Multiple sequence alignment - TraesCS3D01G318700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G318700 chr3D 100.000 2495 0 0 1 2495 432535607 432538101 0.000000e+00 4608
1 TraesCS3D01G318700 chr3B 89.749 1395 69 21 453 1786 564765294 564766675 0.000000e+00 1716
2 TraesCS3D01G318700 chr3B 87.448 239 20 8 1 231 564764109 564764345 1.470000e-67 267
3 TraesCS3D01G318700 chr3A 90.832 709 34 16 815 1493 570664866 570665573 0.000000e+00 920
4 TraesCS3D01G318700 chr3A 86.926 283 20 8 1501 1768 570665613 570665893 4.030000e-78 302
5 TraesCS3D01G318700 chr5D 94.000 100 4 2 1964 2062 301581312 301581410 1.550000e-32 150
6 TraesCS3D01G318700 chr5D 94.845 97 2 3 1964 2058 225253178 225253273 5.560000e-32 148
7 TraesCS3D01G318700 chr7D 93.750 96 5 1 1961 2055 540399254 540399159 2.590000e-30 143
8 TraesCS3D01G318700 chrUn 95.506 89 3 1 1967 2054 37006451 37006363 9.300000e-30 141
9 TraesCS3D01G318700 chrUn 95.506 89 3 1 1967 2054 38258672 38258584 9.300000e-30 141
10 TraesCS3D01G318700 chrUn 92.857 98 6 1 1958 2054 196709549 196709646 9.300000e-30 141
11 TraesCS3D01G318700 chr1B 93.684 95 4 2 1963 2055 140295432 140295526 9.300000e-30 141
12 TraesCS3D01G318700 chr1A 92.079 101 4 3 1964 2063 130844527 130844430 3.350000e-29 139
13 TraesCS3D01G318700 chr6A 95.349 86 3 1 1970 2054 418953999 418954084 4.330000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G318700 chr3D 432535607 432538101 2494 False 4608.0 4608 100.0000 1 2495 1 chr3D.!!$F1 2494
1 TraesCS3D01G318700 chr3B 564764109 564766675 2566 False 991.5 1716 88.5985 1 1786 2 chr3B.!!$F1 1785
2 TraesCS3D01G318700 chr3A 570664866 570665893 1027 False 611.0 920 88.8790 815 1768 2 chr3A.!!$F1 953

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
414 1092 0.525761 CACGCATTGACGGGGATTTT 59.474 50.0 5.68 0.0 37.37 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2088 2948 0.037326 TCACCCTCTTCGTGTCATGC 60.037 55.0 0.0 0.0 32.86 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.988350 AAAAATATACTAGCTCACAATTGTTCG 57.012 29.630 8.77 3.91 0.00 3.95
232 264 1.087501 CTAGAGCTTCCAAAACCGGC 58.912 55.000 0.00 0.00 0.00 6.13
249 281 2.824041 CGGAAACCATCCCGCCTG 60.824 66.667 0.00 0.00 46.39 4.85
269 323 1.002134 TTGCTTACCAGCCCTGAGC 60.002 57.895 0.00 0.00 46.74 4.26
312 861 4.690748 GCAAGGAGCGATGCATAGTATTTA 59.309 41.667 8.67 0.00 42.12 1.40
313 862 5.352569 GCAAGGAGCGATGCATAGTATTTAT 59.647 40.000 8.67 0.00 42.12 1.40
336 885 5.913137 TTTTTGCTGGATAACCGATGATT 57.087 34.783 0.00 0.00 39.42 2.57
337 886 5.913137 TTTTGCTGGATAACCGATGATTT 57.087 34.783 0.00 0.00 39.42 2.17
339 888 3.884895 TGCTGGATAACCGATGATTTGT 58.115 40.909 0.00 0.00 39.42 2.83
340 889 3.876914 TGCTGGATAACCGATGATTTGTC 59.123 43.478 0.00 0.00 39.42 3.18
341 890 3.876914 GCTGGATAACCGATGATTTGTCA 59.123 43.478 0.00 0.00 39.42 3.58
342 891 4.335315 GCTGGATAACCGATGATTTGTCAA 59.665 41.667 0.00 0.00 39.42 3.18
343 892 5.009010 GCTGGATAACCGATGATTTGTCAAT 59.991 40.000 0.00 0.00 39.42 2.57
346 895 6.183360 TGGATAACCGATGATTTGTCAATTGG 60.183 38.462 5.42 0.00 39.42 3.16
347 896 6.183360 GGATAACCGATGATTTGTCAATTGGT 60.183 38.462 5.42 0.00 0.00 3.67
365 1039 7.807433 TCAATTGGTATGTTTGAATTCGTGAAG 59.193 33.333 5.42 0.00 0.00 3.02
414 1092 0.525761 CACGCATTGACGGGGATTTT 59.474 50.000 5.68 0.00 37.37 1.82
472 1209 2.024918 CGCATGTGCATTCCCTACC 58.975 57.895 5.77 0.00 42.21 3.18
473 1210 1.447317 CGCATGTGCATTCCCTACCC 61.447 60.000 5.77 0.00 42.21 3.69
502 1239 3.939740 AACTCACATGTGCTATCCCAT 57.060 42.857 21.38 0.00 0.00 4.00
551 1288 2.905075 CCACGCAAGGATGACATAAGA 58.095 47.619 0.00 0.00 46.39 2.10
565 1302 6.892310 TGACATAAGATCACATTTCACTCG 57.108 37.500 0.00 0.00 0.00 4.18
639 1376 5.215252 ACCATAACCATATGTCTTCTCGG 57.785 43.478 1.24 0.00 37.75 4.63
658 1410 3.264706 TCGGGTGACTGGGAAAATTCATA 59.735 43.478 0.00 0.00 37.31 2.15
