Multiple sequence alignment - TraesCS3D01G318800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G318800 chr3D 100.000 4537 0 0 1 4537 432539261 432543797 0.000000e+00 8379.0
1 TraesCS3D01G318800 chr3D 92.593 81 6 0 593 673 489733957 489734037 2.870000e-22 117.0
2 TraesCS3D01G318800 chr3B 92.676 3195 138 35 1387 4537 564770129 564773271 0.000000e+00 4516.0
3 TraesCS3D01G318800 chr3B 90.766 509 36 7 863 1366 564769648 564770150 0.000000e+00 669.0
4 TraesCS3D01G318800 chr3A 91.298 3183 171 52 863 4006 570670432 570673547 0.000000e+00 4246.0
5 TraesCS3D01G318800 chr3A 92.514 521 22 6 4017 4537 570674007 570674510 0.000000e+00 730.0
6 TraesCS3D01G318800 chr3A 82.407 108 10 3 3782 3885 581275430 581275532 8.090000e-13 86.1
7 TraesCS3D01G318800 chr6A 77.647 595 107 18 3882 4463 508286234 508285653 5.620000e-89 339.0
8 TraesCS3D01G318800 chr6A 82.456 114 9 8 686 792 480304328 480304219 6.250000e-14 89.8
9 TraesCS3D01G318800 chr6A 81.416 113 14 6 686 792 537021048 537020937 8.090000e-13 86.1
10 TraesCS3D01G318800 chr6D 77.462 599 109 17 3882 4468 367856986 367856402 7.270000e-88 335.0
11 TraesCS3D01G318800 chr6B 81.567 217 24 8 595 798 673617989 673618202 1.010000e-36 165.0
12 TraesCS3D01G318800 chr5A 79.918 244 30 12 595 827 503534140 503534375 1.310000e-35 161.0
13 TraesCS3D01G318800 chr5A 82.443 131 18 3 625 750 651797173 651797043 4.800000e-20 110.0
14 TraesCS3D01G318800 chr1D 81.818 198 26 4 588 775 12028518 12028715 1.690000e-34 158.0
15 TraesCS3D01G318800 chr1D 89.247 93 10 0 588 680 12159405 12159497 2.870000e-22 117.0
16 TraesCS3D01G318800 chr5D 80.088 226 32 7 600 814 288378015 288378238 6.080000e-34 156.0
17 TraesCS3D01G318800 chr5D 78.448 232 33 12 580 797 495037013 495036785 7.920000e-28 135.0
18 TraesCS3D01G318800 chr7B 84.545 110 10 4 3782 3888 667634790 667634685 8.030000e-18 102.0
19 TraesCS3D01G318800 chr7A 80.147 136 19 7 686 814 33982140 33982274 1.340000e-15 95.3
20 TraesCS3D01G318800 chr7A 84.783 92 12 2 3795 3885 74422247 74422157 1.740000e-14 91.6
21 TraesCS3D01G318800 chr7A 90.000 60 5 1 3830 3888 43836958 43837017 4.870000e-10 76.8
22 TraesCS3D01G318800 chr1B 75.000 244 40 12 592 818 17767165 17767404 4.830000e-15 93.5
23 TraesCS3D01G318800 chr1B 80.392 102 13 6 697 793 420420990 420421089 2.260000e-08 71.3
24 TraesCS3D01G318800 chr2B 85.227 88 13 0 591 678 72583655 72583742 1.740000e-14 91.6
25 TraesCS3D01G318800 chr4A 82.407 108 12 5 3782 3886 632983060 632983163 2.250000e-13 87.9
26 TraesCS3D01G318800 chr5B 94.643 56 2 1 3830 3885 32476153 32476207 8.090000e-13 86.1
27 TraesCS3D01G318800 chr5B 81.651 109 10 6 3782 3885 708496730 708496627 1.050000e-11 82.4
28 TraesCS3D01G318800 chr2D 100.000 29 0 0 492 520 45542061 45542089 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G318800 chr3D 432539261 432543797 4536 False 8379.0 8379 100.000 1 4537 1 chr3D.!!$F1 4536
1 TraesCS3D01G318800 chr3B 564769648 564773271 3623 False 2592.5 4516 91.721 863 4537 2 chr3B.!!$F1 3674
2 TraesCS3D01G318800 chr3A 570670432 570674510 4078 False 2488.0 4246 91.906 863 4537 2 chr3A.!!$F2 3674
3 TraesCS3D01G318800 chr6A 508285653 508286234 581 True 339.0 339 77.647 3882 4463 1 chr6A.!!$R2 581
4 TraesCS3D01G318800 chr6D 367856402 367856986 584 True 335.0 335 77.462 3882 4468 1 chr6D.!!$R1 586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
850 851 0.034574 TGACAAGTTGTGCACCAGGT 60.035 50.0 14.57 5.4 0.00 4.00 F
857 858 0.037590 TTGTGCACCAGGTACATCCC 59.962 55.0 15.69 0.0 41.91 3.85 F
861 862 0.037590 GCACCAGGTACATCCCACAA 59.962 55.0 0.00 0.0 36.75 3.33 F
1595 1596 0.389817 CTCAACGCCGTGGATTCTGA 60.390 55.0 0.00 0.0 0.00 3.27 F
2740 2789 0.106369 CACACCCATGGATGCCTGAT 60.106 55.0 15.22 0.0 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2563 2600 1.725557 CGGCGTGCTTAGGAGAGCTA 61.726 60.000 0.00 0.00 43.11 3.32 R
2597 2634 3.458779 AATTAATTGTGCGCGTACGTT 57.541 38.095 22.16 19.96 42.83 3.99 R
2598 2635 3.458779 AAATTAATTGTGCGCGTACGT 57.541 38.095 22.16 10.86 42.83 3.57 R
3509 3558 0.179111 CATCATCGTACGCCACACCT 60.179 55.000 11.24 0.00 0.00 4.00 R
3548 3597 0.596082 AAACATCAAACGAAGGGCCG 59.404 50.000 0.00 0.00 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.675684 TTCTACTGTTCATATCAGGTGCA 57.324 39.130 0.00 0.00 37.25 4.57
24 25 5.876651 TCTACTGTTCATATCAGGTGCAT 57.123 39.130 0.00 0.00 37.25 3.96
25 26 6.976934 TCTACTGTTCATATCAGGTGCATA 57.023 37.500 0.00 0.00 37.25 3.14
26 27 7.544804 TCTACTGTTCATATCAGGTGCATAT 57.455 36.000 0.00 0.00 37.25 1.78
27 28 7.381323 TCTACTGTTCATATCAGGTGCATATG 58.619 38.462 0.00 0.00 37.25 1.78
28 29 4.758674 ACTGTTCATATCAGGTGCATATGC 59.241 41.667 21.09 21.09 35.13 3.14
29 30 5.688235 ACTGTTCATATCAGGTGCATATGCA 60.688 40.000 26.32 26.32 41.69 3.96
39 40 3.612517 GCATATGCACCCGAGATCA 57.387 52.632 22.84 0.00 41.59 2.92
40 41 1.436600 GCATATGCACCCGAGATCAG 58.563 55.000 22.84 0.00 41.59 2.90
41 42 1.001293 GCATATGCACCCGAGATCAGA 59.999 52.381 22.84 0.00 41.59 3.27
42 43 2.548707 GCATATGCACCCGAGATCAGAA 60.549 50.000 22.84 0.00 41.59 3.02
43 44 3.867600 GCATATGCACCCGAGATCAGAAT 60.868 47.826 22.84 0.00 41.59 2.40
44 45 2.251409 ATGCACCCGAGATCAGAATG 57.749 50.000 0.00 0.00 37.54 2.67
45 46 0.178767 TGCACCCGAGATCAGAATGG 59.821 55.000 0.00 0.00 36.16 3.16
46 47 1.162800 GCACCCGAGATCAGAATGGC 61.163 60.000 0.00 0.00 36.16 4.40
47 48 0.178767 CACCCGAGATCAGAATGGCA 59.821 55.000 0.00 0.00 36.16 4.92
48 49 0.467384 ACCCGAGATCAGAATGGCAG 59.533 55.000 0.00 0.00 36.16 4.85
49 50 0.467384 CCCGAGATCAGAATGGCAGT 59.533 55.000 0.00 0.00 36.16 4.40
50 51 1.134280 CCCGAGATCAGAATGGCAGTT 60.134 52.381 0.00 0.00 36.16 3.16
51 52 2.208431 CCGAGATCAGAATGGCAGTTC 58.792 52.381 0.00 0.00 36.16 3.01
52 53 2.419159 CCGAGATCAGAATGGCAGTTCA 60.419 50.000 10.74 0.00 36.16 3.18
53 54 3.464907 CGAGATCAGAATGGCAGTTCAT 58.535 45.455 10.74 0.00 36.16 2.57
54 55 3.493877 CGAGATCAGAATGGCAGTTCATC 59.506 47.826 10.74 3.89 36.16 2.92
55 56 3.464907 AGATCAGAATGGCAGTTCATCG 58.535 45.455 10.74 0.00 36.16 3.84
56 57 1.372582 TCAGAATGGCAGTTCATCGC 58.627 50.000 10.74 0.00 36.16 4.58
57 58 1.065926 TCAGAATGGCAGTTCATCGCT 60.066 47.619 10.74 0.00 36.16 4.93
58 59 2.168313 TCAGAATGGCAGTTCATCGCTA 59.832 45.455 10.74 0.00 36.16 4.26
59 60 2.938451 CAGAATGGCAGTTCATCGCTAA 59.062 45.455 10.74 0.00 0.00 3.09
60 61 3.374988 CAGAATGGCAGTTCATCGCTAAA 59.625 43.478 10.74 0.00 0.00 1.85
61 62 3.375299 AGAATGGCAGTTCATCGCTAAAC 59.625 43.478 10.74 0.00 0.00 2.01
62 63 1.448985 TGGCAGTTCATCGCTAAACC 58.551 50.000 0.00 0.00 0.00 3.27
63 64 0.733150 GGCAGTTCATCGCTAAACCC 59.267 55.000 0.00 0.00 0.00 4.11
64 65 0.733150 GCAGTTCATCGCTAAACCCC 59.267 55.000 0.00 0.00 0.00 4.95
65 66 1.679032 GCAGTTCATCGCTAAACCCCT 60.679 52.381 0.00 0.00 0.00 4.79
66 67 2.280628 CAGTTCATCGCTAAACCCCTC 58.719 52.381 0.00 0.00 0.00 4.30
67 68 2.093447 CAGTTCATCGCTAAACCCCTCT 60.093 50.000 0.00 0.00 0.00 3.69
68 69 2.168728 AGTTCATCGCTAAACCCCTCTC 59.831 50.000 0.00 0.00 0.00 3.20
69 70 1.120530 TCATCGCTAAACCCCTCTCC 58.879 55.000 0.00 0.00 0.00 3.71
70 71 1.123928 CATCGCTAAACCCCTCTCCT 58.876 55.000 0.00 0.00 0.00 3.69
71 72 1.486726 CATCGCTAAACCCCTCTCCTT 59.513 52.381 0.00 0.00 0.00 3.36
72 73 1.192428 TCGCTAAACCCCTCTCCTTC 58.808 55.000 0.00 0.00 0.00 3.46
73 74 1.196012 CGCTAAACCCCTCTCCTTCT 58.804 55.000 0.00 0.00 0.00 2.85
74 75 2.024655 TCGCTAAACCCCTCTCCTTCTA 60.025 50.000 0.00 0.00 0.00 2.10
75 76 2.966516 CGCTAAACCCCTCTCCTTCTAT 59.033 50.000 0.00 0.00 0.00 1.98
76 77 3.243907 CGCTAAACCCCTCTCCTTCTATG 60.244 52.174 0.00 0.00 0.00 2.23
77 78 3.071747 GCTAAACCCCTCTCCTTCTATGG 59.928 52.174 0.00 0.00 0.00 2.74
78 79 1.512735 AACCCCTCTCCTTCTATGGC 58.487 55.000 0.00 0.00 0.00 4.40
79 80 0.343372 ACCCCTCTCCTTCTATGGCA 59.657 55.000 0.00 0.00 0.00 4.92
80 81 1.061033 ACCCCTCTCCTTCTATGGCAT 60.061 52.381 4.88 4.88 0.00 4.40
81 82 1.627834 CCCCTCTCCTTCTATGGCATC 59.372 57.143 1.65 0.00 0.00 3.91
82 83 2.333069 CCCTCTCCTTCTATGGCATCA 58.667 52.381 1.65 0.00 0.00 3.07
83 84 2.911636 CCCTCTCCTTCTATGGCATCAT 59.088 50.000 1.65 0.00 37.40 2.45
84 85 4.099633 CCCTCTCCTTCTATGGCATCATA 58.900 47.826 1.65 0.00 34.96 2.15
85 86 4.720773 CCCTCTCCTTCTATGGCATCATAT 59.279 45.833 1.65 0.00 35.53 1.78
86 87 5.396548 CCCTCTCCTTCTATGGCATCATATG 60.397 48.000 1.65 0.00 35.53 1.78
87 88 5.189342 CCTCTCCTTCTATGGCATCATATGT 59.811 44.000 1.65 0.00 35.53 2.29
88 89 6.296317 CCTCTCCTTCTATGGCATCATATGTT 60.296 42.308 1.65 0.00 35.53 2.71
89 90 7.093156 CCTCTCCTTCTATGGCATCATATGTTA 60.093 40.741 1.65 0.00 35.53 2.41
90 91 7.615403 TCTCCTTCTATGGCATCATATGTTAC 58.385 38.462 1.65 0.00 35.53 2.50
91 92 6.711277 TCCTTCTATGGCATCATATGTTACC 58.289 40.000 1.65 0.00 35.53 2.85
92 93 6.272090 TCCTTCTATGGCATCATATGTTACCA 59.728 38.462 1.65 7.97 35.53 3.25
93 94 6.372659 CCTTCTATGGCATCATATGTTACCAC 59.627 42.308 1.65 0.00 35.53 4.16
94 95 6.432403 TCTATGGCATCATATGTTACCACA 57.568 37.500 1.65 0.00 35.53 4.17
95 96 7.019656 TCTATGGCATCATATGTTACCACAT 57.980 36.000 1.65 6.71 46.07 3.21
96 97 5.970317 ATGGCATCATATGTTACCACATG 57.030 39.130 7.73 1.70 43.92 3.21
97 98 4.790937 TGGCATCATATGTTACCACATGT 58.209 39.130 1.90 0.00 43.92 3.21
98 99 4.821260 TGGCATCATATGTTACCACATGTC 59.179 41.667 1.90 0.00 43.92 3.06
99 100 4.083855 GGCATCATATGTTACCACATGTCG 60.084 45.833 1.90 0.00 43.92 4.35
100 101 4.083855 GCATCATATGTTACCACATGTCGG 60.084 45.833 11.40 11.40 43.92 4.79
101 102 4.066646 TCATATGTTACCACATGTCGGG 57.933 45.455 15.78 9.43 43.92 5.14
102 103 3.452990 TCATATGTTACCACATGTCGGGT 59.547 43.478 12.17 12.17 43.92 5.28
103 104 4.650131 TCATATGTTACCACATGTCGGGTA 59.350 41.667 10.30 10.30 43.92 3.69
104 105 2.747396 TGTTACCACATGTCGGGTAC 57.253 50.000 13.26 11.90 39.29 3.34
105 106 2.250031 TGTTACCACATGTCGGGTACT 58.750 47.619 13.26 0.00 39.29 2.73
106 107 2.231964 TGTTACCACATGTCGGGTACTC 59.768 50.000 13.26 10.52 39.29 2.59
107 108 2.494870 GTTACCACATGTCGGGTACTCT 59.505 50.000 13.26 0.00 39.29 3.24
108 109 1.183549 ACCACATGTCGGGTACTCTC 58.816 55.000 6.08 0.00 35.09 3.20
109 110 1.272536 ACCACATGTCGGGTACTCTCT 60.273 52.381 6.08 0.00 35.09 3.10
110 111 1.405821 CCACATGTCGGGTACTCTCTC 59.594 57.143 0.00 0.00 0.00 3.20
111 112 1.405821 CACATGTCGGGTACTCTCTCC 59.594 57.143 0.00 0.00 0.00 3.71
