0.00 35.51 3.91
3417 7260 8.472413 TGTAGTGTTAACTGTACCTTATGATCC 58.528 37.037 7.22 0.00 37.19 3.36
3462 7305 8.408043 TTGTCTTTAAACAGTGGATCATCATT 57.592 30.769 0.00 0.00 0.00 2.57
3474 7317 7.465989 TGGTAACGAAACTTGTCTTTAAACAG 58.534 34.615 0.00 0.00 42.51 3.16
3485 7328 4.331717 AGTGACTGTTGGTAACGAAACTTG 59.668 41.667 0.00 0.00 42.51 3.16
3518 7363 2.050442 GCTTCACGGTTTTGGGCG 60.050 61.111 0.00 0.00 0.00 6.13
3570 7415 8.334263 TGAGTGCACATTTCAAGAATATACAA 57.666 30.769 21.04 0.00 0.00 2.41
3582 7427 6.763135 TGGAATCTAGTATGAGTGCACATTTC 59.237 38.462 21.04 8.71 28.27 2.17
3589 7434 6.763135 TCACAAATGGAATCTAGTATGAGTGC 59.237 38.462 0.00 0.00 0.00 4.40
3598 7443 5.277202 CGAGCACATCACAAATGGAATCTAG 60.277 44.000 0.00 0.00 0.00 2.43
3599 7444 4.571984 CGAGCACATCACAAATGGAATCTA 59.428 41.667 0.00 0.00 0.00 1.98
3622 7467 0.036010 ACCATGCTACCACAGAGTGC 60.036 55.000 0.00 0.00 31.34 4.40
3625 7470 3.895232 AACTACCATGCTACCACAGAG 57.105 47.619 0.00 0.00 0.00 3.35
3626 7471 3.326588 ACAAACTACCATGCTACCACAGA 59.673 43.478 0.00 0.00 0.00 3.41
3654 7499 5.008019 GGGTGAAATGATACAGCATACACTG 59.992 44.000 13.32 0.00 43.59 3.66
3663 7508 7.396540 AAAGCTTTAGGGTGAAATGATACAG 57.603 36.000 10.72 0.00 0.00 2.74
3664 7509 8.325787 TCTAAAGCTTTAGGGTGAAATGATACA 58.674 33.333 34.79 15.50 40.35 2.29
3676 7521 6.757478 GCTACAGTAGTTCTAAAGCTTTAGGG 59.243 42.308 34.79 19.17 40.35 3.53
3690 7535 4.396166 GCACAAATCCATGCTACAGTAGTT 59.604 41.667 9.42 0.00 38.84 2.24
3729 7574 3.874392 AGCAAAATCATGTGTTAGGCC 57.126 42.857 0.00 0.00 0.00 5.19
3798 7643 4.652679 AGAAGAAAACGGGGAAATAGGT 57.347 40.909 0.00 0.00 0.00 3.08
3801 7646 8.269317 ACATACATAGAAGAAAACGGGGAAATA 58.731 33.333 0.00 0.00 0.00 1.40
3802 7647 7.116736 ACATACATAGAAGAAAACGGGGAAAT 58.883 34.615 0.00 0.00 0.00 2.17
3803 7648 6.478129 ACATACATAGAAGAAAACGGGGAAA 58.522 36.000 0.00 0.00 0.00 3.13
3804 7649 6.057321 ACATACATAGAAGAAAACGGGGAA 57.943 37.500 0.00 0.00 0.00 3.97
3805 7650 5.687166 ACATACATAGAAGAAAACGGGGA 57.313 39.130 0.00 0.00 0.00 4.81
3806 7651 5.296035 GGAACATACATAGAAGAAAACGGGG 59.704 44.000 0.00 0.00 0.00 5.73
3807 7652 5.878116 TGGAACATACATAGAAGAAAACGGG 59.122 40.000 0.00 0.00 0.00 5.28
3808 7653 6.594159 AGTGGAACATACATAGAAGAAAACGG 59.406 38.462 0.00 0.00 44.52 4.44
3809 7654 7.330946 TCAGTGGAACATACATAGAAGAAAACG 59.669 37.037 0.00 0.00 44.52 3.60
3810 7655 8.547967 TCAGTGGAACATACATAGAAGAAAAC 57.452 34.615 0.00 0.00 44.52 2.43
3811 7656 7.334421 GCTCAGTGGAACATACATAGAAGAAAA 59.666 37.037 0.00 0.00 44.52 2.29
3812 7657 6.818644 GCTCAGTGGAACATACATAGAAGAAA 59.181 38.462 0.00 0.00 44.52 2.52
3813 7658 6.341316 GCTCAGTGGAACATACATAGAAGAA 58.659 40.000 0.00 0.00 44.52 2.52
3814 7659 5.163405 GGCTCAGTGGAACATACATAGAAGA 60.163 44.000 0.00 0.00 44.52 2.87
3815 7660 5.053145 GGCTCAGTGGAACATACATAGAAG 58.947 45.833 0.00 0.00 44.52 2.85
3816 7661 4.469586 TGGCTCAGTGGAACATACATAGAA 59.530 41.667 0.00 0.00 44.52 2.10
3817 7662 4.030216 TGGCTCAGTGGAACATACATAGA 58.970 43.478 0.00 0.00 44.52 1.98
3818 7663 4.122776 GTGGCTCAGTGGAACATACATAG 58.877 47.826 0.00 0.00 44.52 2.23
3819 7664 3.774766 AGTGGCTCAGTGGAACATACATA 59.225 43.478 0.00 0.00 44.52 2.29