673 1425 9.354673 GGAAAATTCATAGACTATTGGGAATCA 57.645 33.333 6.88 0.00 0.00 2.57
694 1446 5.129634 TCACTACTTTTCTTGCAACCATGA 58.870 37.500 0.00 0.00 0.00 3.07
696 1448 4.887071 ACTACTTTTCTTGCAACCATGACA 59.113 37.500 0.00 0.00 0.00 3.58
697 1449 4.942761 ACTTTTCTTGCAACCATGACAT 57.057 36.364 0.00 0.00 0.00 3.06
762 1531 6.463995 AAAACACACAAAGCTGATTCCTTA 57.536 33.333 0.00 0.00 0.00 2.69
784 1553 2.740714 GAGTGGGCGTGCGACATTC 61.741 63.158 0.00 0.00 0.00 2.67
789 1558 1.154413 GGCGTGCGACATTCAGTTG 60.154 57.895 0.00 0.00 34.52 3.16
803 1572 1.021390 CAGTTGACGACATGGCCTCC 61.021 60.000 3.32 0.00 0.00 4.30
804 1573 1.003839 GTTGACGACATGGCCTCCA 60.004 57.895 3.32 0.00 38.19 3.86
805 1574 1.003839 TTGACGACATGGCCTCCAC 60.004 57.895 3.32 0.00 35.80 4.02
806 1575 2.509336 GACGACATGGCCTCCACG 60.509 66.667 3.32 7.86 35.80 4.94
988 1772 4.640855 GCCGCGCCGAGCTACATA 62.641 66.667 0.00 0.00 45.59 2.29
990 1774 2.300787 CCGCGCCGAGCTACATAAC 61.301 63.158 0.00 0.00 45.59 1.89
1221 2015 2.125147 CCCTTCGAGCAATGCCGA 60.125 61.111 13.19 13.19 31.78 5.54
1356 2150 5.422012 CAGCCAGGTAATTAAGAAACCCATT 59.578 40.000 0.00 0.00 33.53 3.16
1377 2176 1.013596 CAGTCACACGTCCTTTTGCA 58.986 50.000 0.00 0.00 0.00 4.08
1380 2179 3.249799 CAGTCACACGTCCTTTTGCATTA 59.750 43.478 0.00 0.00 0.00 1.90
1399 2198 6.154877 TGCATTATGAGATGGGTTTTTGATGT 59.845 34.615 0.00 0.00 0.00 3.06
1400 2199 6.477688 GCATTATGAGATGGGTTTTTGATGTG 59.522 38.462 0.00 0.00 0.00 3.21
1401 2200 7.631161 GCATTATGAGATGGGTTTTTGATGTGA 60.631 37.037 0.00 0.00 0.00 3.58
1402 2201 5.649782 ATGAGATGGGTTTTTGATGTGAC 57.350 39.130 0.00 0.00 0.00 3.67
1411 2210 5.010012 GGGTTTTTGATGTGACTTGATCTGT 59.990 40.000 0.00 0.00 0.00 3.41
1413 2212 6.980397 GGTTTTTGATGTGACTTGATCTGTTT 59.020 34.615 0.00 0.00 0.00 2.83
1533 2378 2.281208 CGTGGGGTTGCCGAAAGA 60.281 61.111 0.00 0.00 0.00 2.52
1609 2454 9.383519 TCGCTCTCATTCTTTTCTTTACATTAT 57.616 29.630 0.00 0.00 0.00 1.28
1621 2466 9.767684 TTTTCTTTACATTATGTTCATGTAGCG 57.232 29.630 2.23 0.00 38.16 4.26
1712 2570 6.586344 TCTCTTGTCAGAAGAAAATGACTGT 58.414 36.000 6.85 0.00 44.90 3.55
1717 2577 9.956720 CTTGTCAGAAGAAAATGACTGTTAAAT 57.043 29.630 6.85 0.00 44.90 1.40
1723 2583 8.150296 AGAAGAAAATGACTGTTAAATTTGGGG 58.850 33.333 0.00 0.00 0.00 4.96
1739 2599 3.681593 TGGGGAAATTTTCATGTGCTG 57.318 42.857 11.09 0.00 0.00 4.41
1741 2601 3.244146 TGGGGAAATTTTCATGTGCTGTG 60.244 43.478 11.09 0.00 0.00 3.66
1747 2607 4.895668 ATTTTCATGTGCTGTGGGATTT 57.104 36.364 0.00 0.00 0.00 2.17
1801 2661 8.821147 TGTTTGTACTATAGATTCGTTGTTGT 57.179 30.769 6.78 0.00 0.00 3.32
1802 2662 8.705134 TGTTTGTACTATAGATTCGTTGTTGTG 58.295 33.333 6.78 0.00 0.00 3.33
1803 2663 8.706035 GTTTGTACTATAGATTCGTTGTTGTGT 58.294 33.333 6.78 0.00 0.00 3.72
1804 2664 9.911138 TTTGTACTATAGATTCGTTGTTGTGTA 57.089 29.630 6.78 0.00 0.00 2.90
1805 2665 8.900511 TGTACTATAGATTCGTTGTTGTGTAC 57.099 34.615 6.78 0.00 0.00 2.90
1806 2666 8.733458 TGTACTATAGATTCGTTGTTGTGTACT 58.267 33.333 6.78 0.00 0.00 2.73
1809 2669 9.170734 ACTATAGATTCGTTGTTGTGTACTAGA 57.829 33.333 6.78 0.00 0.00 2.43
1810 2670 9.999009 CTATAGATTCGTTGTTGTGTACTAGAA 57.001 33.333 0.00 0.00 0.00 2.10
1812 2672 7.582435 AGATTCGTTGTTGTGTACTAGAATG 57.418 36.000 0.00 0.00 30.77 2.67
1813 2673 7.152645 AGATTCGTTGTTGTGTACTAGAATGT 58.847 34.615 0.00 0.00 30.77 2.71
1814 2674 6.519353 TTCGTTGTTGTGTACTAGAATGTG 57.481 37.500 0.00 0.00 0.00 3.21
1815 2675 4.446385 TCGTTGTTGTGTACTAGAATGTGC 59.554 41.667 0.00 0.00 0.00 4.57
1816 2676 4.447724 CGTTGTTGTGTACTAGAATGTGCT 59.552 41.667 0.00 0.00 0.00 4.40
1817 2677 5.631929 CGTTGTTGTGTACTAGAATGTGCTA 59.368 40.000 0.00 0.00 0.00 3.49
1818 2678 6.183359 CGTTGTTGTGTACTAGAATGTGCTAG 60.183 42.308 0.00 0.00 42.77 3.42
1820 2680 6.755206 TGTTGTGTACTAGAATGTGCTAGTT 58.245 36.000 6.01 0.00 46.67 2.24
1821 2681 7.888424 TGTTGTGTACTAGAATGTGCTAGTTA 58.112 34.615 6.01 0.00 46.67 2.24
