Multiple sequence alignment - TraesCS3D01G324100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G324100 chr3D 100.000 4466 0 0 1 4466 437359577 437355112 0.000000e+00 8248.0
1 TraesCS3D01G324100 chr3D 96.865 319 10 0 1 319 437393822 437393504 6.580000e-148 534.0
2 TraesCS3D01G324100 chr3D 93.438 320 20 1 1 319 295208131 295208450 1.450000e-129 473.0
3 TraesCS3D01G324100 chr3A 91.156 1583 79 32 319 1850 575412094 575410522 0.000000e+00 2091.0
4 TraesCS3D01G324100 chr3A 92.996 1285 71 9 3187 4466 575409408 575408138 0.000000e+00 1857.0
5 TraesCS3D01G324100 chr3A 83.915 1032 118 31 1936 2938 575410532 575409520 0.000000e+00 942.0
6 TraesCS3D01G324100 chr3B 92.379 1286 78 8 3187 4466 572668692 572667421 0.000000e+00 1814.0
7 TraesCS3D01G324100 chr3B 92.254 994 49 17 886 1854 572670764 572669774 0.000000e+00 1384.0
8 TraesCS3D01G324100 chr3B 85.747 877 94 20 1936 2801 572669788 572668932 0.000000e+00 898.0
9 TraesCS3D01G324100 chr3B 84.043 94 10 4 2938 3028 544546258 544546167 7.960000e-13 86.1
10 TraesCS3D01G324100 chr5A 87.778 630 43 13 1964 2591 34716893 34717490 0.000000e+00 706.0
11 TraesCS3D01G324100 chr5A 83.275 287 19 12 2982 3259 34717732 34717998 2.080000e-58 237.0
12 TraesCS3D01G324100 chr5A 100.000 42 0 0 2548 2589 34717558 34717599 1.330000e-10 78.7
13 TraesCS3D01G324100 chr5D 95.298 319 15 0 1 319 137575774 137575456 1.430000e-139 507.0
14 TraesCS3D01G324100 chr5D 93.125 320 21 1 1 319 311494961 311495280 6.760000e-128 468.0
15 TraesCS3D01G324100 chr2D 94.771 306 16 0 8 313 279386238 279386543 1.120000e-130 477.0
16 TraesCS3D01G324100 chr2D 94.231 52 3 0 1879 1930 110673079 110673130 3.700000e-11 80.5
17 TraesCS3D01G324100 chr4D 93.910 312 19 0 8 319 242898443 242898754 5.230000e-129 472.0
18 TraesCS3D01G324100 chr4D 93.146 321 20 1 1 319 286514084 286514404 1.880000e-128 470.0
19 TraesCS3D01G324100 chr4D 93.103 319 22 0 1 319 323202343 323202025 6.760000e-128 468.0
20 TraesCS3D01G324100 chr7D 93.125 320 21 1 1 319 444450957 444451276 6.760000e-128 468.0
21 TraesCS3D01G324100 chr7D 94.545 55 3 0 3189 3243 632550593 632550539 7.960000e-13 86.1
22 TraesCS3D01G324100 chr2A 93.671 79 2 3 2939 3016 659894413 659894337 1.020000e-21 115.0
23 TraesCS3D01G324100 chr2B 94.595 74 2 2 2939 3012 607540360 607540289 3.650000e-21 113.0
24 TraesCS3D01G324100 chr2B 83.158 95 10 5 2938 3028 415997280 415997188 1.030000e-11 82.4
25 TraesCS3D01G324100 chr6D 87.234 94 5 5 2938 3028 97784095 97784006 2.840000e-17 100.0
26 TraesCS3D01G324100 chr5B 91.176 68 6 0 3187 3254 22353717 22353650 4.760000e-15 93.5
27 TraesCS3D01G324100 chr7B 84.043 94 10 4 2939 3029 607933411 607933320 7.960000e-13 86.1
28 TraesCS3D01G324100 chr7B 84.615 91 7 6 2941 3028 434925651 434925565 2.860000e-12 84.2
29 TraesCS3D01G324100 chr4A 83.871 93 12 3 2937 3028 459671529 459671439 7.960000e-13 86.1
30 TraesCS3D01G324100 chr7A 84.444 90 7 5 2939 3028 506142114 506142032 1.030000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G324100 chr3D 437355112 437359577 4465 True 8248.000000 8248 100.000000 1 4466 1 chr3D.!!$R1 4465
1 TraesCS3D01G324100 chr3A 575408138 575412094 3956 True 1630.000000 2091 89.355667 319 4466 3 chr3A.!!$R1 4147
2 TraesCS3D01G324100 chr3B 572667421 572670764 3343 True 1365.333333 1814 90.126667 886 4466 3 chr3B.!!$R2 3580
3 TraesCS3D01G324100 chr5A 34716893 34717998 1105 False 340.566667 706 90.351000 1964 3259 3 chr5A.!!$F1 1295

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
268 269 0.030101 GAGGGAGAGATCTTCGTGCG 59.970 60.0 0.00 0.0 0.00 5.34 F
389 390 0.030369 CCGGATCTACCACTACACGC 59.970 60.0 0.00 0.0 38.90 5.34 F
581 582 0.104304 CCCACGATAAGAAGGGACGG 59.896 60.0 0.00 0.0 39.80 4.79 F
1912 1970 0.980231 GGAGAGACTCCCACTGCCAT 60.980 60.0 6.54 0.0 44.36 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1588 1622 0.606604 TTCACGTACTCTGGGAAGCC 59.393 55.0 0.00 0.0 0.0 4.35 R
1894 1952 1.781786 TATGGCAGTGGGAGTCTCTC 58.218 55.0 0.00 0.0 0.0 3.20 R
1944 2002 2.133281 AGTGCTGCTATCAATTGCCA 57.867 45.0 0.00 0.0 0.0 4.92 R
3580 3851 0.390340 TGGCGCTGCAACAAAACAAA 60.390 45.0 7.64 0.0 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.396590 TAGCAAGGGACGGTTCATTC 57.603 50.000 0.00 0.00 0.00 2.67
20 21 0.400213 AGCAAGGGACGGTTCATTCA 59.600 50.000 0.00 0.00 0.00 2.57
21 22 0.804989 GCAAGGGACGGTTCATTCAG 59.195 55.000 0.00 0.00 0.00 3.02
22 23 1.610624 GCAAGGGACGGTTCATTCAGA 60.611 52.381 0.00 0.00 0.00 3.27
23 24 2.941415 GCAAGGGACGGTTCATTCAGAT 60.941 50.000 0.00 0.00 0.00 2.90
24 25 2.939103 CAAGGGACGGTTCATTCAGATC 59.061 50.000 0.00 0.00 0.00 2.75
25 26 2.187958 AGGGACGGTTCATTCAGATCA 58.812 47.619 0.00 0.00 0.00 2.92
26 27 2.093447 AGGGACGGTTCATTCAGATCAC 60.093 50.000 0.00 0.00 0.00 3.06
27 28 2.280628 GGACGGTTCATTCAGATCACC 58.719 52.381 0.00 0.00 0.00 4.02
28 29 2.280628 GACGGTTCATTCAGATCACCC 58.719 52.381 0.00 0.00 0.00 4.61
29 30 1.909302 ACGGTTCATTCAGATCACCCT 59.091 47.619 0.00 0.00 0.00 4.34
30 31 2.093447 ACGGTTCATTCAGATCACCCTC 60.093 50.000 0.00 0.00 0.00 4.30
31 32 2.093500 CGGTTCATTCAGATCACCCTCA 60.093 50.000 0.00 0.00 0.00 3.86
32 33 3.619733 CGGTTCATTCAGATCACCCTCAA 60.620 47.826 0.00 0.00 0.00 3.02
33 34 3.691609 GGTTCATTCAGATCACCCTCAAC 59.308 47.826 0.00 0.00 0.00 3.18
34 35 3.634397 TCATTCAGATCACCCTCAACC 57.366 47.619 0.00 0.00 0.00 3.77
35 36 2.912295 TCATTCAGATCACCCTCAACCA 59.088 45.455 0.00 0.00 0.00 3.67
36 37 2.859165 TTCAGATCACCCTCAACCAC 57.141 50.000 0.00 0.00 0.00 4.16
37 38 1.728323 TCAGATCACCCTCAACCACA 58.272 50.000 0.00 0.00 0.00 4.17
38 39 1.347707 TCAGATCACCCTCAACCACAC 59.652 52.381 0.00 0.00 0.00 3.82
39 40 1.072173 CAGATCACCCTCAACCACACA 59.928 52.381 0.00 0.00 0.00 3.72
40 41 1.774254 AGATCACCCTCAACCACACAA 59.226 47.619 0.00 0.00 0.00 3.33
41 42 2.154462 GATCACCCTCAACCACACAAG 58.846 52.381 0.00 0.00 0.00 3.16
42 43 0.465460 TCACCCTCAACCACACAAGC 60.465 55.000 0.00 0.00 0.00 4.01
43 44 0.466189 CACCCTCAACCACACAAGCT 60.466 55.000 0.00 0.00 0.00 3.74
44 45 0.179018 ACCCTCAACCACACAAGCTC 60.179 55.000 0.00 0.00 0.00 4.09
45 46 0.179020 CCCTCAACCACACAAGCTCA 60.179 55.000 0.00 0.00 0.00 4.26
46 47 0.947244 CCTCAACCACACAAGCTCAC 59.053 55.000 0.00 0.00 0.00 3.51
47 48 0.947244 CTCAACCACACAAGCTCACC 59.053 55.000 0.00 0.00 0.00 4.02
48 49 0.813610 TCAACCACACAAGCTCACCG 60.814 55.000 0.00 0.00 0.00 4.94
49 50 0.813610 CAACCACACAAGCTCACCGA 60.814 55.000 0.00 0.00 0.00 4.69
50 51 0.532862 AACCACACAAGCTCACCGAG 60.533 55.000 0.00 0.00 0.00 4.63
60 61 3.894257 CTCACCGAGCTCAAGAACA 57.106 52.632 15.40 0.00 0.00 3.18
61 62 1.423395 CTCACCGAGCTCAAGAACAC 58.577 55.000 15.40 0.00 0.00 3.32
62 63 0.033504 TCACCGAGCTCAAGAACACC 59.966 55.000 15.40 0.00 0.00 4.16
63 64 0.034059 CACCGAGCTCAAGAACACCT 59.966 55.000 15.40 0.00 0.00 4.00
64 65 0.318762 ACCGAGCTCAAGAACACCTC 59.681 55.000 15.40 0.00 0.00 3.85
65 66 0.605589 CCGAGCTCAAGAACACCTCT 59.394 55.000 15.40 0.00 35.13 3.69
66 67 1.403514 CCGAGCTCAAGAACACCTCTC 60.404 57.143 15.40 0.00 31.02 3.20
67 68 1.403514 CGAGCTCAAGAACACCTCTCC 60.404 57.143 15.40 0.00 31.02 3.71
68 69 1.899142 GAGCTCAAGAACACCTCTCCT 59.101 52.381 9.40 0.00 31.02 3.69
69 70 1.899142 AGCTCAAGAACACCTCTCCTC 59.101 52.381 0.00 0.00 31.02 3.71
70 71 1.620819 GCTCAAGAACACCTCTCCTCA 59.379 52.381 0.00 0.00 31.02 3.86
71 72 2.353605 GCTCAAGAACACCTCTCCTCAG 60.354 54.545 0.00 0.00 31.02 3.35
72 73 2.233431 CTCAAGAACACCTCTCCTCAGG 59.767 54.545 0.00 0.00 39.80 3.86
73 74 2.158310 TCAAGAACACCTCTCCTCAGGA 60.158 50.000 0.00 0.00 36.96 3.86
86 87 3.885724 CCTCAGGAGGTTCTTCTTCTC 57.114 52.381 7.19 0.00 43.61 2.87
87 88 3.440127 CCTCAGGAGGTTCTTCTTCTCT 58.560 50.000 7.19 0.00 43.61 3.10
88 89 3.837731 CCTCAGGAGGTTCTTCTTCTCTT 59.162 47.826 7.19 0.00 43.61 2.85
89 90 4.322650 CCTCAGGAGGTTCTTCTTCTCTTG 60.323 50.000 7.19 0.00 43.61 3.02
90 91 4.227197 TCAGGAGGTTCTTCTTCTCTTGT 58.773 43.478 0.00 0.00 36.45 3.16
91 92 5.394738 TCAGGAGGTTCTTCTTCTCTTGTA 58.605 41.667 0.00 0.00 36.45 2.41
92 93 5.244178 TCAGGAGGTTCTTCTTCTCTTGTAC 59.756 44.000 0.00 0.00 36.45 2.90
93 94 4.528987 AGGAGGTTCTTCTTCTCTTGTACC 59.471 45.833 0.00 0.00 0.00 3.34
94 95 4.528987 GGAGGTTCTTCTTCTCTTGTACCT 59.471 45.833 0.00 0.00 37.46 3.08
95 96 5.474825 GAGGTTCTTCTTCTCTTGTACCTG 58.525 45.833 0.00 0.00 35.04 4.00
96 97 4.902448 AGGTTCTTCTTCTCTTGTACCTGT 59.098 41.667 0.00 0.00 33.71 4.00
97 98 5.367060 AGGTTCTTCTTCTCTTGTACCTGTT 59.633 40.000 0.00 0.00 33.71 3.16
98 99 5.697178 GGTTCTTCTTCTCTTGTACCTGTTC 59.303 44.000 0.00 0.00 0.00 3.18
99 100 6.281405 GTTCTTCTTCTCTTGTACCTGTTCA 58.719 40.000 0.00 0.00 0.00 3.18
100 101 6.672266 TCTTCTTCTCTTGTACCTGTTCAT 57.328 37.500 0.00 0.00 0.00 2.57
101 102 6.692486 TCTTCTTCTCTTGTACCTGTTCATC 58.308 40.000 0.00 0.00 0.00 2.92
102 103 5.407407 TCTTCTCTTGTACCTGTTCATCC 57.593 43.478 0.00 0.00 0.00 3.51
103 104 4.223032 TCTTCTCTTGTACCTGTTCATCCC 59.777 45.833 0.00 0.00 0.00 3.85
104 105 2.838202 TCTCTTGTACCTGTTCATCCCC 59.162 50.000 0.00 0.00 0.00 4.81
105 106 2.571653 CTCTTGTACCTGTTCATCCCCA 59.428 50.000 0.00 0.00 0.00 4.96
106 107 2.571653 TCTTGTACCTGTTCATCCCCAG 59.428 50.000 0.00 0.00 0.00 4.45
107 108 0.618458 TGTACCTGTTCATCCCCAGC 59.382 55.000 0.00 0.00 0.00 4.85
108 109 0.107165 GTACCTGTTCATCCCCAGCC 60.107 60.000 0.00 0.00 0.00 4.85
109 110 0.253160 TACCTGTTCATCCCCAGCCT 60.253 55.000 0.00 0.00 0.00 4.58
110 111 0.253160 ACCTGTTCATCCCCAGCCTA 60.253 55.000 0.00 0.00 0.00 3.93
111 112 0.181350 CCTGTTCATCCCCAGCCTAC 59.819 60.000 0.00 0.00 0.00 3.18
112 113 0.911769 CTGTTCATCCCCAGCCTACA 59.088 55.000 0.00 0.00 0.00 2.74
113 114 1.281867 CTGTTCATCCCCAGCCTACAA 59.718 52.381 0.00 0.00 0.00 2.41
114 115 1.281867 TGTTCATCCCCAGCCTACAAG 59.718 52.381 0.00 0.00 0.00 3.16
115 116 0.918983 TTCATCCCCAGCCTACAAGG 59.081 55.000 0.00 0.00 38.80 3.61
125 126 3.976704 CCTACAAGGCAATCCACCA 57.023 52.632 0.00 0.00 33.74 4.17
126 127 1.463674 CCTACAAGGCAATCCACCAC 58.536 55.000 0.00 0.00 33.74 4.16
127 128 1.271871 CCTACAAGGCAATCCACCACA 60.272 52.381 0.00 0.00 33.74 4.17
128 129 1.812571 CTACAAGGCAATCCACCACAC 59.187 52.381 0.00 0.00 33.74 3.82
129 130 0.827507 ACAAGGCAATCCACCACACC 60.828 55.000 0.00 0.00 33.74 4.16