3820 7665 2.573462 AGTGGCTCAGTGGAACATACAT 59.427 45.455 0.00 0.00 44.52 2.29
3821 7666 1.977854 AGTGGCTCAGTGGAACATACA 59.022 47.619 0.00 0.00 44.52 2.29
3822 7667 2.744202 CAAGTGGCTCAGTGGAACATAC 59.256 50.000 0.00 0.00 44.52 2.39
3823 7668 2.290260 CCAAGTGGCTCAGTGGAACATA 60.290 50.000 3.89 0.00 44.52 2.29
3824 7669 1.546323 CCAAGTGGCTCAGTGGAACAT 60.546 52.381 3.89 0.00 44.52 2.71
3825 7670 0.179020 CCAAGTGGCTCAGTGGAACA 60.179 55.000 3.89 0.00 41.43 3.18
3826 7671 0.890996 CCCAAGTGGCTCAGTGGAAC 60.891 60.000 9.98 0.00 0.00 3.62
3827 7672 1.059584 TCCCAAGTGGCTCAGTGGAA 61.060 55.000 9.98 0.00 0.00 3.53
3828 7673 1.461268 TCCCAAGTGGCTCAGTGGA 60.461 57.895 9.98 0.12 0.00 4.02
3829 7674 1.002868 CTCCCAAGTGGCTCAGTGG 60.003 63.158 0.00 3.13 0.00 4.00
3830 7675 0.397941 TTCTCCCAAGTGGCTCAGTG 59.602 55.000 0.00 0.00 0.00 3.66
3831 7676 0.398318 GTTCTCCCAAGTGGCTCAGT 59.602 55.000 0.00 0.00 0.00 3.41
3832 7677 0.689623 AGTTCTCCCAAGTGGCTCAG 59.310 55.000 0.00 0.00 0.00 3.35
3833 7678 2.024176 TAGTTCTCCCAAGTGGCTCA 57.976 50.000 0.00 0.00 0.00 4.26
3834 7679 3.636153 AATAGTTCTCCCAAGTGGCTC 57.364 47.619 0.00 0.00 0.00 4.70
3835 7680 3.690460 CAAATAGTTCTCCCAAGTGGCT 58.310 45.455 0.00 0.00 0.00 4.75
3836 7681 2.164422 GCAAATAGTTCTCCCAAGTGGC 59.836 50.000 0.00 0.00 0.00 5.01
3837 7682 3.420893 TGCAAATAGTTCTCCCAAGTGG 58.579 45.455 0.00 0.00 0.00 4.00
3838 7683 5.649782 AATGCAAATAGTTCTCCCAAGTG 57.350 39.130 0.00 0.00 0.00 3.16
3839 7684 7.961326 AATAATGCAAATAGTTCTCCCAAGT 57.039 32.000 0.00 0.00 0.00 3.16
3840 7685 8.469200 TGAAATAATGCAAATAGTTCTCCCAAG 58.531 33.333 18.04 0.00 30.80 3.61
3841 7686 8.250332 GTGAAATAATGCAAATAGTTCTCCCAA 58.750 33.333 18.04 2.24 30.80 4.12
3842 7687 7.147915 GGTGAAATAATGCAAATAGTTCTCCCA 60.148 37.037 21.38 5.89 36.09 4.37
3843 7688 7.147915 TGGTGAAATAATGCAAATAGTTCTCCC 60.148 37.037 25.11 20.67 38.90 4.30
3844 7689 7.771183 TGGTGAAATAATGCAAATAGTTCTCC 58.229 34.615 23.29 23.29 39.54 3.71
3845 7690 9.807649 AATGGTGAAATAATGCAAATAGTTCTC 57.192 29.630 18.04 15.32 30.80 2.87
3848 7693 9.165035 CCAAATGGTGAAATAATGCAAATAGTT 57.835 29.630 0.00 0.00 0.00 2.24
3849 7694 7.280652 GCCAAATGGTGAAATAATGCAAATAGT 59.719 33.333 0.71 0.00 37.57 2.12
3850 7695 7.496591 AGCCAAATGGTGAAATAATGCAAATAG 59.503 33.333 0.71 0.00 37.57 1.73
3851 7696 7.337167 AGCCAAATGGTGAAATAATGCAAATA 58.663 30.769 0.71 0.00 37.57 1.40
3852 7697 6.181908 AGCCAAATGGTGAAATAATGCAAAT 58.818 32.000 0.71 0.00 37.57 2.32
3853 7698 5.558818 AGCCAAATGGTGAAATAATGCAAA 58.441 33.333 0.71 0.00 37.57 3.68
3854 7699 5.163281 AGCCAAATGGTGAAATAATGCAA 57.837 34.783 0.71 0.00 37.57 4.08
3855 7700 4.822685 AGCCAAATGGTGAAATAATGCA 57.177 36.364 0.71 0.00 37.57 3.96
3856 7701 5.412286 ACAAAGCCAAATGGTGAAATAATGC 59.588 36.000 0.71 0.00 37.57 3.56
3857 7702 6.649973 TGACAAAGCCAAATGGTGAAATAATG 59.350 34.615 0.71 0.00 37.57 1.90
3858 7703 6.767456 TGACAAAGCCAAATGGTGAAATAAT 58.233 32.000 0.71 0.00 37.57 1.28
3859 7704 6.166984 TGACAAAGCCAAATGGTGAAATAA 57.833 33.333 0.71 0.00 37.57 1.40
3910 7755 7.600375 TGCTCTAGTTGAGTAAGTTTCAATCTG 59.400 37.037 3.52 0.00 44.41 2.90
4111 7964 5.049543 CGAACGGAGGGAGTAATACTTAGAG 60.050 48.000 0.00 0.00 0.00 2.43