1822 2682 8.528643 TGTTGTGTACTAGAATGTGCTAGTTAT 58.471 33.333 6.01 0.00 46.67 1.89
1823 2683 8.808529 GTTGTGTACTAGAATGTGCTAGTTATG 58.191 37.037 6.01 0.00 46.67 1.90
1824 2684 6.978659 TGTGTACTAGAATGTGCTAGTTATGC 59.021 38.462 6.01 0.00 46.67 3.14
1825 2685 6.421202 GTGTACTAGAATGTGCTAGTTATGCC 59.579 42.308 6.01 0.00 46.67 4.40
1826 2686 4.621991 ACTAGAATGTGCTAGTTATGCCG 58.378 43.478 0.00 0.00 46.67 5.69
1827 2687 3.819564 AGAATGTGCTAGTTATGCCGA 57.180 42.857 0.00 0.00 0.00 5.54
1828 2688 4.342862 AGAATGTGCTAGTTATGCCGAT 57.657 40.909 0.00 0.00 0.00 4.18
1829 2689 4.060900 AGAATGTGCTAGTTATGCCGATG 58.939 43.478 0.00 0.00 0.00 3.84
1830 2690 1.581934 TGTGCTAGTTATGCCGATGC 58.418 50.000 0.00 0.00 38.26 3.91
1831 2691 0.868406 GTGCTAGTTATGCCGATGCC 59.132 55.000 0.00 0.00 36.33 4.40
1832 2692 0.467804 TGCTAGTTATGCCGATGCCA 59.532 50.000 0.00 0.00 36.33 4.92
1833 2693 1.151668 GCTAGTTATGCCGATGCCAG 58.848 55.000 0.00 0.00 36.33 4.85
1834 2694 1.270305 GCTAGTTATGCCGATGCCAGA 60.270 52.381 0.00 0.00 36.33 3.86
1835 2695 2.613977 GCTAGTTATGCCGATGCCAGAT 60.614 50.000 0.00 0.00 36.33 2.90
1836 2696 1.888215 AGTTATGCCGATGCCAGATG 58.112 50.000 0.00 0.00 36.33 2.90
1837 2697 0.239347 GTTATGCCGATGCCAGATGC 59.761 55.000 0.00 0.00 41.77 3.91
1838 2698 0.890542 TTATGCCGATGCCAGATGCC 60.891 55.000 0.00 0.00 40.16 4.40
1839 2699 2.054473 TATGCCGATGCCAGATGCCA 62.054 55.000 0.00 0.00 40.16 4.92
1840 2700 2.829914 GCCGATGCCAGATGCCAA 60.830 61.111 0.00 0.00 40.16 4.52
1841 2701 2.198287 GCCGATGCCAGATGCCAAT 61.198 57.895 0.00 0.00 40.16 3.16
1842 2702 0.890542 GCCGATGCCAGATGCCAATA 60.891 55.000 0.00 0.00 40.16 1.90
1843 2703 1.608055 CCGATGCCAGATGCCAATAA 58.392 50.000 0.00 0.00 40.16 1.40
1844 2704 1.955778 CCGATGCCAGATGCCAATAAA 59.044 47.619 0.00 0.00 40.16 1.40
1845 2705 2.361757 CCGATGCCAGATGCCAATAAAA 59.638 45.455 0.00 0.00 40.16 1.52
1846 2706 3.006110 CCGATGCCAGATGCCAATAAAAT 59.994 43.478 0.00 0.00 40.16 1.82
1847 2707 3.985279 CGATGCCAGATGCCAATAAAATG 59.015 43.478 0.00 0.00 40.16 2.32
1848 2708 3.182341 TGCCAGATGCCAATAAAATGC 57.818 42.857 0.00 0.00 40.16 3.56
1849 2709 2.500504 TGCCAGATGCCAATAAAATGCA 59.499 40.909 0.00 0.00 40.16 3.96
1850 2710 3.128349 GCCAGATGCCAATAAAATGCAG 58.872 45.455 0.00 0.00 38.58 4.41
1851 2711 3.128349 CCAGATGCCAATAAAATGCAGC 58.872 45.455 0.00 0.00 41.46 5.25
1854 2714 4.049546 GATGCCAATAAAATGCAGCTCA 57.950 40.909 0.00 0.00 38.32 4.26
1855 2715 3.957591 TGCCAATAAAATGCAGCTCAA 57.042 38.095 0.00 0.00 0.00 3.02
1856 2716 4.268797 TGCCAATAAAATGCAGCTCAAA 57.731 36.364 0.00 0.00 0.00 2.69
1857 2717 4.247258 TGCCAATAAAATGCAGCTCAAAG 58.753 39.130 0.00 0.00 0.00 2.77
1858 2718 4.021280 TGCCAATAAAATGCAGCTCAAAGA 60.021 37.500 0.00 0.00 0.00 2.52
1859 2719 4.931002 GCCAATAAAATGCAGCTCAAAGAA 59.069 37.500 0.00 0.00 0.00 2.52
1860 2720 5.409214 GCCAATAAAATGCAGCTCAAAGAAA 59.591 36.000 0.00 0.00 0.00 2.52
1861 2721 6.073112 GCCAATAAAATGCAGCTCAAAGAAAA 60.073 34.615 0.00 0.00 0.00 2.29
1862 2722 7.361457 GCCAATAAAATGCAGCTCAAAGAAAAT 60.361 33.333 0.00 0.00 0.00 1.82
1863 2723 7.960738 CCAATAAAATGCAGCTCAAAGAAAATG 59.039 33.333 0.00 0.00 0.00 2.32
1864 2724 5.352643 AAAATGCAGCTCAAAGAAAATGC 57.647 34.783 0.00 0.00 0.00 3.56
1865 2725 2.443887 TGCAGCTCAAAGAAAATGCC 57.556 45.000 0.00 0.00 32.77 4.40
1866 2726 1.687660 TGCAGCTCAAAGAAAATGCCA 59.312 42.857 0.00 0.00 32.77 4.92
1867 2727 2.064014 GCAGCTCAAAGAAAATGCCAC 58.936 47.619 0.00 0.00 0.00 5.01
1868 2728 2.288640 GCAGCTCAAAGAAAATGCCACT 60.289 45.455 0.00 0.00 0.00 4.00
1869 2729 3.057315 GCAGCTCAAAGAAAATGCCACTA 60.057 43.478 0.00 0.00 0.00 2.74
1870 2730 4.479619 CAGCTCAAAGAAAATGCCACTAC 58.520 43.478 0.00 0.00 0.00 2.73
1871 2731 4.022935 CAGCTCAAAGAAAATGCCACTACA 60.023 41.667 0.00 0.00 0.00 2.74
1872 2732 4.584325 AGCTCAAAGAAAATGCCACTACAA 59.416 37.500 0.00 0.00 0.00 2.41