112 113 1.285373 ACATGTCGGGTACTCTCTCCT 59.715 52.381 0.00 0.00 0.00 3.69
113 114 2.291670 ACATGTCGGGTACTCTCTCCTT 60.292 50.000 0.00 0.00 0.00 3.36
114 115 2.599408 TGTCGGGTACTCTCTCCTTT 57.401 50.000 0.00 0.00 0.00 3.11
115 116 2.444421 TGTCGGGTACTCTCTCCTTTC 58.556 52.381 0.00 0.00 0.00 2.62
116 117 1.750206 GTCGGGTACTCTCTCCTTTCC 59.250 57.143 0.00 0.00 0.00 3.13
117 118 1.639628 TCGGGTACTCTCTCCTTTCCT 59.360 52.381 0.00 0.00 0.00 3.36
118 119 2.848694 TCGGGTACTCTCTCCTTTCCTA 59.151 50.000 0.00 0.00 0.00 2.94
119 120 3.267812 TCGGGTACTCTCTCCTTTCCTAA 59.732 47.826 0.00 0.00 0.00 2.69
120 121 4.079327 TCGGGTACTCTCTCCTTTCCTAAT 60.079 45.833 0.00 0.00 0.00 1.73
121 122 4.650131 CGGGTACTCTCTCCTTTCCTAATT 59.350 45.833 0.00 0.00 0.00 1.40
122 123 5.128991 CGGGTACTCTCTCCTTTCCTAATTT 59.871 44.000 0.00 0.00 0.00 1.82
123 124 6.351966 CGGGTACTCTCTCCTTTCCTAATTTT 60.352 42.308 0.00 0.00 0.00 1.82
124 125 7.147776 CGGGTACTCTCTCCTTTCCTAATTTTA 60.148 40.741 0.00 0.00 0.00 1.52
125 126 8.715842 GGGTACTCTCTCCTTTCCTAATTTTAT 58.284 37.037 0.00 0.00 0.00 1.40
126 127 9.549078 GGTACTCTCTCCTTTCCTAATTTTATG 57.451 37.037 0.00 0.00 0.00 1.90
127 128 9.549078 GTACTCTCTCCTTTCCTAATTTTATGG 57.451 37.037 0.00 0.00 0.00 2.74
128 129 8.164057 ACTCTCTCCTTTCCTAATTTTATGGT 57.836 34.615 0.00 0.00 0.00 3.55
129 130 8.049721 ACTCTCTCCTTTCCTAATTTTATGGTG 58.950 37.037 0.00 0.00 0.00 4.17
130 131 7.928873 TCTCTCCTTTCCTAATTTTATGGTGT 58.071 34.615 0.00 0.00 0.00 4.16
131 132 8.390921 TCTCTCCTTTCCTAATTTTATGGTGTT 58.609 33.333 0.00 0.00 0.00 3.32
132 133 8.575649 TCTCCTTTCCTAATTTTATGGTGTTC 57.424 34.615 0.00 0.00 0.00 3.18
133 134 8.390921 TCTCCTTTCCTAATTTTATGGTGTTCT 58.609 33.333 0.00 0.00 0.00 3.01
134 135 9.681062 CTCCTTTCCTAATTTTATGGTGTTCTA 57.319 33.333 0.00 0.00 0.00 2.10
135 136 9.681062 TCCTTTCCTAATTTTATGGTGTTCTAG 57.319 33.333 0.00 0.00 0.00 2.43
136 137 8.406297 CCTTTCCTAATTTTATGGTGTTCTAGC 58.594 37.037 0.00 0.00 0.00 3.42
137 138 9.178758 CTTTCCTAATTTTATGGTGTTCTAGCT 57.821 33.333 0.00 0.00 0.00 3.32
138 139 9.528489 TTTCCTAATTTTATGGTGTTCTAGCTT 57.472 29.630 0.00 0.00 0.00 3.74
139 140 9.528489 TTCCTAATTTTATGGTGTTCTAGCTTT 57.472 29.630 0.00 0.00 0.00 3.51
140 141 8.956426 TCCTAATTTTATGGTGTTCTAGCTTTG 58.044 33.333 0.00 0.00 0.00 2.77
141 142 8.739972 CCTAATTTTATGGTGTTCTAGCTTTGT 58.260 33.333 0.00 0.00 0.00 2.83
142 143 9.774742 CTAATTTTATGGTGTTCTAGCTTTGTC 57.225 33.333 0.00 0.00 0.00 3.18
143 144 6.569179 TTTTATGGTGTTCTAGCTTTGTCC 57.431 37.500 0.00 0.00 0.00 4.02
144 145 3.788227 ATGGTGTTCTAGCTTTGTCCA 57.212 42.857 0.00 0.00 0.00 4.02
145 146 3.569194 TGGTGTTCTAGCTTTGTCCAA 57.431 42.857 0.00 0.00 0.00 3.53
146 147 3.892284 TGGTGTTCTAGCTTTGTCCAAA 58.108 40.909 0.00 0.00 0.00 3.28
162 163 9.986833 CTTTGTCCAAAGTCAAAATTTTAAAGG 57.013 29.630 10.86 1.10 42.02 3.11
163 164 9.508642 TTTGTCCAAAGTCAAAATTTTAAAGGT 57.491 25.926 2.44 0.00 29.78 3.50
164 165 9.508642 TTGTCCAAAGTCAAAATTTTAAAGGTT 57.491 25.926 2.44 0.00 0.00 3.50
165 166 8.940952 TGTCCAAAGTCAAAATTTTAAAGGTTG 58.059 29.630 2.44 5.14 0.00 3.77
166 167 9.157104 GTCCAAAGTCAAAATTTTAAAGGTTGA 57.843 29.630 2.44 6.31 0.00 3.18
167 168 9.157104 TCCAAAGTCAAAATTTTAAAGGTTGAC 57.843 29.630 21.41 21.41 45.37 3.18
237 238 8.918202 TTGAAACTAATTGGTCTTGTAGATGT 57.082 30.769 0.00 0.00 0.00 3.06
238 239 8.918202 TGAAACTAATTGGTCTTGTAGATGTT 57.082 30.769 0.00 0.00 0.00 2.71
239 240 8.783093 TGAAACTAATTGGTCTTGTAGATGTTG 58.217 33.333 0.00 0.00 0.00 3.33
240 241 7.687941 AACTAATTGGTCTTGTAGATGTTGG 57.312 36.000 0.00 0.00 0.00 3.77
241 242 5.648092 ACTAATTGGTCTTGTAGATGTTGGC 59.352 40.000 0.00 0.00 0.00 4.52
242 243 3.500448 TTGGTCTTGTAGATGTTGGCA 57.500 42.857 0.00 0.00 0.00 4.92
243 244 3.719268 TGGTCTTGTAGATGTTGGCAT 57.281 42.857 0.00 0.00 38.18 4.40
244 245 4.032960 TGGTCTTGTAGATGTTGGCATT 57.967 40.909 0.00 0.00 35.07 3.56
245 246 4.406456 TGGTCTTGTAGATGTTGGCATTT 58.594 39.130 0.00 0.00 35.07 2.32
246 247 4.832266 TGGTCTTGTAGATGTTGGCATTTT 59.168 37.500 0.00 0.00 35.07 1.82
247 248 5.304101 TGGTCTTGTAGATGTTGGCATTTTT 59.696 36.000 0.00 0.00 35.07 1.94
269 270 8.610248 TTTTTCATAGACTTGGTCGAATGTAA 57.390 30.769 12.26 8.64 37.67 2.41
270 271 8.610248 TTTTCATAGACTTGGTCGAATGTAAA 57.390 30.769 12.26 12.14 37.67 2.01
271 272 7.827819 TTCATAGACTTGGTCGAATGTAAAG 57.172 36.000 12.26 0.00 37.67 1.85
272 273 7.165460 TCATAGACTTGGTCGAATGTAAAGA 57.835 36.000 12.26 0.00 37.67 2.52
273 274 7.608153 TCATAGACTTGGTCGAATGTAAAGAA 58.392 34.615 12.26 0.00 37.67 2.52
274 275 7.759886 TCATAGACTTGGTCGAATGTAAAGAAG 59.240 37.037 12.26 0.00 37.67 2.85
275 276 5.855045 AGACTTGGTCGAATGTAAAGAAGT 58.145 37.500 0.00 0.00 37.67 3.01
276 277 6.289064 AGACTTGGTCGAATGTAAAGAAGTT 58.711 36.000 0.00 0.00 37.67 2.66
277 278 6.766467 AGACTTGGTCGAATGTAAAGAAGTTT 59.234 34.615 0.00 0.00 37.67 2.66
278 279 6.725246 ACTTGGTCGAATGTAAAGAAGTTTG 58.275 36.000 0.00 0.00 0.00 2.93
279 280 6.540914 ACTTGGTCGAATGTAAAGAAGTTTGA 59.459 34.615 0.00 0.00 0.00 2.69
280 281 7.228706 ACTTGGTCGAATGTAAAGAAGTTTGAT 59.771 33.333 0.00 0.00 0.00 2.57
281 282 7.504924 TGGTCGAATGTAAAGAAGTTTGATT 57.495 32.000 0.00 0.00 0.00 2.57
282 283 7.359595 TGGTCGAATGTAAAGAAGTTTGATTG 58.640 34.615 0.00 0.00 0.00 2.67
283 284 7.227711 TGGTCGAATGTAAAGAAGTTTGATTGA 59.772 33.333 0.00 0.00 0.00 2.57
284 285 7.746475 GGTCGAATGTAAAGAAGTTTGATTGAG 59.254 37.037 0.00 0.00 0.00 3.02
285 286 7.746475 GTCGAATGTAAAGAAGTTTGATTGAGG 59.254 37.037 0.00 0.00 0.00 3.86
286 287 7.659799 TCGAATGTAAAGAAGTTTGATTGAGGA 59.340 33.333 0.00 0.00 0.00 3.71
287 288 7.746475 CGAATGTAAAGAAGTTTGATTGAGGAC 59.254 37.037 0.00 0.00 0.00 3.85
288 289 8.463930 AATGTAAAGAAGTTTGATTGAGGACA 57.536 30.769 0.00 0.00 0.00 4.02
289 290 7.873719 TGTAAAGAAGTTTGATTGAGGACAA 57.126 32.000 0.00 0.00 40.42 3.18
290 291 8.287439 TGTAAAGAAGTTTGATTGAGGACAAA 57.713 30.769 0.00 0.00 39.54 2.83
298 299 7.826260 GTTTGATTGAGGACAAACTTCAAAA 57.174 32.000 13.19 0.00 45.15 2.44
299 300 8.424274 GTTTGATTGAGGACAAACTTCAAAAT 57.576 30.769 13.19 0.00 45.15 1.82
300 301 8.882736 GTTTGATTGAGGACAAACTTCAAAATT 58.117 29.630 13.19 0.00 45.15 1.82
301 302 8.647143 TTGATTGAGGACAAACTTCAAAATTC 57.353 30.769 0.00 0.00 45.15 2.17
302 303 7.780064 TGATTGAGGACAAACTTCAAAATTCA 58.220 30.769 0.00 0.00 45.15 2.57
303 304 8.256605 TGATTGAGGACAAACTTCAAAATTCAA 58.743 29.630 0.00 0.00 45.15 2.69
304 305 9.097257 GATTGAGGACAAACTTCAAAATTCAAA 57.903 29.630 0.00 0.00 45.15 2.69
305 306 7.826260 TGAGGACAAACTTCAAAATTCAAAC 57.174 32.000 0.00 0.00 31.75 2.93
306 307 7.382110 TGAGGACAAACTTCAAAATTCAAACA 58.618 30.769 0.00 0.00 31.75 2.83
307 308 7.875041 TGAGGACAAACTTCAAAATTCAAACAA 59.125 29.630 0.00 0.00 31.75 2.83
308 309 8.791327 AGGACAAACTTCAAAATTCAAACAAT 57.209 26.923 0.00 0.00 0.00 2.71
309 310 9.230122 AGGACAAACTTCAAAATTCAAACAATT 57.770 25.926 0.00 0.00 0.00 2.32
310 311 9.838975 GGACAAACTTCAAAATTCAAACAATTT 57.161 25.926 0.00 0.00 0.00 1.82
326 327 9.950680 TCAAACAATTTGAGATTGAAAGAGTAC 57.049 29.630 2.79 0.00 44.21 2.73
327 328 9.956720 CAAACAATTTGAGATTGAAAGAGTACT 57.043 29.630 2.79 0.00 43.26 2.73
345 346 9.852091 AAGAGTACTAACTAATTTTACTCACGG 57.148 33.333 0.00 0.00 40.70 4.94
346 347 9.018582 AGAGTACTAACTAATTTTACTCACGGT 57.981 33.333 0.00 0.00 40.70 4.83
347 348 9.631452 GAGTACTAACTAATTTTACTCACGGTT 57.369 33.333 0.00 0.00 38.91 4.44
348 349 9.631452 AGTACTAACTAATTTTACTCACGGTTC 57.369 33.333 0.00 0.00 32.84 3.62
349 350 9.631452 GTACTAACTAATTTTACTCACGGTTCT 57.369 33.333 0.00 0.00 0.00 3.01
358 359 6.690194 TTTACTCACGGTTCTATCTACTCC 57.310 41.667 0.00 0.00 0.00 3.85
359 360 4.506937 ACTCACGGTTCTATCTACTCCT 57.493 45.455 0.00 0.00 0.00 3.69
360 361 5.627182 ACTCACGGTTCTATCTACTCCTA 57.373 43.478 0.00 0.00 0.00 2.94
361 362 5.613329 ACTCACGGTTCTATCTACTCCTAG 58.387 45.833 0.00 0.00 0.00 3.02
362 363 5.130809 ACTCACGGTTCTATCTACTCCTAGT 59.869 44.000 0.00 0.00 0.00 2.57
363 364 5.609423 TCACGGTTCTATCTACTCCTAGTC 58.391 45.833 0.00 0.00 0.00 2.59
364 365 5.129980 TCACGGTTCTATCTACTCCTAGTCA 59.870 44.000 0.00 0.00 0.00 3.41
365 366 5.998981 CACGGTTCTATCTACTCCTAGTCAT 59.001 44.000 0.00 0.00 0.00 3.06
366 367 6.148150 CACGGTTCTATCTACTCCTAGTCATC 59.852 46.154 0.00 0.00 0.00 2.92
367 368 6.183361 ACGGTTCTATCTACTCCTAGTCATCA 60.183 42.308 0.00 0.00 0.00 3.07
368 369 6.882140 CGGTTCTATCTACTCCTAGTCATCAT 59.118 42.308 0.00 0.00 0.00 2.45
369 370 7.065324 CGGTTCTATCTACTCCTAGTCATCATC 59.935 44.444 0.00 0.00 0.00 2.92
370 371 8.107095 GGTTCTATCTACTCCTAGTCATCATCT 58.893 40.741 0.00 0.00 0.00 2.90
375 376 8.806429 ATCTACTCCTAGTCATCATCTATGTG 57.194 38.462 0.00 0.00 36.89 3.21
376 377 7.171653 TCTACTCCTAGTCATCATCTATGTGG 58.828 42.308 0.00 0.00 36.89 4.17
377 378 5.710646 ACTCCTAGTCATCATCTATGTGGT 58.289 41.667 0.00 0.00 36.89 4.16
378 379 5.772672 ACTCCTAGTCATCATCTATGTGGTC 59.227 44.000 0.00 0.00 36.89 4.02
379 380 5.705400 TCCTAGTCATCATCTATGTGGTCA 58.295 41.667 0.00 0.00 36.89 4.02
380 381 6.136155 TCCTAGTCATCATCTATGTGGTCAA 58.864 40.000 0.00 0.00 36.89 3.18
381 382 6.266330 TCCTAGTCATCATCTATGTGGTCAAG 59.734 42.308 0.00 0.00 36.89 3.02
382 383 4.701765 AGTCATCATCTATGTGGTCAAGC 58.298 43.478 0.00 0.00 36.89 4.01
383 384 4.408270 AGTCATCATCTATGTGGTCAAGCT 59.592 41.667 0.00 0.00 36.89 3.74
384 385 5.600069 AGTCATCATCTATGTGGTCAAGCTA 59.400 40.000 0.00 0.00 36.89 3.32
385 386 6.098838 AGTCATCATCTATGTGGTCAAGCTAA 59.901 38.462 0.00 0.00 36.89 3.09
386 387 6.423302 GTCATCATCTATGTGGTCAAGCTAAG 59.577 42.308 0.00 0.00 36.89 2.18
387 388 4.697514 TCATCTATGTGGTCAAGCTAAGC 58.302 43.478 0.00 0.00 0.00 3.09
388 389 4.406972 TCATCTATGTGGTCAAGCTAAGCT 59.593 41.667 0.00 0.00 42.56 3.74
389 390 5.598417 TCATCTATGTGGTCAAGCTAAGCTA 59.402 40.000 0.00 0.00 38.25 3.32
390 391 5.932619 TCTATGTGGTCAAGCTAAGCTAA 57.067 39.130 0.00 0.00 38.25 3.09
391 392 6.485830 TCTATGTGGTCAAGCTAAGCTAAT 57.514 37.500 0.00 0.00 38.25 1.73
392 393 7.597288 TCTATGTGGTCAAGCTAAGCTAATA 57.403 36.000 0.00 0.00 38.25 0.98
393 394 8.018537 TCTATGTGGTCAAGCTAAGCTAATAA 57.981 34.615 0.00 0.00 38.25 1.40
394 395 8.482943 TCTATGTGGTCAAGCTAAGCTAATAAA 58.517 33.333 0.00 0.00 38.25 1.40
395 396 7.938140 ATGTGGTCAAGCTAAGCTAATAAAA 57.062 32.000 0.00 0.00 38.25 1.52