4115 7968 2.692041 CCGAACGGAGGGAGTAATACTT 59.308 50.000 7.53 0.00 37.50 2.24
4116 7969 2.092212 TCCGAACGGAGGGAGTAATACT 60.092 50.000 12.04 0.00 39.76 2.12
4117 7970 2.301346 TCCGAACGGAGGGAGTAATAC 58.699 52.381 12.04 0.00 39.76 1.89
4118 7971 2.734755 TCCGAACGGAGGGAGTAATA 57.265 50.000 12.04 0.00 39.76 0.98
4119 7972 1.856629 TTCCGAACGGAGGGAGTAAT 58.143 50.000 15.34 0.00 46.06 1.89
4121 7974 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
4122 7975 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
4123 7976 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4124 7977 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4125 7978 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4126 7979 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4127 7980 3.367025 GTGACAAGTAATTCCGAACGGAG 59.633 47.826 15.34 5.60 46.06 4.63
4128 7981 3.243805 TGTGACAAGTAATTCCGAACGGA 60.244 43.478 12.04 12.04 43.52 4.69
4129 7982 3.061322 TGTGACAAGTAATTCCGAACGG 58.939 45.455 6.94 6.94 0.00 4.44
4130 7983 4.718858 TTGTGACAAGTAATTCCGAACG 57.281 40.909 0.00 0.00 0.00 3.95
4131 7984 7.924103 ATTTTTGTGACAAGTAATTCCGAAC 57.076 32.000 0.00 0.00 0.00 3.95
4132 7985 9.058174 TCTATTTTTGTGACAAGTAATTCCGAA 57.942 29.630 11.28 0.00 0.00 4.30
4133 7986 8.610248 TCTATTTTTGTGACAAGTAATTCCGA 57.390 30.769 11.28 5.76 0.00 4.55
4187 8040 9.553064 GTCCAAGAAATGAATGTATCTAGATGT 57.447 33.333 15.79 0.00 0.00 3.06
4188 8041 8.706936 CGTCCAAGAAATGAATGTATCTAGATG 58.293 37.037 15.79 0.00 0.00 2.90
4189 8042 8.642432 TCGTCCAAGAAATGAATGTATCTAGAT 58.358 33.333 10.73 10.73 0.00 1.98
4190 8043 8.007405 TCGTCCAAGAAATGAATGTATCTAGA 57.993 34.615 0.00 0.00 0.00 2.43
4191 8044 7.923344 ACTCGTCCAAGAAATGAATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
4192 8045 7.782049 ACTCGTCCAAGAAATGAATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
4193 8046 6.644347 ACTCGTCCAAGAAATGAATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
4194 8047 6.910536 ACTCGTCCAAGAAATGAATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
4195 8048 8.964476 ATTACTCGTCCAAGAAATGAATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
4196 8049 8.786826 AATTACTCGTCCAAGAAATGAATGTA 57.213 30.769 0.00 0.00 0.00 2.29
4197 8050 7.148239 GGAATTACTCGTCCAAGAAATGAATGT 60.148 37.037 0.00 0.00 33.79 2.71
4198 8051 7.189512 GGAATTACTCGTCCAAGAAATGAATG 58.810 38.462 0.00 0.00 33.79 2.67
4199 8052 6.037172 CGGAATTACTCGTCCAAGAAATGAAT 59.963 38.462 0.00 0.00 33.10 2.57
4200 8053 5.350365 CGGAATTACTCGTCCAAGAAATGAA 59.650 40.000 0.00 0.00 33.10 2.57
4201 8054 4.868171 CGGAATTACTCGTCCAAGAAATGA 59.132 41.667 0.00 0.00 33.10 2.57
4202 8055 4.868171 TCGGAATTACTCGTCCAAGAAATG 59.132 41.667 0.00 0.00 33.10 2.32
4203 8056 5.080969 TCGGAATTACTCGTCCAAGAAAT 57.919 39.130 0.00 0.00 33.10 2.17
4204 8057 4.524316 TCGGAATTACTCGTCCAAGAAA 57.476 40.909 0.00 0.00 33.10 2.52
4205 8058 4.240096 GTTCGGAATTACTCGTCCAAGAA 58.760 43.478 0.00 0.00 33.10 2.52
4206 8059 3.671433 CGTTCGGAATTACTCGTCCAAGA 60.671 47.826 0.00 0.00 33.10 3.02
4207 8060 2.597305 CGTTCGGAATTACTCGTCCAAG 59.403 50.000 0.00 0.00 33.10 3.61
4208 8061 2.598589 CGTTCGGAATTACTCGTCCAA 58.401 47.619 0.00 0.00 33.10 3.53