1873 2733 5.244626 AGCTCAAAGAAAATGCCACTACAAT 59.755 36.000 0.00 0.00 0.00 2.71
1874 2734 5.574443 GCTCAAAGAAAATGCCACTACAATC 59.426 40.000 0.00 0.00 0.00 2.67
1875 2735 6.024552 TCAAAGAAAATGCCACTACAATCC 57.975 37.500 0.00 0.00 0.00 3.01
1876 2736 5.538053 TCAAAGAAAATGCCACTACAATCCA 59.462 36.000 0.00 0.00 0.00 3.41
1877 2737 6.041409 TCAAAGAAAATGCCACTACAATCCAA 59.959 34.615 0.00 0.00 0.00 3.53
1878 2738 6.610075 AAGAAAATGCCACTACAATCCAAT 57.390 33.333 0.00 0.00 0.00 3.16
1879 2739 5.969423 AGAAAATGCCACTACAATCCAATG 58.031 37.500 0.00 0.00 0.00 2.82
1880 2740 5.481473 AGAAAATGCCACTACAATCCAATGT 59.519 36.000 0.00 0.00 37.32 2.71
1881 2741 5.743636 AAATGCCACTACAATCCAATGTT 57.256 34.783 0.00 0.00 34.75 2.71
1882 2742 6.849085 AAATGCCACTACAATCCAATGTTA 57.151 33.333 0.00 0.00 34.75 2.41
1883 2743 6.849085 AATGCCACTACAATCCAATGTTAA 57.151 33.333 0.00 0.00 34.75 2.01
1884 2744 5.637006 TGCCACTACAATCCAATGTTAAC 57.363 39.130 0.00 0.00 34.75 2.01
1885 2745 5.073428 TGCCACTACAATCCAATGTTAACA 58.927 37.500 11.41 11.41 34.75 2.41
1886 2746 5.048364 TGCCACTACAATCCAATGTTAACAC 60.048 40.000 11.22 0.00 34.75 3.32
1887 2747 5.048364 GCCACTACAATCCAATGTTAACACA 60.048 40.000 11.22 0.00 37.31 3.72
1888 2748 6.515862 GCCACTACAATCCAATGTTAACACAA 60.516 38.462 11.22 0.00 36.16 3.33
1889 2749 7.429633 CCACTACAATCCAATGTTAACACAAA 58.570 34.615 11.22 0.00 36.16 2.83
1890 2750 7.594758 CCACTACAATCCAATGTTAACACAAAG 59.405 37.037 11.22 0.44 36.16 2.77
1891 2751 8.349245 CACTACAATCCAATGTTAACACAAAGA 58.651 33.333 11.22 6.20 36.16 2.52
1892 2752 9.077885 ACTACAATCCAATGTTAACACAAAGAT 57.922 29.630 11.22 8.25 36.16 2.40
1893 2753 9.559958 CTACAATCCAATGTTAACACAAAGATC 57.440 33.333 11.22 0.00 36.16 2.75
1894 2754 7.950512 ACAATCCAATGTTAACACAAAGATCA 58.049 30.769 11.22 0.00 36.16 2.92
1895 2755 8.084073 ACAATCCAATGTTAACACAAAGATCAG 58.916 33.333 11.22 9.53 36.16 2.90
1896 2756 8.298854 CAATCCAATGTTAACACAAAGATCAGA 58.701 33.333 11.22 0.00 36.16 3.27
1897 2757 7.815840 TCCAATGTTAACACAAAGATCAGAA 57.184 32.000 11.22 0.00 36.16 3.02
1898 2758 8.231692 TCCAATGTTAACACAAAGATCAGAAA 57.768 30.769 11.22 0.00 36.16 2.52
1899 2759 8.690884 TCCAATGTTAACACAAAGATCAGAAAA 58.309 29.630 11.22 0.00 36.16 2.29
1900 2760 9.311916 CCAATGTTAACACAAAGATCAGAAAAA 57.688 29.630 11.22 0.00 36.16 1.94
1923 2783 9.892130 AAAAACTAAACAATAACCAACCAATGA 57.108 25.926 0.00 0.00 0.00 2.57
1925 2785 9.487790 AAACTAAACAATAACCAACCAATGATG 57.512 29.630 0.00 0.00 0.00 3.07
1926 2786 8.189119 ACTAAACAATAACCAACCAATGATGT 57.811 30.769 0.00 0.00 0.00 3.06
1927 2787 8.646900 ACTAAACAATAACCAACCAATGATGTT 58.353 29.630 0.00 0.00 0.00 2.71
1928 2788 7.727331 AAACAATAACCAACCAATGATGTTG 57.273 32.000 0.00 0.00 42.11 3.33
1929 2789 5.237048 ACAATAACCAACCAATGATGTTGC 58.763 37.500 0.00 0.00 41.33 4.17
1930 2790 5.221601 ACAATAACCAACCAATGATGTTGCA 60.222 36.000 0.00 0.00 41.33 4.08
1931 2791 3.834489 AACCAACCAATGATGTTGCAA 57.166 38.095 0.00 0.00 41.33 4.08
1932 2792 3.389925 ACCAACCAATGATGTTGCAAG 57.610 42.857 0.00 0.00 41.33 4.01
1933 2793 2.699846 ACCAACCAATGATGTTGCAAGT 59.300 40.909 0.00 0.00 41.33 3.16
1934 2794 3.894427 ACCAACCAATGATGTTGCAAGTA 59.106 39.130 0.00 0.00 41.33 2.24
1935 2795 4.527816 ACCAACCAATGATGTTGCAAGTAT 59.472 37.500 0.00 0.00 41.33 2.12
1936 2796 4.865925 CCAACCAATGATGTTGCAAGTATG 59.134 41.667 0.00 0.00 41.33 2.39
1937 2797 5.472148 CAACCAATGATGTTGCAAGTATGT 58.528 37.500 0.00 0.00 36.95 2.29
1938 2798 5.726980 ACCAATGATGTTGCAAGTATGTT 57.273 34.783 0.00 0.00 0.00 2.71
1939 2799 5.472148 ACCAATGATGTTGCAAGTATGTTG 58.528 37.500 0.00 3.18 0.00 3.33
1940 2800 5.243507 ACCAATGATGTTGCAAGTATGTTGA 59.756 36.000 0.00 0.00 0.00 3.18
1941 2801 6.071221 ACCAATGATGTTGCAAGTATGTTGAT 60.071 34.615 0.00 0.00 0.00 2.57
1942 2802 6.474427 CCAATGATGTTGCAAGTATGTTGATC 59.526 38.462 0.00 0.00 0.00 2.92
1943 2803 6.762702 ATGATGTTGCAAGTATGTTGATCA 57.237 33.333 0.00 0.00 0.00 2.92