130 131 1.603455 AAGGCAATCCACCACACCG 60.603 57.895 0.00 0.00 33.74 4.94
131 132 3.747976 GGCAATCCACCACACCGC 61.748 66.667 0.00 0.00 0.00 5.68
132 133 2.983030 GCAATCCACCACACCGCA 60.983 61.111 0.00 0.00 0.00 5.69
133 134 2.953821 CAATCCACCACACCGCAC 59.046 61.111 0.00 0.00 0.00 5.34
134 135 1.600636 CAATCCACCACACCGCACT 60.601 57.895 0.00 0.00 0.00 4.40
135 136 1.600636 AATCCACCACACCGCACTG 60.601 57.895 0.00 0.00 0.00 3.66
136 137 3.551496 ATCCACCACACCGCACTGG 62.551 63.158 0.00 0.00 46.41 4.00
137 138 4.248842 CCACCACACCGCACTGGA 62.249 66.667 0.00 0.00 42.00 3.86
138 139 2.666190 CACCACACCGCACTGGAG 60.666 66.667 0.00 0.00 42.00 3.86
139 140 3.161450 ACCACACCGCACTGGAGT 61.161 61.111 0.00 0.00 42.93 3.85
140 141 1.835267 ACCACACCGCACTGGAGTA 60.835 57.895 0.00 0.00 39.83 2.59
141 142 1.079819 CCACACCGCACTGGAGTAG 60.080 63.158 0.00 0.00 39.83 2.57
142 143 1.079819 CACACCGCACTGGAGTAGG 60.080 63.158 0.00 0.00 39.83 3.18
143 144 2.283529 ACACCGCACTGGAGTAGGG 61.284 63.158 5.72 1.02 40.06 3.53
144 145 2.119832 ACCGCACTGGAGTAGGGT 59.880 61.111 5.72 1.55 42.00 4.34
145 146 0.968901 CACCGCACTGGAGTAGGGTA 60.969 60.000 1.73 0.00 42.00 3.69
146 147 0.032416 ACCGCACTGGAGTAGGGTAT 60.032 55.000 5.72 0.00 42.00 2.73
147 148 1.120530 CCGCACTGGAGTAGGGTATT 58.879 55.000 0.00 0.00 42.00 1.89
148 149 2.313317 CCGCACTGGAGTAGGGTATTA 58.687 52.381 0.00 0.00 42.00 0.98
149 150 2.035576 CCGCACTGGAGTAGGGTATTAC 59.964 54.545 0.00 0.00 42.00 1.89
150 151 2.691526 CGCACTGGAGTAGGGTATTACA 59.308 50.000 0.00 0.00 30.24 2.41
151 152 3.490419 CGCACTGGAGTAGGGTATTACAC 60.490 52.174 0.00 0.00 30.24 2.90
175 176 2.995547 GGTGGCCCGAACCAGTAT 59.004 61.111 0.00 0.00 41.46 2.12
176 177 2.214235 GGTGGCCCGAACCAGTATA 58.786 57.895 0.00 0.00 41.46 1.47
177 178 0.542805 GGTGGCCCGAACCAGTATAA 59.457 55.000 0.00 0.00 41.46 0.98
178 179 1.065272 GGTGGCCCGAACCAGTATAAA 60.065 52.381 0.00 0.00 41.46 1.40
179 180 2.011947 GTGGCCCGAACCAGTATAAAC 58.988 52.381 0.00 0.00 41.46 2.01
180 181 1.065272 TGGCCCGAACCAGTATAAACC 60.065 52.381 0.00 0.00 33.75 3.27
181 182 1.671979 GCCCGAACCAGTATAAACCC 58.328 55.000 0.00 0.00 0.00 4.11
182 183 1.211212 GCCCGAACCAGTATAAACCCT 59.789 52.381 0.00 0.00 0.00 4.34
183 184 2.356432 GCCCGAACCAGTATAAACCCTT 60.356 50.000 0.00 0.00 0.00 3.95
184 185 3.275999 CCCGAACCAGTATAAACCCTTG 58.724 50.000 0.00 0.00 0.00 3.61
185 186 3.307904 CCCGAACCAGTATAAACCCTTGT 60.308 47.826 0.00 0.00 0.00 3.16
186 187 3.687698 CCGAACCAGTATAAACCCTTGTG 59.312 47.826 0.00 0.00 0.00 3.33
187 188 4.320870 CGAACCAGTATAAACCCTTGTGT 58.679 43.478 0.00 0.00 0.00 3.72
188 189 4.390909 CGAACCAGTATAAACCCTTGTGTC 59.609 45.833 0.00 0.00 0.00 3.67
189 190 4.296621 ACCAGTATAAACCCTTGTGTCC 57.703 45.455 0.00 0.00 0.00 4.02
190 191 3.009805 ACCAGTATAAACCCTTGTGTCCC 59.990 47.826 0.00 0.00 0.00 4.46
191 192 3.617284 CAGTATAAACCCTTGTGTCCCC 58.383 50.000 0.00 0.00 0.00 4.81
192 193 3.265995 CAGTATAAACCCTTGTGTCCCCT 59.734 47.826 0.00 0.00 0.00 4.79
193 194 4.472108 CAGTATAAACCCTTGTGTCCCCTA 59.528 45.833 0.00 0.00 0.00 3.53
194 195 5.132144 CAGTATAAACCCTTGTGTCCCCTAT 59.868 44.000 0.00 0.00 0.00 2.57
195 196 5.734634 AGTATAAACCCTTGTGTCCCCTATT 59.265 40.000 0.00 0.00 0.00 1.73
196 197 3.451402 AAACCCTTGTGTCCCCTATTC 57.549 47.619 0.00 0.00 0.00 1.75
197 198 2.361085 ACCCTTGTGTCCCCTATTCT 57.639 50.000 0.00 0.00 0.00 2.40
198 199 2.644151 ACCCTTGTGTCCCCTATTCTT 58.356 47.619 0.00 0.00 0.00 2.52
199 200 2.576648 ACCCTTGTGTCCCCTATTCTTC 59.423 50.000 0.00 0.00 0.00 2.87
200 201 2.420129 CCCTTGTGTCCCCTATTCTTCG 60.420 54.545 0.00 0.00 0.00 3.79
201 202 2.500098 CCTTGTGTCCCCTATTCTTCGA 59.500 50.000 0.00 0.00 0.00 3.71
202 203 3.430929 CCTTGTGTCCCCTATTCTTCGAG 60.431 52.174 0.00 0.00 0.00 4.04
203 204 2.816411 TGTGTCCCCTATTCTTCGAGT 58.184 47.619 0.00 0.00 0.00 4.18
204 205 3.170717 TGTGTCCCCTATTCTTCGAGTT 58.829 45.455 0.00 0.00 0.00 3.01
205 206 3.194968 TGTGTCCCCTATTCTTCGAGTTC 59.805 47.826 0.00 0.00 0.00 3.01
206 207 2.426024 TGTCCCCTATTCTTCGAGTTCG 59.574 50.000 0.00 0.00 41.45 3.95
215 216 3.719144 TCGAGTTCGACGCGCTGA 61.719 61.111 5.73 0.00 44.22 4.26
216 217 3.234041 CGAGTTCGACGCGCTGAG 61.234 66.667 5.73 0.00 43.02 3.35
217 218 3.537297 GAGTTCGACGCGCTGAGC 61.537 66.667 5.73 6.46 43.95 4.26
218 219 3.955234 GAGTTCGACGCGCTGAGCT 62.955 63.158 15.52 15.52 45.59 4.09
219 220 3.106407 GTTCGACGCGCTGAGCTT 61.106 61.111 5.73 0.00 45.59 3.74
220 221 2.355837 TTCGACGCGCTGAGCTTT 60.356 55.556 5.73 0.00 45.59 3.51
221 222 2.657757 TTCGACGCGCTGAGCTTTG 61.658 57.895 5.73 0.00 45.59 2.77
222 223 3.105782 CGACGCGCTGAGCTTTGA 61.106 61.111 5.73 0.00 45.59 2.69
223 224 2.774774 GACGCGCTGAGCTTTGAG 59.225 61.111 5.73 0.00 45.59 3.02
224 225 1.734477 GACGCGCTGAGCTTTGAGA 60.734 57.895 5.73 0.00 45.59 3.27
225 226 1.079543 ACGCGCTGAGCTTTGAGAT 60.080 52.632 5.73 0.00 45.59 2.75
226 227 1.080995 ACGCGCTGAGCTTTGAGATC 61.081 55.000 5.73 0.00 45.59 2.75
227 228 1.635281 GCGCTGAGCTTTGAGATCG 59.365 57.895 1.78 0.00 44.04 3.69
228 229 1.080995 GCGCTGAGCTTTGAGATCGT 61.081 55.000 1.78 0.00 44.04 3.73
229 230 0.644331 CGCTGAGCTTTGAGATCGTG 59.356 55.000 1.78 0.00 32.29 4.35
230 231 1.005340 GCTGAGCTTTGAGATCGTGG 58.995 55.000 0.00 0.00 32.29 4.94
231 232 1.005340 CTGAGCTTTGAGATCGTGGC 58.995 55.000 0.00 0.00 32.29 5.01
232 233 0.737367 TGAGCTTTGAGATCGTGGCG 60.737 55.000 0.00 0.00 32.29 5.69
233 234 0.458543 GAGCTTTGAGATCGTGGCGA 60.459 55.000 0.00 0.00 41.13 5.54
234 235 0.459237 AGCTTTGAGATCGTGGCGAG 60.459 55.000 0.00 0.00 39.91 5.03
235 236 0.737715 GCTTTGAGATCGTGGCGAGT 60.738 55.000 0.00 0.00 39.91 4.18
236 237 0.994995 CTTTGAGATCGTGGCGAGTG 59.005 55.000 0.00 0.00 39.91 3.51
237 238 0.317160 TTTGAGATCGTGGCGAGTGT 59.683 50.000 0.00 0.00 39.91 3.55
238 239 0.388520 TTGAGATCGTGGCGAGTGTG 60.389 55.000 0.00 0.00 39.91 3.82
239 240 1.213013 GAGATCGTGGCGAGTGTGT 59.787 57.895 0.00 0.00 39.91 3.72
240 241 1.073216 GAGATCGTGGCGAGTGTGTG 61.073 60.000 0.00 0.00 39.91 3.82
241 242 1.080772 GATCGTGGCGAGTGTGTGA 60.081 57.895 0.00 0.00 39.91 3.58
242 243 1.073216 GATCGTGGCGAGTGTGTGAG 61.073 60.000 0.00 0.00 39.91 3.51
243 244 3.406361 CGTGGCGAGTGTGTGAGC 61.406 66.667 0.00 0.00 0.00 4.26
244 245 2.029666 GTGGCGAGTGTGTGAGCT 59.970 61.111 0.00 0.00 0.00 4.09
245 246 1.289066 GTGGCGAGTGTGTGAGCTA 59.711 57.895 0.00 0.00 0.00 3.32
246 247 0.734253 GTGGCGAGTGTGTGAGCTAG 60.734 60.000 0.00 0.00 0.00 3.42
247 248 1.153745 GGCGAGTGTGTGAGCTAGG 60.154 63.158 0.00 0.00 0.00 3.02
248 249 1.153745 GCGAGTGTGTGAGCTAGGG 60.154 63.158 0.00 0.00 0.00 3.53
249 250 1.513158 CGAGTGTGTGAGCTAGGGG 59.487 63.158 0.00 0.00 0.00 4.79
250 251 0.965866 CGAGTGTGTGAGCTAGGGGA 60.966 60.000 0.00 0.00 0.00 4.81
251 252 0.820871 GAGTGTGTGAGCTAGGGGAG 59.179 60.000 0.00 0.00 0.00 4.30
252 253 0.616111 AGTGTGTGAGCTAGGGGAGG 60.616 60.000 0.00 0.00 0.00 4.30
253 254 1.306141 TGTGTGAGCTAGGGGAGGG 60.306 63.158 0.00 0.00 0.00 4.30
254 255 1.001760 GTGTGAGCTAGGGGAGGGA 59.998 63.158 0.00 0.00 0.00 4.20
255 256 1.045911 GTGTGAGCTAGGGGAGGGAG 61.046 65.000 0.00 0.00 0.00 4.30
256 257 1.221909 TGTGAGCTAGGGGAGGGAGA 61.222 60.000 0.00 0.00 0.00 3.71
257 258 0.469144 GTGAGCTAGGGGAGGGAGAG 60.469 65.000 0.00 0.00 0.00 3.20
258 259 0.627768 TGAGCTAGGGGAGGGAGAGA 60.628 60.000 0.00 0.00 0.00 3.10
259 260 0.783850 GAGCTAGGGGAGGGAGAGAT 59.216 60.000 0.00 0.00 0.00 2.75
260 261 0.783850 AGCTAGGGGAGGGAGAGATC 59.216 60.000 0.00 0.00 0.00 2.75
261 262 0.783850 GCTAGGGGAGGGAGAGATCT 59.216 60.000 0.00 0.00 0.00 2.75
262 263 1.149077 GCTAGGGGAGGGAGAGATCTT 59.851 57.143 0.00 0.00 0.00 2.40
263 264 2.821625 GCTAGGGGAGGGAGAGATCTTC 60.822 59.091 0.00 0.00 0.00 2.87
264 265 0.187361 AGGGGAGGGAGAGATCTTCG 59.813 60.000 0.00 0.00 0.00 3.79
265 266 0.105913 GGGGAGGGAGAGATCTTCGT 60.106 60.000 0.00 0.00 0.00 3.85
266 267 1.036707 GGGAGGGAGAGATCTTCGTG 58.963 60.000 0.00 0.00 0.00 4.35
267 268 0.387565 GGAGGGAGAGATCTTCGTGC 59.612 60.000 0.00 0.00 0.00 5.34
268 269 0.030101 GAGGGAGAGATCTTCGTGCG 59.970 60.000 0.00 0.00 0.00 5.34
269 270 1.590259 GGGAGAGATCTTCGTGCGC 60.590 63.158 0.00 0.00 0.00 6.09
270 271 1.139734 GGAGAGATCTTCGTGCGCA 59.860 57.895 5.66 5.66 0.00 6.09
271 272 1.142778 GGAGAGATCTTCGTGCGCAC 61.143 60.000 30.42 30.42 0.00 5.34
272 273 1.142778 GAGAGATCTTCGTGCGCACC 61.143 60.000 33.23 18.62 0.00 5.01
273 274 2.125512 AGATCTTCGTGCGCACCC 60.126 61.111 33.23 11.71 0.00 4.61
274 275 3.195698 GATCTTCGTGCGCACCCC 61.196 66.667 33.23 10.90 0.00 4.95
275 276 3.950794 GATCTTCGTGCGCACCCCA 62.951 63.158 33.23 15.79 0.00 4.96
276 277 3.958147 ATCTTCGTGCGCACCCCAG 62.958 63.158 33.23 24.67 0.00 4.45
277 278 4.988598 CTTCGTGCGCACCCCAGT 62.989 66.667 33.23 0.00 0.00 4.00
281 282 3.660111 GTGCGCACCCCAGTGTTC 61.660 66.667 30.12 0.00 46.35 3.18
283 284 4.980805 GCGCACCCCAGTGTTCGA 62.981 66.667 0.30 0.00 46.35 3.71
284 285 2.280524 CGCACCCCAGTGTTCGAA 60.281 61.111 0.00 0.00 46.35 3.71
285 286 2.604174 CGCACCCCAGTGTTCGAAC 61.604 63.158 21.42 21.42 46.35 3.95
286 287 2.258726 GCACCCCAGTGTTCGAACC 61.259 63.158 24.78 15.84 46.35 3.62
287 288 1.450211 CACCCCAGTGTTCGAACCT 59.550 57.895 24.78 17.73 39.30 3.50
288 289 0.179029 CACCCCAGTGTTCGAACCTT 60.179 55.000 24.78 10.58 39.30 3.50
289 290 1.071071 CACCCCAGTGTTCGAACCTTA 59.929 52.381 24.78 4.16 39.30 2.69
290 291 1.770061 ACCCCAGTGTTCGAACCTTAA 59.230 47.619 24.78 3.77 0.00 1.85
291 292 2.224450 ACCCCAGTGTTCGAACCTTAAG 60.224 50.000 24.78 11.88 0.00 1.85
292 293 2.423577 CCCAGTGTTCGAACCTTAAGG 58.576 52.381 24.78 20.42 42.17 2.69
293 294 2.423577 CCAGTGTTCGAACCTTAAGGG 58.576 52.381 25.31 13.92 40.27 3.95
303 304 3.349879 CCTTAAGGGTTTTGCGGGA 57.650 52.632 14.25 0.00 0.00 5.14
304 305 1.623163 CCTTAAGGGTTTTGCGGGAA 58.377 50.000 14.25 0.00 0.00 3.97
305 306 1.271379 CCTTAAGGGTTTTGCGGGAAC 59.729 52.381 14.25 0.00 0.00 3.62
331 332 5.522460 CGAAATCCGACACCATTAGTTGTAT 59.478 40.000 0.00 0.00 41.76 2.29
334 335 4.751060 TCCGACACCATTAGTTGTATCAC 58.249 43.478 0.00 0.00 0.00 3.06
341 342 5.001232 ACCATTAGTTGTATCACTTTGCGT 58.999 37.500 0.00 0.00 0.00 5.24
372 373 0.608640 AGAGTTCCCACTTAGCACCG 59.391 55.000 0.00 0.00 31.22 4.94
389 390 0.030369 CCGGATCTACCACTACACGC 59.970 60.000 0.00 0.00 38.90 5.34