396 397 7.377766 TGTGGTCAAGCTAAGCTAATAAAAG 57.622 36.000 0.00 0.00 38.25 2.27
397 398 6.940298 TGTGGTCAAGCTAAGCTAATAAAAGT 59.060 34.615 0.00 0.00 38.25 2.66
398 399 7.119262 TGTGGTCAAGCTAAGCTAATAAAAGTC 59.881 37.037 0.00 0.00 38.25 3.01
399 400 6.598064 TGGTCAAGCTAAGCTAATAAAAGTCC 59.402 38.462 0.00 0.00 38.25 3.85
400 401 6.598064 GGTCAAGCTAAGCTAATAAAAGTCCA 59.402 38.462 0.00 0.00 38.25 4.02
401 402 7.120726 GGTCAAGCTAAGCTAATAAAAGTCCAA 59.879 37.037 0.00 0.00 38.25 3.53
402 403 8.178313 GTCAAGCTAAGCTAATAAAAGTCCAAG 58.822 37.037 0.00 0.00 38.25 3.61
403 404 6.685527 AGCTAAGCTAATAAAAGTCCAAGC 57.314 37.500 0.00 0.00 36.99 4.01
404 405 6.180472 AGCTAAGCTAATAAAAGTCCAAGCA 58.820 36.000 0.00 0.00 36.99 3.91
405 406 6.659242 AGCTAAGCTAATAAAAGTCCAAGCAA 59.341 34.615 0.00 0.00 36.99 3.91
406 407 7.340487 AGCTAAGCTAATAAAAGTCCAAGCAAT 59.660 33.333 0.00 0.00 36.99 3.56
407 408 7.976175 GCTAAGCTAATAAAAGTCCAAGCAATT 59.024 33.333 0.00 0.00 32.42 2.32
410 411 8.581253 AGCTAATAAAAGTCCAAGCAATTAGT 57.419 30.769 0.00 0.00 31.29 2.24
411 412 8.462016 AGCTAATAAAAGTCCAAGCAATTAGTG 58.538 33.333 0.00 0.00 31.29 2.74
412 413 8.244113 GCTAATAAAAGTCCAAGCAATTAGTGT 58.756 33.333 0.00 0.00 31.29 3.55
415 416 6.463995 AAAAGTCCAAGCAATTAGTGTTCA 57.536 33.333 0.00 0.00 0.00 3.18
416 417 6.463995 AAAGTCCAAGCAATTAGTGTTCAA 57.536 33.333 0.00 0.00 0.00 2.69
417 418 6.655078 AAGTCCAAGCAATTAGTGTTCAAT 57.345 33.333 0.00 0.00 0.00 2.57
418 419 7.759489 AAGTCCAAGCAATTAGTGTTCAATA 57.241 32.000 0.00 0.00 0.00 1.90
419 420 7.944729 AGTCCAAGCAATTAGTGTTCAATAT 57.055 32.000 0.00 0.00 0.00 1.28
420 421 7.989826 AGTCCAAGCAATTAGTGTTCAATATC 58.010 34.615 0.00 0.00 0.00 1.63
421 422 7.067494 AGTCCAAGCAATTAGTGTTCAATATCC 59.933 37.037 0.00 0.00 0.00 2.59
422 423 6.038161 TCCAAGCAATTAGTGTTCAATATCCG 59.962 38.462 0.00 0.00 0.00 4.18
423 424 6.201517 CAAGCAATTAGTGTTCAATATCCGG 58.798 40.000 0.00 0.00 0.00 5.14
424 425 5.680619 AGCAATTAGTGTTCAATATCCGGA 58.319 37.500 6.61 6.61 0.00 5.14
425 426 6.299141 AGCAATTAGTGTTCAATATCCGGAT 58.701 36.000 22.95 22.95 0.00 4.18
426 427 7.450074 AGCAATTAGTGTTCAATATCCGGATA 58.550 34.615 25.97 25.97 0.00 2.59
427 428 8.103305 AGCAATTAGTGTTCAATATCCGGATAT 58.897 33.333 27.97 27.97 35.63 1.63
428 429 8.730680 GCAATTAGTGTTCAATATCCGGATATT 58.269 33.333 34.38 34.38 42.86 1.28
441 442 6.920569 ATCCGGATATTGAACACAGTAAAC 57.079 37.500 17.43 0.00 0.00 2.01
442 443 5.180271 TCCGGATATTGAACACAGTAAACC 58.820 41.667 0.00 0.00 0.00 3.27
443 444 4.938832 CCGGATATTGAACACAGTAAACCA 59.061 41.667 0.00 0.00 0.00 3.67
444 445 5.588648 CCGGATATTGAACACAGTAAACCAT 59.411 40.000 0.00 0.00 0.00 3.55
445 446 6.458206 CCGGATATTGAACACAGTAAACCATG 60.458 42.308 0.00 0.00 0.00 3.66
446 447 6.265577 GGATATTGAACACAGTAAACCATGC 58.734 40.000 0.00 0.00 0.00 4.06
447 448 3.617540 TTGAACACAGTAAACCATGCG 57.382 42.857 0.00 0.00 0.00 4.73
448 449 1.265635 TGAACACAGTAAACCATGCGC 59.734 47.619 0.00 0.00 0.00 6.09
449 450 1.535462 GAACACAGTAAACCATGCGCT 59.465 47.619 9.73 0.00 0.00 5.92
450 451 0.874390 ACACAGTAAACCATGCGCTG 59.126 50.000 9.73 4.25 0.00 5.18
451 452 1.155889 CACAGTAAACCATGCGCTGA 58.844 50.000 9.73 0.00 0.00 4.26
452 453 1.129251 CACAGTAAACCATGCGCTGAG 59.871 52.381 9.73 0.00 0.00 3.35
469 470 1.813192 AGCGTAGAGAGCTCCTTGC 59.187 57.895 10.93 13.81 41.83 4.01
470 471 0.967887 AGCGTAGAGAGCTCCTTGCA 60.968 55.000 10.93 0.00 41.83 4.08
471 472 0.103937 GCGTAGAGAGCTCCTTGCAT 59.896 55.000 10.93 0.00 45.94 3.96
472 473 1.850377 CGTAGAGAGCTCCTTGCATG 58.150 55.000 10.93 0.00 45.94 4.06
473 474 1.406898 CGTAGAGAGCTCCTTGCATGA 59.593 52.381 10.93 0.00 45.94 3.07
474 475 2.035704 CGTAGAGAGCTCCTTGCATGAT 59.964 50.000 10.93 0.00 45.94 2.45
475 476 2.914695 AGAGAGCTCCTTGCATGATC 57.085 50.000 10.93 0.00 45.94 2.92
476 477 1.417145 AGAGAGCTCCTTGCATGATCC 59.583 52.381 10.93 0.00 45.94 3.36
477 478 1.140452 GAGAGCTCCTTGCATGATCCA 59.860 52.381 10.93 0.00 45.94 3.41
478 479 1.562942 AGAGCTCCTTGCATGATCCAA 59.437 47.619 10.93 0.00 45.94 3.53
479 480 1.674962 GAGCTCCTTGCATGATCCAAC 59.325 52.381 0.87 0.00 45.94 3.77
480 481 0.379669 GCTCCTTGCATGATCCAACG 59.620 55.000 0.00 0.00 42.31 4.10
481 482 1.019673 CTCCTTGCATGATCCAACGG 58.980 55.000 0.00 0.00 0.00 4.44
482 483 0.394216 TCCTTGCATGATCCAACGGG 60.394 55.000 0.00 0.00 0.00 5.28
483 484 1.386525 CCTTGCATGATCCAACGGGG 61.387 60.000 0.00 0.00 38.37 5.73
500 501 2.702847 GGAATGTATCCGGTGCACC 58.297 57.895 26.78 26.78 38.79 5.01
518 519 2.591715 GGATGCCCGTAGCGCATT 60.592 61.111 11.47 0.00 46.76 3.56
519 520 2.186826 GGATGCCCGTAGCGCATTT 61.187 57.895 11.47 0.00 46.76 2.32
520 521 1.724582 GGATGCCCGTAGCGCATTTT 61.725 55.000 11.47 0.00 46.76 1.82
521 522 0.941542 GATGCCCGTAGCGCATTTTA 59.058 50.000 11.47 0.00 46.76 1.52
522 523 1.332375 GATGCCCGTAGCGCATTTTAA 59.668 47.619 11.47 0.00 46.76 1.52
523 524 1.953686 ATGCCCGTAGCGCATTTTAAT 59.046 42.857 11.47 0.00 44.48 1.40
524 525 3.142951 ATGCCCGTAGCGCATTTTAATA 58.857 40.909 11.47 0.00 44.48 0.98
525 526 3.756434 ATGCCCGTAGCGCATTTTAATAT 59.244 39.130 11.47 0.00 44.48 1.28
526 527 3.488489 GCCCGTAGCGCATTTTAATATG 58.512 45.455 11.47 1.86 0.00 1.78
527 528 3.058501 GCCCGTAGCGCATTTTAATATGT 60.059 43.478 11.47 0.00 0.00 2.29
528 529 4.555906 GCCCGTAGCGCATTTTAATATGTT 60.556 41.667 11.47 0.00 0.00 2.71
529 530 5.144359 CCCGTAGCGCATTTTAATATGTTC 58.856 41.667 11.47 1.15 0.00 3.18
530 531 5.277586 CCCGTAGCGCATTTTAATATGTTCA 60.278 40.000 11.47 0.00 0.00 3.18
531 532 6.195868 CCGTAGCGCATTTTAATATGTTCAA 58.804 36.000 11.47 0.00 0.00 2.69
532 533 6.140108 CCGTAGCGCATTTTAATATGTTCAAC 59.860 38.462 11.47 2.27 0.00 3.18
533 534 6.905076 CGTAGCGCATTTTAATATGTTCAACT 59.095 34.615 11.47 2.31 0.00 3.16
534 535 7.428183 CGTAGCGCATTTTAATATGTTCAACTT 59.572 33.333 11.47 0.00 0.00 2.66
535 536 9.072294 GTAGCGCATTTTAATATGTTCAACTTT 57.928 29.630 11.47 0.00 0.00 2.66
536 537 8.532977 AGCGCATTTTAATATGTTCAACTTTT 57.467 26.923 11.47 0.00 0.00 2.27
537 538 8.987890 AGCGCATTTTAATATGTTCAACTTTTT 58.012 25.926 11.47 0.00 0.00 1.94
561 562 7.481275 TTGAAAGAAAGATCCAAAACATTGC 57.519 32.000 0.00 0.00 0.00 3.56
562 563 6.819284 TGAAAGAAAGATCCAAAACATTGCT 58.181 32.000 0.00 0.00 0.00 3.91
563 564 7.950512 TGAAAGAAAGATCCAAAACATTGCTA 58.049 30.769 0.00 0.00 0.00 3.49
564 565 8.084073 TGAAAGAAAGATCCAAAACATTGCTAG 58.916 33.333 0.00 0.00 0.00 3.42
565 566 7.765695 AAGAAAGATCCAAAACATTGCTAGA 57.234 32.000 0.00 0.00 0.00 2.43
566 567 7.388460 AGAAAGATCCAAAACATTGCTAGAG 57.612 36.000 0.00 0.00 0.00 2.43
567 568 6.376581 AGAAAGATCCAAAACATTGCTAGAGG 59.623 38.462 0.00 0.00 0.00 3.69
568 569 5.184892 AGATCCAAAACATTGCTAGAGGT 57.815 39.130 0.00 0.00 0.00 3.85
569 570 6.313519 AGATCCAAAACATTGCTAGAGGTA 57.686 37.500 0.00 0.00 0.00 3.08
570 571 6.116126 AGATCCAAAACATTGCTAGAGGTAC 58.884 40.000 0.00 0.00 0.00 3.34
571 572 5.235850 TCCAAAACATTGCTAGAGGTACA 57.764 39.130 0.00 0.00 0.00 2.90
572 573 5.626142 TCCAAAACATTGCTAGAGGTACAA 58.374 37.500 0.00 0.00 0.00 2.41
573 574 6.245408 TCCAAAACATTGCTAGAGGTACAAT 58.755 36.000 0.00 0.00 34.42 2.71
574 575 6.719370 TCCAAAACATTGCTAGAGGTACAATT 59.281 34.615 0.00 0.00 31.82 2.32
575 576 7.232534 TCCAAAACATTGCTAGAGGTACAATTT 59.767 33.333 0.00 0.00 31.82 1.82
576 577 7.872483 CCAAAACATTGCTAGAGGTACAATTTT 59.128 33.333 0.00 0.00 31.82 1.82
577 578 9.260002 CAAAACATTGCTAGAGGTACAATTTTT 57.740 29.630 0.00 0.00 36.02 1.94
603 604 9.814899 TTTTTGAAGCAATCTCAAGATACAAAA 57.185 25.926 0.00 0.00 33.73 2.44
604 605 9.814899 TTTTGAAGCAATCTCAAGATACAAAAA 57.185 25.926 0.00 0.00 33.03 1.94
605 606 9.985730 TTTGAAGCAATCTCAAGATACAAAAAT 57.014 25.926 0.00 0.00 33.73 1.82
646 647 9.502091 TGAATAGTACATAACAAAAGTTGAGCT 57.498 29.630 0.00 0.00 0.00 4.09
651 652 9.555727 AGTACATAACAAAAGTTGAGCTTTAGA 57.444 29.630 0.00 0.00 45.91 2.10
656 657 9.696917 ATAACAAAAGTTGAGCTTTAGATTTGG 57.303 29.630 15.19 3.83 45.91 3.28
657 658 5.985530 ACAAAAGTTGAGCTTTAGATTTGGC 59.014 36.000 15.19 0.00 45.91 4.52
658 659 4.790765 AAGTTGAGCTTTAGATTTGGCC 57.209 40.909 0.00 0.00 32.57 5.36
659 660 3.092301 AGTTGAGCTTTAGATTTGGCCC 58.908 45.455 0.00 0.00 0.00 5.80
660 661 1.750193 TGAGCTTTAGATTTGGCCCG 58.250 50.000 0.00 0.00 0.00 6.13
661 662 1.004277 TGAGCTTTAGATTTGGCCCGT 59.996 47.619 0.00 0.00 0.00 5.28
662 663 2.092323 GAGCTTTAGATTTGGCCCGTT 58.908 47.619 0.00 0.00 0.00 4.44
663 664 3.275999 GAGCTTTAGATTTGGCCCGTTA 58.724 45.455 0.00 0.00 0.00 3.18
664 665 3.883489 GAGCTTTAGATTTGGCCCGTTAT 59.117 43.478 0.00 0.00 0.00 1.89
665 666 3.883489 AGCTTTAGATTTGGCCCGTTATC 59.117 43.478 0.00 0.00 0.00 1.75
666 667 3.630312 GCTTTAGATTTGGCCCGTTATCA 59.370 43.478 0.00 0.00 0.00 2.15
667 668 4.497507 GCTTTAGATTTGGCCCGTTATCAC 60.498 45.833 0.00 0.00 0.00 3.06
668 669 2.799126 AGATTTGGCCCGTTATCACA 57.201 45.000 0.00 0.00 0.00 3.58
669 670 3.297134 AGATTTGGCCCGTTATCACAT 57.703 42.857 0.00 0.00 0.00 3.21
670 671 3.631250 AGATTTGGCCCGTTATCACATT 58.369 40.909 0.00 0.00 0.00 2.71
671 672 3.381272 AGATTTGGCCCGTTATCACATTG 59.619 43.478 0.00 0.00 0.00 2.82
672 673 2.498644 TTGGCCCGTTATCACATTGA 57.501 45.000 0.00 0.00 0.00 2.57
673 674 2.498644 TGGCCCGTTATCACATTGAA 57.501 45.000 0.00 0.00 0.00 2.69
674 675 2.364632 TGGCCCGTTATCACATTGAAG 58.635 47.619 0.00 0.00 0.00 3.02
675 676 2.290641 TGGCCCGTTATCACATTGAAGT 60.291 45.455 0.00 0.00 0.00 3.01
676 677 3.055021 TGGCCCGTTATCACATTGAAGTA 60.055 43.478 0.00 0.00 0.00 2.24
677 678 3.942748 GGCCCGTTATCACATTGAAGTAA 59.057 43.478 0.00 0.00 0.00 2.24
678 679 4.396790 GGCCCGTTATCACATTGAAGTAAA 59.603 41.667 0.00 0.00 0.00 2.01
679 680 5.106078 GGCCCGTTATCACATTGAAGTAAAA 60.106 40.000 0.00 0.00 0.00 1.52
680 681 6.383415 GCCCGTTATCACATTGAAGTAAAAA 58.617 36.000 0.00 0.00 0.00 1.94
704 705 7.566858 AAAAATGTATCTCGTGCAATGTTTC 57.433 32.000 0.00 0.00 0.00 2.78
705 706 3.989705 TGTATCTCGTGCAATGTTTCG 57.010 42.857 0.00 0.00 0.00 3.46
706 707 3.580731 TGTATCTCGTGCAATGTTTCGA 58.419 40.909 0.00 0.00 0.00 3.71
707 708 3.991121 TGTATCTCGTGCAATGTTTCGAA 59.009 39.130 0.00 0.00 32.12 3.71
708 709 4.629634 TGTATCTCGTGCAATGTTTCGAAT 59.370 37.500 0.00 0.00 32.12 3.34
709 710 4.685169 ATCTCGTGCAATGTTTCGAATT 57.315 36.364 0.00 0.00 32.12 2.17
710 711 4.481930 TCTCGTGCAATGTTTCGAATTT 57.518 36.364 0.00 0.00 32.12 1.82