4209 8062 1.135315 CCGTTCGGAATTACTCGTCCA 60.135 52.381 5.19 0.00 33.10 4.02
4210 8063 1.133025 TCCGTTCGGAATTACTCGTCC 59.867 52.381 11.66 0.00 0.00 4.79
4211 8064 2.448219 CTCCGTTCGGAATTACTCGTC 58.552 52.381 14.79 0.00 33.41 4.20
4212 8065 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
4213 8066 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
4214 8067 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
4215 8068 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4216 8069 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4217 8070 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4218 8071 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
4219 8072 1.064166 TCTACTCCCTCCGTTCGGAAT 60.064 52.381 14.79 2.09 33.41 3.01
4220 8073 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30
4221 8074 0.549950 ATCTACTCCCTCCGTTCGGA 59.450 55.000 13.34 13.34 0.00 4.55
4222 8075 1.067212 CAATCTACTCCCTCCGTTCGG 59.933 57.143 4.74 4.74 0.00 4.30
4223 8076 1.067212 CCAATCTACTCCCTCCGTTCG 59.933 57.143 0.00 0.00 0.00 3.95
4224 8077 2.108970 ACCAATCTACTCCCTCCGTTC 58.891 52.381 0.00 0.00 0.00 3.95
4225 8078 2.249309 ACCAATCTACTCCCTCCGTT 57.751 50.000 0.00 0.00 0.00 4.44
4226 8079 3.117246 TGATACCAATCTACTCCCTCCGT 60.117 47.826 0.00 0.00 32.93 4.69
4227 8080 3.497332 TGATACCAATCTACTCCCTCCG 58.503 50.000 0.00 0.00 32.93 4.63
4228 8081 3.259625 GCTGATACCAATCTACTCCCTCC 59.740 52.174 0.00 0.00 32.93 4.30
4229 8082 3.898123 TGCTGATACCAATCTACTCCCTC 59.102 47.826 0.00 0.00 32.93 4.30
4230 8083 3.900601 CTGCTGATACCAATCTACTCCCT 59.099 47.826 0.00 0.00 32.93 4.20
4231 8084 3.643792 ACTGCTGATACCAATCTACTCCC 59.356 47.826 0.00 0.00 32.93 4.30
4232 8085 4.946478 ACTGCTGATACCAATCTACTCC 57.054 45.455 0.00 0.00 32.93 3.85
4233 8086 9.982651 TTTAATACTGCTGATACCAATCTACTC 57.017 33.333 0.00 0.00 32.93 2.59
4234 8087 9.765795 GTTTAATACTGCTGATACCAATCTACT 57.234 33.333 0.00 0.00 32.93 2.57
4235 8088 9.765795 AGTTTAATACTGCTGATACCAATCTAC 57.234 33.333 0.00 0.00 35.19 2.59
4389 8244 8.563123 AAGCCACCTAAACTAGAAATCTTTAC 57.437 34.615 0.00 0.00 0.00 2.01
4488 8397 2.433604 TGGCACAAAAATCAGGCTTCAA 59.566 40.909 0.00 0.00 31.92 2.69
4515 8424 7.283625 ACATTAACATAAAAGGCACTGACAA 57.716 32.000 0.00 0.00 40.86 3.18
4544 8453 2.584835 TGCCACAGCTCCTACAAAAT 57.415 45.000 0.00 0.00 40.80 1.82
4545 8454 2.584835 ATGCCACAGCTCCTACAAAA 57.415 45.000 0.00 0.00 40.80 2.44
4872 8784 0.770557 ACTCACTAAGTTGGGCCCCA 60.771 55.000 22.27 4.90 33.03 4.96
4873 8785 0.322546 CACTCACTAAGTTGGGCCCC 60.323 60.000 22.27 4.15 35.45 5.80
4897 8810 3.838565 TGACATTAAGGGCTGTGGAAAA 58.161 40.909 0.00 0.00 0.00 2.29
4903 8816 4.265073 GTCATCTTGACATTAAGGGCTGT 58.735 43.478 0.00 0.00 46.22 4.40
4954 8872 8.583296 GTCGGTATTATAGAACTACAGGGAAAT 58.417 37.037 0.00 0.00 0.00 2.17
4956 8874 7.062322 TGTCGGTATTATAGAACTACAGGGAA 58.938 38.462 0.00 0.00 0.00 3.97
4962 8880 9.962783 ACAGAAATGTCGGTATTATAGAACTAC 57.037 33.333 0.00 0.00 29.60 2.73
4965 8883 8.062448 GCAACAGAAATGTCGGTATTATAGAAC 58.938 37.037 0.00 0.00 31.34 3.01
4966 8884 7.766738 TGCAACAGAAATGTCGGTATTATAGAA 59.233 33.333 0.00 0.00 31.34 2.10