422 423 5.414454 TGTGAGAAAACACATATACAAGGCC 59.586 40.000 0.00 0.00 44.29 5.19
452 453 7.465116 AGGATCTAAATATAAGGTGCATTGCT 58.535 34.615 10.49 0.00 0.00 3.91
453 454 7.392673 AGGATCTAAATATAAGGTGCATTGCTG 59.607 37.037 10.49 0.00 0.00 4.41
458 459 0.676466 TAAGGTGCATTGCTGGGACG 60.676 55.000 10.49 0.00 0.00 4.79
478 479 0.322546 GTTCCTTGCCCCGTTCTCAT 60.323 55.000 0.00 0.00 0.00 2.90
510 511 2.027751 GGCGGCGACTGATCTACC 59.972 66.667 12.98 0.00 0.00 3.18
551 552 0.343726 CCTTCTACCCTCCCCCTTCT 59.656 60.000 0.00 0.00 0.00 2.85
560 561 1.141858 CCTCCCCCTTCTGTCTATTGC 59.858 57.143 0.00 0.00 0.00 3.56
581 582 0.104304 CCCACGATAAGAAGGGACGG 59.896 60.000 0.00 0.00 39.80 4.79
596 597 1.270358 GGACGGAGACTTCAAGTGCTT 60.270 52.381 0.00 0.00 0.00 3.91
600 601 1.270358 GGAGACTTCAAGTGCTTCGGT 60.270 52.381 0.00 0.00 0.00 4.69
614 615 3.825014 TGCTTCGGTCTAGTGAAGTTAGT 59.175 43.478 17.27 0.00 42.77 2.24
644 645 8.832735 AGGATAAAATTTAGGTTGTACTCTCCA 58.167 33.333 0.00 0.00 0.00 3.86
645 646 9.628500 GGATAAAATTTAGGTTGTACTCTCCAT 57.372 33.333 0.00 0.00 0.00 3.41
649 650 4.737855 TTAGGTTGTACTCTCCATCAGC 57.262 45.455 0.00 0.00 0.00 4.26
650 651 2.540383 AGGTTGTACTCTCCATCAGCA 58.460 47.619 0.00 0.00 0.00 4.41
655 668 1.204941 GTACTCTCCATCAGCAACGGT 59.795 52.381 0.00 0.00 0.00 4.83
681 694 4.713824 TCGTCGATGTGAAATAAGGTCT 57.286 40.909 4.21 0.00 0.00 3.85
684 697 5.587443 TCGTCGATGTGAAATAAGGTCTCTA 59.413 40.000 4.21 0.00 0.00 2.43
685 698 6.262496 TCGTCGATGTGAAATAAGGTCTCTAT 59.738 38.462 4.21 0.00 0.00 1.98
694 707 6.500751 TGAAATAAGGTCTCTATACCCCATCC 59.499 42.308 0.00 0.00 40.71 3.51
699 712 4.292836 AGGTCTCTATACCCCATCCTAGTC 59.707 50.000 0.00 0.00 40.71 2.59
720 733 1.299541 GGTGGTGCATCTTCGTATGG 58.700 55.000 0.00 0.00 0.00 2.74
766 779 1.522569 GGATCTGGTTCTCCGGGTG 59.477 63.158 0.00 0.00 40.36 4.61
775 788 4.087892 CTCCGGGTGTGGCTCCAG 62.088 72.222 0.00 0.00 0.00 3.86
784 797 2.922503 TGGCTCCAGTTCCTCGCA 60.923 61.111 0.00 0.00 0.00 5.10
794 807 3.365364 CCAGTTCCTCGCATTTTGACTTC 60.365 47.826 0.00 0.00 0.00 3.01
805 818 6.926826 TCGCATTTTGACTTCTCACTAAGTTA 59.073 34.615 0.00 0.00 39.78 2.24
918 951 2.788210 AAACTTAGCCCAGGCCTGCC 62.788 60.000 28.39 19.41 43.17 4.85
1098 1132 2.043450 CTCCGCTCCCTCTCCACT 60.043 66.667 0.00 0.00 0.00 4.00
1592 1626 1.036707 GAGATCCTGCTAGACGGCTT 58.963 55.000 0.00 0.00 0.00 4.35
1676 1724 7.067372 TCGTGTATCGAAAATCTAGGGTTCTAA 59.933 37.037 0.00 0.00 45.98 2.10
1679 1727 9.542462 TGTATCGAAAATCTAGGGTTCTAATTG 57.458 33.333 0.00 0.00 0.00 2.32
1684 1732 8.610035 CGAAAATCTAGGGTTCTAATTGGTAAC 58.390 37.037 0.00 0.00 0.00 2.50
1685 1733 8.818622 AAAATCTAGGGTTCTAATTGGTAACC 57.181 34.615 11.93 11.93 41.62 2.85
1710 1763 7.012799 CCCTCTGGTTTTATTTAAGAGAGCATC 59.987 40.741 0.00 0.00 37.20 3.91
1713 1766 9.466497 TCTGGTTTTATTTAAGAGAGCATCATT 57.534 29.630 0.00 0.00 37.82 2.57
1725 1778 7.747155 AGAGAGCATCATTAGGAAATCAATG 57.253 36.000 0.00 0.00 37.82 2.82
1728 1781 7.288560 AGAGCATCATTAGGAAATCAATGACT 58.711 34.615 0.00 0.00 42.33 3.41
1730 1783 8.618702 AGCATCATTAGGAAATCAATGACTAG 57.381 34.615 0.00 0.00 42.33 2.57
1740 1793 9.745018 AGGAAATCAATGACTAGAAGAAATTGA 57.255 29.630 0.00 4.96 40.45 2.57
1772 1826 4.288670 TCGTAAGAGGTCTGCTAATTCG 57.711 45.455 0.00 0.00 45.01 3.34
1773 1827 2.789893 CGTAAGAGGTCTGCTAATTCGC 59.210 50.000 0.00 0.00 43.02 4.70
1774 1828 3.733988 CGTAAGAGGTCTGCTAATTCGCA 60.734 47.826 4.42 4.42 43.02 5.10
1778 1836 3.003480 GAGGTCTGCTAATTCGCAACTT 58.997 45.455 6.10 4.34 39.80 2.66
1779 1837 3.003480 AGGTCTGCTAATTCGCAACTTC 58.997 45.455 6.10 0.00 39.80 3.01
1782 1840 2.742053 TCTGCTAATTCGCAACTTCACC 59.258 45.455 6.10 0.00 39.80 4.02
1791 1849 1.795286 CGCAACTTCACCAAGTCTCTC 59.205 52.381 0.00 0.00 42.45 3.20
1794 1852 3.312828 CAACTTCACCAAGTCTCTCGAG 58.687 50.000 5.93 5.93 42.45 4.04
1797 1855 3.385111 ACTTCACCAAGTCTCTCGAGTTT 59.615 43.478 13.13 0.60 38.62 2.66
1806 1864 4.054671 AGTCTCTCGAGTTTTTGCTTCAG 58.945 43.478 13.13 0.00 0.00 3.02
1830 1888 8.230472 AGGCAGTTTATTCCTGAATAGAAATG 57.770 34.615 12.53 12.53 35.02 2.32
1850 1908 2.651382 TCCAATGCTCTGGATCATGG 57.349 50.000 3.47 0.00 40.71 3.66
1854 1912 2.429250 CAATGCTCTGGATCATGGCAAA 59.571 45.455 0.00 0.00 36.49 3.68
1855 1913 2.219080 TGCTCTGGATCATGGCAAAA 57.781 45.000 0.00 0.00 0.00 2.44
1856 1914 2.527497 TGCTCTGGATCATGGCAAAAA 58.473 42.857 0.00 0.00 0.00 1.94
1880 1938 8.907222 AAAAATTTACCATTGAAAGACAGCAT 57.093 26.923 0.00 0.00 0.00 3.79
1881 1939 8.907222 AAAATTTACCATTGAAAGACAGCATT 57.093 26.923 0.00 0.00 0.00 3.56
1882 1940 7.894376 AATTTACCATTGAAAGACAGCATTG 57.106 32.000 0.00 0.00 0.00 2.82
1883 1941 6.647334 TTTACCATTGAAAGACAGCATTGA 57.353 33.333 0.00 0.00 0.00 2.57
1884 1942 6.647334 TTACCATTGAAAGACAGCATTGAA 57.353 33.333 0.00 0.00 0.00 2.69
1885 1943 5.534207 ACCATTGAAAGACAGCATTGAAA 57.466 34.783 0.00 0.00 0.00 2.69
1886 1944 5.535333 ACCATTGAAAGACAGCATTGAAAG 58.465 37.500 0.00 0.00 0.00 2.62
1887 1945 5.302568 ACCATTGAAAGACAGCATTGAAAGA 59.697 36.000 0.00 0.00 0.00 2.52
1888 1946 5.632347 CCATTGAAAGACAGCATTGAAAGAC 59.368 40.000 0.00 0.00 0.00 3.01
1889 1947 5.833406 TTGAAAGACAGCATTGAAAGACA 57.167 34.783 0.00 0.00 0.00 3.41
1890 1948 5.428496 TGAAAGACAGCATTGAAAGACAG 57.572 39.130 0.00 0.00 0.00 3.51
1891 1949 4.883585 TGAAAGACAGCATTGAAAGACAGT 59.116 37.500 0.00 0.00 0.00 3.55
1892 1950 4.825546 AAGACAGCATTGAAAGACAGTG 57.174 40.909 0.00 0.00 38.88 3.66
1893 1951 3.144506 AGACAGCATTGAAAGACAGTGG 58.855 45.455 0.00 0.00 36.85 4.00
1894 1952 2.227388 GACAGCATTGAAAGACAGTGGG 59.773 50.000 0.00 0.00 36.85 4.61
1895 1953 2.158623 ACAGCATTGAAAGACAGTGGGA 60.159 45.455 0.00 0.00 36.85 4.37
1896 1954 2.486982 CAGCATTGAAAGACAGTGGGAG 59.513 50.000 0.00 0.00 36.85 4.30
1897 1955 2.373169 AGCATTGAAAGACAGTGGGAGA 59.627 45.455 0.00 0.00 36.85 3.71
1898 1956 2.746362 GCATTGAAAGACAGTGGGAGAG 59.254 50.000 0.00 0.00 36.85 3.20
1899 1957 3.557898 GCATTGAAAGACAGTGGGAGAGA 60.558 47.826 0.00 0.00 36.85 3.10
1900 1958 3.753294 TTGAAAGACAGTGGGAGAGAC 57.247 47.619 0.00 0.00 0.00 3.36
1901 1959 2.964209 TGAAAGACAGTGGGAGAGACT 58.036 47.619 0.00 0.00 0.00 3.24
1902 1960 2.894126 TGAAAGACAGTGGGAGAGACTC 59.106 50.000 0.00 0.00 0.00 3.36
1910 1968 3.304251 GGAGAGACTCCCACTGCC 58.696 66.667 6.54 0.00 44.36 4.85
1911 1969 1.610673 GGAGAGACTCCCACTGCCA 60.611 63.158 6.54 0.00 44.36 4.92
1912 1970 0.980231 GGAGAGACTCCCACTGCCAT 60.980 60.000 6.54 0.00 44.36 4.40
1913 1971 1.689575 GGAGAGACTCCCACTGCCATA 60.690 57.143 6.54 0.00 44.36 2.74
1914 1972 2.324541 GAGAGACTCCCACTGCCATAT 58.675 52.381 0.00 0.00 0.00 1.78
1915 1973 3.501349 GAGAGACTCCCACTGCCATATA 58.499 50.000 0.00 0.00 0.00 0.86
1916 1974 4.093011 GAGAGACTCCCACTGCCATATAT 58.907 47.826 0.00 0.00 0.00 0.86
1917 1975 4.497516 AGAGACTCCCACTGCCATATATT 58.502 43.478 0.00 0.00 0.00 1.28
1918 1976 5.655394 AGAGACTCCCACTGCCATATATTA 58.345 41.667 0.00 0.00 0.00 0.98
1919 1977 5.482175 AGAGACTCCCACTGCCATATATTAC 59.518 44.000 0.00 0.00 0.00 1.89
1920 1978 5.407049 AGACTCCCACTGCCATATATTACT 58.593 41.667 0.00 0.00 0.00 2.24
1921 1979 5.482175 AGACTCCCACTGCCATATATTACTC 59.518 44.000 0.00 0.00 0.00 2.59
1922 1980 5.155161 ACTCCCACTGCCATATATTACTCA 58.845 41.667 0.00 0.00 0.00 3.41
1923 1981 5.247110 ACTCCCACTGCCATATATTACTCAG 59.753 44.000 0.00 0.00 0.00 3.35
1924 1982 4.532126 TCCCACTGCCATATATTACTCAGG 59.468 45.833 0.00 0.00 0.00 3.86
1925 1983 4.256920 CCACTGCCATATATTACTCAGGC 58.743 47.826 0.00 0.00 42.32 4.85
1933 1991 9.613428 TGCCATATATTACTCAGGCATAATTAC 57.387 33.333 7.85 0.00 46.25 1.89
1934 1992 9.613428 GCCATATATTACTCAGGCATAATTACA 57.387 33.333 4.96 0.00 41.63 2.41
1939 1997 9.896645 ATATTACTCAGGCATAATTACATCTGG 57.103 33.333 9.48 5.21 0.00 3.86
1940 1998 5.894298 ACTCAGGCATAATTACATCTGGA 57.106 39.130 9.48 0.00 0.00 3.86
1941 1999 6.445451 ACTCAGGCATAATTACATCTGGAT 57.555 37.500 9.48 0.00 0.00 3.41
1942 2000 6.471146 ACTCAGGCATAATTACATCTGGATC 58.529 40.000 9.48 0.00 0.00 3.36
1943 2001 6.043590 ACTCAGGCATAATTACATCTGGATCA 59.956 38.462 0.00 0.00 0.00 2.92
1944 2002 7.024345 TCAGGCATAATTACATCTGGATCAT 57.976 36.000 0.00 0.00 0.00 2.45
1945 2003 6.882678 TCAGGCATAATTACATCTGGATCATG 59.117 38.462 0.00 0.00 0.00 3.07
1946 2004 6.095021 CAGGCATAATTACATCTGGATCATGG 59.905 42.308 0.00 0.00 0.00 3.66
1947 2005 5.163581 GGCATAATTACATCTGGATCATGGC 60.164 44.000 0.00 0.00 0.00 4.40
1948 2006 5.416639 GCATAATTACATCTGGATCATGGCA 59.583 40.000 0.00 0.00 0.00 4.92
1949 2007 6.071784 GCATAATTACATCTGGATCATGGCAA 60.072 38.462 0.00 0.00 0.00 4.52
1950 2008 7.363530 GCATAATTACATCTGGATCATGGCAAT 60.364 37.037 0.00 0.00 0.00 3.56
1951 2009 6.989155 AATTACATCTGGATCATGGCAATT 57.011 33.333 0.00 0.00 0.00 2.32
1952 2010 5.777850 TTACATCTGGATCATGGCAATTG 57.222 39.130 0.00 0.00 0.00 2.32
1953 2011 3.905968 ACATCTGGATCATGGCAATTGA 58.094 40.909 10.34 0.00 0.00 2.57
1954 2012 4.480115 ACATCTGGATCATGGCAATTGAT 58.520 39.130 10.34 3.31 36.54 2.57
1955 2013 5.637127 ACATCTGGATCATGGCAATTGATA 58.363 37.500 10.34 0.00 34.03 2.15
1956 2014 5.710567 ACATCTGGATCATGGCAATTGATAG 59.289 40.000 10.34 0.11 34.03 2.08
1957 2015 4.077108 TCTGGATCATGGCAATTGATAGC 58.923 43.478 10.34 0.00 34.03 2.97
1958 2016 3.824443 CTGGATCATGGCAATTGATAGCA 59.176 43.478 10.34 0.00 34.03 3.49
1959 2017 3.824443 TGGATCATGGCAATTGATAGCAG 59.176 43.478 10.34 0.00 34.03 4.24
1960 2018 3.367087 GGATCATGGCAATTGATAGCAGC 60.367 47.826 10.34 0.00 34.03 5.25
1961 2019 2.657143 TCATGGCAATTGATAGCAGCA 58.343 42.857 10.34 0.00 0.00 4.41
1962 2020 2.359848 TCATGGCAATTGATAGCAGCAC 59.640 45.455 10.34 0.00 0.00 4.40
1963 2021 2.133281 TGGCAATTGATAGCAGCACT 57.867 45.000 10.34 0.00 0.00 4.40
1964 2022 2.449464 TGGCAATTGATAGCAGCACTT 58.551 42.857 10.34 0.00 0.00 3.16
2093 2152 6.855763 ATGGTTGCTGAAATGAAATAAGGA 57.144 33.333 0.00 0.00 0.00 3.36
2095 2154 6.690530 TGGTTGCTGAAATGAAATAAGGAAG 58.309 36.000 0.00 0.00 0.00 3.46
2096 2155 6.267471 TGGTTGCTGAAATGAAATAAGGAAGT 59.733 34.615 0.00 0.00 0.00 3.01
2140 2199 6.110543 AGAAAGCGTTAAACTACGTGTTTT 57.889 33.333 17.16 10.32 45.69 2.43
2154 2213 3.369451 ACGTGTTTTTGTTGCAAATGGTC 59.631 39.130 0.00 0.00 0.00 4.02
2177 2237 6.208599 GTCCTATAGAGTTCTTCCAGGATGAG 59.791 46.154 0.00 0.00 39.69 2.90