711 712 4.854399 TCTCGTGCAATGTTTCGAATTTT 58.146 34.783 0.00 0.00 32.12 1.82
712 713 4.674662 TCTCGTGCAATGTTTCGAATTTTG 59.325 37.500 0.00 4.87 32.12 2.44
713 714 4.602006 TCGTGCAATGTTTCGAATTTTGA 58.398 34.783 15.39 0.00 0.00 2.69
714 715 5.218885 TCGTGCAATGTTTCGAATTTTGAT 58.781 33.333 15.39 0.00 0.00 2.57
715 716 6.374578 TCGTGCAATGTTTCGAATTTTGATA 58.625 32.000 15.39 4.85 0.00 2.15
716 717 7.026562 TCGTGCAATGTTTCGAATTTTGATAT 58.973 30.769 15.39 0.00 0.00 1.63
717 718 7.008176 TCGTGCAATGTTTCGAATTTTGATATG 59.992 33.333 15.39 10.22 0.00 1.78
718 719 7.008176 CGTGCAATGTTTCGAATTTTGATATGA 59.992 33.333 15.39 0.00 0.00 2.15
719 720 8.646356 GTGCAATGTTTCGAATTTTGATATGAA 58.354 29.630 15.39 0.00 0.00 2.57
720 721 9.201127 TGCAATGTTTCGAATTTTGATATGAAA 57.799 25.926 15.39 0.00 0.00 2.69
758 759 9.031360 CATACATTGGTGTTGTATGTACTAGAC 57.969 37.037 13.19 0.00 46.10 2.59
759 760 6.403878 ACATTGGTGTTGTATGTACTAGACC 58.596 40.000 11.94 11.94 42.62 3.85
760 761 6.212791 ACATTGGTGTTGTATGTACTAGACCT 59.787 38.462 17.11 1.57 42.70 3.85
761 762 6.675413 TTGGTGTTGTATGTACTAGACCTT 57.325 37.500 17.11 0.00 42.70 3.50
762 763 6.675413 TGGTGTTGTATGTACTAGACCTTT 57.325 37.500 17.11 0.00 42.70 3.11
763 764 7.069877 TGGTGTTGTATGTACTAGACCTTTT 57.930 36.000 17.11 0.00 42.70 2.27
764 765 7.511268 TGGTGTTGTATGTACTAGACCTTTTT 58.489 34.615 17.11 0.00 42.70 1.94
765 766 7.658575 TGGTGTTGTATGTACTAGACCTTTTTC 59.341 37.037 17.11 0.00 42.70 2.29
766 767 7.658575 GGTGTTGTATGTACTAGACCTTTTTCA 59.341 37.037 11.68 0.00 40.42 2.69
767 768 8.709646 GTGTTGTATGTACTAGACCTTTTTCAG 58.290 37.037 0.00 0.00 0.00 3.02
768 769 8.644216 TGTTGTATGTACTAGACCTTTTTCAGA 58.356 33.333 0.00 0.00 0.00 3.27
769 770 9.654663 GTTGTATGTACTAGACCTTTTTCAGAT 57.345 33.333 0.00 0.00 0.00 2.90
798 799 7.839438 TGAAACGTTTTAAAATGTGATACGG 57.161 32.000 23.06 1.73 38.11 4.02
799 800 6.360148 TGAAACGTTTTAAAATGTGATACGGC 59.640 34.615 23.06 10.31 38.11 5.68
800 801 4.396519 ACGTTTTAAAATGTGATACGGCG 58.603 39.130 22.01 4.80 36.81 6.46
801 802 4.083908 ACGTTTTAAAATGTGATACGGCGT 60.084 37.500 22.01 19.64 36.81 5.68
802 803 4.489493 CGTTTTAAAATGTGATACGGCGTC 59.511 41.667 19.21 3.14 0.00 5.19
803 804 5.624292 GTTTTAAAATGTGATACGGCGTCT 58.376 37.500 19.21 6.76 0.00 4.18
804 805 4.850859 TTAAAATGTGATACGGCGTCTG 57.149 40.909 19.21 0.00 0.00 3.51
805 806 1.651987 AAATGTGATACGGCGTCTGG 58.348 50.000 19.21 0.00 0.00 3.86
806 807 0.810031 AATGTGATACGGCGTCTGGC 60.810 55.000 19.21 6.73 42.51 4.85
825 826 4.218722 CACCGGTGCATACTTCCC 57.781 61.111 24.02 0.00 0.00 3.97
826 827 1.602237 CACCGGTGCATACTTCCCT 59.398 57.895 24.02 0.00 0.00 4.20
827 828 0.744414 CACCGGTGCATACTTCCCTG 60.744 60.000 24.02 0.00 0.00 4.45
828 829 0.907704 ACCGGTGCATACTTCCCTGA 60.908 55.000 6.12 0.00 0.00 3.86
829 830 0.469917 CCGGTGCATACTTCCCTGAT 59.530 55.000 0.00 0.00 0.00 2.90
830 831 1.134098 CCGGTGCATACTTCCCTGATT 60.134 52.381 0.00 0.00 0.00 2.57
831 832 2.643551 CGGTGCATACTTCCCTGATTT 58.356 47.619 0.00 0.00 0.00 2.17
832 833 2.355756 CGGTGCATACTTCCCTGATTTG 59.644 50.000 0.00 0.00 0.00 2.32
833 834 3.620488 GGTGCATACTTCCCTGATTTGA 58.380 45.455 0.00 0.00 0.00 2.69
834 835 3.378427 GGTGCATACTTCCCTGATTTGAC 59.622 47.826 0.00 0.00 0.00 3.18
835 836 4.009675 GTGCATACTTCCCTGATTTGACA 58.990 43.478 0.00 0.00 0.00 3.58
836 837 4.458989 GTGCATACTTCCCTGATTTGACAA 59.541 41.667 0.00 0.00 0.00 3.18
837 838 4.701651 TGCATACTTCCCTGATTTGACAAG 59.298 41.667 0.00 0.00 0.00 3.16
838 839 4.702131 GCATACTTCCCTGATTTGACAAGT 59.298 41.667 0.00 0.00 0.00 3.16
839 840 5.183904 GCATACTTCCCTGATTTGACAAGTT 59.816 40.000 0.00 0.00 0.00 2.66
840 841 6.615088 CATACTTCCCTGATTTGACAAGTTG 58.385 40.000 0.00 0.00 0.00 3.16
841 842 4.536765 ACTTCCCTGATTTGACAAGTTGT 58.463 39.130 8.61 8.61 0.00 3.32
842 843 4.339247 ACTTCCCTGATTTGACAAGTTGTG 59.661 41.667 14.57 0.00 0.00 3.33
843 844 2.622942 TCCCTGATTTGACAAGTTGTGC 59.377 45.455 14.57 5.91 0.00 4.57
844 845 2.361757 CCCTGATTTGACAAGTTGTGCA 59.638 45.455 14.57 8.53 0.00 4.57
845 846 3.374745 CCTGATTTGACAAGTTGTGCAC 58.625 45.455 14.57 10.75 0.00 4.57
846 847 3.374745 CTGATTTGACAAGTTGTGCACC 58.625 45.455 14.57 0.00 0.00 5.01
847 848 2.757314 TGATTTGACAAGTTGTGCACCA 59.243 40.909 14.57 0.00 0.00 4.17
848 849 2.937469 TTTGACAAGTTGTGCACCAG 57.063 45.000 14.57 1.95 0.00 4.00
849 850 1.102154 TTGACAAGTTGTGCACCAGG 58.898 50.000 14.57 1.92 0.00 4.45
850 851 0.034574 TGACAAGTTGTGCACCAGGT 60.035 50.000 14.57 5.40 0.00 4.00
851 852 1.210722 TGACAAGTTGTGCACCAGGTA 59.789 47.619 14.57 0.00 0.00 3.08
852 853 1.602377 GACAAGTTGTGCACCAGGTAC 59.398 52.381 14.57 4.82 0.00 3.34
853 854 1.065053 ACAAGTTGTGCACCAGGTACA 60.065 47.619 15.69 0.00 40.56 2.90
854 855 2.229792 CAAGTTGTGCACCAGGTACAT 58.770 47.619 15.69 0.00 41.91 2.29
855 856 2.185004 AGTTGTGCACCAGGTACATC 57.815 50.000 15.69 0.00 41.91 3.06
856 857 1.165270 GTTGTGCACCAGGTACATCC 58.835 55.000 15.69 0.00 41.91 3.51
857 858 0.037590 TTGTGCACCAGGTACATCCC 59.962 55.000 15.69 0.00 41.91 3.85
858 859 1.130678 TGTGCACCAGGTACATCCCA 61.131 55.000 15.69 0.00 37.18 4.37
859 860 0.676782 GTGCACCAGGTACATCCCAC 60.677 60.000 5.22 0.00 36.75 4.61
860 861 1.130678 TGCACCAGGTACATCCCACA 61.131 55.000 0.00 0.00 36.75 4.17
861 862 0.037590 GCACCAGGTACATCCCACAA 59.962 55.000 0.00 0.00 36.75 3.33
862 863 1.821216 CACCAGGTACATCCCACAAC 58.179 55.000 0.00 0.00 36.75 3.32
863 864 0.696501 ACCAGGTACATCCCACAACC 59.303 55.000 0.00 0.00 36.75 3.77
864 865 0.695924 CCAGGTACATCCCACAACCA 59.304 55.000 0.00 0.00 36.75 3.67
865 866 1.613255 CCAGGTACATCCCACAACCAC 60.613 57.143 0.00 0.00 36.75 4.16
866 867 1.073125 CAGGTACATCCCACAACCACA 59.927 52.381 0.00 0.00 36.75 4.17
867 868 1.777878 AGGTACATCCCACAACCACAA 59.222 47.619 0.00 0.00 36.75 3.33
868 869 1.883926 GGTACATCCCACAACCACAAC 59.116 52.381 0.00 0.00 32.04 3.32
869 870 2.488347 GGTACATCCCACAACCACAACT 60.488 50.000 0.00 0.00 32.04 3.16
870 871 2.452600 ACATCCCACAACCACAACTT 57.547 45.000 0.00 0.00 0.00 2.66
871 872 2.745968 ACATCCCACAACCACAACTTT 58.254 42.857 0.00 0.00 0.00 2.66
872 873 3.904717 ACATCCCACAACCACAACTTTA 58.095 40.909 0.00 0.00 0.00 1.85
873 874 4.479158 ACATCCCACAACCACAACTTTAT 58.521 39.130 0.00 0.00 0.00 1.40
890 891 5.657474 ACTTTATGCAGAGCAAATTCATGG 58.343 37.500 0.00 0.00 43.62 3.66
1031 1032 1.002544 CAACGAGCCCCTTCTCTCTTT 59.997 52.381 0.00 0.00 0.00 2.52
1055 1056 3.023832 CACCACAAAGAAACTGTTCCCT 58.976 45.455 0.00 0.00 33.92 4.20
1086 1087 2.632996 TCTCTTGGTCACACCGATCTTT 59.367 45.455 0.00 0.00 42.58 2.52
1089 1090 2.455674 TGGTCACACCGATCTTTCTG 57.544 50.000 0.00 0.00 42.58 3.02
1374 1375 2.126307 CTCGCCGACTGTGTCCAG 60.126 66.667 0.00 0.00 44.68 3.86
1377 1378 2.970639 GCCGACTGTGTCCAGCTA 59.029 61.111 0.00 0.00 42.81 3.32
1488 1489 1.638388 CCGACTACGTGACGTGCCTA 61.638 60.000 22.16 0.00 41.39 3.93
1589 1590 2.256158 CGTACTCAACGCCGTGGA 59.744 61.111 0.00 0.00 46.10 4.02
1590 1591 1.153901 CGTACTCAACGCCGTGGAT 60.154 57.895 0.00 0.00 46.10 3.41
1595 1596 0.389817 CTCAACGCCGTGGATTCTGA 60.390 55.000 0.00 0.00 0.00 3.27
1684 1706 1.115930 TGCGCTCCTAGAAGGATCCC 61.116 60.000 8.55 0.00 44.81 3.85
2220 2245 5.390145 GGCATCACAAAATCAATCTGTTTGC 60.390 40.000 0.00 0.00 36.01 3.68
2287 2312 5.139435 CAGTGAAGAGTGGTCAGTGAATA 57.861 43.478 0.00 0.00 45.47 1.75
2453 2489 2.097466 CCGAAAAGAATCGACAATGGGG 59.903 50.000 0.00 0.00 45.48 4.96
2455 2491 3.936453 CGAAAAGAATCGACAATGGGGTA 59.064 43.478 0.00 0.00 45.48 3.69
2563 2600 4.715130 TCCCGCCACCACCTAGCT 62.715 66.667 0.00 0.00 0.00 3.32
2644 2681 4.245025 CGTGTACGTACGTATGTGTACT 57.755 45.455 29.05 5.50 42.00 2.73
2645 2682 5.369947 CGTGTACGTACGTATGTGTACTA 57.630 43.478 29.05 6.94 42.00 1.82
2646 2683 5.181084 CGTGTACGTACGTATGTGTACTAC 58.819 45.833 29.05 17.81 42.00 2.73
2665 2702 9.045223 TGTACTACACAAGTATATACGTACTGG 57.955 37.037 17.94 0.00 42.63 4.00
2735 2784 1.514087 CTTGCACACCCATGGATGC 59.486 57.895 21.96 21.96 38.27 3.91
2738 2787 2.420568 GCACACCCATGGATGCCTG 61.421 63.158 15.22 2.22 34.19 4.85
2739 2788 1.303948 CACACCCATGGATGCCTGA 59.696 57.895 15.22 0.00 0.00 3.86
2740 2789 0.106369 CACACCCATGGATGCCTGAT 60.106 55.000 15.22 0.00 0.00 2.90
2741 2790 0.106369 ACACCCATGGATGCCTGATG 60.106 55.000 15.22 0.00 0.00 3.07
2742 2791 1.152610 ACCCATGGATGCCTGATGC 60.153 57.895 15.22 0.00 41.77 3.91
2743 2792 1.906824 CCCATGGATGCCTGATGCC 60.907 63.158 15.22 0.00 40.16 4.40
2744 2793 1.153061 CCATGGATGCCTGATGCCT 59.847 57.895 5.56 0.00 40.16 4.75
2745 2794 0.894184 CCATGGATGCCTGATGCCTC 60.894 60.000 5.56 0.00 40.16 4.70
2746 2795 0.179001 CATGGATGCCTGATGCCTCA 60.179 55.000 0.00 0.00 40.16 3.86
2747 2796 0.178998 ATGGATGCCTGATGCCTCAC 60.179 55.000 0.00 0.00 40.16 3.51
2748 2797 1.225426 GGATGCCTGATGCCTCACA 59.775 57.895 0.00 0.00 40.16 3.58
2766 2815 6.625740 GCCTCACATTTTACAACAGTATGCAT 60.626 38.462 3.79 3.79 42.53 3.96
2852 2901 2.911509 AATGTTGCAGCCGTGGCA 60.912 55.556 14.29 0.00 44.88 4.92
3167 3216 1.302271 GGACCCGAACCAGAACACC 60.302 63.158 0.00 0.00 0.00 4.16
3509 3558 1.679311 CTACTGGCTCAAGGGCACA 59.321 57.895 0.00 0.00 45.79 4.57
3524 3573 1.080093 CACAGGTGTGGCGTACGAT 60.080 57.895 21.65 0.00 42.10 3.73
3548 3597 0.179081 GGCTCTGATCCGTGGTTACC 60.179 60.000 0.00 0.00 0.00 2.85
3576 3625 5.619607 CCTTCGTTTGATGTTTGTTTACTCG 59.380 40.000 0.00 0.00 0.00 4.18
3677 3737 6.992715 AGTGTCATACTTATTATCTTGTGGCC 59.007 38.462 0.00 0.00 35.67 5.36
3678 3738 6.992715 GTGTCATACTTATTATCTTGTGGCCT 59.007 38.462 3.32 0.00 0.00 5.19
3679 3739 7.499232 GTGTCATACTTATTATCTTGTGGCCTT 59.501 37.037 3.32 0.00 0.00 4.35
3680 3740 8.710239 TGTCATACTTATTATCTTGTGGCCTTA 58.290 33.333 3.32 0.00 0.00 2.69
3681 3741 9.209175 GTCATACTTATTATCTTGTGGCCTTAG 57.791 37.037 3.32 0.00 0.00 2.18
3682 3742 8.934697 TCATACTTATTATCTTGTGGCCTTAGT 58.065 33.333 3.32 0.00 0.00 2.24
3703 3763 5.070001 AGTAAGCACAAGCATAAAACCTCA 58.930 37.500 0.00 0.00 45.49 3.86
3705 3765 3.754965 AGCACAAGCATAAAACCTCAGA 58.245 40.909 0.00 0.00 45.49 3.27
3764 3824 4.791411 GCTTGACAATTTTGTAGCCGTTGA 60.791 41.667 6.86 0.00 42.43 3.18
3769 3829 6.419413 TGACAATTTTGTAGCCGTTGATTTTC 59.581 34.615 0.00 0.00 42.43 2.29
3772 3832 7.042791 ACAATTTTGTAGCCGTTGATTTTCTTG 60.043 33.333 0.00 0.00 40.16 3.02
3811 3874 1.133025 CATTTGCTCCCGGATGAACAC 59.867 52.381 0.73 0.00 0.00 3.32