1944 2804 6.572167 TGATGTTGCAAGTATGTTGATCAA 57.428 33.333 3.38 3.38 0.00 2.57
1945 2805 6.979465 TGATGTTGCAAGTATGTTGATCAAA 58.021 32.000 10.35 1.23 0.00 2.69
1946 2806 6.862608 TGATGTTGCAAGTATGTTGATCAAAC 59.137 34.615 10.35 5.13 39.41 2.93
1947 2807 5.211454 TGTTGCAAGTATGTTGATCAAACG 58.789 37.500 10.35 0.00 42.10 3.60
1948 2808 3.820689 TGCAAGTATGTTGATCAAACGC 58.179 40.909 10.35 5.81 42.10 4.84
1949 2809 3.251972 TGCAAGTATGTTGATCAAACGCA 59.748 39.130 10.35 8.24 42.10 5.24
1950 2810 4.082841 TGCAAGTATGTTGATCAAACGCAT 60.083 37.500 10.35 11.95 42.10 4.73
1951 2811 4.858692 GCAAGTATGTTGATCAAACGCATT 59.141 37.500 10.35 0.32 42.10 3.56
1952 2812 6.027131 GCAAGTATGTTGATCAAACGCATTA 58.973 36.000 10.35 0.00 42.10 1.90
1953 2813 6.526325 GCAAGTATGTTGATCAAACGCATTAA 59.474 34.615 10.35 0.00 42.10 1.40
1954 2814 7.061673 GCAAGTATGTTGATCAAACGCATTAAA 59.938 33.333 10.35 0.00 42.10 1.52
1955 2815 9.075519 CAAGTATGTTGATCAAACGCATTAAAT 57.924 29.630 10.35 0.00 42.10 1.40
1980 2840 9.726438 ATATTTTGATAATTTCTACTCCCTCCG 57.274 33.333 0.00 0.00 0.00 4.63
1981 2841 6.555463 TTTGATAATTTCTACTCCCTCCGT 57.445 37.500 0.00 0.00 0.00 4.69
1982 2842 5.786264 TGATAATTTCTACTCCCTCCGTC 57.214 43.478 0.00 0.00 0.00 4.79
1983 2843 4.587684 TGATAATTTCTACTCCCTCCGTCC 59.412 45.833 0.00 0.00 0.00 4.79
1984 2844 1.790818 ATTTCTACTCCCTCCGTCCC 58.209 55.000 0.00 0.00 0.00 4.46
1985 2845 0.410663 TTTCTACTCCCTCCGTCCCA 59.589 55.000 0.00 0.00 0.00 4.37
1986 2846 0.635009 TTCTACTCCCTCCGTCCCAT 59.365 55.000 0.00 0.00 0.00 4.00
1987 2847 1.526315 TCTACTCCCTCCGTCCCATA 58.474 55.000 0.00 0.00 0.00 2.74
1988 2848 1.854939 TCTACTCCCTCCGTCCCATAA 59.145 52.381 0.00 0.00 0.00 1.90
1989 2849 2.449730 TCTACTCCCTCCGTCCCATAAT 59.550 50.000 0.00 0.00 0.00 1.28
1990 2850 3.659195 TCTACTCCCTCCGTCCCATAATA 59.341 47.826 0.00 0.00 0.00 0.98
1991 2851 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
1992 2852 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
1993 2853 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
1994 2854 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
1995 2855 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
1996 2856 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
1997 2857 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
1998 2858 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
1999 2859 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
2000 2860 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
2001 2861 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
2002 2862 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
2003 2863 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
2004 2864 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
2005 2865 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
2006 2866 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
2007 2867 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
2018 2878 8.205131 AGAACGTTTTTGACATAGTTTAGTGT 57.795 30.769 0.46 0.00 0.00 3.55
2019 2879 8.671028 AGAACGTTTTTGACATAGTTTAGTGTT 58.329 29.630 0.46 0.00 0.00 3.32
2020 2880 9.919348 GAACGTTTTTGACATAGTTTAGTGTTA 57.081 29.630 0.46 0.00 0.00 2.41
2029 2889 9.919348 TGACATAGTTTAGTGTTAAAAACGTTC 57.081 29.630 0.00 0.00 39.90 3.95
2041 2901 9.702949 GTGTTAAAAACGTTCTTATATTTTGCG 57.297 29.630 0.00 0.00 0.00 4.85
2042 2902 9.661187 TGTTAAAAACGTTCTTATATTTTGCGA 57.339 25.926 0.00 0.00 0.00 5.10
2043 2903 9.912795 GTTAAAAACGTTCTTATATTTTGCGAC 57.087 29.630 0.00 0.00 0.00 5.19
2044 2904 9.661187 TTAAAAACGTTCTTATATTTTGCGACA 57.339 25.926 0.00 0.00 0.00 4.35
2045 2905 7.775729 AAAACGTTCTTATATTTTGCGACAG 57.224 32.000 0.00 0.00 0.00 3.51
2046 2906 6.715344 AACGTTCTTATATTTTGCGACAGA 57.285 33.333 0.00 0.00 0.00 3.41
2047 2907 6.332504 ACGTTCTTATATTTTGCGACAGAG 57.667 37.500 0.00 0.00 0.00 3.35