2259 2323 4.031636 AGCTCAGCTGGATTCTTTTTCT 57.968 40.909 15.13 0.00 37.57 2.52
2260 2324 4.405548 AGCTCAGCTGGATTCTTTTTCTT 58.594 39.130 15.13 0.00 37.57 2.52
2261 2325 4.458642 AGCTCAGCTGGATTCTTTTTCTTC 59.541 41.667 15.13 0.00 37.57 2.87
2262 2326 4.458642 GCTCAGCTGGATTCTTTTTCTTCT 59.541 41.667 15.13 0.00 0.00 2.85
2263 2327 5.619533 GCTCAGCTGGATTCTTTTTCTTCTG 60.620 44.000 15.13 0.00 0.00 3.02
2264 2328 5.624159 TCAGCTGGATTCTTTTTCTTCTGA 58.376 37.500 15.13 0.00 0.00 3.27
2294 2358 6.849085 TTTAGGTGTGTATTACCGGTTAGA 57.151 37.500 15.04 0.00 43.06 2.10
2322 2386 9.426837 CAACATTATATCCATAAAGGCAATTGG 57.573 33.333 7.72 0.00 37.29 3.16
2329 2393 5.533112 TCCATAAAGGCAATTGGGGAATTA 58.467 37.500 7.72 0.00 37.29 1.40
2369 2433 9.607988 AATTTGGTTTTAACTTCTTGGTAAAGG 57.392 29.630 0.00 0.00 38.82 3.11
2370 2434 6.151663 TGGTTTTAACTTCTTGGTAAAGGC 57.848 37.500 0.00 0.00 38.82 4.35
2385 2462 6.948589 TGGTAAAGGCTACATGTTATGTACA 58.051 36.000 2.30 0.00 44.38 2.90
2398 2475 8.600625 ACATGTTATGTACAGTACTAAATTGCG 58.399 33.333 12.07 0.00 42.78 4.85
2409 2486 5.919141 AGTACTAAATTGCGCTTATACTCCG 59.081 40.000 9.73 0.00 0.00 4.63
2425 2502 6.971726 ATACTCCGTAACTCCATATTCACA 57.028 37.500 0.00 0.00 0.00 3.58
2458 2535 8.739972 ACTGTTTAAGAATTGTCTGTGTTTCTT 58.260 29.630 0.00 0.00 40.49 2.52
2468 2545 5.412640 TGTCTGTGTTTCTTTCGTGAGTAA 58.587 37.500 0.00 0.00 0.00 2.24
2528 2605 8.213489 TGGAATTGCACATATTACTCCCTATA 57.787 34.615 0.00 0.00 0.00 1.31
2529 2606 8.835734 TGGAATTGCACATATTACTCCCTATAT 58.164 33.333 0.00 0.00 0.00 0.86
2632 2819 3.330701 ACTTCAAAGTTATGCCTGAGGGA 59.669 43.478 0.00 0.00 35.21 4.20
2677 2864 4.220382 CCTGATGAGGTCCTGTATGAGATC 59.780 50.000 0.00 0.00 34.16 2.75
2680 2867 3.838565 TGAGGTCCTGTATGAGATCTCC 58.161 50.000 20.03 5.43 39.14 3.71
2746 2933 5.993748 TGGAGTTCAACAAGAAAAAGGTT 57.006 34.783 0.00 0.00 38.13 3.50
2751 2938 3.855858 TCAACAAGAAAAAGGTTGGCAC 58.144 40.909 0.00 0.00 41.59 5.01
2754 2941 4.486125 ACAAGAAAAAGGTTGGCACATT 57.514 36.364 0.00 0.00 39.30 2.71
2755 2942 5.606348 ACAAGAAAAAGGTTGGCACATTA 57.394 34.783 0.00 0.00 39.30 1.90
2778 2965 9.875691 ATTACATTTTCTTTGCTCCCTTTTATC 57.124 29.630 0.00 0.00 0.00 1.75
2801 2988 3.881937 ATTTGCTGAAAGAGAATGGCC 57.118 42.857 0.00 0.00 34.07 5.36
2802 2989 2.291209 TTGCTGAAAGAGAATGGCCA 57.709 45.000 8.56 8.56 34.07 5.36
2805 2992 3.167485 TGCTGAAAGAGAATGGCCATTT 58.833 40.909 31.13 20.32 34.07 2.32
2806 2993 3.579586 TGCTGAAAGAGAATGGCCATTTT 59.420 39.130 31.13 26.05 34.07 1.82
2807 2994 4.179298 GCTGAAAGAGAATGGCCATTTTC 58.821 43.478 32.02 32.02 34.07 2.29
2808 2995 4.752146 CTGAAAGAGAATGGCCATTTTCC 58.248 43.478 34.07 23.58 33.76 3.13
2820 3015 5.233988 TGGCCATTTTCCTTTTTGTAATCG 58.766 37.500 0.00 0.00 0.00 3.34
2831 3026 8.897872 TCCTTTTTGTAATCGAGTAGAAACTT 57.102 30.769 13.85 0.00 35.56 2.66
2838 3033 7.827701 TGTAATCGAGTAGAAACTTCATCAGT 58.172 34.615 0.00 0.00 35.56 3.41
2878 3079 3.213206 AGAGTTGATTGTGCTGTTCCA 57.787 42.857 0.00 0.00 0.00 3.53
2892 3093 6.939730 TGTGCTGTTCCATTAATTCTTCTGTA 59.060 34.615 0.00 0.00 0.00 2.74
2938 3157 4.613944 TGGTTGTAGTGACTTGTAAGACG 58.386 43.478 0.00 0.00 0.00 4.18
2939 3158 3.985925 GGTTGTAGTGACTTGTAAGACGG 59.014 47.826 0.00 0.00 0.00 4.79
2940 3159 4.261741 GGTTGTAGTGACTTGTAAGACGGA 60.262 45.833 0.00 0.00 0.00 4.69
2942 3161 5.518848 TGTAGTGACTTGTAAGACGGAAA 57.481 39.130 0.00 0.00 0.00 3.13
2943 3162 5.904941 TGTAGTGACTTGTAAGACGGAAAA 58.095 37.500 0.00 0.00 0.00 2.29
2944 3163 6.518493 TGTAGTGACTTGTAAGACGGAAAAT 58.482 36.000 0.00 0.00 0.00 1.82
2945 3164 7.660112 TGTAGTGACTTGTAAGACGGAAAATA 58.340 34.615 0.00 0.00 0.00 1.40
2946 3165 7.596248 TGTAGTGACTTGTAAGACGGAAAATAC 59.404 37.037 0.00 0.00 0.00 1.89
2947 3166 6.518493 AGTGACTTGTAAGACGGAAAATACA 58.482 36.000 0.00 0.00 0.00 2.29
2948 3167 6.423001 AGTGACTTGTAAGACGGAAAATACAC 59.577 38.462 0.00 0.00 0.00 2.90
2949 3168 6.201425 GTGACTTGTAAGACGGAAAATACACA 59.799 38.462 0.00 0.00 0.00 3.72
2950 3169 6.422701 TGACTTGTAAGACGGAAAATACACAG 59.577 38.462 0.00 0.00 0.00 3.66
2951 3170 5.699458 ACTTGTAAGACGGAAAATACACAGG 59.301 40.000 0.00 0.00 0.00 4.00
2952 3171 5.471556 TGTAAGACGGAAAATACACAGGA 57.528 39.130 0.00 0.00 0.00 3.86
2953 3172 5.475719 TGTAAGACGGAAAATACACAGGAG 58.524 41.667 0.00 0.00 0.00 3.69
2954 3173 2.973945 AGACGGAAAATACACAGGAGC 58.026 47.619 0.00 0.00 0.00 4.70
2955 3174 2.567615 AGACGGAAAATACACAGGAGCT 59.432 45.455 0.00 0.00 0.00 4.09
2956 3175 2.930682 GACGGAAAATACACAGGAGCTC 59.069 50.000 4.71 4.71 0.00 4.09
2957 3176 2.280628 CGGAAAATACACAGGAGCTCC 58.719 52.381 26.22 26.22 0.00 4.70
2969 3188 3.325753 AGCTCCTGGGTGCTCCAC 61.326 66.667 10.00 0.00 40.37 4.02
3032 3251 4.955811 AAAAACCTGAAATCTTGACCCC 57.044 40.909 0.00 0.00 0.00 4.95
3033 3252 3.611025 AAACCTGAAATCTTGACCCCA 57.389 42.857 0.00 0.00 0.00 4.96
3034 3253 3.833559 AACCTGAAATCTTGACCCCAT 57.166 42.857 0.00 0.00 0.00 4.00
3035 3254 3.091633 ACCTGAAATCTTGACCCCATG 57.908 47.619 0.00 0.00 0.00 3.66
3036 3255 2.649312 ACCTGAAATCTTGACCCCATGA 59.351 45.455 0.00 0.00 0.00 3.07
3061 3280 3.118811 TGGCTTGCTAAGTTTGCTTGTTT 60.119 39.130 10.60 0.00 36.22 2.83
3092 3313 4.929211 GTGGAATTTGTGCATAGGAAAACC 59.071 41.667 0.00 0.00 0.00 3.27
3093 3314 4.837860 TGGAATTTGTGCATAGGAAAACCT 59.162 37.500 0.00 0.00 0.00 3.50
3096 3317 5.806654 ATTTGTGCATAGGAAAACCTTGT 57.193 34.783 0.00 0.00 0.00 3.16
3151 3372 2.440539 CAGTCCGTCTGTAGCAAGTT 57.559 50.000 0.00 0.00 39.17 2.66
3152 3373 2.755650 CAGTCCGTCTGTAGCAAGTTT 58.244 47.619 0.00 0.00 39.17 2.66
3153 3374 3.131396 CAGTCCGTCTGTAGCAAGTTTT 58.869 45.455 0.00 0.00 39.17 2.43
3154 3375 3.184581 CAGTCCGTCTGTAGCAAGTTTTC 59.815 47.826 0.00 0.00 39.17 2.29
3155 3376 2.479275 GTCCGTCTGTAGCAAGTTTTCC 59.521 50.000 0.00 0.00 0.00 3.13
3156 3377 2.103432 TCCGTCTGTAGCAAGTTTTCCA 59.897 45.455 0.00 0.00 0.00 3.53
3157 3378 3.074412 CCGTCTGTAGCAAGTTTTCCAT 58.926 45.455 0.00 0.00 0.00 3.41
3158 3379 3.502211 CCGTCTGTAGCAAGTTTTCCATT 59.498 43.478 0.00 0.00 0.00 3.16
3159 3380 4.466828 CGTCTGTAGCAAGTTTTCCATTG 58.533 43.478 0.00 0.00 0.00 2.82
3160 3381 4.613622 CGTCTGTAGCAAGTTTTCCATTGG 60.614 45.833 0.00 0.00 0.00 3.16
3161 3382 3.255642 TCTGTAGCAAGTTTTCCATTGGC 59.744 43.478 0.00 0.00 0.00 4.52
3162 3383 2.298729 TGTAGCAAGTTTTCCATTGGCC 59.701 45.455 0.00 0.00 0.00 5.36
3163 3384 1.422531 AGCAAGTTTTCCATTGGCCA 58.577 45.000 0.00 0.00 0.00 5.36
3164 3385 1.980036 AGCAAGTTTTCCATTGGCCAT 59.020 42.857 6.09 0.00 0.00 4.40
3165 3386 2.027837 AGCAAGTTTTCCATTGGCCATC 60.028 45.455 6.09 0.00 0.00 3.51
3166 3387 2.027837 GCAAGTTTTCCATTGGCCATCT 60.028 45.455 6.09 0.00 0.00 2.90
3167 3388 3.557686 GCAAGTTTTCCATTGGCCATCTT 60.558 43.478 6.09 0.00 0.00 2.40
3168 3389 4.248058 CAAGTTTTCCATTGGCCATCTTC 58.752 43.478 6.09 0.00 0.00 2.87
3169 3390 3.782992 AGTTTTCCATTGGCCATCTTCT 58.217 40.909 6.09 0.00 0.00 2.85
3170 3391 4.162651 AGTTTTCCATTGGCCATCTTCTT 58.837 39.130 6.09 0.00 0.00 2.52
3171 3392 4.594491 AGTTTTCCATTGGCCATCTTCTTT 59.406 37.500 6.09 0.00 0.00 2.52
3172 3393 4.806640 TTTCCATTGGCCATCTTCTTTC 57.193 40.909 6.09 0.00 0.00 2.62
3173 3394 2.738743 TCCATTGGCCATCTTCTTTCC 58.261 47.619 6.09 0.00 0.00 3.13
3174 3395 1.758862 CCATTGGCCATCTTCTTTCCC 59.241 52.381 6.09 0.00 0.00 3.97
3175 3396 2.625087 CCATTGGCCATCTTCTTTCCCT 60.625 50.000 6.09 0.00 0.00 4.20
3176 3397 3.373001 CCATTGGCCATCTTCTTTCCCTA 60.373 47.826 6.09 0.00 0.00 3.53
3177 3398 3.366052 TTGGCCATCTTCTTTCCCTAC 57.634 47.619 6.09 0.00 0.00 3.18
3178 3399 2.562296 TGGCCATCTTCTTTCCCTACT 58.438 47.619 0.00 0.00 0.00 2.57
3179 3400 2.239654 TGGCCATCTTCTTTCCCTACTG 59.760 50.000 0.00 0.00 0.00 2.74
3180 3401 2.422093 GGCCATCTTCTTTCCCTACTGG 60.422 54.545 0.00 0.00 0.00 4.00
3181 3402 2.505819 GCCATCTTCTTTCCCTACTGGA 59.494 50.000 0.00 0.00 43.18 3.86
3182 3403 3.682999 GCCATCTTCTTTCCCTACTGGAC 60.683 52.174 0.00 0.00 45.11 4.02
3183 3404 3.118223 CCATCTTCTTTCCCTACTGGACC 60.118 52.174 0.00 0.00 45.11 4.46
3222 3491 1.954382 CATTGGTCATCTGCCTCATGG 59.046 52.381 0.00 0.00 0.00 3.66
3276 3545 1.291877 GCCACAAGTACAGCAGACGG 61.292 60.000 0.00 0.00 0.00 4.79
3479 3749 1.154430 AAGTAACAGGAAAGGCCCCA 58.846 50.000 0.00 0.00 37.37 4.96
3497 3768 2.287915 CCCACTGCTCGTTATAATGCAC 59.712 50.000 0.00 0.00 0.00 4.57
3510 3781 7.378728 TCGTTATAATGCACGAGTTCTATGAAG 59.621 37.037 0.00 0.00 40.43 3.02
3512 3783 2.672961 TGCACGAGTTCTATGAAGGG 57.327 50.000 0.00 0.00 0.00 3.95
3578 3849 3.803082 CCGCCAGCATCGGTTGTG 61.803 66.667 3.55 0.00 41.85 3.33
3579 3850 3.049674 CGCCAGCATCGGTTGTGT 61.050 61.111 0.00 0.00 0.00 3.72
3580 3851 2.616330 CGCCAGCATCGGTTGTGTT 61.616 57.895 0.00 0.00 0.00 3.32
3581 3852 1.659794 GCCAGCATCGGTTGTGTTT 59.340 52.632 0.00 0.00 0.00 2.83
3654 3925 7.238486 TGTGGTTTAATGTATTCTTGGCATT 57.762 32.000 0.00 0.00 36.83 3.56
3738 4010 2.632996 TCTCCGTCTCCACAACATTTCT 59.367 45.455 0.00 0.00 0.00 2.52
3759 4034 1.377333 GCAAGTCACTGGGTAGGCC 60.377 63.158 0.00 0.00 0.00 5.19
3760 4035 1.842381 GCAAGTCACTGGGTAGGCCT 61.842 60.000 11.78 11.78 34.45 5.19
3854 4129 9.667107 TCTTGGACATAAAATTTCCTACTACTG 57.333 33.333 0.00 0.00 0.00 2.74
3870 4145 2.121963 TGGTTGGACTGGAGGCCT 60.122 61.111 3.86 3.86 0.00 5.19
3871 4146 2.352805 GGTTGGACTGGAGGCCTG 59.647 66.667 12.00 0.00 0.00 4.85
3876 4151 0.399091 TGGACTGGAGGCCTGATAGG 60.399 60.000 12.00 0.00 38.80 2.57
3894 4169 3.853355 AGGCTATTTCTGATGTGGAGG 57.147 47.619 0.00 0.00 0.00 4.30
3903 4178 6.806668 TTTCTGATGTGGAGGTGTATGATA 57.193 37.500 0.00 0.00 0.00 2.15
3916 4191 6.084738 AGGTGTATGATATCCTTTCCTGCTA 58.915 40.000 0.00 0.00 0.00 3.49
3917 4192 6.732862 AGGTGTATGATATCCTTTCCTGCTAT 59.267 38.462 0.00 0.00 0.00 2.97
3918 4193 7.901322 AGGTGTATGATATCCTTTCCTGCTATA 59.099 37.037 0.00 0.00 0.00 1.31
3919 4194 8.540388 GGTGTATGATATCCTTTCCTGCTATAA 58.460 37.037 0.00 0.00 0.00 0.98
3920 4195 9.944376 GTGTATGATATCCTTTCCTGCTATAAA 57.056 33.333 0.00 0.00 0.00 1.40
3942 4217 6.403866 AAAATACAAATCTCCTGTTGTGCA 57.596 33.333 0.00 0.00 38.40 4.57
3955 4230 3.382855 TGTTGTGCACAATCATTTGCTC 58.617 40.909 33.16 17.93 39.62 4.26
4097 4372 0.394192 CTCAACTGCTCACCTGTCCA 59.606 55.000 0.00 0.00 0.00 4.02
4100 4375 0.107456 AACTGCTCACCTGTCCACAG 59.893 55.000 0.00 0.00 43.40 3.66