3812 3875 0.608035 TTTGCTCCCGGATGAACACC 60.608 55.000 0.73 0.00 0.00 4.16
4044 4561 3.259123 CCTTTTGCTCTTAATTGCTGGGT 59.741 43.478 0.00 0.00 0.00 4.51
4070 4587 4.412199 CCATCCTGGGACCTAAACATAGAA 59.588 45.833 0.00 0.00 32.67 2.10
4090 4608 9.286170 CATAGAAGGATTTCAGTTCATGATGAT 57.714 33.333 0.00 0.00 37.89 2.45
4206 4727 3.935315 TCTTCAGAGCTCAAACTCCATG 58.065 45.455 17.77 2.52 37.39 3.66
4249 4770 8.637986 AGTCTACTCAAGGTTGATCTGATATTC 58.362 37.037 0.00 0.00 36.46 1.75
4252 4773 7.205515 ACTCAAGGTTGATCTGATATTCCTT 57.794 36.000 11.39 11.39 36.46 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.239217 TGCACCTGATATGAACAGTAGAAT 57.761 37.500 0.00 0.00 34.04 2.40
1 2 5.675684 TGCACCTGATATGAACAGTAGAA 57.324 39.130 0.00 0.00 34.04 2.10
2 3 5.876651 ATGCACCTGATATGAACAGTAGA 57.123 39.130 0.00 0.00 34.04 2.59
4 5 5.934043 GCATATGCACCTGATATGAACAGTA 59.066 40.000 22.84 0.00 41.59 2.74
5 6 4.758674 GCATATGCACCTGATATGAACAGT 59.241 41.667 22.84 0.00 41.59 3.55
21 22 1.001293 TCTGATCTCGGGTGCATATGC 59.999 52.381 21.09 21.09 42.50 3.14
22 23 3.391506 TTCTGATCTCGGGTGCATATG 57.608 47.619 0.00 0.00 0.00 1.78
23 24 3.307269 CCATTCTGATCTCGGGTGCATAT 60.307 47.826 0.00 0.00 0.00 1.78
24 25 2.037641 CCATTCTGATCTCGGGTGCATA 59.962 50.000 0.00 0.00 0.00 3.14
25 26 1.202734 CCATTCTGATCTCGGGTGCAT 60.203 52.381 0.00 0.00 0.00 3.96
26 27 0.178767 CCATTCTGATCTCGGGTGCA 59.821 55.000 0.00 0.00 0.00 4.57
27 28 1.162800 GCCATTCTGATCTCGGGTGC 61.163 60.000 0.00 0.00 0.00 5.01
28 29 0.178767 TGCCATTCTGATCTCGGGTG 59.821 55.000 0.00 0.00 0.00 4.61
29 30 0.467384 CTGCCATTCTGATCTCGGGT 59.533 55.000 0.00 0.00 0.00 5.28
30 31 0.467384 ACTGCCATTCTGATCTCGGG 59.533 55.000 0.00 0.00 0.00 5.14
31 32 2.208431 GAACTGCCATTCTGATCTCGG 58.792 52.381 0.00 0.00 0.00 4.63
32 33 2.897436 TGAACTGCCATTCTGATCTCG 58.103 47.619 0.00 0.00 0.00 4.04
33 34 3.493877 CGATGAACTGCCATTCTGATCTC 59.506 47.826 0.00 0.00 0.00 2.75
34 35 3.464907 CGATGAACTGCCATTCTGATCT 58.535 45.455 0.00 0.00 0.00 2.75
35 36 2.032204 GCGATGAACTGCCATTCTGATC 60.032 50.000 0.00 0.00 0.00 2.92
36 37 1.945394 GCGATGAACTGCCATTCTGAT 59.055 47.619 0.00 0.00 0.00 2.90
37 38 1.065926 AGCGATGAACTGCCATTCTGA 60.066 47.619 0.00 0.00 0.00 3.27
38 39 1.376543 AGCGATGAACTGCCATTCTG 58.623 50.000 0.00 0.00 0.00 3.02
39 40 2.988010 TAGCGATGAACTGCCATTCT 57.012 45.000 0.00 0.00 0.00 2.40
40 41 3.487544 GGTTTAGCGATGAACTGCCATTC 60.488 47.826 8.27 0.00 0.00 2.67
41 42 2.423538 GGTTTAGCGATGAACTGCCATT 59.576 45.455 8.27 0.00 0.00 3.16
42 43 2.017049 GGTTTAGCGATGAACTGCCAT 58.983 47.619 8.27 0.00 0.00 4.40
43 44 1.448985 GGTTTAGCGATGAACTGCCA 58.551 50.000 8.27 0.00 0.00 4.92
44 45 0.733150 GGGTTTAGCGATGAACTGCC 59.267 55.000 8.27 0.00 0.00 4.85
45 46 0.733150 GGGGTTTAGCGATGAACTGC 59.267 55.000 8.27 0.00 0.00 4.40
46 47 2.093447 AGAGGGGTTTAGCGATGAACTG 60.093 50.000 8.27 0.00 0.00 3.16
47 48 2.168728 GAGAGGGGTTTAGCGATGAACT 59.831 50.000 8.27 0.00 0.00 3.01
48 49 2.552031 GAGAGGGGTTTAGCGATGAAC 58.448 52.381 0.00 0.00 0.00 3.18
49 50 1.485066 GGAGAGGGGTTTAGCGATGAA 59.515 52.381 0.00 0.00 0.00 2.57
50 51 1.120530 GGAGAGGGGTTTAGCGATGA 58.879 55.000 0.00 0.00 0.00 2.92
51 52 1.123928 AGGAGAGGGGTTTAGCGATG 58.876 55.000 0.00 0.00 0.00 3.84
52 53 1.763545 GAAGGAGAGGGGTTTAGCGAT 59.236 52.381 0.00 0.00 0.00 4.58
53 54 1.192428 GAAGGAGAGGGGTTTAGCGA 58.808 55.000 0.00 0.00 0.00 4.93
54 55 1.196012 AGAAGGAGAGGGGTTTAGCG 58.804 55.000 0.00 0.00 0.00 4.26
55 56 3.071747 CCATAGAAGGAGAGGGGTTTAGC 59.928 52.174 0.00 0.00 0.00 3.09
56 57 3.071747 GCCATAGAAGGAGAGGGGTTTAG 59.928 52.174 0.00 0.00 0.00 1.85
57 58 3.046374 GCCATAGAAGGAGAGGGGTTTA 58.954 50.000 0.00 0.00 0.00 2.01
58 59 1.847088 GCCATAGAAGGAGAGGGGTTT 59.153 52.381 0.00 0.00 0.00 3.27
59 60 1.274416 TGCCATAGAAGGAGAGGGGTT 60.274 52.381 0.00 0.00 0.00 4.11
60 61 0.343372 TGCCATAGAAGGAGAGGGGT 59.657 55.000 0.00 0.00 0.00 4.95
61 62 1.627834 GATGCCATAGAAGGAGAGGGG 59.372 57.143 0.00 0.00 0.00 4.79
62 63 2.333069 TGATGCCATAGAAGGAGAGGG 58.667 52.381 0.00 0.00 0.00 4.30
63 64 5.189342 ACATATGATGCCATAGAAGGAGAGG 59.811 44.000 10.38 0.00 38.53 3.69
64 65 6.297080 ACATATGATGCCATAGAAGGAGAG 57.703 41.667 10.38 0.00 38.53 3.20
65 66 6.692849 AACATATGATGCCATAGAAGGAGA 57.307 37.500 10.38 0.00 38.53 3.71
66 67 6.820656 GGTAACATATGATGCCATAGAAGGAG 59.179 42.308 14.04 0.00 38.53 3.69
67 68 6.272090 TGGTAACATATGATGCCATAGAAGGA 59.728 38.462 17.04 0.00 46.17 3.36
68 69 6.475504 TGGTAACATATGATGCCATAGAAGG 58.524 40.000 17.04 0.00 46.17 3.46
86 87 2.494870 AGAGTACCCGACATGTGGTAAC 59.505 50.000 14.83 12.22 38.77 2.50
87 88 2.756760 GAGAGTACCCGACATGTGGTAA 59.243 50.000 14.83 0.18 38.77 2.85
88 89 2.025605 AGAGAGTACCCGACATGTGGTA 60.026 50.000 1.15 7.07 36.04 3.25
89 90 1.183549 GAGAGTACCCGACATGTGGT 58.816 55.000 1.15 8.24 38.69 4.16
90 91 1.405821 GAGAGAGTACCCGACATGTGG 59.594 57.143 1.15 0.51 0.00 4.17
91 92 1.405821 GGAGAGAGTACCCGACATGTG 59.594 57.143 1.15 0.00 0.00 3.21
92 93 1.285373 AGGAGAGAGTACCCGACATGT 59.715 52.381 0.00 0.00 0.00 3.21
93 94 2.060050 AGGAGAGAGTACCCGACATG 57.940 55.000 0.00 0.00 0.00 3.21
94 95 2.830651 AAGGAGAGAGTACCCGACAT 57.169 50.000 0.00 0.00 0.00 3.06
95 96 2.444421 GAAAGGAGAGAGTACCCGACA 58.556 52.381 0.00 0.00 0.00 4.35
96 97 1.750206 GGAAAGGAGAGAGTACCCGAC 59.250 57.143 0.00 0.00 0.00 4.79
97 98 1.639628 AGGAAAGGAGAGAGTACCCGA 59.360 52.381 0.00 0.00 0.00 5.14
98 99 2.146920 AGGAAAGGAGAGAGTACCCG 57.853 55.000 0.00 0.00 0.00 5.28
99 100 6.563037 AAATTAGGAAAGGAGAGAGTACCC 57.437 41.667 0.00 0.00 0.00 3.69
100 101 9.549078 CATAAAATTAGGAAAGGAGAGAGTACC 57.451 37.037 0.00 0.00 0.00 3.34
101 102 9.549078 CCATAAAATTAGGAAAGGAGAGAGTAC 57.451 37.037 0.00 0.00 0.00 2.73
102 103 9.280456 ACCATAAAATTAGGAAAGGAGAGAGTA 57.720 33.333 0.00 0.00 0.00 2.59
103 104 8.049721 CACCATAAAATTAGGAAAGGAGAGAGT 58.950 37.037 0.00 0.00 0.00 3.24
104 105 8.049721 ACACCATAAAATTAGGAAAGGAGAGAG 58.950 37.037 0.00 0.00 0.00 3.20
105 106 7.928873 ACACCATAAAATTAGGAAAGGAGAGA 58.071 34.615 0.00 0.00 0.00 3.10
106 107 8.581253 AACACCATAAAATTAGGAAAGGAGAG 57.419 34.615 0.00 0.00 0.00 3.20
107 108 8.390921 AGAACACCATAAAATTAGGAAAGGAGA 58.609 33.333 0.00 0.00 0.00 3.71
108 109 8.581253 AGAACACCATAAAATTAGGAAAGGAG 57.419 34.615 0.00 0.00 0.00 3.69
109 110 9.681062 CTAGAACACCATAAAATTAGGAAAGGA 57.319 33.333 0.00 0.00 0.00 3.36
110 111 8.406297 GCTAGAACACCATAAAATTAGGAAAGG 58.594 37.037 0.00 0.00 0.00 3.11
111 112 9.178758 AGCTAGAACACCATAAAATTAGGAAAG 57.821 33.333 0.00 0.00 0.00 2.62
112 113 9.528489 AAGCTAGAACACCATAAAATTAGGAAA 57.472 29.630 0.00 0.00 0.00 3.13
113 114 9.528489 AAAGCTAGAACACCATAAAATTAGGAA 57.472 29.630 0.00 0.00 0.00 3.36
114 115 8.956426 CAAAGCTAGAACACCATAAAATTAGGA 58.044 33.333 0.00 0.00 0.00 2.94
115 116 8.739972 ACAAAGCTAGAACACCATAAAATTAGG 58.260 33.333 0.00 0.00 0.00 2.69
116 117 9.774742 GACAAAGCTAGAACACCATAAAATTAG 57.225 33.333 0.00 0.00 0.00 1.73
117 118 8.736244 GGACAAAGCTAGAACACCATAAAATTA 58.264 33.333 0.00 0.00 0.00 1.40
118 119 7.232534 TGGACAAAGCTAGAACACCATAAAATT 59.767 33.333 0.00 0.00 0.00 1.82
119 120 6.719370 TGGACAAAGCTAGAACACCATAAAAT 59.281 34.615 0.00 0.00 0.00 1.82
120 121 6.065374 TGGACAAAGCTAGAACACCATAAAA 58.935 36.000 0.00 0.00 0.00 1.52
121 122 5.626142 TGGACAAAGCTAGAACACCATAAA 58.374 37.500 0.00 0.00 0.00 1.40
122 123 5.235850 TGGACAAAGCTAGAACACCATAA 57.764 39.130 0.00 0.00 0.00 1.90
123 124 4.901197 TGGACAAAGCTAGAACACCATA 57.099 40.909 0.00 0.00 0.00 2.74
124 125 3.788227 TGGACAAAGCTAGAACACCAT 57.212 42.857 0.00 0.00 0.00 3.55
125 126 3.569194 TTGGACAAAGCTAGAACACCA 57.431 42.857 0.00 0.00 0.00 4.17
126 127 4.489679 CTTTGGACAAAGCTAGAACACC 57.510 45.455 11.40 0.00 40.94 4.16
137 138 9.508642 ACCTTTAAAATTTTGACTTTGGACAAA 57.491 25.926 13.76 1.56 35.91 2.83
138 139 9.508642 AACCTTTAAAATTTTGACTTTGGACAA 57.491 25.926 13.76 0.00 0.00 3.18
139 140 8.940952 CAACCTTTAAAATTTTGACTTTGGACA 58.059 29.630 13.76 0.00 0.00 4.02
140 141 9.157104 TCAACCTTTAAAATTTTGACTTTGGAC 57.843 29.630 13.76 0.00 0.00 4.02
141 142 9.157104 GTCAACCTTTAAAATTTTGACTTTGGA 57.843 29.630 13.76 1.80 41.78 3.53
211 212 9.520515 ACATCTACAAGACCAATTAGTTTCAAT 57.479 29.630 0.00 0.00 0.00 2.57
212 213 8.918202 ACATCTACAAGACCAATTAGTTTCAA 57.082 30.769 0.00 0.00 0.00 2.69
213 214 8.783093 CAACATCTACAAGACCAATTAGTTTCA 58.217 33.333 0.00 0.00 0.00 2.69
214 215 8.237267 CCAACATCTACAAGACCAATTAGTTTC 58.763 37.037 0.00 0.00 0.00 2.78
215 216 7.309194 GCCAACATCTACAAGACCAATTAGTTT 60.309 37.037 0.00 0.00 0.00 2.66
216 217 6.151144 GCCAACATCTACAAGACCAATTAGTT 59.849 38.462 0.00 0.00 0.00 2.24
217 218 5.648092 GCCAACATCTACAAGACCAATTAGT 59.352 40.000 0.00 0.00 0.00 2.24
218 219 5.647658 TGCCAACATCTACAAGACCAATTAG 59.352 40.000 0.00 0.00 0.00 1.73
219 220 5.565509 TGCCAACATCTACAAGACCAATTA 58.434 37.500 0.00 0.00 0.00 1.40
220 221 4.406456 TGCCAACATCTACAAGACCAATT 58.594 39.130 0.00 0.00 0.00 2.32
221 222 4.032960 TGCCAACATCTACAAGACCAAT 57.967 40.909 0.00 0.00 0.00 3.16
222 223 3.500448 TGCCAACATCTACAAGACCAA 57.500 42.857 0.00 0.00 0.00 3.67
223 224 3.719268 ATGCCAACATCTACAAGACCA 57.281 42.857 0.00 0.00 0.00 4.02
224 225 5.391312 AAAATGCCAACATCTACAAGACC 57.609 39.130 0.00 0.00 34.62 3.85
244 245 8.610248 TTACATTCGACCAAGTCTATGAAAAA 57.390 30.769 11.34 3.69 31.51 1.94
245 246 8.610248 TTTACATTCGACCAAGTCTATGAAAA 57.390 30.769 11.34 5.29 31.51 2.29
246 247 8.092068 TCTTTACATTCGACCAAGTCTATGAAA 58.908 33.333 11.34 7.91 31.51 2.69
247 248 7.608153 TCTTTACATTCGACCAAGTCTATGAA 58.392 34.615 11.34 1.54 31.51 2.57
248 249 7.165460 TCTTTACATTCGACCAAGTCTATGA 57.835 36.000 11.34 0.00 31.51 2.15
249 250 7.545965 ACTTCTTTACATTCGACCAAGTCTATG 59.454 37.037 0.00 5.62 32.49 2.23
250 251 7.612677 ACTTCTTTACATTCGACCAAGTCTAT 58.387 34.615 0.00 0.00 0.00 1.98
251 252 6.989659 ACTTCTTTACATTCGACCAAGTCTA 58.010 36.000 0.00 0.00 0.00 2.59
252 253 5.855045 ACTTCTTTACATTCGACCAAGTCT 58.145 37.500 0.00 0.00 0.00 3.24
253 254 6.541111 AACTTCTTTACATTCGACCAAGTC 57.459 37.500 0.00 0.00 0.00 3.01
254 255 6.540914 TCAAACTTCTTTACATTCGACCAAGT 59.459 34.615 0.00 0.00 0.00 3.16
255 256 6.954944 TCAAACTTCTTTACATTCGACCAAG 58.045 36.000 0.00 0.00 0.00 3.61
256 257 6.928979 TCAAACTTCTTTACATTCGACCAA 57.071 33.333 0.00 0.00 0.00 3.67