2048 2908 5.291128 ACGTTCTTATATTTTGCGACAGAGG 59.709 40.000 0.00 0.00 0.00 3.69
2049 2909 5.276868 CGTTCTTATATTTTGCGACAGAGGG 60.277 44.000 0.00 0.00 0.00 4.30
2050 2910 5.607939 TCTTATATTTTGCGACAGAGGGA 57.392 39.130 0.00 0.00 0.00 4.20
2051 2911 5.601662 TCTTATATTTTGCGACAGAGGGAG 58.398 41.667 0.00 0.00 0.00 4.30
2052 2912 3.914426 ATATTTTGCGACAGAGGGAGT 57.086 42.857 0.00 0.00 0.00 3.85
2053 2913 6.322969 TCTTATATTTTGCGACAGAGGGAGTA 59.677 38.462 0.00 0.00 0.00 2.59
2054 2914 2.743636 TTTTGCGACAGAGGGAGTAG 57.256 50.000 0.00 0.00 0.00 2.57
2055 2915 1.919240 TTTGCGACAGAGGGAGTAGA 58.081 50.000 0.00 0.00 0.00 2.59
2056 2916 1.919240 TTGCGACAGAGGGAGTAGAA 58.081 50.000 0.00 0.00 0.00 2.10
2057 2917 2.145397 TGCGACAGAGGGAGTAGAAT 57.855 50.000 0.00 0.00 0.00 2.40
2058 2918 3.292492 TGCGACAGAGGGAGTAGAATA 57.708 47.619 0.00 0.00 0.00 1.75
2059 2919 3.628008 TGCGACAGAGGGAGTAGAATAA 58.372 45.455 0.00 0.00 0.00 1.40
2060 2920 4.021229 TGCGACAGAGGGAGTAGAATAAA 58.979 43.478 0.00 0.00 0.00 1.40
2061 2921 4.649674 TGCGACAGAGGGAGTAGAATAAAT 59.350 41.667 0.00 0.00 0.00 1.40
2062 2922 5.221263 TGCGACAGAGGGAGTAGAATAAATC 60.221 44.000 0.00 0.00 0.00 2.17
2063 2923 5.010213 GCGACAGAGGGAGTAGAATAAATCT 59.990 44.000 0.00 0.00 42.48 2.40
2064 2924 6.442952 CGACAGAGGGAGTAGAATAAATCTG 58.557 44.000 0.00 0.00 39.30 2.90
2065 2925 6.263392 CGACAGAGGGAGTAGAATAAATCTGA 59.737 42.308 5.92 0.00 39.30 3.27
2066 2926 7.201830 CGACAGAGGGAGTAGAATAAATCTGAA 60.202 40.741 5.92 0.00 39.30 3.02
2067 2927 8.380742 ACAGAGGGAGTAGAATAAATCTGAAA 57.619 34.615 5.92 0.00 39.30 2.69
2068 2928 8.482128 ACAGAGGGAGTAGAATAAATCTGAAAG 58.518 37.037 5.92 0.00 39.30 2.62
2069 2929 7.930865 CAGAGGGAGTAGAATAAATCTGAAAGG 59.069 40.741 0.00 0.00 39.30 3.11
2070 2930 6.596621 AGGGAGTAGAATAAATCTGAAAGGC 58.403 40.000 0.00 0.00 39.30 4.35
2071 2931 6.388394 AGGGAGTAGAATAAATCTGAAAGGCT 59.612 38.462 0.00 0.00 39.30 4.58
2072 2932 7.057264 GGGAGTAGAATAAATCTGAAAGGCTT 58.943 38.462 0.00 0.00 39.30 4.35
2073 2933 8.211629 GGGAGTAGAATAAATCTGAAAGGCTTA 58.788 37.037 0.00 0.00 39.30 3.09
2074 2934 9.267084 GGAGTAGAATAAATCTGAAAGGCTTAG 57.733 37.037 0.00 0.00 39.30 2.18
2075 2935 9.825109 GAGTAGAATAAATCTGAAAGGCTTAGT 57.175 33.333 0.00 0.00 39.30 2.24
2076 2936 9.606631 AGTAGAATAAATCTGAAAGGCTTAGTG 57.393 33.333 0.00 0.00 39.30 2.74
2077 2937 7.872113 AGAATAAATCTGAAAGGCTTAGTGG 57.128 36.000 0.00 0.00 36.88 4.00
2078 2938 6.830838 AGAATAAATCTGAAAGGCTTAGTGGG 59.169 38.462 0.00 0.00 36.88 4.61
2079 2939 2.426842 ATCTGAAAGGCTTAGTGGGC 57.573 50.000 0.00 0.00 0.00 5.36
2080 2940 1.362224 TCTGAAAGGCTTAGTGGGCT 58.638 50.000 0.00 0.00 44.08 5.19
2081 2941 1.279271 TCTGAAAGGCTTAGTGGGCTC 59.721 52.381 0.00 0.00 41.31 4.70
2082 2942 1.003580 CTGAAAGGCTTAGTGGGCTCA 59.996 52.381 0.00 0.00 41.31 4.26
2083 2943 1.635487 TGAAAGGCTTAGTGGGCTCAT 59.365 47.619 0.00 0.00 41.31 2.90
2084 2944 2.041620 TGAAAGGCTTAGTGGGCTCATT 59.958 45.455 0.00 0.00 41.31 2.57
2085 2945 2.426842 AAGGCTTAGTGGGCTCATTC 57.573 50.000 0.00 0.00 41.31 2.67
2086 2946 1.289160 AGGCTTAGTGGGCTCATTCA 58.711 50.000 0.00 0.00 37.58 2.57
2087 2947 1.849039 AGGCTTAGTGGGCTCATTCAT 59.151 47.619 0.00 0.00 37.58 2.57
2088 2948 1.952296 GGCTTAGTGGGCTCATTCATG 59.048 52.381 0.00 0.00 0.00 3.07
2089 2949 1.336125 GCTTAGTGGGCTCATTCATGC 59.664 52.381 0.00 0.00 0.00 4.06
2090 2950 2.646930 CTTAGTGGGCTCATTCATGCA 58.353 47.619 0.00 0.00 0.00 3.96
2091 2951 3.220110 CTTAGTGGGCTCATTCATGCAT 58.780 45.455 0.00 0.00 0.00 3.96
2092 2952 1.399714 AGTGGGCTCATTCATGCATG 58.600 50.000 21.07 21.07 0.00 4.06
2093 2953 1.064240 AGTGGGCTCATTCATGCATGA 60.064 47.619 25.42 25.42 34.44 3.07
2094 2954 1.066605 GTGGGCTCATTCATGCATGAC 59.933 52.381 28.72 16.37 36.36 3.06
2095 2955 1.341187 TGGGCTCATTCATGCATGACA 60.341 47.619 28.72 17.95 36.36 3.58
2096 2956 1.066605 GGGCTCATTCATGCATGACAC 59.933 52.381 28.72 14.44 36.36 3.67