4101 4376 1.050988 ACTGCTCACCTGTCCACAGT 61.051 55.000 5.99 0.00 42.27 3.55
4106 4381 2.548480 GCTCACCTGTCCACAGTTTAAC 59.452 50.000 5.99 0.00 42.27 2.01
4151 4426 2.616510 GGAAGATGACCCACTGACTTGG 60.617 54.545 0.00 0.00 36.26 3.61
4194 4469 7.186128 CGCTTTAATGTGCATTGTTCATAGTA 58.814 34.615 7.60 0.00 32.50 1.82
4258 4533 3.944250 ATGTCCTTTGGCCCTGGCG 62.944 63.158 0.00 0.00 43.06 5.69
4270 4550 3.770040 CTGGCGACCGATCCACCA 61.770 66.667 0.00 0.00 0.00 4.17
4317 4597 4.946157 ACCCAGCAGAAAGTAATCATGAAG 59.054 41.667 0.00 0.00 0.00 3.02
4336 4616 4.802876 AAGCGACACTTCTTTTCTTGAG 57.197 40.909 0.00 0.00 30.77 3.02
4440 4720 1.688772 TTAGCGCCCGTCTTCTATCT 58.311 50.000 2.29 0.00 0.00 1.98
4443 4723 0.595310 GCGCCCGTCTTCTATCTGTC 60.595 60.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.400213 TGAATGAACCGTCCCTTGCT 59.600 50.000 0.00 0.00 0.00 3.91
2 3 0.804989 CTGAATGAACCGTCCCTTGC 59.195 55.000 0.00 0.00 0.00 4.01
3 4 2.472695 TCTGAATGAACCGTCCCTTG 57.527 50.000 0.00 0.00 0.00 3.61
4 5 2.571653 TGATCTGAATGAACCGTCCCTT 59.428 45.455 0.00 0.00 0.00 3.95
5 6 2.093447 GTGATCTGAATGAACCGTCCCT 60.093 50.000 0.00 0.00 0.00 4.20
6 7 2.280628 GTGATCTGAATGAACCGTCCC 58.719 52.381 0.00 0.00 0.00 4.46
7 8 2.280628 GGTGATCTGAATGAACCGTCC 58.719 52.381 0.00 0.00 0.00 4.79
8 9 2.093447 AGGGTGATCTGAATGAACCGTC 60.093 50.000 0.00 0.00 0.00 4.79
9 10 1.909302 AGGGTGATCTGAATGAACCGT 59.091 47.619 0.00 0.00 0.00 4.83
10 11 2.093500 TGAGGGTGATCTGAATGAACCG 60.093 50.000 0.00 0.00 0.00 4.44
11 12 3.634397 TGAGGGTGATCTGAATGAACC 57.366 47.619 0.00 0.00 0.00 3.62
12 13 3.691609 GGTTGAGGGTGATCTGAATGAAC 59.308 47.826 0.00 0.00 0.00 3.18
13 14 3.330405 TGGTTGAGGGTGATCTGAATGAA 59.670 43.478 0.00 0.00 0.00 2.57
14 15 2.912295 TGGTTGAGGGTGATCTGAATGA 59.088 45.455 0.00 0.00 0.00 2.57
15 16 3.012518 GTGGTTGAGGGTGATCTGAATG 58.987 50.000 0.00 0.00 0.00 2.67
16 17 2.644299 TGTGGTTGAGGGTGATCTGAAT 59.356 45.455 0.00 0.00 0.00 2.57
17 18 2.054021 TGTGGTTGAGGGTGATCTGAA 58.946 47.619 0.00 0.00 0.00 3.02
18 19 1.347707 GTGTGGTTGAGGGTGATCTGA 59.652 52.381 0.00 0.00 0.00 3.27
19 20 1.072173 TGTGTGGTTGAGGGTGATCTG 59.928 52.381 0.00 0.00 0.00 2.90
20 21 1.434188 TGTGTGGTTGAGGGTGATCT 58.566 50.000 0.00 0.00 0.00 2.75
21 22 2.154462 CTTGTGTGGTTGAGGGTGATC 58.846 52.381 0.00 0.00 0.00 2.92
22 23 1.819305 GCTTGTGTGGTTGAGGGTGAT 60.819 52.381 0.00 0.00 0.00 3.06
23 24 0.465460 GCTTGTGTGGTTGAGGGTGA 60.465 55.000 0.00 0.00 0.00 4.02
24 25 0.466189 AGCTTGTGTGGTTGAGGGTG 60.466 55.000 0.00 0.00 0.00 4.61
25 26 0.179018 GAGCTTGTGTGGTTGAGGGT 60.179 55.000 0.00 0.00 0.00 4.34
26 27 0.179020 TGAGCTTGTGTGGTTGAGGG 60.179 55.000 0.00 0.00 0.00 4.30
27 28 0.947244 GTGAGCTTGTGTGGTTGAGG 59.053 55.000 0.00 0.00 0.00 3.86
28 29 0.947244 GGTGAGCTTGTGTGGTTGAG 59.053 55.000 0.00 0.00 0.00 3.02
29 30 0.813610 CGGTGAGCTTGTGTGGTTGA 60.814 55.000 0.00 0.00 0.00 3.18
30 31 0.813610 TCGGTGAGCTTGTGTGGTTG 60.814 55.000 0.00 0.00 0.00 3.77
31 32 0.532862 CTCGGTGAGCTTGTGTGGTT 60.533 55.000 0.00 0.00 0.00 3.67
32 33 1.069765 CTCGGTGAGCTTGTGTGGT 59.930 57.895 0.00 0.00 0.00 4.16
33 34 3.957260 CTCGGTGAGCTTGTGTGG 58.043 61.111 0.00 0.00 0.00 4.17
42 43 1.423395 GTGTTCTTGAGCTCGGTGAG 58.577 55.000 9.64 4.66 0.00 3.51
43 44 0.033504 GGTGTTCTTGAGCTCGGTGA 59.966 55.000 9.64 4.14 0.00 4.02
44 45 0.034059 AGGTGTTCTTGAGCTCGGTG 59.966 55.000 9.64 1.56 0.00 4.94
45 46 0.318762 GAGGTGTTCTTGAGCTCGGT 59.681 55.000 9.64 0.00 0.00 4.69
46 47 0.605589 AGAGGTGTTCTTGAGCTCGG 59.394 55.000 9.64 4.66 41.80 4.63
47 48 1.403514 GGAGAGGTGTTCTTGAGCTCG 60.404 57.143 9.64 0.00 41.80 5.03
48 49 1.899142 AGGAGAGGTGTTCTTGAGCTC 59.101 52.381 6.82 6.82 35.87 4.09
49 50 1.899142 GAGGAGAGGTGTTCTTGAGCT 59.101 52.381 0.00 0.00 35.87 4.09
50 51 1.620819 TGAGGAGAGGTGTTCTTGAGC 59.379 52.381 0.00 0.00 35.87 4.26
51 52 2.233431 CCTGAGGAGAGGTGTTCTTGAG 59.767 54.545 0.00 0.00 35.87 3.02
52 53 2.158310 TCCTGAGGAGAGGTGTTCTTGA 60.158 50.000 0.00 0.00 35.87 3.02
53 54 2.251818 TCCTGAGGAGAGGTGTTCTTG 58.748 52.381 0.00 0.00 35.87 3.02
54 55 2.704190 TCCTGAGGAGAGGTGTTCTT 57.296 50.000 0.00 0.00 35.87 2.52
67 68 4.283212 ACAAGAGAAGAAGAACCTCCTGAG 59.717 45.833 0.00 0.00 0.00 3.35
68 69 4.227197 ACAAGAGAAGAAGAACCTCCTGA 58.773 43.478 0.00 0.00 0.00 3.86
69 70 4.615588 ACAAGAGAAGAAGAACCTCCTG 57.384 45.455 0.00 0.00 0.00 3.86
70 71 4.528987 GGTACAAGAGAAGAAGAACCTCCT 59.471 45.833 0.00 0.00 0.00 3.69
71 72 4.528987 AGGTACAAGAGAAGAAGAACCTCC 59.471 45.833 0.00 0.00 30.31 4.30
72 73 5.011227 ACAGGTACAAGAGAAGAAGAACCTC 59.989 44.000 0.00 0.00 33.90 3.85
73 74 4.902448 ACAGGTACAAGAGAAGAAGAACCT 59.098 41.667 0.00 0.00 36.55 3.50
74 75 5.216614 ACAGGTACAAGAGAAGAAGAACC 57.783 43.478 0.00 0.00 0.00 3.62
75 76 6.281405 TGAACAGGTACAAGAGAAGAAGAAC 58.719 40.000 0.00 0.00 0.00 3.01
76 77 6.479972 TGAACAGGTACAAGAGAAGAAGAA 57.520 37.500 0.00 0.00 0.00 2.52
77 78 6.295349 GGATGAACAGGTACAAGAGAAGAAGA 60.295 42.308 0.00 0.00 0.00 2.87
78 79 5.872070 GGATGAACAGGTACAAGAGAAGAAG 59.128 44.000 0.00 0.00 0.00 2.85
79 80 5.280011 GGGATGAACAGGTACAAGAGAAGAA 60.280 44.000 0.00 0.00 0.00 2.52
80 81 4.223032 GGGATGAACAGGTACAAGAGAAGA 59.777 45.833 0.00 0.00 0.00 2.87
81 82 4.508662 GGGATGAACAGGTACAAGAGAAG 58.491 47.826 0.00 0.00 0.00 2.85
82 83 3.263425 GGGGATGAACAGGTACAAGAGAA 59.737 47.826 0.00 0.00 0.00 2.87
83 84 2.838202 GGGGATGAACAGGTACAAGAGA 59.162 50.000 0.00 0.00 0.00 3.10
84 85 2.571653 TGGGGATGAACAGGTACAAGAG 59.428 50.000 0.00 0.00 0.00 2.85
85 86 2.571653 CTGGGGATGAACAGGTACAAGA 59.428 50.000 0.00 0.00 0.00 3.02
86 87 2.941415 GCTGGGGATGAACAGGTACAAG 60.941 54.545 0.00 0.00 35.30 3.16
87 88 1.004277 GCTGGGGATGAACAGGTACAA 59.996 52.381 0.00 0.00 35.30 2.41
88 89 0.618458 GCTGGGGATGAACAGGTACA 59.382 55.000 0.00 0.00 35.30 2.90
89 90 0.107165 GGCTGGGGATGAACAGGTAC 60.107 60.000 0.00 0.00 35.30 3.34
90 91 0.253160 AGGCTGGGGATGAACAGGTA 60.253 55.000 0.00 0.00 35.30 3.08
91 92 0.253160 TAGGCTGGGGATGAACAGGT 60.253 55.000 0.00 0.00 35.30 4.00
92 93 0.181350 GTAGGCTGGGGATGAACAGG 59.819 60.000 0.00 0.00 35.30 4.00
93 94 0.911769 TGTAGGCTGGGGATGAACAG 59.088 55.000 0.00 0.00 37.76 3.16
94 95 1.281867 CTTGTAGGCTGGGGATGAACA 59.718 52.381 0.00 0.00 0.00 3.18
95 96 1.408822 CCTTGTAGGCTGGGGATGAAC 60.409 57.143 0.00 0.00 0.00 3.18
96 97 0.918983 CCTTGTAGGCTGGGGATGAA 59.081 55.000 0.00 0.00 0.00 2.57
97 98 2.620234 CCTTGTAGGCTGGGGATGA 58.380 57.895 0.00 0.00 0.00 2.92
107 108 1.271871 TGTGGTGGATTGCCTTGTAGG 60.272 52.381 0.00 0.00 38.80 3.18
108 109 1.812571 GTGTGGTGGATTGCCTTGTAG 59.187 52.381 0.00 0.00 34.31 2.74
109 110 1.546773 GGTGTGGTGGATTGCCTTGTA 60.547 52.381 0.00 0.00 34.31 2.41
110 111 0.827507 GGTGTGGTGGATTGCCTTGT 60.828 55.000 0.00 0.00 34.31 3.16
111 112 1.865788 CGGTGTGGTGGATTGCCTTG 61.866 60.000 0.00 0.00 34.31 3.61
112 113 1.603455 CGGTGTGGTGGATTGCCTT 60.603 57.895 0.00 0.00 34.31 4.35
113 114 2.034066 CGGTGTGGTGGATTGCCT 59.966 61.111 0.00 0.00 34.31 4.75
114 115 3.747976 GCGGTGTGGTGGATTGCC 61.748 66.667 0.00 0.00 0.00 4.52
115 116 2.983030 TGCGGTGTGGTGGATTGC 60.983 61.111 0.00 0.00 0.00 3.56
116 117 1.600636 AGTGCGGTGTGGTGGATTG 60.601 57.895 0.00 0.00 0.00 2.67
117 118 1.600636 CAGTGCGGTGTGGTGGATT 60.601 57.895 0.00 0.00 0.00 3.01
118 119 2.032528 CAGTGCGGTGTGGTGGAT 59.967 61.111 0.00 0.00 0.00 3.41
119 120 4.248842 CCAGTGCGGTGTGGTGGA 62.249 66.667 0.00 0.00 0.00 4.02
120 121 4.248842 TCCAGTGCGGTGTGGTGG 62.249 66.667 0.00 0.00 35.14 4.61
121 122 2.094757 TACTCCAGTGCGGTGTGGTG 62.095 60.000 0.00 0.00 41.62 4.17
122 123 1.816863 CTACTCCAGTGCGGTGTGGT 61.817 60.000 0.00 0.00 41.62 4.16
123 124 1.079819 CTACTCCAGTGCGGTGTGG 60.080 63.158 0.00 0.00 41.62 4.17
124 125 1.079819 CCTACTCCAGTGCGGTGTG 60.080 63.158 0.00 0.00 41.62 3.82
125 126 2.283529 CCCTACTCCAGTGCGGTGT 61.284 63.158 0.00 0.00 43.87 4.16
126 127 0.968901 TACCCTACTCCAGTGCGGTG 60.969 60.000 8.95 0.00 34.16 4.94
127 128 0.032416 ATACCCTACTCCAGTGCGGT 60.032 55.000 5.24 5.24 35.68 5.68
128 129 1.120530 AATACCCTACTCCAGTGCGG 58.879 55.000 0.00 0.00 0.00 5.69
129 130 2.691526 TGTAATACCCTACTCCAGTGCG 59.308 50.000 0.00 0.00 0.00 5.34
130 131 3.181468 GGTGTAATACCCTACTCCAGTGC 60.181 52.174 0.00 0.00 44.15 4.40
131 132 4.667519 GGTGTAATACCCTACTCCAGTG 57.332 50.000 0.00 0.00 44.15 3.66
158 159 0.542805 TTATACTGGTTCGGGCCACC 59.457 55.000 4.39 4.00 34.36 4.61
159 160 2.011947 GTTTATACTGGTTCGGGCCAC 58.988 52.381 4.39 0.00 34.36 5.01
160 161 1.065272 GGTTTATACTGGTTCGGGCCA 60.065 52.381 4.39 0.00 36.97 5.36
161 162 1.671979 GGTTTATACTGGTTCGGGCC 58.328 55.000 0.00 0.00 0.00 5.80
162 163 1.211212 AGGGTTTATACTGGTTCGGGC 59.789 52.381 0.00 0.00 0.00 6.13
163 164 3.275999 CAAGGGTTTATACTGGTTCGGG 58.724 50.000 0.00 0.00 0.00 5.14
164 165 3.687698 CACAAGGGTTTATACTGGTTCGG 59.312 47.826 0.00 0.00 0.00 4.30
165 166 4.320870 ACACAAGGGTTTATACTGGTTCG 58.679 43.478 0.00 0.00 0.00 3.95
166 167 4.698780 GGACACAAGGGTTTATACTGGTTC 59.301 45.833 0.00 0.00 0.00 3.62
167 168 4.507869 GGGACACAAGGGTTTATACTGGTT 60.508 45.833 0.00 0.00 0.00 3.67
168 169 3.009805 GGGACACAAGGGTTTATACTGGT 59.990 47.826 0.00 0.00 0.00 4.00
169 170 3.617284 GGGACACAAGGGTTTATACTGG 58.383 50.000 0.00 0.00 0.00 4.00
170 171 3.265995 AGGGGACACAAGGGTTTATACTG 59.734 47.826 0.00 0.00 0.00 2.74
171 172 3.538387 AGGGGACACAAGGGTTTATACT 58.462 45.455 0.00 0.00 0.00 2.12
172 173 5.641789 ATAGGGGACACAAGGGTTTATAC 57.358 43.478 0.00 0.00 0.00 1.47
173 174 5.974370 AGAATAGGGGACACAAGGGTTTATA 59.026 40.000 0.00 0.00 0.00 0.98
174 175 4.794067 AGAATAGGGGACACAAGGGTTTAT 59.206 41.667 0.00 0.00 0.00 1.40
175 176 4.180723 AGAATAGGGGACACAAGGGTTTA 58.819 43.478 0.00 0.00 0.00 2.01
176 177 2.993863 AGAATAGGGGACACAAGGGTTT 59.006 45.455 0.00 0.00 0.00 3.27
177 178 2.644151 AGAATAGGGGACACAAGGGTT 58.356 47.619 0.00 0.00 0.00 4.11
178 179 2.361085 AGAATAGGGGACACAAGGGT 57.639 50.000 0.00 0.00 0.00 4.34
179 180 2.420129 CGAAGAATAGGGGACACAAGGG 60.420 54.545 0.00 0.00 0.00 3.95
180 181 2.500098 TCGAAGAATAGGGGACACAAGG 59.500 50.000 0.00 0.00 0.00 3.61
181 182 3.195825 ACTCGAAGAATAGGGGACACAAG 59.804 47.826 0.00 0.00 34.09 3.16
182 183 3.170717 ACTCGAAGAATAGGGGACACAA 58.829 45.455 0.00 0.00 34.09 3.33