257 258 7.227711 TCAATCAAACTTCTTTACATTCGACCA 59.772 33.333 0.00 0.00 0.00 4.02
258 259 7.581476 TCAATCAAACTTCTTTACATTCGACC 58.419 34.615 0.00 0.00 0.00 4.79
259 260 7.746475 CCTCAATCAAACTTCTTTACATTCGAC 59.254 37.037 0.00 0.00 0.00 4.20
260 261 7.659799 TCCTCAATCAAACTTCTTTACATTCGA 59.340 33.333 0.00 0.00 0.00 3.71
261 262 7.746475 GTCCTCAATCAAACTTCTTTACATTCG 59.254 37.037 0.00 0.00 0.00 3.34
262 263 8.567948 TGTCCTCAATCAAACTTCTTTACATTC 58.432 33.333 0.00 0.00 0.00 2.67
263 264 8.463930 TGTCCTCAATCAAACTTCTTTACATT 57.536 30.769 0.00 0.00 0.00 2.71
264 265 8.463930 TTGTCCTCAATCAAACTTCTTTACAT 57.536 30.769 0.00 0.00 0.00 2.29
265 266 7.873719 TTGTCCTCAATCAAACTTCTTTACA 57.126 32.000 0.00 0.00 0.00 2.41
266 267 8.561932 GTTTGTCCTCAATCAAACTTCTTTAC 57.438 34.615 11.75 0.00 45.36 2.01
275 276 9.097257 GAATTTTGAAGTTTGTCCTCAATCAAA 57.903 29.630 0.00 0.00 37.82 2.69
276 277 8.256605 TGAATTTTGAAGTTTGTCCTCAATCAA 58.743 29.630 0.00 0.00 32.09 2.57
277 278 7.780064 TGAATTTTGAAGTTTGTCCTCAATCA 58.220 30.769 0.00 0.00 33.32 2.57
278 279 8.647143 TTGAATTTTGAAGTTTGTCCTCAATC 57.353 30.769 0.00 0.00 33.32 2.67
279 280 8.882736 GTTTGAATTTTGAAGTTTGTCCTCAAT 58.117 29.630 0.00 0.00 33.32 2.57
280 281 7.875041 TGTTTGAATTTTGAAGTTTGTCCTCAA 59.125 29.630 0.00 0.00 0.00 3.02
281 282 7.382110 TGTTTGAATTTTGAAGTTTGTCCTCA 58.618 30.769 0.00 0.00 0.00 3.86
282 283 7.826260 TGTTTGAATTTTGAAGTTTGTCCTC 57.174 32.000 0.00 0.00 0.00 3.71
283 284 8.791327 ATTGTTTGAATTTTGAAGTTTGTCCT 57.209 26.923 0.00 0.00 0.00 3.85
284 285 9.838975 AAATTGTTTGAATTTTGAAGTTTGTCC 57.161 25.926 0.00 0.00 0.00 4.02
300 301 9.950680 GTACTCTTTCAATCTCAAATTGTTTGA 57.049 29.630 5.17 5.17 46.68 2.69
301 302 9.956720 AGTACTCTTTCAATCTCAAATTGTTTG 57.043 29.630 0.00 0.00 41.96 2.93
319 320 9.852091 CCGTGAGTAAAATTAGTTAGTACTCTT 57.148 33.333 16.28 0.00 40.76 2.85
320 321 9.018582 ACCGTGAGTAAAATTAGTTAGTACTCT 57.981 33.333 16.28 0.00 40.76 3.24
321 322 9.631452 AACCGTGAGTAAAATTAGTTAGTACTC 57.369 33.333 0.00 11.73 40.61 2.59
322 323 9.631452 GAACCGTGAGTAAAATTAGTTAGTACT 57.369 33.333 0.00 0.00 38.44 2.73
323 324 9.631452 AGAACCGTGAGTAAAATTAGTTAGTAC 57.369 33.333 0.00 0.00 0.00 2.73
332 333 8.196103 GGAGTAGATAGAACCGTGAGTAAAATT 58.804 37.037 0.00 0.00 0.00 1.82
333 334 7.560626 AGGAGTAGATAGAACCGTGAGTAAAAT 59.439 37.037 0.00 0.00 0.00 1.82
334 335 6.888632 AGGAGTAGATAGAACCGTGAGTAAAA 59.111 38.462 0.00 0.00 0.00 1.52
335 336 6.421485 AGGAGTAGATAGAACCGTGAGTAAA 58.579 40.000 0.00 0.00 0.00 2.01
336 337 5.999044 AGGAGTAGATAGAACCGTGAGTAA 58.001 41.667 0.00 0.00 0.00 2.24
337 338 5.627182 AGGAGTAGATAGAACCGTGAGTA 57.373 43.478 0.00 0.00 0.00 2.59
338 339 4.506937 AGGAGTAGATAGAACCGTGAGT 57.493 45.455 0.00 0.00 0.00 3.41
339 340 5.613329 ACTAGGAGTAGATAGAACCGTGAG 58.387 45.833 0.00 0.00 0.00 3.51
340 341 5.129980 TGACTAGGAGTAGATAGAACCGTGA 59.870 44.000 0.00 0.00 0.00 4.35
341 342 5.366460 TGACTAGGAGTAGATAGAACCGTG 58.634 45.833 0.00 0.00 0.00 4.94
342 343 5.627182 TGACTAGGAGTAGATAGAACCGT 57.373 43.478 0.00 0.00 0.00 4.83
343 344 6.231951 TGATGACTAGGAGTAGATAGAACCG 58.768 44.000 0.00 0.00 0.00 4.44
344 345 8.107095 AGATGATGACTAGGAGTAGATAGAACC 58.893 40.741 0.00 0.00 0.00 3.62
349 350 9.898152 CACATAGATGATGACTAGGAGTAGATA 57.102 37.037 0.00 0.00 39.06 1.98
350 351 7.833682 CCACATAGATGATGACTAGGAGTAGAT 59.166 40.741 0.00 0.00 39.06 1.98
351 352 7.171653 CCACATAGATGATGACTAGGAGTAGA 58.828 42.308 0.00 0.00 39.06 2.59
352 353 6.945435 ACCACATAGATGATGACTAGGAGTAG 59.055 42.308 0.00 0.00 39.06 2.57
353 354 6.853490 ACCACATAGATGATGACTAGGAGTA 58.147 40.000 0.00 0.00 39.06 2.59
354 355 5.710646 ACCACATAGATGATGACTAGGAGT 58.289 41.667 0.00 0.00 39.06 3.85
355 356 5.772169 TGACCACATAGATGATGACTAGGAG 59.228 44.000 0.00 0.00 39.06 3.69
356 357 5.705400 TGACCACATAGATGATGACTAGGA 58.295 41.667 0.00 0.00 39.06 2.94
357 358 6.410942 TTGACCACATAGATGATGACTAGG 57.589 41.667 0.00 0.00 39.06 3.02
358 359 5.925397 GCTTGACCACATAGATGATGACTAG 59.075 44.000 0.00 0.00 39.06 2.57
359 360 5.600069 AGCTTGACCACATAGATGATGACTA 59.400 40.000 0.00 0.00 39.06 2.59
360 361 4.408270 AGCTTGACCACATAGATGATGACT 59.592 41.667 0.00 0.00 39.06 3.41
361 362 4.701765 AGCTTGACCACATAGATGATGAC 58.298 43.478 0.00 0.00 39.06 3.06
362 363 6.484364 TTAGCTTGACCACATAGATGATGA 57.516 37.500 0.00 0.00 39.06 2.92
363 364 5.178996 GCTTAGCTTGACCACATAGATGATG 59.821 44.000 0.00 0.00 41.79 3.07
364 365 5.071519 AGCTTAGCTTGACCACATAGATGAT 59.928 40.000 0.00 0.00 33.89 2.45
365 366 4.406972 AGCTTAGCTTGACCACATAGATGA 59.593 41.667 0.00 0.00 33.89 2.92
366 367 4.701765 AGCTTAGCTTGACCACATAGATG 58.298 43.478 0.00 0.00 33.89 2.90
367 368 6.485830 TTAGCTTAGCTTGACCACATAGAT 57.514 37.500 13.44 0.00 40.44 1.98
368 369 5.932619 TTAGCTTAGCTTGACCACATAGA 57.067 39.130 13.44 0.00 40.44 1.98
369 370 8.662781 TTTATTAGCTTAGCTTGACCACATAG 57.337 34.615 13.44 0.00 40.44 2.23
370 371 9.109393 CTTTTATTAGCTTAGCTTGACCACATA 57.891 33.333 13.44 0.00 40.44 2.29
371 372 7.611855 ACTTTTATTAGCTTAGCTTGACCACAT 59.388 33.333 13.44 0.00 40.44 3.21
372 373 6.940298 ACTTTTATTAGCTTAGCTTGACCACA 59.060 34.615 13.44 0.00 40.44 4.17
373 374 7.379098 ACTTTTATTAGCTTAGCTTGACCAC 57.621 36.000 13.44 0.00 40.44 4.16
374 375 6.598064 GGACTTTTATTAGCTTAGCTTGACCA 59.402 38.462 13.44 0.00 40.44 4.02
375 376 6.598064 TGGACTTTTATTAGCTTAGCTTGACC 59.402 38.462 13.44 4.57 40.44 4.02
376 377 7.611213 TGGACTTTTATTAGCTTAGCTTGAC 57.389 36.000 13.44 0.00 40.44 3.18
377 378 7.148239 GCTTGGACTTTTATTAGCTTAGCTTGA 60.148 37.037 13.44 1.85 40.44 3.02
378 379 6.969473 GCTTGGACTTTTATTAGCTTAGCTTG 59.031 38.462 13.44 0.00 40.44 4.01
379 380 6.659242 TGCTTGGACTTTTATTAGCTTAGCTT 59.341 34.615 13.44 0.00 40.44 3.74
380 381 6.180472 TGCTTGGACTTTTATTAGCTTAGCT 58.820 36.000 12.67 12.67 43.41 3.32
381 382 6.436843 TGCTTGGACTTTTATTAGCTTAGC 57.563 37.500 0.00 0.00 0.00 3.09
384 385 9.025041 ACTAATTGCTTGGACTTTTATTAGCTT 57.975 29.630 0.00 0.00 30.86 3.74
385 386 8.462016 CACTAATTGCTTGGACTTTTATTAGCT 58.538 33.333 0.00 0.00 30.86 3.32
386 387 8.244113 ACACTAATTGCTTGGACTTTTATTAGC 58.756 33.333 0.00 0.00 30.86 3.09
389 390 8.637986 TGAACACTAATTGCTTGGACTTTTATT 58.362 29.630 0.00 0.00 0.00 1.40
390 391 8.177119 TGAACACTAATTGCTTGGACTTTTAT 57.823 30.769 0.00 0.00 0.00 1.40
391 392 7.575414 TGAACACTAATTGCTTGGACTTTTA 57.425 32.000 0.00 0.00 0.00 1.52
392 393 6.463995 TGAACACTAATTGCTTGGACTTTT 57.536 33.333 0.00 0.00 0.00 2.27
393 394 6.463995 TTGAACACTAATTGCTTGGACTTT 57.536 33.333 0.00 0.00 0.00 2.66
394 395 6.655078 ATTGAACACTAATTGCTTGGACTT 57.345 33.333 0.00 0.00 0.00 3.01
395 396 7.067494 GGATATTGAACACTAATTGCTTGGACT 59.933 37.037 0.00 0.00 0.00 3.85
396 397 7.196331 GGATATTGAACACTAATTGCTTGGAC 58.804 38.462 0.00 0.00 0.00 4.02
397 398 6.038161 CGGATATTGAACACTAATTGCTTGGA 59.962 38.462 0.00 0.00 0.00 3.53
398 399 6.201517 CGGATATTGAACACTAATTGCTTGG 58.798 40.000 0.00 0.00 0.00 3.61
399 400 6.038161 TCCGGATATTGAACACTAATTGCTTG 59.962 38.462 0.00 0.00 0.00 4.01
400 401 6.119536 TCCGGATATTGAACACTAATTGCTT 58.880 36.000 0.00 0.00 0.00 3.91
401 402 5.680619 TCCGGATATTGAACACTAATTGCT 58.319 37.500 0.00 0.00 0.00 3.91
402 403 6.560253 ATCCGGATATTGAACACTAATTGC 57.440 37.500 17.43 0.00 0.00 3.56
415 416 9.052759 GTTTACTGTGTTCAATATCCGGATATT 57.947 33.333 34.38 34.38 42.86 1.28
416 417 7.660208 GGTTTACTGTGTTCAATATCCGGATAT 59.340 37.037 27.97 27.97 35.63 1.63
417 418 6.987992 GGTTTACTGTGTTCAATATCCGGATA 59.012 38.462 25.97 25.97 0.00 2.59
418 419 5.820947 GGTTTACTGTGTTCAATATCCGGAT 59.179 40.000 22.95 22.95 0.00 4.18
419 420 5.180271 GGTTTACTGTGTTCAATATCCGGA 58.820 41.667 6.61 6.61 0.00 5.14
420 421 4.938832 TGGTTTACTGTGTTCAATATCCGG 59.061 41.667 0.00 0.00 0.00 5.14
421 422 6.486248 CATGGTTTACTGTGTTCAATATCCG 58.514 40.000 0.00 0.00 0.00 4.18
422 423 6.265577 GCATGGTTTACTGTGTTCAATATCC 58.734 40.000 0.00 0.00 0.00 2.59
423 424 5.965334 CGCATGGTTTACTGTGTTCAATATC 59.035 40.000 0.00 0.00 0.00 1.63
424 425 5.676079 GCGCATGGTTTACTGTGTTCAATAT 60.676 40.000 0.30 0.00 0.00 1.28
425 426 4.378978 GCGCATGGTTTACTGTGTTCAATA 60.379 41.667 0.30 0.00 0.00 1.90
426 427 3.611530 GCGCATGGTTTACTGTGTTCAAT 60.612 43.478 0.30 0.00 0.00 2.57
427 428 2.287308 GCGCATGGTTTACTGTGTTCAA 60.287 45.455 0.30 0.00 0.00 2.69
428 429 1.265635 GCGCATGGTTTACTGTGTTCA 59.734 47.619 0.30 0.00 0.00 3.18
429 430 1.535462 AGCGCATGGTTTACTGTGTTC 59.465 47.619 11.47 0.00 0.00 3.18
430 431 1.266718 CAGCGCATGGTTTACTGTGTT 59.733 47.619 11.47 0.00 0.00 3.32
431 432 0.874390 CAGCGCATGGTTTACTGTGT 59.126 50.000 11.47 0.00 0.00 3.72
432 433 1.129251 CTCAGCGCATGGTTTACTGTG 59.871 52.381 11.47 0.00 0.00 3.66
433 434 1.442769 CTCAGCGCATGGTTTACTGT 58.557 50.000 11.47 0.00 0.00 3.55
434 435 0.097674 GCTCAGCGCATGGTTTACTG 59.902 55.000 11.47 0.00 38.92 2.74
435 436 2.471255 GCTCAGCGCATGGTTTACT 58.529 52.632 11.47 0.00 38.92 2.24
451 452 0.967887 TGCAAGGAGCTCTCTACGCT 60.968 55.000 14.64 0.00 45.94 5.07
452 453 0.103937 ATGCAAGGAGCTCTCTACGC 59.896 55.000 14.64 14.50 45.94 4.42
453 454 1.406898 TCATGCAAGGAGCTCTCTACG 59.593 52.381 14.64 5.60 45.94 3.51
454 455 3.554752 GGATCATGCAAGGAGCTCTCTAC 60.555 52.174 14.64 6.04 45.94 2.59
455 456 2.632028 GGATCATGCAAGGAGCTCTCTA 59.368 50.000 14.64 0.00 45.94 2.43
456 457 1.417145 GGATCATGCAAGGAGCTCTCT 59.583 52.381 14.64 6.28 45.94 3.10
457 458 1.140452 TGGATCATGCAAGGAGCTCTC 59.860 52.381 14.64 3.76 45.94 3.20
458 459 1.210538 TGGATCATGCAAGGAGCTCT 58.789 50.000 14.64 0.00 45.94 4.09
459 460 1.674962 GTTGGATCATGCAAGGAGCTC 59.325 52.381 4.71 4.71 45.94 4.09
460 461 1.760192 GTTGGATCATGCAAGGAGCT 58.240 50.000 6.90 0.00 45.94 4.09
461 462 0.379669 CGTTGGATCATGCAAGGAGC 59.620 55.000 5.72 0.00 45.96 4.70
462 463 1.019673 CCGTTGGATCATGCAAGGAG 58.980 55.000 12.69 0.34 35.98 3.69
463 464 0.394216 CCCGTTGGATCATGCAAGGA 60.394 55.000 12.69 0.00 35.98 3.36
464 465 1.386525 CCCCGTTGGATCATGCAAGG 61.387 60.000 4.69 4.69 34.16 3.61
465 466 0.394216 TCCCCGTTGGATCATGCAAG 60.394 55.000 0.00 0.00 38.61 4.01
466 467 0.038890 TTCCCCGTTGGATCATGCAA 59.961 50.000 0.00 0.00 44.66 4.08
467 468 0.258484 ATTCCCCGTTGGATCATGCA 59.742 50.000 0.00 0.00 44.66 3.96
468 469 0.670162 CATTCCCCGTTGGATCATGC 59.330 55.000 0.00 0.00 44.66 4.06