2097 2957 1.268386 GGCTCATTCATGCATGACACG 60.268 52.381 28.72 18.80 36.36 4.49
2098 2958 1.667212 GCTCATTCATGCATGACACGA 59.333 47.619 28.72 21.61 36.36 4.35
2099 2959 2.096335 GCTCATTCATGCATGACACGAA 59.904 45.455 28.72 14.51 34.49 3.85
2100 2960 3.787805 GCTCATTCATGCATGACACGAAG 60.788 47.826 28.72 20.15 33.29 3.79
2101 2961 3.598299 TCATTCATGCATGACACGAAGA 58.402 40.909 28.72 13.71 33.29 2.87
2102 2962 3.619929 TCATTCATGCATGACACGAAGAG 59.380 43.478 28.72 10.78 33.29 2.85
2103 2963 2.014335 TCATGCATGACACGAAGAGG 57.986 50.000 25.42 0.00 0.00 3.69
2104 2964 1.012086 CATGCATGACACGAAGAGGG 58.988 55.000 22.59 0.00 0.00 4.30
2105 2965 0.615331 ATGCATGACACGAAGAGGGT 59.385 50.000 0.00 0.00 40.76 4.34
2106 2966 0.320683 TGCATGACACGAAGAGGGTG 60.321 55.000 0.00 0.00 35.98 4.61
2107 2967 0.037326 GCATGACACGAAGAGGGTGA 60.037 55.000 0.00 0.00 35.98 4.02
2108 2968 2.001812 CATGACACGAAGAGGGTGAG 57.998 55.000 0.00 0.00 35.98 3.51
2109 2969 1.273606 CATGACACGAAGAGGGTGAGT 59.726 52.381 0.00 0.00 35.98 3.41
2110 2970 1.410004 TGACACGAAGAGGGTGAGTT 58.590 50.000 0.00 0.00 35.98 3.01
2111 2971 1.068588 TGACACGAAGAGGGTGAGTTG 59.931 52.381 0.00 0.00 35.98 3.16
2112 2972 1.340248 GACACGAAGAGGGTGAGTTGA 59.660 52.381 0.00 0.00 35.98 3.18
2113 2973 1.341531 ACACGAAGAGGGTGAGTTGAG 59.658 52.381 0.00 0.00 38.73 3.02
2114 2974 0.969894 ACGAAGAGGGTGAGTTGAGG 59.030 55.000 0.00 0.00 0.00 3.86
2115 2975 1.257743 CGAAGAGGGTGAGTTGAGGA 58.742 55.000 0.00 0.00 0.00 3.71
2116 2976 1.203523 CGAAGAGGGTGAGTTGAGGAG 59.796 57.143 0.00 0.00 0.00 3.69
2117 2977 2.530701 GAAGAGGGTGAGTTGAGGAGA 58.469 52.381 0.00 0.00 0.00 3.71
2118 2978 2.230130 AGAGGGTGAGTTGAGGAGAG 57.770 55.000 0.00 0.00 0.00 3.20
2119 2979 0.534873 GAGGGTGAGTTGAGGAGAGC 59.465 60.000 0.00 0.00 0.00 4.09
2120 2980 0.116143 AGGGTGAGTTGAGGAGAGCT 59.884 55.000 0.00 0.00 0.00 4.09
2121 2981 0.534873 GGGTGAGTTGAGGAGAGCTC 59.465 60.000 5.27 5.27 0.00 4.09
2149 3009 4.506005 CGCATAACGCACTGGGTA 57.494 55.556 0.00 0.00 42.60 3.69
2150 3010 2.757212 CGCATAACGCACTGGGTAA 58.243 52.632 0.00 0.00 42.60 2.85
2151 3011 0.650512 CGCATAACGCACTGGGTAAG 59.349 55.000 0.00 0.00 42.60 2.34
2152 3012 1.734163 GCATAACGCACTGGGTAAGT 58.266 50.000 0.00 0.00 41.79 2.24
2160 3020 3.978876 ACTGGGTAAGTGGGCAATC 57.021 52.632 0.00 0.00 37.88 2.67
2161 3021 1.072266 ACTGGGTAAGTGGGCAATCA 58.928 50.000 0.00 0.00 37.88 2.57
2162 3022 1.271926 ACTGGGTAAGTGGGCAATCAC 60.272 52.381 0.00 0.00 37.88 3.06
2163 3023 0.774276 TGGGTAAGTGGGCAATCACA 59.226 50.000 6.80 0.00 39.93 3.58
2164 3024 1.173913 GGGTAAGTGGGCAATCACAC 58.826 55.000 6.80 0.00 39.93 3.82
2165 3025 1.546773 GGGTAAGTGGGCAATCACACA 60.547 52.381 0.30 0.00 39.99 3.72
2166 3026 1.539827 GGTAAGTGGGCAATCACACAC 59.460 52.381 0.30 0.00 39.99 3.82
2167 3027 1.539827 GTAAGTGGGCAATCACACACC 59.460 52.381 0.30 0.00 39.99 4.16
2168 3028 0.827507 AAGTGGGCAATCACACACCC 60.828 55.000 0.30 0.00 43.14 4.61
2169 3029 2.117206 TGGGCAATCACACACCCC 59.883 61.111 0.00 0.00 42.07 4.95
2170 3030 2.679996 GGGCAATCACACACCCCC 60.680 66.667 0.00 0.00 36.24 5.40
2171 3031 2.440599 GGCAATCACACACCCCCT 59.559 61.111 0.00 0.00 0.00 4.79
2172 3032 1.678970 GGCAATCACACACCCCCTC 60.679 63.158 0.00 0.00 0.00 4.30
2173 3033 1.678970 GCAATCACACACCCCCTCC 60.679 63.158 0.00 0.00 0.00 4.30
2174 3034 1.000896 CAATCACACACCCCCTCCC 60.001 63.158 0.00 0.00 0.00 4.30
2175 3035 1.151587 AATCACACACCCCCTCCCT 60.152 57.895 0.00 0.00 0.00 4.20
2176 3036 1.500783 AATCACACACCCCCTCCCTG 61.501 60.000 0.00 0.00 0.00 4.45
2177 3037 4.351054 CACACACCCCCTCCCTGC 62.351 72.222 0.00 0.00 0.00 4.85
2178 3038 4.918360 ACACACCCCCTCCCTGCA 62.918 66.667 0.00 0.00 0.00 4.41
2179 3039 3.341629 CACACCCCCTCCCTGCAT 61.342 66.667 0.00 0.00 0.00 3.96
2180 3040 3.341629 ACACCCCCTCCCTGCATG 61.342 66.667 0.00 0.00 0.00 4.06
2181 3041 3.016971 CACCCCCTCCCTGCATGA 61.017 66.667 0.00 0.00 0.00 3.07