183 184 2.816411 ACTCGAAGAATAGGGGACACA 58.184 47.619 0.00 0.00 34.09 3.72
184 185 3.734293 CGAACTCGAAGAATAGGGGACAC 60.734 52.174 0.00 0.00 43.02 3.67
185 186 2.426024 CGAACTCGAAGAATAGGGGACA 59.574 50.000 0.00 0.00 43.02 4.02
186 187 2.686915 TCGAACTCGAAGAATAGGGGAC 59.313 50.000 0.00 0.00 46.30 4.46
187 188 3.008835 TCGAACTCGAAGAATAGGGGA 57.991 47.619 0.00 0.00 46.30 4.81
199 200 3.234041 CTCAGCGCGTCGAACTCG 61.234 66.667 8.43 0.00 41.45 4.18
200 201 3.537297 GCTCAGCGCGTCGAACTC 61.537 66.667 8.43 0.00 0.00 3.01
201 202 3.559657 AAGCTCAGCGCGTCGAACT 62.560 57.895 8.43 2.22 45.59 3.01
202 203 2.658707 AAAGCTCAGCGCGTCGAAC 61.659 57.895 8.43 0.00 45.59 3.95
203 204 2.355837 AAAGCTCAGCGCGTCGAA 60.356 55.556 8.43 0.00 45.59 3.71
204 205 3.105782 CAAAGCTCAGCGCGTCGA 61.106 61.111 8.43 3.39 45.59 4.20
205 206 3.064248 CTCAAAGCTCAGCGCGTCG 62.064 63.158 8.43 0.00 45.59 5.12
206 207 1.080995 ATCTCAAAGCTCAGCGCGTC 61.081 55.000 8.43 0.00 45.59 5.19
207 208 1.079543 ATCTCAAAGCTCAGCGCGT 60.080 52.632 8.43 0.00 45.59 6.01
208 209 1.635281 GATCTCAAAGCTCAGCGCG 59.365 57.895 0.00 0.00 45.59 6.86
209 210 1.080995 ACGATCTCAAAGCTCAGCGC 61.081 55.000 0.00 0.00 39.57 5.92
210 211 0.644331 CACGATCTCAAAGCTCAGCG 59.356 55.000 0.00 0.00 0.00 5.18
211 212 1.005340 CCACGATCTCAAAGCTCAGC 58.995 55.000 0.00 0.00 0.00 4.26
212 213 1.005340 GCCACGATCTCAAAGCTCAG 58.995 55.000 0.00 0.00 0.00 3.35
213 214 0.737367 CGCCACGATCTCAAAGCTCA 60.737 55.000 0.00 0.00 0.00 4.26
214 215 0.458543 TCGCCACGATCTCAAAGCTC 60.459 55.000 0.00 0.00 0.00 4.09
215 216 0.459237 CTCGCCACGATCTCAAAGCT 60.459 55.000 0.00 0.00 34.61 3.74
216 217 0.737715 ACTCGCCACGATCTCAAAGC 60.738 55.000 0.00 0.00 34.61 3.51
217 218 0.994995 CACTCGCCACGATCTCAAAG 59.005 55.000 0.00 0.00 34.61 2.77
218 219 0.317160 ACACTCGCCACGATCTCAAA 59.683 50.000 0.00 0.00 34.61 2.69
219 220 0.388520 CACACTCGCCACGATCTCAA 60.389 55.000 0.00 0.00 34.61 3.02
220 221 1.212751 CACACTCGCCACGATCTCA 59.787 57.895 0.00 0.00 34.61 3.27
221 222 1.073216 CACACACTCGCCACGATCTC 61.073 60.000 0.00 0.00 34.61 2.75
222 223 1.080501 CACACACTCGCCACGATCT 60.081 57.895 0.00 0.00 34.61 2.75
223 224 1.073216 CTCACACACTCGCCACGATC 61.073 60.000 0.00 0.00 34.61 3.69
224 225 1.080501 CTCACACACTCGCCACGAT 60.081 57.895 0.00 0.00 34.61 3.73
225 226 2.335011 CTCACACACTCGCCACGA 59.665 61.111 0.00 0.00 0.00 4.35
226 227 2.472232 TAGCTCACACACTCGCCACG 62.472 60.000 0.00 0.00 0.00 4.94
227 228 0.734253 CTAGCTCACACACTCGCCAC 60.734 60.000 0.00 0.00 0.00 5.01
228 229 1.586541 CTAGCTCACACACTCGCCA 59.413 57.895 0.00 0.00 0.00 5.69
229 230 1.153745 CCTAGCTCACACACTCGCC 60.154 63.158 0.00 0.00 0.00 5.54
230 231 1.153745 CCCTAGCTCACACACTCGC 60.154 63.158 0.00 0.00 0.00 5.03
231 232 0.965866 TCCCCTAGCTCACACACTCG 60.966 60.000 0.00 0.00 0.00 4.18
232 233 0.820871 CTCCCCTAGCTCACACACTC 59.179 60.000 0.00 0.00 0.00 3.51
233 234 0.616111 CCTCCCCTAGCTCACACACT 60.616 60.000 0.00 0.00 0.00 3.55
234 235 1.617947 CCCTCCCCTAGCTCACACAC 61.618 65.000 0.00 0.00 0.00 3.82
235 236 1.306141 CCCTCCCCTAGCTCACACA 60.306 63.158 0.00 0.00 0.00 3.72
236 237 1.001760 TCCCTCCCCTAGCTCACAC 59.998 63.158 0.00 0.00 0.00 3.82
237 238 1.221909 TCTCCCTCCCCTAGCTCACA 61.222 60.000 0.00 0.00 0.00 3.58
238 239 0.469144 CTCTCCCTCCCCTAGCTCAC 60.469 65.000 0.00 0.00 0.00 3.51
239 240 0.627768 TCTCTCCCTCCCCTAGCTCA 60.628 60.000 0.00 0.00 0.00 4.26
240 241 0.783850 ATCTCTCCCTCCCCTAGCTC 59.216 60.000 0.00 0.00 0.00 4.09
241 242 0.783850 GATCTCTCCCTCCCCTAGCT 59.216 60.000 0.00 0.00 0.00 3.32
242 243 0.783850 AGATCTCTCCCTCCCCTAGC 59.216 60.000 0.00 0.00 0.00 3.42
243 244 2.554344 CGAAGATCTCTCCCTCCCCTAG 60.554 59.091 0.00 0.00 0.00 3.02
244 245 1.425831 CGAAGATCTCTCCCTCCCCTA 59.574 57.143 0.00 0.00 0.00 3.53
245 246 0.187361 CGAAGATCTCTCCCTCCCCT 59.813 60.000 0.00 0.00 0.00 4.79
246 247 0.105913 ACGAAGATCTCTCCCTCCCC 60.106 60.000 0.00 0.00 0.00 4.81
247 248 1.036707 CACGAAGATCTCTCCCTCCC 58.963 60.000 0.00 0.00 0.00 4.30
248 249 0.387565 GCACGAAGATCTCTCCCTCC 59.612 60.000 0.00 0.00 0.00 4.30
249 250 0.030101 CGCACGAAGATCTCTCCCTC 59.970 60.000 0.00 0.00 0.00 4.30
250 251 2.010582 GCGCACGAAGATCTCTCCCT 62.011 60.000 0.30 0.00 0.00 4.20
251 252 1.590259 GCGCACGAAGATCTCTCCC 60.590 63.158 0.30 0.00 0.00 4.30
252 253 1.139734 TGCGCACGAAGATCTCTCC 59.860 57.895 5.66 0.00 0.00 3.71
253 254 1.142778 GGTGCGCACGAAGATCTCTC 61.143 60.000 32.35 12.11 0.00 3.20
254 255 1.153745 GGTGCGCACGAAGATCTCT 60.154 57.895 32.35 0.00 0.00 3.10
255 256 2.167861 GGGTGCGCACGAAGATCTC 61.168 63.158 32.35 16.60 0.00 2.75
256 257 2.125512 GGGTGCGCACGAAGATCT 60.126 61.111 32.35 0.00 0.00 2.75
257 258 3.195698 GGGGTGCGCACGAAGATC 61.196 66.667 32.35 18.05 0.00 2.75
258 259 3.958147 CTGGGGTGCGCACGAAGAT 62.958 63.158 32.35 0.00 0.00 2.40
259 260 4.680237 CTGGGGTGCGCACGAAGA 62.680 66.667 32.35 15.93 0.00 2.87
260 261 4.988598 ACTGGGGTGCGCACGAAG 62.989 66.667 32.35 28.23 0.00 3.79
264 265 3.660111 GAACACTGGGGTGCGCAC 61.660 66.667 32.15 32.15 46.57 5.34
266 267 4.980805 TCGAACACTGGGGTGCGC 62.981 66.667 0.00 0.00 46.57 6.09
267 268 2.280524 TTCGAACACTGGGGTGCG 60.281 61.111 0.00 0.00 46.57 5.34
268 269 2.258726 GGTTCGAACACTGGGGTGC 61.259 63.158 28.24 5.21 46.57 5.01
270 271 1.426751 TAAGGTTCGAACACTGGGGT 58.573 50.000 28.24 11.07 0.00 4.95
271 272 2.423577 CTTAAGGTTCGAACACTGGGG 58.576 52.381 28.24 10.57 0.00 4.96
272 273 2.423577 CCTTAAGGTTCGAACACTGGG 58.576 52.381 28.24 18.20 0.00 4.45
273 274 2.423577 CCCTTAAGGTTCGAACACTGG 58.576 52.381 28.24 20.01 0.00 4.00
285 286 1.271379 GTTCCCGCAAAACCCTTAAGG 59.729 52.381 15.14 15.14 43.78 2.69
286 287 1.271379 GGTTCCCGCAAAACCCTTAAG 59.729 52.381 0.00 0.00 40.29 1.85
287 288 1.330234 GGTTCCCGCAAAACCCTTAA 58.670 50.000 1.36 0.00 40.29 1.85
288 289 3.039452 GGTTCCCGCAAAACCCTTA 57.961 52.632 1.36 0.00 40.29 2.69
289 290 3.865071 GGTTCCCGCAAAACCCTT 58.135 55.556 1.36 0.00 40.29 3.95
300 301 1.022982 GTGTCGGATTTCGGGTTCCC 61.023 60.000 0.00 0.00 39.77 3.97
301 302 1.022982 GGTGTCGGATTTCGGGTTCC 61.023 60.000 0.00 0.00 39.77 3.62
302 303 0.320946 TGGTGTCGGATTTCGGGTTC 60.321 55.000 0.00 0.00 39.77 3.62
303 304 0.326927 ATGGTGTCGGATTTCGGGTT 59.673 50.000 0.00 0.00 39.77 4.11
304 305 0.326927 AATGGTGTCGGATTTCGGGT 59.673 50.000 0.00 0.00 39.77 5.28
305 306 2.210116 CTAATGGTGTCGGATTTCGGG 58.790 52.381 0.00 0.00 39.77 5.14
306 307 2.901249 ACTAATGGTGTCGGATTTCGG 58.099 47.619 0.00 0.00 39.77 4.30
307 308 3.682858 ACAACTAATGGTGTCGGATTTCG 59.317 43.478 0.00 0.00 40.90 3.46
308 309 6.537301 TGATACAACTAATGGTGTCGGATTTC 59.463 38.462 0.00 0.00 0.00 2.17
309 310 6.315393 GTGATACAACTAATGGTGTCGGATTT 59.685 38.462 0.00 0.00 0.00 2.17
310 311 5.815740 GTGATACAACTAATGGTGTCGGATT 59.184 40.000 0.00 0.00 0.00 3.01
311 312 5.128827 AGTGATACAACTAATGGTGTCGGAT 59.871 40.000 0.00 0.00 0.00 4.18
312 313 4.464951 AGTGATACAACTAATGGTGTCGGA 59.535 41.667 0.00 0.00 0.00 4.55
313 314 4.755411 AGTGATACAACTAATGGTGTCGG 58.245 43.478 0.00 0.00 0.00 4.79
314 315 6.534059 CAAAGTGATACAACTAATGGTGTCG 58.466 40.000 0.00 0.00 0.00 4.35
315 316 6.314784 GCAAAGTGATACAACTAATGGTGTC 58.685 40.000 0.00 0.00 0.00 3.67
316 317 5.106712 CGCAAAGTGATACAACTAATGGTGT 60.107 40.000 0.00 0.00 0.00 4.16
317 318 5.106712 ACGCAAAGTGATACAACTAATGGTG 60.107 40.000 0.00 0.00 0.00 4.17
331 332 2.423892 TGCAAAACCTAACGCAAAGTGA 59.576 40.909 0.00 0.00 0.00 3.41
334 335 3.701241 TCTTGCAAAACCTAACGCAAAG 58.299 40.909 0.00 0.00 43.25 2.77
341 342 3.634910 GTGGGAACTCTTGCAAAACCTAA 59.365 43.478 0.00 0.00 0.00 2.69
372 373 1.749634 AGTGCGTGTAGTGGTAGATCC 59.250 52.381 0.00 0.00 0.00 3.36
443 444 2.200170 GAACCGTCCCAGCAATGCAC 62.200 60.000 8.35 0.00 0.00 4.57
452 453 3.961414 GGGCAAGGAACCGTCCCA 61.961 66.667 11.17 0.00 46.30 4.37
453 454 4.735358 GGGGCAAGGAACCGTCCC 62.735 72.222 8.71 8.71 46.30 4.46
458 459 1.674651 GAGAACGGGGCAAGGAACC 60.675 63.158 0.00 0.00 0.00 3.62
478 479 3.264845 GCCCCTTCCCTTGGGTCA 61.265 66.667 5.51 0.00 44.20 4.02
510 511 1.803943 CGGTCTCGTCAGGGAAGAG 59.196 63.158 3.25 3.25 39.00 2.85
551 552 0.747852 TATCGTGGGCGCAATAGACA 59.252 50.000 10.83 0.00 38.14 3.41
560 561 0.529992 GTCCCTTCTTATCGTGGGCG 60.530 60.000 0.00 0.00 39.49 6.13
581 582 2.062519 GACCGAAGCACTTGAAGTCTC 58.937 52.381 0.00 0.00 0.00 3.36
596 597 7.568349 TCCTAATACTAACTTCACTAGACCGA 58.432 38.462 0.00 0.00 0.00 4.69
626 627 5.189736 TGCTGATGGAGAGTACAACCTAAAT 59.810 40.000 0.00 0.00 0.00 1.40
630 631 2.540383 TGCTGATGGAGAGTACAACCT 58.460 47.619 0.00 0.00 0.00 3.50
644 645 0.037326 ACGATGACACCGTTGCTGAT 60.037 50.000 0.00 0.00 36.83 2.90
645 646 0.666274 GACGATGACACCGTTGCTGA 60.666 55.000 0.00 0.00 40.67 4.26
646 647 1.781555 GACGATGACACCGTTGCTG 59.218 57.895 0.00 0.00 40.67 4.41
647 648 1.733041 CGACGATGACACCGTTGCT 60.733 57.895 0.00 0.00 40.67 3.91
649 650 0.640262 CATCGACGATGACACCGTTG 59.360 55.000 29.63 2.86 42.09 4.10
650 651 0.242825 ACATCGACGATGACACCGTT 59.757 50.000 37.26 15.57 42.09 4.44
655 668 4.803613 CCTTATTTCACATCGACGATGACA 59.196 41.667 37.26 22.60 42.09 3.58
681 694 3.995077 ACCAGACTAGGATGGGGTATAGA 59.005 47.826 17.11 0.00 41.13 1.98
684 697 2.427889 CCACCAGACTAGGATGGGGTAT 60.428 54.545 17.11 0.00 38.40 2.73
685 698 1.062428 CCACCAGACTAGGATGGGGTA 60.062 57.143 17.11 0.00 38.40 3.69
694 707 2.736719 CGAAGATGCACCACCAGACTAG 60.737 54.545 0.00 0.00 0.00 2.57
699 712 1.935873 CATACGAAGATGCACCACCAG 59.064 52.381 0.00 0.00 0.00 4.00
720 733 0.321653 ACATTCTTCACACGCCTCCC 60.322 55.000 0.00 0.00 0.00 4.30
766 779 2.435059 GCGAGGAACTGGAGCCAC 60.435 66.667 0.00 0.00 41.55 5.01
775 788 3.498397 TGAGAAGTCAAAATGCGAGGAAC 59.502 43.478 0.00 0.00 0.00 3.62
1588 1622 0.606604 TTCACGTACTCTGGGAAGCC 59.393 55.000 0.00 0.00 0.00 4.35
1592 1626 2.873094 TCTCTTCACGTACTCTGGGA 57.127 50.000 0.00 0.00 0.00 4.37
1652 1688 9.543783 AATTAGAACCCTAGATTTTCGATACAC 57.456 33.333 0.00 0.00 0.00 2.90
1655 1691 8.711170 ACCAATTAGAACCCTAGATTTTCGATA 58.289 33.333 0.00 0.00 0.00 2.92
1656 1692 7.574607 ACCAATTAGAACCCTAGATTTTCGAT 58.425 34.615 0.00 0.00 0.00 3.59
1684 1732 6.180472 TGCTCTCTTAAATAAAACCAGAGGG 58.820 40.000 0.00 0.00 35.48 4.30
1685 1733 7.554118 TGATGCTCTCTTAAATAAAACCAGAGG 59.446 37.037 0.00 0.00 33.18 3.69