4967 8885 7.269316 TGCAACAGAAATGTCGGTATTATAGA 58.731 34.615 0.00 0.00 31.34 1.98
4968 8886 7.224753 ACTGCAACAGAAATGTCGGTATTATAG 59.775 37.037 0.78 0.00 35.18 1.31
4970 8888 5.880332 ACTGCAACAGAAATGTCGGTATTAT 59.120 36.000 0.78 0.00 35.18 1.28
5032 8950 3.282021 CAGGTTGCATATGCCAGTAAGT 58.718 45.455 24.54 0.48 41.18 2.24
5101 9019 1.502231 CAAGCGACTGTTGTAGTGCT 58.498 50.000 0.00 0.00 41.97 4.40
5259 9177 2.686915 GCAGAGGAAATAGCAACTGCAT 59.313 45.455 0.00 0.00 46.30 3.96
5266 9184 7.201732 GCAACTAATTAAGCAGAGGAAATAGCA 60.202 37.037 0.00 0.00 0.00 3.49
5270 9188 5.951747 TGGCAACTAATTAAGCAGAGGAAAT 59.048 36.000 6.56 0.00 37.61 2.17
5301 9219 1.145738 AGTCTGCCCAAAACACCTCAT 59.854 47.619 0.00 0.00 0.00 2.90
5337 9255 9.314133 AGGATCAGAGCATATTACTGTACAATA 57.686 33.333 0.00 0.00 33.93 1.90
5338 9256 8.200024 AGGATCAGAGCATATTACTGTACAAT 57.800 34.615 0.00 0.00 33.93 2.71
5339 9257 7.603180 AGGATCAGAGCATATTACTGTACAA 57.397 36.000 0.00 0.00 33.93 2.41
5341 9259 7.437748 ACAAGGATCAGAGCATATTACTGTAC 58.562 38.462 0.00 0.00 33.93 2.90
5342 9260 7.603180 ACAAGGATCAGAGCATATTACTGTA 57.397 36.000 0.00 0.00 33.93 2.74
5343 9261 6.491714 ACAAGGATCAGAGCATATTACTGT 57.508 37.500 0.00 0.00 33.93 3.55
5344 9262 7.798596 AAACAAGGATCAGAGCATATTACTG 57.201 36.000 0.00 0.00 0.00 2.74
5345 9263 7.284034 CCAAAACAAGGATCAGAGCATATTACT 59.716 37.037 0.00 0.00 0.00 2.24
5346 9264 7.283127 TCCAAAACAAGGATCAGAGCATATTAC 59.717 37.037 0.00 0.00 0.00 1.89
5347 9265 7.345691 TCCAAAACAAGGATCAGAGCATATTA 58.654 34.615 0.00 0.00 0.00 0.98
5348 9266 6.189859 TCCAAAACAAGGATCAGAGCATATT 58.810 36.000 0.00 0.00 0.00 1.28
5365 9283 9.213799 CTAGGCTCAGATTATATTCTCCAAAAC 57.786 37.037 0.00 0.00 0.00 2.43
5378 9296 2.398588 CCACACCCTAGGCTCAGATTA 58.601 52.381 2.05 0.00 0.00 1.75
5402 9324 0.529773 TGAGTGGTGAGAACACGCAC 60.530 55.000 0.00 0.00 46.77 5.34
5426 9348 0.678048 GGGCAATTCGAGCTGGACTT 60.678 55.000 0.00 0.00 0.00 3.01
5430 9352 0.967380 AAAGGGGCAATTCGAGCTGG 60.967 55.000 0.00 0.00 0.00 4.85
5467 9391 2.357034 GCGCGGTGAAGGAAGTCA 60.357 61.111 8.83 0.00 0.00 3.41
5468 9392 3.479269 CGCGCGGTGAAGGAAGTC 61.479 66.667 24.84 0.00 0.00 3.01
5479 9407 2.098298 CAGAAATGGAACGCGCGG 59.902 61.111 35.22 16.31 0.00 6.46
5480 9408 1.059657 CAACAGAAATGGAACGCGCG 61.060 55.000 30.96 30.96 0.00 6.86
5483 9411 2.095059 AGATGCAACAGAAATGGAACGC 60.095 45.455 0.00 0.00 0.00 4.84
5510 9438 9.532494 TCCTAAATTCATTCTCCAAGATGAAAA 57.468 29.630 3.26 0.00 36.72 2.29
5511 9439 9.182214 CTCCTAAATTCATTCTCCAAGATGAAA 57.818 33.333 3.26 0.00 36.72 2.69
5512 9440 7.284034 GCTCCTAAATTCATTCTCCAAGATGAA 59.716 37.037 1.76 1.76 37.42 2.57
5513 9441 6.769822 GCTCCTAAATTCATTCTCCAAGATGA 59.230 38.462 0.00 0.00 0.00 2.92
5514 9442 6.771749 AGCTCCTAAATTCATTCTCCAAGATG 59.228 38.462 0.00 0.00 0.00 2.90
5516 9444 6.319048 AGCTCCTAAATTCATTCTCCAAGA 57.681 37.500 0.00 0.00 0.00 3.02
5517 9445 6.039159 GGAAGCTCCTAAATTCATTCTCCAAG 59.961 42.308 0.00 0.00 32.53 3.61
5527 9457 5.921962 AACATTGGGAAGCTCCTAAATTC 57.078 39.130 5.38 0.00 40.48 2.17
5543 9473 8.873215 ACTTCTATTATCTGTCGGTAACATTG 57.127 34.615 0.00 0.00 37.23 2.82
5552 9482 7.265673 TCTTTTGGGACTTCTATTATCTGTCG 58.734 38.462 0.00 0.00 0.00 4.35