469 470 2.057137 ACATTCCCCGTTGGATCATG 57.943 50.000 0.00 0.00 44.66 3.07
470 471 3.244911 GGATACATTCCCCGTTGGATCAT 60.245 47.826 0.00 0.00 44.66 2.45
471 472 2.105821 GGATACATTCCCCGTTGGATCA 59.894 50.000 0.00 0.00 44.66 2.92
472 473 2.779506 GGATACATTCCCCGTTGGATC 58.220 52.381 0.00 0.00 44.66 3.36
473 474 1.071699 CGGATACATTCCCCGTTGGAT 59.928 52.381 0.00 0.00 44.66 3.41
474 475 0.466543 CGGATACATTCCCCGTTGGA 59.533 55.000 0.00 0.00 42.06 3.53
475 476 0.534203 CCGGATACATTCCCCGTTGG 60.534 60.000 0.00 0.00 42.06 3.77
476 477 0.179468 ACCGGATACATTCCCCGTTG 59.821 55.000 9.46 0.00 42.06 4.10
477 478 0.179468 CACCGGATACATTCCCCGTT 59.821 55.000 9.46 0.00 42.06 4.44
478 479 1.827394 CACCGGATACATTCCCCGT 59.173 57.895 9.46 0.00 42.06 5.28
479 480 1.597027 GCACCGGATACATTCCCCG 60.597 63.158 9.46 0.00 42.06 5.73
480 481 0.818040 GTGCACCGGATACATTCCCC 60.818 60.000 9.46 0.00 42.06 4.81
481 482 0.818040 GGTGCACCGGATACATTCCC 60.818 60.000 22.49 0.00 42.06 3.97
482 483 2.702847 GGTGCACCGGATACATTCC 58.297 57.895 22.49 0.00 41.59 3.01
505 506 3.058501 ACATATTAAAATGCGCTACGGGC 60.059 43.478 9.73 0.00 41.94 6.13
506 507 4.742438 ACATATTAAAATGCGCTACGGG 57.258 40.909 9.73 0.00 0.00 5.28
507 508 5.743467 TGAACATATTAAAATGCGCTACGG 58.257 37.500 9.73 0.00 0.00 4.02
508 509 6.905076 AGTTGAACATATTAAAATGCGCTACG 59.095 34.615 9.73 0.00 0.00 3.51
509 510 8.614994 AAGTTGAACATATTAAAATGCGCTAC 57.385 30.769 9.73 0.00 0.00 3.58
510 511 9.632807 AAAAGTTGAACATATTAAAATGCGCTA 57.367 25.926 9.73 0.00 0.00 4.26
511 512 8.532977 AAAAGTTGAACATATTAAAATGCGCT 57.467 26.923 9.73 0.00 0.00 5.92
535 536 8.397148 GCAATGTTTTGGATCTTTCTTTCAAAA 58.603 29.630 0.00 0.00 35.71 2.44
536 537 7.769970 AGCAATGTTTTGGATCTTTCTTTCAAA 59.230 29.630 0.00 0.00 33.22 2.69
537 538 7.274447 AGCAATGTTTTGGATCTTTCTTTCAA 58.726 30.769 0.00 0.00 33.22 2.69
538 539 6.819284 AGCAATGTTTTGGATCTTTCTTTCA 58.181 32.000 0.00 0.00 33.22 2.69
539 540 8.299570 TCTAGCAATGTTTTGGATCTTTCTTTC 58.700 33.333 0.00 0.00 33.22 2.62
540 541 8.181904 TCTAGCAATGTTTTGGATCTTTCTTT 57.818 30.769 0.00 0.00 33.22 2.52
541 542 7.094032 CCTCTAGCAATGTTTTGGATCTTTCTT 60.094 37.037 0.00 0.00 33.22 2.52
542 543 6.376581 CCTCTAGCAATGTTTTGGATCTTTCT 59.623 38.462 0.00 0.00 33.22 2.52
543 544 6.151817 ACCTCTAGCAATGTTTTGGATCTTTC 59.848 38.462 0.00 0.00 33.22 2.62
544 545 6.012745 ACCTCTAGCAATGTTTTGGATCTTT 58.987 36.000 0.00 0.00 33.22 2.52
545 546 5.574188 ACCTCTAGCAATGTTTTGGATCTT 58.426 37.500 0.00 0.00 33.22 2.40
546 547 5.184892 ACCTCTAGCAATGTTTTGGATCT 57.815 39.130 0.00 0.00 33.22 2.75
547 548 5.880332 TGTACCTCTAGCAATGTTTTGGATC 59.120 40.000 0.00 0.00 33.22 3.36
548 549 5.815581 TGTACCTCTAGCAATGTTTTGGAT 58.184 37.500 0.00 0.00 33.22 3.41
549 550 5.235850 TGTACCTCTAGCAATGTTTTGGA 57.764 39.130 0.00 0.00 33.22 3.53
550 551 5.957842 TTGTACCTCTAGCAATGTTTTGG 57.042 39.130 0.00 0.00 33.22 3.28
551 552 8.816640 AAAATTGTACCTCTAGCAATGTTTTG 57.183 30.769 0.00 0.00 33.68 2.44
577 578 9.814899 TTTTGTATCTTGAGATTGCTTCAAAAA 57.185 25.926 0.00 0.00 36.05 1.94
578 579 9.814899 TTTTTGTATCTTGAGATTGCTTCAAAA 57.185 25.926 0.00 7.38 36.05 2.44
579 580 9.985730 ATTTTTGTATCTTGAGATTGCTTCAAA 57.014 25.926 0.00 2.72 36.05 2.69
620 621 9.502091 AGCTCAACTTTTGTTATGTACTATTCA 57.498 29.630 0.00 0.00 41.35 2.57
625 626 9.555727 TCTAAAGCTCAACTTTTGTTATGTACT 57.444 29.630 0.00 0.00 46.73 2.73
630 631 9.696917 CCAAATCTAAAGCTCAACTTTTGTTAT 57.303 29.630 0.00 0.00 46.73 1.89
631 632 7.651704 GCCAAATCTAAAGCTCAACTTTTGTTA 59.348 33.333 0.00 0.00 46.73 2.41
632 633 6.479990 GCCAAATCTAAAGCTCAACTTTTGTT 59.520 34.615 0.00 0.00 46.73 2.83
633 634 5.985530 GCCAAATCTAAAGCTCAACTTTTGT 59.014 36.000 0.00 0.00 46.73 2.83
634 635 5.406477 GGCCAAATCTAAAGCTCAACTTTTG 59.594 40.000 0.00 0.00 46.73 2.44
635 636 5.511373 GGGCCAAATCTAAAGCTCAACTTTT 60.511 40.000 4.39 0.00 46.73 2.27
637 638 3.511540 GGGCCAAATCTAAAGCTCAACTT 59.488 43.478 4.39 0.00 41.70 2.66
638 639 3.092301 GGGCCAAATCTAAAGCTCAACT 58.908 45.455 4.39 0.00 0.00 3.16
639 640 2.159379 CGGGCCAAATCTAAAGCTCAAC 60.159 50.000 4.39 0.00 0.00 3.18
640 641 2.091541 CGGGCCAAATCTAAAGCTCAA 58.908 47.619 4.39 0.00 0.00 3.02
641 642 1.004277 ACGGGCCAAATCTAAAGCTCA 59.996 47.619 4.39 0.00 0.00 4.26
642 643 1.751437 ACGGGCCAAATCTAAAGCTC 58.249 50.000 4.39 0.00 0.00 4.09
643 644 2.215942 AACGGGCCAAATCTAAAGCT 57.784 45.000 4.39 0.00 0.00 3.74
644 645 3.630312 TGATAACGGGCCAAATCTAAAGC 59.370 43.478 4.39 0.00 0.00 3.51
645 646 4.638421 TGTGATAACGGGCCAAATCTAAAG 59.362 41.667 4.39 0.00 0.00 1.85
646 647 4.590918 TGTGATAACGGGCCAAATCTAAA 58.409 39.130 4.39 0.00 0.00 1.85
647 648 4.223556 TGTGATAACGGGCCAAATCTAA 57.776 40.909 4.39 0.00 0.00 2.10
648 649 3.916359 TGTGATAACGGGCCAAATCTA 57.084 42.857 4.39 0.00 0.00 1.98
649 650 2.799126 TGTGATAACGGGCCAAATCT 57.201 45.000 4.39 0.00 0.00 2.40
650 651 3.380004 TCAATGTGATAACGGGCCAAATC 59.620 43.478 4.39 3.47 0.00 2.17
651 652 3.360867 TCAATGTGATAACGGGCCAAAT 58.639 40.909 4.39 0.00 0.00 2.32
652 653 2.796557 TCAATGTGATAACGGGCCAAA 58.203 42.857 4.39 0.00 0.00 3.28
653 654 2.498644 TCAATGTGATAACGGGCCAA 57.501 45.000 4.39 0.00 0.00 4.52
654 655 2.290641 ACTTCAATGTGATAACGGGCCA 60.291 45.455 4.39 0.00 0.00 5.36
655 656 2.365582 ACTTCAATGTGATAACGGGCC 58.634 47.619 0.00 0.00 0.00 5.80
656 657 5.554822 TTTACTTCAATGTGATAACGGGC 57.445 39.130 0.00 0.00 0.00 6.13
680 681 6.305399 CGAAACATTGCACGAGATACATTTTT 59.695 34.615 0.00 0.00 0.00 1.94
681 682 5.794945 CGAAACATTGCACGAGATACATTTT 59.205 36.000 0.00 0.00 0.00 1.82
682 683 5.121611 TCGAAACATTGCACGAGATACATTT 59.878 36.000 0.00 0.00 0.00 2.32
683 684 4.629634 TCGAAACATTGCACGAGATACATT 59.370 37.500 0.00 0.00 0.00 2.71
684 685 4.180817 TCGAAACATTGCACGAGATACAT 58.819 39.130 0.00 0.00 0.00 2.29
685 686 3.580731 TCGAAACATTGCACGAGATACA 58.419 40.909 0.00 0.00 0.00 2.29
686 687 4.577687 TTCGAAACATTGCACGAGATAC 57.422 40.909 0.00 0.00 36.22 2.24
687 688 5.794687 AATTCGAAACATTGCACGAGATA 57.205 34.783 0.00 0.00 36.22 1.98
688 689 4.685169 AATTCGAAACATTGCACGAGAT 57.315 36.364 0.00 0.00 36.22 2.75
689 690 4.481930 AAATTCGAAACATTGCACGAGA 57.518 36.364 0.00 0.00 36.22 4.04
690 691 4.674662 TCAAAATTCGAAACATTGCACGAG 59.325 37.500 0.00 0.00 36.22 4.18
691 692 4.602006 TCAAAATTCGAAACATTGCACGA 58.398 34.783 0.00 0.00 0.00 4.35
692 693 4.945292 TCAAAATTCGAAACATTGCACG 57.055 36.364 0.00 0.00 0.00 5.34
693 694 8.172159 TCATATCAAAATTCGAAACATTGCAC 57.828 30.769 0.00 0.00 0.00 4.57
694 695 8.754230 TTCATATCAAAATTCGAAACATTGCA 57.246 26.923 0.00 0.63 0.00 4.08
718 719 9.995003 ACACCAATGTATGTTGTCATAAAATTT 57.005 25.926 0.00 0.00 37.26 1.82
719 720 9.995003 AACACCAATGTATGTTGTCATAAAATT 57.005 25.926 0.12 0.00 38.45 1.82
720 721 9.421806 CAACACCAATGTATGTTGTCATAAAAT 57.578 29.630 15.41 0.00 46.89 1.82
721 722 8.809159 CAACACCAATGTATGTTGTCATAAAA 57.191 30.769 15.41 0.00 46.89 1.52
733 734 8.202137 GGTCTAGTACATACAACACCAATGTAT 58.798 37.037 0.00 0.00 43.05 2.29
734 735 7.398047 AGGTCTAGTACATACAACACCAATGTA 59.602 37.037 0.00 0.00 38.45 2.29
735 736 6.212791 AGGTCTAGTACATACAACACCAATGT 59.787 38.462 0.00 0.00 42.46 2.71
736 737 6.640518 AGGTCTAGTACATACAACACCAATG 58.359 40.000 0.00 0.00 0.00 2.82
737 738 6.869206 AGGTCTAGTACATACAACACCAAT 57.131 37.500 0.00 0.00 0.00 3.16
738 739 6.675413 AAGGTCTAGTACATACAACACCAA 57.325 37.500 0.00 0.00 0.00 3.67
739 740 6.675413 AAAGGTCTAGTACATACAACACCA 57.325 37.500 0.00 0.00 0.00 4.17
740 741 7.658575 TGAAAAAGGTCTAGTACATACAACACC 59.341 37.037 0.00 0.00 0.00 4.16
741 742 8.597662 TGAAAAAGGTCTAGTACATACAACAC 57.402 34.615 0.00 0.00 0.00 3.32
742 743 8.644216 TCTGAAAAAGGTCTAGTACATACAACA 58.356 33.333 0.00 0.00 0.00 3.33
743 744 9.654663 ATCTGAAAAAGGTCTAGTACATACAAC 57.345 33.333 0.00 0.00 0.00 3.32
772 773 8.744011 CCGTATCACATTTTAAAACGTTTCAAA 58.256 29.630 15.01 15.91 0.00 2.69
773 774 7.096558 GCCGTATCACATTTTAAAACGTTTCAA 60.097 33.333 15.01 2.57 0.00 2.69
774 775 6.360148 GCCGTATCACATTTTAAAACGTTTCA 59.640 34.615 15.01 0.00 0.00 2.69
775 776 6.450154 CGCCGTATCACATTTTAAAACGTTTC 60.450 38.462 15.01 0.00 0.00 2.78
776 777 5.340138 CGCCGTATCACATTTTAAAACGTTT 59.660 36.000 7.96 7.96 0.00 3.60
777 778 4.847217 CGCCGTATCACATTTTAAAACGTT 59.153 37.500 1.97 0.00 0.00 3.99
778 779 4.083908 ACGCCGTATCACATTTTAAAACGT 60.084 37.500 1.97 0.00 0.00 3.99
779 780 4.396519 ACGCCGTATCACATTTTAAAACG 58.603 39.130 1.97 0.00 0.00 3.60
780 781 5.506832 CAGACGCCGTATCACATTTTAAAAC 59.493 40.000 1.97 0.00 0.00 2.43
781 782 5.391097 CCAGACGCCGTATCACATTTTAAAA 60.391 40.000 2.51 2.51 0.00 1.52
782 783 4.093703 CCAGACGCCGTATCACATTTTAAA 59.906 41.667 0.00 0.00 0.00 1.52
783 784 3.619483 CCAGACGCCGTATCACATTTTAA 59.381 43.478 0.00 0.00 0.00 1.52
784 785 3.191669 CCAGACGCCGTATCACATTTTA 58.808 45.455 0.00 0.00 0.00 1.52
785 786 2.006888 CCAGACGCCGTATCACATTTT 58.993 47.619 0.00 0.00 0.00 1.82
786 787 1.651987 CCAGACGCCGTATCACATTT 58.348 50.000 0.00 0.00 0.00 2.32
787 788 0.810031 GCCAGACGCCGTATCACATT 60.810 55.000 0.00 0.00 0.00 2.71
788 789 1.227263 GCCAGACGCCGTATCACAT 60.227 57.895 0.00 0.00 0.00 3.21
789 790 2.183300 GCCAGACGCCGTATCACA 59.817 61.111 0.00 0.00 0.00 3.58
790 791 2.954868 CGCCAGACGCCGTATCAC 60.955 66.667 0.00 0.00 33.16 3.06
808 809 0.744414 CAGGGAAGTATGCACCGGTG 60.744 60.000 30.66 30.66 0.00 4.94
809 810 0.907704 TCAGGGAAGTATGCACCGGT 60.908 55.000 0.00 0.00 0.00 5.28
810 811 0.469917 ATCAGGGAAGTATGCACCGG 59.530 55.000 0.00 0.00 0.00 5.28
811 812 2.332063 AATCAGGGAAGTATGCACCG 57.668 50.000 0.00 0.00 0.00 4.94
812 813 3.378427 GTCAAATCAGGGAAGTATGCACC 59.622 47.826 0.00 0.00 0.00 5.01
813 814 4.009675 TGTCAAATCAGGGAAGTATGCAC 58.990 43.478 0.00 0.00 0.00 4.57
814 815 4.299586 TGTCAAATCAGGGAAGTATGCA 57.700 40.909 0.00 0.00 0.00 3.96
815 816 4.702131 ACTTGTCAAATCAGGGAAGTATGC 59.298 41.667 0.00 0.00 0.00 3.14
816 817 6.207417 ACAACTTGTCAAATCAGGGAAGTATG 59.793 38.462 0.00 0.00 0.00 2.39
817 818 6.207417 CACAACTTGTCAAATCAGGGAAGTAT 59.793 38.462 0.00 0.00 0.00 2.12
818 819 5.530915 CACAACTTGTCAAATCAGGGAAGTA 59.469 40.000 0.00 0.00 0.00 2.24
819 820 4.339247 CACAACTTGTCAAATCAGGGAAGT 59.661 41.667 0.00 0.00 0.00 3.01
820 821 4.794003 GCACAACTTGTCAAATCAGGGAAG 60.794 45.833 0.00 0.00 0.00 3.46
821 822 3.068024 GCACAACTTGTCAAATCAGGGAA 59.932 43.478 0.00 0.00 0.00 3.97