1687 1735 9.466497 AATGATGCTCTCTTAAATAAAACCAGA 57.534 29.630 0.00 0.00 0.00 3.86
1706 1759 8.613060 TCTAGTCATTGATTTCCTAATGATGC 57.387 34.615 0.00 0.00 43.03 3.91
1728 1781 9.383519 ACGAATTAGCAGAATCAATTTCTTCTA 57.616 29.630 0.00 0.00 42.15 2.10
1730 1783 9.988350 TTACGAATTAGCAGAATCAATTTCTTC 57.012 29.630 0.00 0.00 42.15 2.87
1737 1790 6.640518 ACCTCTTACGAATTAGCAGAATCAA 58.359 36.000 0.00 0.00 0.00 2.57
1740 1793 6.276847 CAGACCTCTTACGAATTAGCAGAAT 58.723 40.000 0.00 0.00 0.00 2.40
1741 1794 5.651530 CAGACCTCTTACGAATTAGCAGAA 58.348 41.667 0.00 0.00 0.00 3.02
1743 1796 3.799420 GCAGACCTCTTACGAATTAGCAG 59.201 47.826 0.00 0.00 0.00 4.24
1764 1818 3.058224 ACTTGGTGAAGTTGCGAATTAGC 60.058 43.478 3.27 3.27 39.56 3.09
1765 1819 4.452455 AGACTTGGTGAAGTTGCGAATTAG 59.548 41.667 0.00 0.00 42.80 1.73
1767 1821 3.214328 AGACTTGGTGAAGTTGCGAATT 58.786 40.909 0.00 0.00 42.80 2.17
1769 1823 2.158957 AGAGACTTGGTGAAGTTGCGAA 60.159 45.455 0.00 0.00 42.80 4.70
1772 1826 1.795286 CGAGAGACTTGGTGAAGTTGC 59.205 52.381 0.00 0.00 42.80 4.17
1773 1827 3.243569 ACTCGAGAGACTTGGTGAAGTTG 60.244 47.826 21.68 0.00 42.80 3.16
1774 1828 2.959707 ACTCGAGAGACTTGGTGAAGTT 59.040 45.455 21.68 0.00 42.80 2.66
1778 1836 4.119862 CAAAAACTCGAGAGACTTGGTGA 58.880 43.478 21.68 0.00 35.39 4.02
1779 1837 3.303395 GCAAAAACTCGAGAGACTTGGTG 60.303 47.826 21.68 5.96 35.39 4.17
1782 1840 4.271049 TGAAGCAAAAACTCGAGAGACTTG 59.729 41.667 21.68 16.26 35.39 3.16
1806 1864 8.000780 ACATTTCTATTCAGGAATAAACTGCC 57.999 34.615 3.57 0.00 35.94 4.85
1814 1872 6.837568 AGCATTGGACATTTCTATTCAGGAAT 59.162 34.615 0.00 0.00 29.18 3.01
1855 1913 8.907222 ATGCTGTCTTTCAATGGTAAATTTTT 57.093 26.923 0.00 0.00 0.00 1.94
1856 1914 8.776470 CAATGCTGTCTTTCAATGGTAAATTTT 58.224 29.630 0.00 0.00 0.00 1.82
1857 1915 8.149647 TCAATGCTGTCTTTCAATGGTAAATTT 58.850 29.630 0.00 0.00 0.00 1.82
1858 1916 7.669427 TCAATGCTGTCTTTCAATGGTAAATT 58.331 30.769 0.00 0.00 0.00 1.82
1860 1918 6.647334 TCAATGCTGTCTTTCAATGGTAAA 57.353 33.333 0.00 0.00 0.00 2.01
1862 1920 6.489700 TCTTTCAATGCTGTCTTTCAATGGTA 59.510 34.615 0.00 0.00 0.00 3.25
1863 1921 5.302568 TCTTTCAATGCTGTCTTTCAATGGT 59.697 36.000 0.00 0.00 0.00 3.55
1865 1923 6.210796 TGTCTTTCAATGCTGTCTTTCAATG 58.789 36.000 0.00 0.00 0.00 2.82
1866 1924 6.040166 ACTGTCTTTCAATGCTGTCTTTCAAT 59.960 34.615 0.00 0.00 0.00 2.57
1867 1925 5.357878 ACTGTCTTTCAATGCTGTCTTTCAA 59.642 36.000 0.00 0.00 0.00 2.69
1868 1926 4.883585 ACTGTCTTTCAATGCTGTCTTTCA 59.116 37.500 0.00 0.00 0.00 2.69
1869 1927 5.210715 CACTGTCTTTCAATGCTGTCTTTC 58.789 41.667 0.00 0.00 0.00 2.62
1870 1928 4.037208 CCACTGTCTTTCAATGCTGTCTTT 59.963 41.667 0.00 0.00 0.00 2.52
1871 1929 3.567164 CCACTGTCTTTCAATGCTGTCTT 59.433 43.478 0.00 0.00 0.00 3.01
1872 1930 3.144506 CCACTGTCTTTCAATGCTGTCT 58.855 45.455 0.00 0.00 0.00 3.41
1873 1931 2.227388 CCCACTGTCTTTCAATGCTGTC 59.773 50.000 0.00 0.00 0.00 3.51
1874 1932 2.158623 TCCCACTGTCTTTCAATGCTGT 60.159 45.455 0.00 0.00 0.00 4.40
1875 1933 2.486982 CTCCCACTGTCTTTCAATGCTG 59.513 50.000 0.00 0.00 0.00 4.41
1876 1934 2.373169 TCTCCCACTGTCTTTCAATGCT 59.627 45.455 0.00 0.00 0.00 3.79
1877 1935 2.746362 CTCTCCCACTGTCTTTCAATGC 59.254 50.000 0.00 0.00 0.00 3.56
1878 1936 3.999663 GTCTCTCCCACTGTCTTTCAATG 59.000 47.826 0.00 0.00 0.00 2.82
1879 1937 3.906846 AGTCTCTCCCACTGTCTTTCAAT 59.093 43.478 0.00 0.00 0.00 2.57
1880 1938 3.309296 AGTCTCTCCCACTGTCTTTCAA 58.691 45.455 0.00 0.00 0.00 2.69
1881 1939 2.894126 GAGTCTCTCCCACTGTCTTTCA 59.106 50.000 0.00 0.00 0.00 2.69
1882 1940 2.232696 GGAGTCTCTCCCACTGTCTTTC 59.767 54.545 4.60 0.00 44.36 2.62
1883 1941 2.252714 GGAGTCTCTCCCACTGTCTTT 58.747 52.381 4.60 0.00 44.36 2.52
1884 1942 1.931635 GGAGTCTCTCCCACTGTCTT 58.068 55.000 4.60 0.00 44.36 3.01
1885 1943 3.681909 GGAGTCTCTCCCACTGTCT 57.318 57.895 4.60 0.00 44.36 3.41
1894 1952 1.781786 TATGGCAGTGGGAGTCTCTC 58.218 55.000 0.00 0.00 0.00 3.20
1895 1953 2.485966 ATATGGCAGTGGGAGTCTCT 57.514 50.000 0.00 0.00 0.00 3.10
1896 1954 4.899352 AATATATGGCAGTGGGAGTCTC 57.101 45.455 0.00 0.00 0.00 3.36
1897 1955 5.407049 AGTAATATATGGCAGTGGGAGTCT 58.593 41.667 0.00 0.00 0.00 3.24
1898 1956 5.246203 TGAGTAATATATGGCAGTGGGAGTC 59.754 44.000 0.00 0.00 0.00 3.36
1899 1957 5.155161 TGAGTAATATATGGCAGTGGGAGT 58.845 41.667 0.00 0.00 0.00 3.85
1900 1958 5.337894 CCTGAGTAATATATGGCAGTGGGAG 60.338 48.000 0.00 0.00 0.00 4.30
1901 1959 4.532126 CCTGAGTAATATATGGCAGTGGGA 59.468 45.833 0.00 0.00 0.00 4.37
1902 1960 4.836825 CCTGAGTAATATATGGCAGTGGG 58.163 47.826 0.00 0.00 0.00 4.61
1903 1961 4.256920 GCCTGAGTAATATATGGCAGTGG 58.743 47.826 4.96 0.00 40.04 4.00
1904 1962 4.898320 TGCCTGAGTAATATATGGCAGTG 58.102 43.478 7.85 0.00 44.35 3.66
1908 1966 9.613428 TGTAATTATGCCTGAGTAATATATGGC 57.387 33.333 3.16 3.16 40.62 4.40
1913 1971 9.896645 CCAGATGTAATTATGCCTGAGTAATAT 57.103 33.333 10.58 0.00 0.00 1.28
1914 1972 9.100197 TCCAGATGTAATTATGCCTGAGTAATA 57.900 33.333 10.58 0.00 0.00 0.98
1915 1973 7.977818 TCCAGATGTAATTATGCCTGAGTAAT 58.022 34.615 10.58 0.00 0.00 1.89
1916 1974 7.373617 TCCAGATGTAATTATGCCTGAGTAA 57.626 36.000 10.58 0.00 0.00 2.24
1917 1975 6.994421 TCCAGATGTAATTATGCCTGAGTA 57.006 37.500 10.58 0.00 0.00 2.59
1918 1976 5.894298 TCCAGATGTAATTATGCCTGAGT 57.106 39.130 10.58 0.00 0.00 3.41
1919 1977 6.470278 TGATCCAGATGTAATTATGCCTGAG 58.530 40.000 10.58 4.25 0.00 3.35
1920 1978 6.438186 TGATCCAGATGTAATTATGCCTGA 57.562 37.500 10.58 0.00 0.00 3.86
1921 1979 6.095021 CCATGATCCAGATGTAATTATGCCTG 59.905 42.308 0.00 0.00 0.00 4.85
1922 1980 6.185511 CCATGATCCAGATGTAATTATGCCT 58.814 40.000 0.00 0.00 0.00 4.75
1923 1981 5.163581 GCCATGATCCAGATGTAATTATGCC 60.164 44.000 0.00 0.00 0.00 4.40
1924 1982 5.416639 TGCCATGATCCAGATGTAATTATGC 59.583 40.000 0.00 0.00 0.00 3.14
1925 1983 7.457024 TTGCCATGATCCAGATGTAATTATG 57.543 36.000 0.00 0.00 0.00 1.90
1926 1984 8.528643 CAATTGCCATGATCCAGATGTAATTAT 58.471 33.333 0.00 0.00 0.00 1.28
1927 1985 7.724951 TCAATTGCCATGATCCAGATGTAATTA 59.275 33.333 0.00 0.00 0.00 1.40
1928 1986 6.551975 TCAATTGCCATGATCCAGATGTAATT 59.448 34.615 0.00 0.00 0.00 1.40
1929 1987 6.072649 TCAATTGCCATGATCCAGATGTAAT 58.927 36.000 0.00 0.00 0.00 1.89
1930 1988 5.447757 TCAATTGCCATGATCCAGATGTAA 58.552 37.500 0.00 0.00 0.00 2.41
1931 1989 5.051409 TCAATTGCCATGATCCAGATGTA 57.949 39.130 0.00 0.00 0.00 2.29
1932 1990 3.905968 TCAATTGCCATGATCCAGATGT 58.094 40.909 0.00 0.00 0.00 3.06
1933 1991 5.393135 GCTATCAATTGCCATGATCCAGATG 60.393 44.000 0.00 0.00 38.44 2.90
1934 1992 4.705507 GCTATCAATTGCCATGATCCAGAT 59.294 41.667 0.00 0.00 38.44 2.90
1935 1993 4.077108 GCTATCAATTGCCATGATCCAGA 58.923 43.478 0.00 0.00 38.44 3.86
1936 1994 3.824443 TGCTATCAATTGCCATGATCCAG 59.176 43.478 0.00 0.00 38.44 3.86
1937 1995 3.824443 CTGCTATCAATTGCCATGATCCA 59.176 43.478 0.00 0.17 38.44 3.41
1938 1996 3.367087 GCTGCTATCAATTGCCATGATCC 60.367 47.826 0.00 0.00 38.44 3.36
1939 1997 3.254903 TGCTGCTATCAATTGCCATGATC 59.745 43.478 0.00 0.00 38.44 2.92
1940 1998 3.005472 GTGCTGCTATCAATTGCCATGAT 59.995 43.478 0.00 2.19 40.49 2.45
1941 1999 2.359848 GTGCTGCTATCAATTGCCATGA 59.640 45.455 0.00 0.00 0.00 3.07
1942 2000 2.361119 AGTGCTGCTATCAATTGCCATG 59.639 45.455 0.00 0.00 0.00 3.66
1943 2001 2.662866 AGTGCTGCTATCAATTGCCAT 58.337 42.857 0.00 0.00 0.00 4.40
1944 2002 2.133281 AGTGCTGCTATCAATTGCCA 57.867 45.000 0.00 0.00 0.00 4.92
1945 2003 3.184541 CAAAGTGCTGCTATCAATTGCC 58.815 45.455 0.00 0.00 0.00 4.52
1946 2004 3.184541 CCAAAGTGCTGCTATCAATTGC 58.815 45.455 0.00 0.00 0.00 3.56
1947 2005 4.445452 ACCAAAGTGCTGCTATCAATTG 57.555 40.909 0.00 0.00 0.00 2.32
1948 2006 6.183360 GGATTACCAAAGTGCTGCTATCAATT 60.183 38.462 0.00 0.00 35.97 2.32
1949 2007 5.300286 GGATTACCAAAGTGCTGCTATCAAT 59.700 40.000 0.00 0.00 35.97 2.57
1950 2008 4.640201 GGATTACCAAAGTGCTGCTATCAA 59.360 41.667 0.00 0.00 35.97 2.57
1951 2009 4.080356 AGGATTACCAAAGTGCTGCTATCA 60.080 41.667 0.00 0.00 38.94 2.15
1952 2010 4.455606 AGGATTACCAAAGTGCTGCTATC 58.544 43.478 0.00 0.00 38.94 2.08
1953 2011 4.510167 AGGATTACCAAAGTGCTGCTAT 57.490 40.909 0.00 0.00 38.94 2.97
1954 2012 4.141711 CCTAGGATTACCAAAGTGCTGCTA 60.142 45.833 1.05 0.00 38.94 3.49
1955 2013 2.887151 AGGATTACCAAAGTGCTGCT 57.113 45.000 0.00 0.00 38.94 4.24
1956 2014 2.945668 CCTAGGATTACCAAAGTGCTGC 59.054 50.000 1.05 0.00 38.94 5.25
1957 2015 4.222124 ACCTAGGATTACCAAAGTGCTG 57.778 45.455 17.98 0.00 38.94 4.41
1958 2016 4.929146 AACCTAGGATTACCAAAGTGCT 57.071 40.909 17.98 0.00 38.94 4.40
1959 2017 5.985911 TCTAACCTAGGATTACCAAAGTGC 58.014 41.667 17.98 0.00 38.94 4.40
1960 2018 7.621796 AGTTCTAACCTAGGATTACCAAAGTG 58.378 38.462 17.98 0.00 38.94 3.16
1961 2019 7.809880 AGTTCTAACCTAGGATTACCAAAGT 57.190 36.000 17.98 0.60 38.94 2.66
1962 2020 9.765795 CATAGTTCTAACCTAGGATTACCAAAG 57.234 37.037 17.98 0.00 38.94 2.77
1963 2021 9.275572 ACATAGTTCTAACCTAGGATTACCAAA 57.724 33.333 17.98 0.00 38.94 3.28
1964 2022 8.849543 ACATAGTTCTAACCTAGGATTACCAA 57.150 34.615 17.98 0.00 38.94 3.67
2092 2151 9.552114 CTCATCAACTCAACAATAATTCACTTC 57.448 33.333 0.00 0.00 0.00 3.01
2093 2152 9.288576 TCTCATCAACTCAACAATAATTCACTT 57.711 29.630 0.00 0.00 0.00 3.16
2095 2154 9.897744 TTTCTCATCAACTCAACAATAATTCAC 57.102 29.630 0.00 0.00 0.00 3.18
2111 2170 5.693104 ACGTAGTTTAACGCTTTCTCATCAA 59.307 36.000 0.00 0.00 46.71 2.57
2112 2171 5.118050 CACGTAGTTTAACGCTTTCTCATCA 59.882 40.000 0.00 0.00 46.71 3.07
2140 2199 5.815581 ACTCTATAGGACCATTTGCAACAA 58.184 37.500 0.00 0.00 0.00 2.83
2154 2213 5.480073 CCTCATCCTGGAAGAACTCTATAGG 59.520 48.000 0.00 0.00 34.07 2.57
2177 2237 4.877282 TGCAAAATAACACTAAGCCAACC 58.123 39.130 0.00 0.00 0.00 3.77
2262 2326 8.670135 CGGTAATACACACCTAAATTTTCATCA 58.330 33.333 0.00 0.00 33.62 3.07
2263 2327 8.126700 CCGGTAATACACACCTAAATTTTCATC 58.873 37.037 0.00 0.00 33.62 2.92
2264 2328 7.612633 ACCGGTAATACACACCTAAATTTTCAT 59.387 33.333 4.49 0.00 33.62 2.57
2307 2371 4.776435 AATTCCCCAATTGCCTTTATGG 57.224 40.909 0.00 0.00 39.35 2.74
2322 2386 7.914427 AATTCCCACTATTTTCCTAATTCCC 57.086 36.000 0.00 0.00 0.00 3.97
2329 2393 7.387265 AAAACCAAATTCCCACTATTTTCCT 57.613 32.000 0.00 0.00 0.00 3.36
2385 2462 5.919141 CGGAGTATAAGCGCAATTTAGTACT 59.081 40.000 11.47 7.69 0.00 2.73