5555 9485 9.454859 ACTTTCTTTTGGGACTTCTATTATCTG 57.545 33.333 0.00 0.00 0.00 2.90
5566 9496 9.338622 CCGATATATTTACTTTCTTTTGGGACT 57.661 33.333 0.00 0.00 0.00 3.85
5567 9497 8.565416 CCCGATATATTTACTTTCTTTTGGGAC 58.435 37.037 0.00 0.00 0.00 4.46
5568 9498 7.229907 GCCCGATATATTTACTTTCTTTTGGGA 59.770 37.037 0.00 0.00 0.00 4.37
5569 9499 7.230712 AGCCCGATATATTTACTTTCTTTTGGG 59.769 37.037 0.00 0.00 0.00 4.12
5570 9500 8.166422 AGCCCGATATATTTACTTTCTTTTGG 57.834 34.615 0.00 0.00 0.00 3.28
5573 9503 9.403583 TGAAAGCCCGATATATTTACTTTCTTT 57.596 29.630 20.34 10.88 41.16 2.52
5574 9504 8.974060 TGAAAGCCCGATATATTTACTTTCTT 57.026 30.769 20.34 5.52 41.16 2.52
5575 9505 8.608844 CTGAAAGCCCGATATATTTACTTTCT 57.391 34.615 20.34 1.27 41.16 2.52
5612 9542 3.054948 TGATGATGCATCAGTTCAGGTGA 60.055 43.478 31.36 7.36 44.60 4.02
5633 9563 7.398904 TGTTTTCTTCCTATTCCCCCTTATTTG 59.601 37.037 0.00 0.00 0.00 2.32
5634 9564 7.483881 TGTTTTCTTCCTATTCCCCCTTATTT 58.516 34.615 0.00 0.00 0.00 1.40
5675 9606 9.295825 AGTTCATCACCAGTTGAATACAAATTA 57.704 29.630 0.00 0.00 37.92 1.40
5706 9637 4.162131 TCAGCCTGCAGATAAGACATTGTA 59.838 41.667 17.39 0.00 0.00 2.41
5736 9667 0.884704 GCTGAAGGGTTTGCAGACGA 60.885 55.000 0.70 0.00 0.00 4.20
5742 9673 0.108945 GCATCTGCTGAAGGGTTTGC 60.109 55.000 0.00 0.00 38.21 3.68
5784 9715 0.740164 CAAGCAGAGCTCGTGCAGAT 60.740 55.000 28.21 17.02 43.82 2.90
5901 9832 9.935241 CACTCAAGATACAGCACCTAATATTAT 57.065 33.333 0.00 0.00 0.00 1.28
5902 9833 8.924303 ACACTCAAGATACAGCACCTAATATTA 58.076 33.333 0.00 0.00 0.00 0.98
5913 9844 5.517054 GCTAGTACAACACTCAAGATACAGC 59.483 44.000 0.00 0.00 38.80 4.40
5917 9848 5.394224 GCTGGCTAGTACAACACTCAAGATA 60.394 44.000 0.00 0.00 38.80 1.98
5931 9862 0.864659 TCCTATGGGGCTGGCTAGTA 59.135 55.000 0.00 0.00 34.39 1.82
5933 9864 1.366319 ATTCCTATGGGGCTGGCTAG 58.634 55.000 0.00 0.00 34.39 3.42
5983 9914 3.120792 GCTCGCCGATACAAGAACATTA 58.879 45.455 0.00 0.00 0.00 1.90
5997 9928 1.699656 CTGATCCAAACTGCTCGCCG 61.700 60.000 0.00 0.00 0.00 6.46
6004 9935 5.066117 CCTGACATGATTCTGATCCAAACTG 59.934 44.000 0.00 0.00 0.00 3.16
6031 9962 4.454161 TCCACTGAACATTCACCGTAAATG 59.546 41.667 0.00 0.00 39.50 2.32
6032 9963 4.647611 TCCACTGAACATTCACCGTAAAT 58.352 39.130 0.00 0.00 32.90 1.40
6040 9971 4.096833 GCAGCAATATCCACTGAACATTCA 59.903 41.667 4.29 0.00 33.10 2.57
6041 9972 4.498682 GGCAGCAATATCCACTGAACATTC 60.499 45.833 0.00 0.00 33.10 2.67
6079 10010 8.161699 ACGAACTTGTTCAATAGTTGGTAATT 57.838 30.769 13.05 0.00 40.16 1.40
6084 10015 5.178623 TGCTACGAACTTGTTCAATAGTTGG 59.821 40.000 13.05 0.00 34.88 3.77
6092 10023 6.125327 TCAAAAATGCTACGAACTTGTTCA 57.875 33.333 13.05 0.00 0.00 3.18
6106 10037 4.761227 ACATCCCCATGTTTTCAAAAATGC 59.239 37.500 0.00 0.00 40.66 3.56
6131 10063 9.638176 AGGATCTCAAATTATTCTGCAAGTATT 57.362 29.630 0.00 0.00 33.76 1.89
6147 10079 7.799081 AGAACATCACATCATAGGATCTCAAA 58.201 34.615 0.00 0.00 0.00 2.69
6156 10088 5.645067 ACACCACAAGAACATCACATCATAG 59.355 40.000 0.00 0.00 0.00 2.23
6170 10102 5.601583 TTAGGCGATTATACACCACAAGA 57.398 39.130 0.00 0.00 0.00 3.02
6198 10138 1.379443 ACCTCGTCAGGCGGTATGA 60.379 57.895 0.00 0.00 45.05 2.15