822 823 2.622942 GCACAACTTGTCAAATCAGGGA 59.377 45.455 0.00 0.00 0.00 4.20
823 824 2.361757 TGCACAACTTGTCAAATCAGGG 59.638 45.455 0.00 0.00 0.00 4.45
824 825 3.374745 GTGCACAACTTGTCAAATCAGG 58.625 45.455 13.17 0.00 0.00 3.86
825 826 3.181488 TGGTGCACAACTTGTCAAATCAG 60.181 43.478 20.43 0.00 0.00 2.90
826 827 2.757314 TGGTGCACAACTTGTCAAATCA 59.243 40.909 20.43 0.00 0.00 2.57
827 828 3.374745 CTGGTGCACAACTTGTCAAATC 58.625 45.455 20.43 0.00 0.00 2.17
828 829 2.101249 CCTGGTGCACAACTTGTCAAAT 59.899 45.455 20.43 0.00 0.00 2.32
829 830 1.476085 CCTGGTGCACAACTTGTCAAA 59.524 47.619 20.43 0.00 0.00 2.69
830 831 1.102154 CCTGGTGCACAACTTGTCAA 58.898 50.000 20.43 0.00 0.00 3.18
831 832 0.034574 ACCTGGTGCACAACTTGTCA 60.035 50.000 20.43 4.29 0.00 3.58
832 833 1.602377 GTACCTGGTGCACAACTTGTC 59.398 52.381 20.43 0.00 0.00 3.18
833 834 1.065053 TGTACCTGGTGCACAACTTGT 60.065 47.619 20.43 10.22 0.00 3.16
834 835 1.674359 TGTACCTGGTGCACAACTTG 58.326 50.000 20.43 4.40 0.00 3.16
835 836 2.504367 GATGTACCTGGTGCACAACTT 58.496 47.619 20.04 3.60 29.98 2.66
836 837 1.271379 GGATGTACCTGGTGCACAACT 60.271 52.381 20.04 4.00 29.98 3.16
837 838 1.165270 GGATGTACCTGGTGCACAAC 58.835 55.000 20.04 10.26 29.98 3.32
838 839 0.037590 GGGATGTACCTGGTGCACAA 59.962 55.000 20.04 6.43 38.98 3.33
839 840 1.130678 TGGGATGTACCTGGTGCACA 61.131 55.000 20.04 12.24 38.98 4.57
840 841 0.676782 GTGGGATGTACCTGGTGCAC 60.677 60.000 20.04 8.80 38.98 4.57
841 842 1.130678 TGTGGGATGTACCTGGTGCA 61.131 55.000 19.92 19.92 38.98 4.57
842 843 0.037590 TTGTGGGATGTACCTGGTGC 59.962 55.000 10.23 9.10 38.98 5.01
843 844 1.613255 GGTTGTGGGATGTACCTGGTG 60.613 57.143 10.23 0.00 38.98 4.17
844 845 0.696501 GGTTGTGGGATGTACCTGGT 59.303 55.000 4.05 4.05 38.98 4.00
845 846 0.695924 TGGTTGTGGGATGTACCTGG 59.304 55.000 0.00 0.00 38.98 4.45
846 847 1.073125 TGTGGTTGTGGGATGTACCTG 59.927 52.381 0.00 0.00 38.98 4.00
847 848 1.440618 TGTGGTTGTGGGATGTACCT 58.559 50.000 0.00 0.00 38.98 3.08
848 849 1.883926 GTTGTGGTTGTGGGATGTACC 59.116 52.381 0.00 0.00 38.08 3.34
849 850 2.858745 AGTTGTGGTTGTGGGATGTAC 58.141 47.619 0.00 0.00 0.00 2.90
850 851 3.586470 AAGTTGTGGTTGTGGGATGTA 57.414 42.857 0.00 0.00 0.00 2.29
851 852 2.452600 AAGTTGTGGTTGTGGGATGT 57.547 45.000 0.00 0.00 0.00 3.06
852 853 4.808558 CATAAAGTTGTGGTTGTGGGATG 58.191 43.478 0.00 0.00 0.00 3.51
853 854 3.258123 GCATAAAGTTGTGGTTGTGGGAT 59.742 43.478 0.00 0.00 0.00 3.85
854 855 2.625790 GCATAAAGTTGTGGTTGTGGGA 59.374 45.455 0.00 0.00 0.00 4.37
855 856 2.363680 TGCATAAAGTTGTGGTTGTGGG 59.636 45.455 0.00 0.00 0.00 4.61
856 857 3.317711 TCTGCATAAAGTTGTGGTTGTGG 59.682 43.478 0.00 0.00 0.00 4.17
857 858 4.539870 CTCTGCATAAAGTTGTGGTTGTG 58.460 43.478 0.00 0.00 0.00 3.33
858 859 3.004734 GCTCTGCATAAAGTTGTGGTTGT 59.995 43.478 0.00 0.00 0.00 3.32
859 860 3.004629 TGCTCTGCATAAAGTTGTGGTTG 59.995 43.478 0.00 0.00 31.71 3.77
860 861 3.221771 TGCTCTGCATAAAGTTGTGGTT 58.778 40.909 0.00 0.00 31.71 3.67
861 862 2.862541 TGCTCTGCATAAAGTTGTGGT 58.137 42.857 0.00 0.00 31.71 4.16
862 863 3.921119 TTGCTCTGCATAAAGTTGTGG 57.079 42.857 0.00 0.00 38.76 4.17
863 864 5.921976 TGAATTTGCTCTGCATAAAGTTGTG 59.078 36.000 0.00 0.00 38.76 3.33
864 865 6.088016 TGAATTTGCTCTGCATAAAGTTGT 57.912 33.333 0.00 0.00 38.76 3.32
865 866 6.035650 CCATGAATTTGCTCTGCATAAAGTTG 59.964 38.462 0.00 0.00 38.76 3.16
866 867 6.071221 TCCATGAATTTGCTCTGCATAAAGTT 60.071 34.615 0.00 0.00 38.76 2.66
867 868 5.419788 TCCATGAATTTGCTCTGCATAAAGT 59.580 36.000 0.00 0.00 38.76 2.66
868 869 5.898174 TCCATGAATTTGCTCTGCATAAAG 58.102 37.500 0.00 0.00 38.76 1.85
869 870 5.918426 TCCATGAATTTGCTCTGCATAAA 57.082 34.783 0.00 0.00 38.76 1.40
870 871 5.680408 GCTTCCATGAATTTGCTCTGCATAA 60.680 40.000 0.00 0.00 38.76 1.90
871 872 4.202080 GCTTCCATGAATTTGCTCTGCATA 60.202 41.667 0.00 0.00 38.76 3.14
872 873 3.430374 GCTTCCATGAATTTGCTCTGCAT 60.430 43.478 0.00 0.00 38.76 3.96
873 874 2.094390 GCTTCCATGAATTTGCTCTGCA 60.094 45.455 0.00 0.00 36.47 4.41
890 891 1.339929 GCCTAGGAGCTCTACTGCTTC 59.660 57.143 14.75 0.00 46.43 3.86
1031 1032 3.445805 GGAACAGTTTCTTTGTGGTGGAA 59.554 43.478 0.00 0.00 31.71 3.53
1055 1056 3.206150 GTGACCAAGAGAACTTTGCTCA 58.794 45.455 0.00 0.00 34.85 4.26
1086 1087 0.979665 AGCAAAGCAGAGTAGCCAGA 59.020 50.000 0.00 0.00 34.23 3.86
1089 1090 2.924029 GCAAAAGCAAAGCAGAGTAGCC 60.924 50.000 0.00 0.00 34.23 3.93
1126 1127 4.767255 CGTGGCAGGGCTGAGGAC 62.767 72.222 0.00 0.00 0.00 3.85
1259 1260 1.217882 GGACCTGTCGATTATTGCGG 58.782 55.000 0.00 0.00 0.00 5.69
1267 1268 1.686110 GGTGGAGGGACCTGTCGAT 60.686 63.158 0.00 0.00 39.86 3.59
1271 1272 2.930562 GCTGGTGGAGGGACCTGT 60.931 66.667 0.00 0.00 37.30 4.00
1474 1475 1.638388 CCGTCTAGGCACGTCACGTA 61.638 60.000 0.41 0.00 38.32 3.57
1575 1576 0.670546 CAGAATCCACGGCGTTGAGT 60.671 55.000 18.81 16.52 0.00 3.41
1587 1588 2.109126 GGCAGCCGTGTCAGAATCC 61.109 63.158 0.00 0.00 0.00 3.01
1589 1590 2.434884 CGGCAGCCGTGTCAGAAT 60.435 61.111 26.69 0.00 42.73 2.40
2090 2115 9.964354 TCCTTCATCATGATAGAAAGAAAGAAA 57.036 29.630 19.00 0.00 0.00 2.52
2091 2116 9.388506 GTCCTTCATCATGATAGAAAGAAAGAA 57.611 33.333 19.00 10.77 0.00 2.52
2092 2117 7.989741 GGTCCTTCATCATGATAGAAAGAAAGA 59.010 37.037 19.00 10.99 0.00 2.52
2093 2118 7.042187 CGGTCCTTCATCATGATAGAAAGAAAG 60.042 40.741 19.00 9.36 0.00 2.62
2094 2119 6.763135 CGGTCCTTCATCATGATAGAAAGAAA 59.237 38.462 19.00 9.26 0.00 2.52
2095 2120 6.283694 CGGTCCTTCATCATGATAGAAAGAA 58.716 40.000 19.00 12.91 0.00 2.52
2096 2121 5.740224 GCGGTCCTTCATCATGATAGAAAGA 60.740 44.000 19.00 15.33 0.00 2.52
2097 2122 4.450419 GCGGTCCTTCATCATGATAGAAAG 59.550 45.833 8.15 11.80 0.00 2.62
2220 2245 4.333649 ACATCTTGTATGCATGTTCTTCGG 59.666 41.667 10.16 0.00 0.00 4.30
2287 2312 1.975407 GGCCAGCAGCAATCAGTGT 60.975 57.895 0.00 0.00 46.50 3.55
2453 2489 5.635280 CCATCATTGTGTCCGTGATCTATAC 59.365 44.000 0.00 0.00 30.57 1.47
2455 2491 4.344968 TCCATCATTGTGTCCGTGATCTAT 59.655 41.667 0.00 0.00 30.57 1.98
2547 2584 2.762459 TAGCTAGGTGGTGGCGGG 60.762 66.667 4.27 0.00 37.82 6.13
2563 2600 1.725557 CGGCGTGCTTAGGAGAGCTA 61.726 60.000 0.00 0.00 43.11 3.32
2596 2633 4.580855 AATTAATTGTGCGCGTACGTTA 57.419 36.364 22.16 19.01 42.83 3.18
2597 2634 3.458779 AATTAATTGTGCGCGTACGTT 57.541 38.095 22.16 19.96 42.83 3.99
2598 2635 3.458779 AAATTAATTGTGCGCGTACGT 57.541 38.095 22.16 10.86 42.83 3.57
2599 2636 3.536745 GCAAAATTAATTGTGCGCGTACG 60.537 43.478 23.96 11.84 40.77 3.67
2600 2637 3.895072 GCAAAATTAATTGTGCGCGTAC 58.105 40.909 23.96 21.02 40.77 3.67
2640 2677 9.261180 TCCAGTACGTATATACTTGTGTAGTAC 57.739 37.037 11.05 12.24 41.99 2.73
2642 2679 8.737168 TTCCAGTACGTATATACTTGTGTAGT 57.263 34.615 11.05 5.91 41.04 2.73
2643 2680 8.288208 CCTTCCAGTACGTATATACTTGTGTAG 58.712 40.741 11.05 4.54 32.92 2.74
2644 2681 7.775093 ACCTTCCAGTACGTATATACTTGTGTA 59.225 37.037 11.05 3.29 32.92 2.90
2645 2682 6.604795 ACCTTCCAGTACGTATATACTTGTGT 59.395 38.462 11.05 4.19 32.92 3.72
2646 2683 7.035840 ACCTTCCAGTACGTATATACTTGTG 57.964 40.000 11.05 4.44 32.92 3.33
2652 2689 6.145534 CGTAACGACCTTCCAGTACGTATATA 59.854 42.308 0.00 0.00 36.20 0.86
2653 2690 5.050091 CGTAACGACCTTCCAGTACGTATAT 60.050 44.000 0.00 0.00 36.20 0.86
2735 2784 4.218200 TGTTGTAAAATGTGAGGCATCAGG 59.782 41.667 0.00 0.00 36.67 3.86
2738 2787 5.376854 ACTGTTGTAAAATGTGAGGCATC 57.623 39.130 0.00 0.00 36.67 3.91
2739 2788 6.625740 GCATACTGTTGTAAAATGTGAGGCAT 60.626 38.462 0.00 0.00 34.02 4.40
2740 2789 5.335583 GCATACTGTTGTAAAATGTGAGGCA 60.336 40.000 0.00 0.00 31.80 4.75
2741 2790 5.095490 GCATACTGTTGTAAAATGTGAGGC 58.905 41.667 0.00 0.00 31.80 4.70
2742 2791 6.252967 TGCATACTGTTGTAAAATGTGAGG 57.747 37.500 0.00 0.00 31.80 3.86
2743 2792 6.748658 CCATGCATACTGTTGTAAAATGTGAG 59.251 38.462 0.00 0.00 31.80 3.51
2744 2793 6.619744 CCATGCATACTGTTGTAAAATGTGA 58.380 36.000 0.00 0.00 31.80 3.58
2745 2794 5.289193 GCCATGCATACTGTTGTAAAATGTG 59.711 40.000 0.00 0.00 31.80 3.21
2746 2795 5.410067 GCCATGCATACTGTTGTAAAATGT 58.590 37.500 0.00 0.00 31.80 2.71
2747 2796 4.805192 GGCCATGCATACTGTTGTAAAATG 59.195 41.667 0.00 0.00 31.80 2.32
2748 2797 4.439974 CGGCCATGCATACTGTTGTAAAAT 60.440 41.667 2.24 0.00 31.80 1.82
2861 2910 5.943250 ATCCTGAGGTCCTGTAGGATGACT 61.943 50.000 24.24 9.12 45.73 3.41
3116 3165 1.796796 GGTGACCGCATTCTTCTGC 59.203 57.895 0.00 0.00 38.81 4.26
3457 3506 4.643387 GCCCCACGGTGAACTGCT 62.643 66.667 10.28 0.00 0.00 4.24
3509 3558 0.179111 CATCATCGTACGCCACACCT 60.179 55.000 11.24 0.00 0.00 4.00
3524 3573 1.689243 CCACGGATCAGAGCCCATCA 61.689 60.000 0.00 0.00 0.00 3.07
3548 3597 0.596082 AAACATCAAACGAAGGGCCG 59.404 50.000 0.00 0.00 0.00 6.13
3576 3625 5.899299 ACTGCCATTAAAGATTTGATGAGC 58.101 37.500 10.64 11.66 36.57 4.26
3662 3722 7.497909 GTGCTTACTAAGGCCACAAGATAATAA 59.502 37.037 5.01 0.00 0.00 1.40
3666 3726 4.224147 TGTGCTTACTAAGGCCACAAGATA 59.776 41.667 5.01 0.00 31.48 1.98
3677 3737 7.094805 TGAGGTTTTATGCTTGTGCTTACTAAG 60.095 37.037 0.00 0.00 40.48 2.18
3678 3738 6.712998 TGAGGTTTTATGCTTGTGCTTACTAA 59.287 34.615 0.00 0.00 40.48 2.24
3679 3739 6.234920 TGAGGTTTTATGCTTGTGCTTACTA 58.765 36.000 0.00 0.00 40.48 1.82
3680 3740 5.070001 TGAGGTTTTATGCTTGTGCTTACT 58.930 37.500 0.00 0.00 40.48 2.24
3681 3741 5.181245 TCTGAGGTTTTATGCTTGTGCTTAC 59.819 40.000 0.00 0.00 40.48 2.34
3682 3742 5.312895 TCTGAGGTTTTATGCTTGTGCTTA 58.687 37.500 0.00 0.00 40.48 3.09
3703 3763 6.962182 TCCAATCAGATCAACTTAACCATCT 58.038 36.000 0.00 0.00 0.00 2.90
3705 3765 7.121382 ACATCCAATCAGATCAACTTAACCAT 58.879 34.615 0.00 0.00 0.00 3.55
3772 3832 1.762957 TGATCCCGGGAGATTGTTCTC 59.237 52.381 30.42 18.83 46.52 2.87
3790 3853 1.004161 TGTTCATCCGGGAGCAAATGA 59.996 47.619 0.00 0.00 0.00 2.57
3857 3921 4.264614 CGACACTAACACGAATATCCACAC 59.735 45.833 0.00 0.00 0.00 3.82
3909 3977 5.822519 TGCAGAACATTTCTTGTACTGACTT 59.177 36.000 0.00 0.00 37.68 3.01
4106 4624 1.188863 ATTGGGCCATGCAGAGTTTC 58.811 50.000 7.26 0.00 0.00 2.78
4249 4770 3.817084 TGTTCTTGATTCTGTGCTGAAGG 59.183 43.478 0.00 0.00 0.00 3.46
4252 4773 4.454678 ACTTGTTCTTGATTCTGTGCTGA 58.545 39.130 0.00 0.00 0.00 4.26
4441 4969 5.818336 TGAAAGTGAAACCGTAGAACAATCA 59.182 36.000 0.00 0.00 37.80 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.