2398 2475 7.541437 GTGAATATGGAGTTACGGAGTATAAGC 59.459 40.741 0.00 0.00 45.21 3.09
2409 2486 5.023533 TGCCTCTGTGAATATGGAGTTAC 57.976 43.478 0.00 0.00 0.00 2.50
2425 2502 6.016777 CAGACAATTCTTAAACAGTTGCCTCT 60.017 38.462 0.00 0.00 0.00 3.69
2440 2517 5.584649 TCACGAAAGAAACACAGACAATTCT 59.415 36.000 0.00 0.00 33.73 2.40
2468 2545 9.401058 CTTCCAACCTCATAGTTTTATTCTCAT 57.599 33.333 0.00 0.00 0.00 2.90
2487 2564 5.170748 CAATTCCAAGCATAACCTTCCAAC 58.829 41.667 0.00 0.00 0.00 3.77
2528 2605 5.946486 AGAAAACCAAAGGAAGAGTCAGAT 58.054 37.500 0.00 0.00 0.00 2.90
2529 2606 5.373812 AGAAAACCAAAGGAAGAGTCAGA 57.626 39.130 0.00 0.00 0.00 3.27
2632 2819 1.355381 TCTCTTGTTGTGCCATCCCAT 59.645 47.619 0.00 0.00 0.00 4.00
2680 2867 8.537858 TCATATAACATCTGATCCTCCTTCATG 58.462 37.037 0.00 0.00 0.00 3.07
2689 2876 9.512588 ACAAATTCCTCATATAACATCTGATCC 57.487 33.333 0.00 0.00 0.00 3.36
2746 2933 5.212532 AGCAAAGAAAATGTAATGTGCCA 57.787 34.783 0.00 0.00 0.00 4.92
2751 2938 7.967890 AAAAGGGAGCAAAGAAAATGTAATG 57.032 32.000 0.00 0.00 0.00 1.90
2754 2941 8.415950 TGATAAAAGGGAGCAAAGAAAATGTA 57.584 30.769 0.00 0.00 0.00 2.29
2755 2942 7.301868 TGATAAAAGGGAGCAAAGAAAATGT 57.698 32.000 0.00 0.00 0.00 2.71
2778 2965 5.163488 TGGCCATTCTCTTTCAGCAAATATG 60.163 40.000 0.00 0.00 0.00 1.78
2805 2992 8.897872 AGTTTCTACTCGATTACAAAAAGGAA 57.102 30.769 0.00 0.00 0.00 3.36
2806 2993 8.897872 AAGTTTCTACTCGATTACAAAAAGGA 57.102 30.769 0.00 0.00 31.99 3.36
2807 2994 8.770828 TGAAGTTTCTACTCGATTACAAAAAGG 58.229 33.333 0.00 0.00 31.99 3.11
2820 3015 7.913674 AAATCCACTGATGAAGTTTCTACTC 57.086 36.000 0.00 0.00 36.83 2.59
2831 3026 9.585369 TTTTGCCATATATAAATCCACTGATGA 57.415 29.630 0.00 0.00 0.00 2.92
2900 3101 1.251251 ACCAGACTGCAGGAATTTGC 58.749 50.000 19.93 0.00 44.33 3.68
2918 3119 4.863491 TCCGTCTTACAAGTCACTACAAC 58.137 43.478 0.00 0.00 0.00 3.32
2938 3157 3.636153 AGGAGCTCCTGTGTATTTTCC 57.364 47.619 34.74 2.68 46.55 3.13
3011 3230 4.294347 TGGGGTCAAGATTTCAGGTTTTT 58.706 39.130 0.00 0.00 0.00 1.94
3012 3231 3.922375 TGGGGTCAAGATTTCAGGTTTT 58.078 40.909 0.00 0.00 0.00 2.43
3013 3232 3.611025 TGGGGTCAAGATTTCAGGTTT 57.389 42.857 0.00 0.00 0.00 3.27
3014 3233 3.075882 TCATGGGGTCAAGATTTCAGGTT 59.924 43.478 0.00 0.00 0.00 3.50
3015 3234 2.649312 TCATGGGGTCAAGATTTCAGGT 59.351 45.455 0.00 0.00 0.00 4.00
3016 3235 3.370840 TCATGGGGTCAAGATTTCAGG 57.629 47.619 0.00 0.00 0.00 3.86
3017 3236 5.394883 CCATTTCATGGGGTCAAGATTTCAG 60.395 44.000 0.00 0.00 46.86 3.02
3018 3237 4.467082 CCATTTCATGGGGTCAAGATTTCA 59.533 41.667 0.00 0.00 46.86 2.69
3019 3238 5.014808 CCATTTCATGGGGTCAAGATTTC 57.985 43.478 0.00 0.00 46.86 2.17
3032 3251 4.092383 GCAAACTTAGCAAGCCATTTCATG 59.908 41.667 0.00 0.00 0.00 3.07
3033 3252 4.020839 AGCAAACTTAGCAAGCCATTTCAT 60.021 37.500 0.00 0.00 0.00 2.57
3034 3253 3.321682 AGCAAACTTAGCAAGCCATTTCA 59.678 39.130 0.00 0.00 0.00 2.69
3035 3254 3.917988 AGCAAACTTAGCAAGCCATTTC 58.082 40.909 0.00 0.00 0.00 2.17
3036 3255 4.060205 CAAGCAAACTTAGCAAGCCATTT 58.940 39.130 0.00 0.00 33.74 2.32
3061 3280 3.291584 TGCACAAATTCCACTACACCAA 58.708 40.909 0.00 0.00 0.00 3.67
3092 3313 5.997746 TCCATAGAACTTGACAGGAAACAAG 59.002 40.000 0.00 0.00 45.85 3.16
3093 3314 5.763204 GTCCATAGAACTTGACAGGAAACAA 59.237 40.000 0.00 0.00 0.00 2.83
3096 3317 5.560722 TGTCCATAGAACTTGACAGGAAA 57.439 39.130 0.00 0.00 33.09 3.13
3137 3358 4.466828 CAATGGAAAACTTGCTACAGACG 58.533 43.478 0.00 0.00 0.00 4.18
3138 3359 4.798574 CCAATGGAAAACTTGCTACAGAC 58.201 43.478 0.00 0.00 0.00 3.51
3139 3360 3.255642 GCCAATGGAAAACTTGCTACAGA 59.744 43.478 2.05 0.00 0.00 3.41
3140 3361 3.578688 GCCAATGGAAAACTTGCTACAG 58.421 45.455 2.05 0.00 0.00 2.74
3141 3362 2.298729 GGCCAATGGAAAACTTGCTACA 59.701 45.455 2.05 0.00 0.00 2.74
3142 3363 2.298729 TGGCCAATGGAAAACTTGCTAC 59.701 45.455 0.61 0.00 0.00 3.58
3143 3364 2.603021 TGGCCAATGGAAAACTTGCTA 58.397 42.857 0.61 0.00 0.00 3.49
3144 3365 1.422531 TGGCCAATGGAAAACTTGCT 58.577 45.000 0.61 0.00 0.00 3.91
3145 3366 2.027837 AGATGGCCAATGGAAAACTTGC 60.028 45.455 10.96 0.00 0.00 4.01
3146 3367 3.967332 AGATGGCCAATGGAAAACTTG 57.033 42.857 10.96 0.00 0.00 3.16
3147 3368 4.162651 AGAAGATGGCCAATGGAAAACTT 58.837 39.130 10.96 5.58 0.00 2.66
3148 3369 3.782992 AGAAGATGGCCAATGGAAAACT 58.217 40.909 10.96 0.00 0.00 2.66
3149 3370 4.541973 AAGAAGATGGCCAATGGAAAAC 57.458 40.909 10.96 0.00 0.00 2.43
3150 3371 4.020307 GGAAAGAAGATGGCCAATGGAAAA 60.020 41.667 10.96 0.00 0.00 2.29
3151 3372 3.515104 GGAAAGAAGATGGCCAATGGAAA 59.485 43.478 10.96 0.00 0.00 3.13
3152 3373 3.099141 GGAAAGAAGATGGCCAATGGAA 58.901 45.455 10.96 0.00 0.00 3.53
3153 3374 2.624029 GGGAAAGAAGATGGCCAATGGA 60.624 50.000 10.96 0.00 0.00 3.41
3154 3375 1.758862 GGGAAAGAAGATGGCCAATGG 59.241 52.381 10.96 0.00 0.00 3.16
3155 3376 2.743553 AGGGAAAGAAGATGGCCAATG 58.256 47.619 10.96 0.00 0.00 2.82
3156 3377 3.529319 AGTAGGGAAAGAAGATGGCCAAT 59.471 43.478 10.96 0.00 0.00 3.16
3157 3378 2.919602 AGTAGGGAAAGAAGATGGCCAA 59.080 45.455 10.96 0.00 0.00 4.52
3158 3379 2.239654 CAGTAGGGAAAGAAGATGGCCA 59.760 50.000 8.56 8.56 0.00 5.36
3159 3380 2.422093 CCAGTAGGGAAAGAAGATGGCC 60.422 54.545 0.00 0.00 40.01 5.36
3160 3381 2.505819 TCCAGTAGGGAAAGAAGATGGC 59.494 50.000 0.00 0.00 44.80 4.40
3171 3392 0.784495 ACAGACAGGTCCAGTAGGGA 59.216 55.000 0.00 0.00 45.89 4.20
3172 3393 2.379972 CTACAGACAGGTCCAGTAGGG 58.620 57.143 16.06 0.00 36.19 3.53
3173 3394 1.751924 GCTACAGACAGGTCCAGTAGG 59.248 57.143 21.24 10.46 38.28 3.18
3174 3395 2.447443 TGCTACAGACAGGTCCAGTAG 58.553 52.381 18.09 18.09 39.59 2.57
3175 3396 2.597578 TGCTACAGACAGGTCCAGTA 57.402 50.000 0.00 0.00 0.00 2.74
3176 3397 1.620819 CTTGCTACAGACAGGTCCAGT 59.379 52.381 0.00 0.00 0.00 4.00
3177 3398 1.620819 ACTTGCTACAGACAGGTCCAG 59.379 52.381 0.00 0.00 0.00 3.86
3178 3399 1.717032 ACTTGCTACAGACAGGTCCA 58.283 50.000 0.00 0.00 0.00 4.02
3179 3400 2.841442 AACTTGCTACAGACAGGTCC 57.159 50.000 0.00 0.00 0.00 4.46
3180 3401 3.498777 GGAAAACTTGCTACAGACAGGTC 59.501 47.826 0.00 0.00 0.00 3.85
3181 3402 3.118038 TGGAAAACTTGCTACAGACAGGT 60.118 43.478 0.00 0.00 0.00 4.00
3182 3403 3.476552 TGGAAAACTTGCTACAGACAGG 58.523 45.455 0.00 0.00 0.00 4.00
3183 3404 5.455392 CAATGGAAAACTTGCTACAGACAG 58.545 41.667 0.00 0.00 0.00 3.51
3222 3491 1.873486 GCCACCTGCAAACCAATGAAC 60.873 52.381 0.00 0.00 40.77 3.18
3276 3545 1.592669 CCATCCATCGTCTGGTCGC 60.593 63.158 6.66 0.00 46.08 5.19
3479 3749 3.159353 TCGTGCATTATAACGAGCAGT 57.841 42.857 8.76 0.00 43.40 4.40
3497 3768 3.128938 AGAACGTCCCTTCATAGAACTCG 59.871 47.826 0.00 0.00 0.00 4.18
3506 3777 2.206750 CGACAAAAGAACGTCCCTTCA 58.793 47.619 4.00 0.00 0.00 3.02
3510 3781 2.207590 AGAACGACAAAAGAACGTCCC 58.792 47.619 0.00 0.00 39.31 4.46
3512 3783 2.861935 TGGAGAACGACAAAAGAACGTC 59.138 45.455 0.00 0.00 39.31 4.34
3575 3846 2.156504 CGCTGCAACAAAACAAAACACA 59.843 40.909 0.00 0.00 0.00 3.72
3577 3848 1.127582 GCGCTGCAACAAAACAAAACA 59.872 42.857 0.00 0.00 0.00 2.83
3578 3849 1.528807 GGCGCTGCAACAAAACAAAAC 60.529 47.619 7.64 0.00 0.00 2.43
3579 3850 0.723981 GGCGCTGCAACAAAACAAAA 59.276 45.000 7.64 0.00 0.00 2.44
3580 3851 0.390340 TGGCGCTGCAACAAAACAAA 60.390 45.000 7.64 0.00 0.00 2.83
3581 3852 1.080995 GTGGCGCTGCAACAAAACAA 61.081 50.000 7.64 0.00 31.84 2.83
3654 3925 3.892588 GTGGGGAATGGAACTTGTTACAA 59.107 43.478 2.28 0.00 0.00 2.41
3738 4010 1.488705 CCTACCCAGTGACTTGCCCA 61.489 60.000 0.00 0.00 0.00 5.36
3759 4034 3.705604 CAAAGTGTGTTTGCCTGGTAAG 58.294 45.455 0.00 0.00 0.00 2.34
3760 4035 2.159170 GCAAAGTGTGTTTGCCTGGTAA 60.159 45.455 10.69 0.00 46.51 2.85
3823 4098 7.145932 AGGAAATTTTATGTCCAAGAACTCG 57.854 36.000 0.00 0.00 33.57 4.18
3828 4103 9.667107 CAGTAGTAGGAAATTTTATGTCCAAGA 57.333 33.333 0.00 0.00 33.57 3.02
3854 4129 1.566298 ATCAGGCCTCCAGTCCAACC 61.566 60.000 0.00 0.00 0.00 3.77
3870 4145 5.012458 CCTCCACATCAGAAATAGCCTATCA 59.988 44.000 0.00 0.00 0.00 2.15
3871 4146 5.012561 ACCTCCACATCAGAAATAGCCTATC 59.987 44.000 0.00 0.00 0.00 2.08
3876 4151 3.878778 ACACCTCCACATCAGAAATAGC 58.121 45.455 0.00 0.00 0.00 2.97
3894 4169 9.944376 TTTATAGCAGGAAAGGATATCATACAC 57.056 33.333 4.83 0.00 0.00 2.90
3916 4191 8.584157 TGCACAACAGGAGATTTGTATTTTTAT 58.416 29.630 0.00 0.00 34.12 1.40
3917 4192 7.865385 GTGCACAACAGGAGATTTGTATTTTTA 59.135 33.333 13.17 0.00 34.12 1.52
3918 4193 6.701400 GTGCACAACAGGAGATTTGTATTTTT 59.299 34.615 13.17 0.00 34.12 1.94
3919 4194 6.183360 TGTGCACAACAGGAGATTTGTATTTT 60.183 34.615 19.28 0.00 34.12 1.82
3920 4195 5.301551 TGTGCACAACAGGAGATTTGTATTT 59.698 36.000 19.28 0.00 34.12 1.40
3921 4196 4.826733 TGTGCACAACAGGAGATTTGTATT 59.173 37.500 19.28 0.00 34.12 1.89
3922 4197 4.397420 TGTGCACAACAGGAGATTTGTAT 58.603 39.130 19.28 0.00 34.12 2.29
3927 4202 3.489355 TGATTGTGCACAACAGGAGATT 58.511 40.909 33.29 15.81 40.74 2.40
3942 4217 1.200716 CAGTGGCGAGCAAATGATTGT 59.799 47.619 0.00 0.00 38.85 2.71
3955 4230 3.414700 GTCGAAGCACCAGTGGCG 61.415 66.667 9.78 0.00 36.08 5.69
3991 4266 4.500477 GCTTATTGAATCACATTTGTCGCC 59.500 41.667 0.00 0.00 0.00 5.54
4097 4372 5.302360 TCGTTCTAAGCATGGTTAAACTGT 58.698 37.500 24.01 5.23 0.00 3.55
4100 4375 4.436986 GCCTCGTTCTAAGCATGGTTAAAC 60.437 45.833 17.45 19.43 0.00 2.01
4101 4376 3.687698 GCCTCGTTCTAAGCATGGTTAAA 59.312 43.478 17.45 11.85 0.00 1.52
4106 4381 1.293924 CTGCCTCGTTCTAAGCATGG 58.706 55.000 0.00 0.00 34.16 3.66
4151 4426 4.019919 AGCGCATTACAACATCATCAAC 57.980 40.909 11.47 0.00 0.00 3.18
4184 4459 8.094798 ACGCAAAGATTTTTCTACTATGAACA 57.905 30.769 0.00 0.00 0.00 3.18
4194 4469 3.751175 TGGATCGACGCAAAGATTTTTCT 59.249 39.130 0.00 0.00 0.00 2.52
4200 4475 0.806102 CGGTGGATCGACGCAAAGAT 60.806 55.000 1.47 0.00 0.00 2.40
4223 4498 0.386100 CATCGGCCGATCTACAGTCG 60.386 60.000 37.10 19.65 38.75 4.18
4258 4533 0.958876 GGTGGTTTGGTGGATCGGTC 60.959 60.000 0.00 0.00 0.00 4.79
4270 4550 7.067372 GGTTAGTTTTGTTGTAGTAGGTGGTTT 59.933 37.037 0.00 0.00 0.00 3.27
4317 4597 2.545946 AGCTCAAGAAAAGAAGTGTCGC 59.454 45.455 0.00 0.00 0.00 5.19
4336 4616 2.009774 AGTGGCGTGTCATGATTAAGC 58.990 47.619 0.00 5.52 0.00 3.09
4443 4723 5.001867 CCATCATCGTAAAATCGTAACCG 57.998 43.478 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.