6204 10144 1.807165 CATGTCACCTCGTCAGGCG 60.807 63.158 0.00 0.00 45.05 5.52
6211 10151 4.452114 TGAATCTGAAAACATGTCACCTCG 59.548 41.667 0.00 0.00 0.00 4.63
6224 10164 9.383519 GGTGTAGAGATGTTTATGAATCTGAAA 57.616 33.333 0.00 0.00 33.26 2.69
6245 10187 6.411376 TCTTCAAAAGAACAGAACTGGTGTA 58.589 36.000 6.76 0.00 33.83 2.90
6264 10206 4.214310 TCCATGAACTTGGCTTTTCTTCA 58.786 39.130 0.00 0.00 36.66 3.02
6272 10214 1.742761 CGTGATCCATGAACTTGGCT 58.257 50.000 0.00 0.00 36.66 4.75
6327 10397 6.016860 TGAGGATGATCACACTTCTTTTTGTG 60.017 38.462 0.00 0.00 43.82 3.33
6328 10398 6.064060 TGAGGATGATCACACTTCTTTTTGT 58.936 36.000 0.00 0.00 0.00 2.83
6329 10399 6.564709 TGAGGATGATCACACTTCTTTTTG 57.435 37.500 0.00 0.00 0.00 2.44
6346 10416 3.555966 CCGCTAAAAAGGGAATGAGGAT 58.444 45.455 0.00 0.00 0.00 3.24
6365 10435 1.239296 ATTCGGATGATGCATGCCCG 61.239 55.000 21.80 21.80 41.36 6.13
6379 10449 6.861065 ATAACAGGCACAGTTATAATTCGG 57.139 37.500 7.83 0.00 46.59 4.30
6388 10458 3.496884 CACACGTTATAACAGGCACAGTT 59.503 43.478 15.67 0.00 41.93 3.16
6389 10459 3.064207 CACACGTTATAACAGGCACAGT 58.936 45.455 15.67 0.81 0.00 3.55
6390 10460 2.159707 GCACACGTTATAACAGGCACAG 60.160 50.000 15.67 0.21 0.00 3.66
6391 10461 1.801771 GCACACGTTATAACAGGCACA 59.198 47.619 15.67 0.00 0.00 4.57
6393 10463 2.465860 AGCACACGTTATAACAGGCA 57.534 45.000 15.67 0.00 0.00 4.75
6394 10464 3.000727 AGAAGCACACGTTATAACAGGC 58.999 45.455 15.67 11.77 0.00 4.85
6395 10465 3.370978 CCAGAAGCACACGTTATAACAGG 59.629 47.826 15.67 8.85 0.00 4.00
6396 10466 3.994392 ACCAGAAGCACACGTTATAACAG 59.006 43.478 15.67 9.51 0.00 3.16
6398 10468 7.490402 AGTTATACCAGAAGCACACGTTATAAC 59.510 37.037 5.47 5.47 0.00 1.89
6400 10470 7.104043 AGTTATACCAGAAGCACACGTTATA 57.896 36.000 0.00 0.00 0.00 0.98
6402 10472 5.395682 AGTTATACCAGAAGCACACGTTA 57.604 39.130 0.00 0.00 0.00 3.18
6403 10473 4.267349 AGTTATACCAGAAGCACACGTT 57.733 40.909 0.00 0.00 0.00 3.99
6405 10475 5.588240 TCATAGTTATACCAGAAGCACACG 58.412 41.667 0.00 0.00 0.00 4.49
6406 10476 6.647067 GGATCATAGTTATACCAGAAGCACAC 59.353 42.308 0.00 0.00 0.00 3.82
6407 10477 6.554982 AGGATCATAGTTATACCAGAAGCACA 59.445 38.462 0.00 0.00 0.00 4.57
6408 10478 6.870965 CAGGATCATAGTTATACCAGAAGCAC 59.129 42.308 0.00 0.00 0.00 4.40
6409 10479 6.014242 CCAGGATCATAGTTATACCAGAAGCA 60.014 42.308 0.00 0.00 0.00 3.91
6411 10481 7.782897 TCCAGGATCATAGTTATACCAGAAG 57.217 40.000 0.00 0.00 0.00 2.85
6413 10483 7.306013 ACTTCCAGGATCATAGTTATACCAGA 58.694 38.462 0.00 0.00 0.00 3.86
6414 10484 7.546250 ACTTCCAGGATCATAGTTATACCAG 57.454 40.000 0.00 0.00 0.00 4.00
6415 10485 7.347222 ACAACTTCCAGGATCATAGTTATACCA 59.653 37.037 4.23 0.00 0.00 3.25
6416 10486 7.657761 CACAACTTCCAGGATCATAGTTATACC 59.342 40.741 4.23 0.00 0.00 2.73
6418 10488 7.217200 GCACAACTTCCAGGATCATAGTTATA 58.783 38.462 4.23 0.00 0.00 0.98
6419 10489 6.058183 GCACAACTTCCAGGATCATAGTTAT 58.942 40.000 4.23 0.00 0.00 1.89
6421 10491 4.265073 GCACAACTTCCAGGATCATAGTT 58.735 43.478 0.00 0.00 0.00 2.24
6423 10493 3.209410 GGCACAACTTCCAGGATCATAG 58.791 50.000 0.00 0.00 0.00 2.23
6424 10494 2.575735 TGGCACAACTTCCAGGATCATA 59.424 45.455 0.00 0.00 31.92 2.15
6425 10495 1.355381 TGGCACAACTTCCAGGATCAT 59.645 47.619 0.00 0.00 31.92 2.45
6426 10496 0.770499 TGGCACAACTTCCAGGATCA 59.230 50.000 0.00 0.00 31.92 2.92
6428 10498 3.658398 CTGGCACAACTTCCAGGAT 57.342 52.632 0.00 0.00 44.64 3.24
6432 10502 0.108585 GGAGTCTGGCACAACTTCCA 59.891 55.000 0.00 0.00 38.70 3.53
6433 10503 0.606673 GGGAGTCTGGCACAACTTCC 60.607 60.000 6.81 6.81 37.73 3.46
6434 10504 0.108585 TGGGAGTCTGGCACAACTTC 59.891 55.000 0.00 0.00 38.70 3.01
6435 10505 0.550914 TTGGGAGTCTGGCACAACTT 59.449 50.000 0.00 0.00 38.70 2.66
6436 10506 0.550914 TTTGGGAGTCTGGCACAACT 59.449 50.000 0.00 0.00 38.70 3.16
6437 10507 0.668535 GTTTGGGAGTCTGGCACAAC 59.331 55.000 0.00 0.00 38.70 3.32
6438 10508 0.550914 AGTTTGGGAGTCTGGCACAA 59.449 50.000 0.00 0.00 38.70 3.33
6439 10509 0.550914 AAGTTTGGGAGTCTGGCACA 59.449 50.000 0.00 0.00 0.00 4.57
6440 10510 2.561478 TAAGTTTGGGAGTCTGGCAC 57.439 50.000 0.00 0.00 0.00 5.01
6441 10511 3.806949 AATAAGTTTGGGAGTCTGGCA 57.193 42.857 0.00 0.00 0.00 4.92
6442 10512 4.079253 TCAAATAAGTTTGGGAGTCTGGC 58.921 43.478 1.55 0.00 43.85 4.85
6443 10513 5.070001 TGTCAAATAAGTTTGGGAGTCTGG 58.930 41.667 1.55 0.00 43.85 3.86
6444 10514 6.430925 TGATGTCAAATAAGTTTGGGAGTCTG 59.569 38.462 1.55 0.00 43.85 3.51
6445 10515 6.542821 TGATGTCAAATAAGTTTGGGAGTCT 58.457 36.000 1.55 0.00 43.85 3.24
6446 10516 6.127897 CCTGATGTCAAATAAGTTTGGGAGTC 60.128 42.308 1.55 0.00 43.85 3.36
6447 10517 5.711976 CCTGATGTCAAATAAGTTTGGGAGT 59.288 40.000 1.55 0.00 43.85 3.85
6448 10518 5.945784 TCCTGATGTCAAATAAGTTTGGGAG 59.054 40.000 1.55 0.00 43.85 4.30
6449 10519 5.710099 GTCCTGATGTCAAATAAGTTTGGGA 59.290 40.000 1.55 0.00 43.85 4.37
6452 10522 6.969366 TGTGTCCTGATGTCAAATAAGTTTG 58.031 36.000 0.00 0.00 44.81 2.93
6455 10525 4.697352 GCTGTGTCCTGATGTCAAATAAGT 59.303 41.667 0.00 0.00 0.00 2.24
6470 10540 1.618640 GCTCGAGTTTCGCTGTGTCC 61.619 60.000 15.13 0.00 40.21 4.02
6473 10543 1.275471 TTCGCTCGAGTTTCGCTGTG 61.275 55.000 15.13 0.00 40.21 3.66
6475 10545 0.716108 AATTCGCTCGAGTTTCGCTG 59.284 50.000 15.13 0.00 40.21 5.18
6476 10546 1.126846 CAAATTCGCTCGAGTTTCGCT 59.873 47.619 15.13 0.00 40.21 4.93
6479 10549 2.594529 TGCAAATTCGCTCGAGTTTC 57.405 45.000 15.13 0.00 32.90 2.78
6482 10552 3.492313 GAAATTGCAAATTCGCTCGAGT 58.508 40.909 15.13 0.00 0.00 4.18
6485 10555 1.919918 GGGAAATTGCAAATTCGCTCG 59.080 47.619 27.81 0.00 36.07 5.03
6591 10661 5.361427 TGCCTCGTTTATATCCAAATTCGA 58.639 37.500 0.00 0.00 0.00 3.71
6597 10667 5.680619 ACAATCTGCCTCGTTTATATCCAA 58.319 37.500 0.00 0.00 0.00 3.53
6708 10779 1.225426 GCTGGTCTCATGGCATCCA 59.775 57.895 0.00 0.61 38.19 3.41
6711 10782 2.191375 CGGCTGGTCTCATGGCAT 59.809 61.111 0.00 0.00 0.00 4.40
6737 10808 0.676151 GAGGCTGCTGCTGCTTAACT 60.676 55.000 26.79 17.10 40.48 2.24
6738 10809 0.957395 TGAGGCTGCTGCTGCTTAAC 60.957 55.000 26.79 16.81 40.48 2.01
6739 10810 0.957395 GTGAGGCTGCTGCTGCTTAA 60.957 55.000 26.79 13.39 40.48 1.85
6740 10811 1.376424 GTGAGGCTGCTGCTGCTTA 60.376 57.895 26.79 13.28 40.48 3.09
6741 10812 2.672307 GTGAGGCTGCTGCTGCTT 60.672 61.111 26.79 21.66 40.48 3.91
6764 10843 2.490217 CCTCCGAGCACCTGTACG 59.510 66.667 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.