2182 3042 2.204291 ACCCCCTCCCTGCATGAA 60.204 61.111 0.00 0.00 0.00 2.57
2183 3043 1.623686 ACCCCCTCCCTGCATGAAT 60.624 57.895 0.00 0.00 0.00 2.57
2184 3044 1.152610 CCCCCTCCCTGCATGAATG 60.153 63.158 0.00 0.00 0.00 2.67
2196 3056 2.427232 CATGAATGCTAAATGGCCGG 57.573 50.000 0.00 0.00 0.00 6.13
2197 3057 0.675633 ATGAATGCTAAATGGCCGGC 59.324 50.000 21.18 21.18 0.00 6.13
2198 3058 1.363807 GAATGCTAAATGGCCGGCC 59.636 57.895 39.40 39.40 0.00 6.13
2199 3059 2.087462 GAATGCTAAATGGCCGGCCC 62.087 60.000 41.75 25.56 34.56 5.80
2212 3072 3.431725 GGCCCAGTGTGCGCTAAC 61.432 66.667 9.73 6.97 0.00 2.34
2213 3073 3.788766 GCCCAGTGTGCGCTAACG 61.789 66.667 9.73 3.72 44.07 3.18
2214 3074 3.118454 CCCAGTGTGCGCTAACGG 61.118 66.667 9.73 11.94 40.57 4.44
2215 3075 2.357034 CCAGTGTGCGCTAACGGT 60.357 61.111 9.73 0.00 40.57 4.83
2216 3076 1.080366 CCAGTGTGCGCTAACGGTA 60.080 57.895 9.73 0.00 40.57 4.02
2217 3077 0.459585 CCAGTGTGCGCTAACGGTAT 60.460 55.000 9.73 0.00 40.57 2.73
2218 3078 0.645355 CAGTGTGCGCTAACGGTATG 59.355 55.000 9.73 0.00 40.57 2.39
2219 3079 0.528924 AGTGTGCGCTAACGGTATGA 59.471 50.000 9.73 0.00 40.57 2.15
2220 3080 0.921347 GTGTGCGCTAACGGTATGAG 59.079 55.000 9.73 0.00 40.57 2.90
2221 3081 0.812549 TGTGCGCTAACGGTATGAGA 59.187 50.000 9.73 0.00 40.57 3.27
2222 3082 1.202256 TGTGCGCTAACGGTATGAGAG 60.202 52.381 9.73 0.00 40.57 3.20
2223 3083 1.065102 GTGCGCTAACGGTATGAGAGA 59.935 52.381 9.73 0.00 40.57 3.10
2224 3084 1.954382 TGCGCTAACGGTATGAGAGAT 59.046 47.619 9.73 0.00 40.57 2.75
2225 3085 2.361119 TGCGCTAACGGTATGAGAGATT 59.639 45.455 9.73 0.00 40.57 2.40
2226 3086 3.181479 TGCGCTAACGGTATGAGAGATTT 60.181 43.478 9.73 0.00 40.57 2.17
2227 3087 3.425858 GCGCTAACGGTATGAGAGATTTC 59.574 47.826 0.00 0.00 40.57 2.17
2228 3088 4.607955 CGCTAACGGTATGAGAGATTTCA 58.392 43.478 0.00 0.00 34.97 2.69
2229 3089 5.041287 CGCTAACGGTATGAGAGATTTCAA 58.959 41.667 0.00 0.00 34.97 2.69
2230 3090 5.518847 CGCTAACGGTATGAGAGATTTCAAA 59.481 40.000 0.00 0.00 34.97 2.69
2231 3091 6.035650 CGCTAACGGTATGAGAGATTTCAAAA 59.964 38.462 0.00 0.00 34.97 2.44
2232 3092 7.412563 CGCTAACGGTATGAGAGATTTCAAAAA 60.413 37.037 0.00 0.00 34.97 1.94
2330 3190 7.920160 AAAATGTCCACAAGTTCAAAAATGT 57.080 28.000 0.00 0.00 0.00 2.71
2331 3191 7.920160 AAATGTCCACAAGTTCAAAAATGTT 57.080 28.000 0.00 0.00 0.00 2.71
2332 3192 7.920160 AATGTCCACAAGTTCAAAAATGTTT 57.080 28.000 0.00 0.00 0.00 2.83
2333 3193 6.718454 TGTCCACAAGTTCAAAAATGTTTG 57.282 33.333 1.55 1.55 44.71 2.93
2334 3194 6.226787 TGTCCACAAGTTCAAAAATGTTTGT 58.773 32.000 8.22 0.00 43.90 2.83
2335 3195 6.146837 TGTCCACAAGTTCAAAAATGTTTGTG 59.853 34.615 8.22 7.89 43.90 3.33
2336 3196 6.367422 GTCCACAAGTTCAAAAATGTTTGTGA 59.633 34.615 14.62 3.37 44.85 3.58
2337 3197 6.931281 TCCACAAGTTCAAAAATGTTTGTGAA 59.069 30.769 14.62 6.93 44.85 3.18
2338 3198 7.605691 TCCACAAGTTCAAAAATGTTTGTGAAT 59.394 29.630 12.74 0.00 43.90 2.57
2339 3199 8.235905 CCACAAGTTCAAAAATGTTTGTGAATT 58.764 29.630 12.74 7.30 43.90 2.17
2340 3200 9.264782 CACAAGTTCAAAAATGTTTGTGAATTC 57.735 29.630 12.74 0.00 43.90 2.17
2341 3201 8.997323 ACAAGTTCAAAAATGTTTGTGAATTCA 58.003 25.926 12.74 3.38 43.90 2.57
2342 3202 9.480538 CAAGTTCAAAAATGTTTGTGAATTCAG 57.519 29.630 8.80 4.16 43.90 3.02
2343 3203 9.434420 AAGTTCAAAAATGTTTGTGAATTCAGA 57.566 25.926 8.80 4.42 43.90 3.27
2344 3204 9.090692 AGTTCAAAAATGTTTGTGAATTCAGAG 57.909 29.630 8.80 0.00 43.90 3.35
2345 3205 9.086336 GTTCAAAAATGTTTGTGAATTCAGAGA 57.914 29.630 8.80 0.00 43.90 3.10
2346 3206 9.650539 TTCAAAAATGTTTGTGAATTCAGAGAA 57.349 25.926 8.80 1.48 43.90 2.87
2347 3207 9.820725 TCAAAAATGTTTGTGAATTCAGAGAAT 57.179 25.926 8.80 0.00 43.90 2.40
2348 3208 9.858247 CAAAAATGTTTGTGAATTCAGAGAATG 57.142 29.630 8.80 0.00 39.49 2.67
2349 3209 9.603921 AAAAATGTTTGTGAATTCAGAGAATGT 57.396 25.926 8.80 0.00 0.00 2.71
2350 3210 9.603921 AAAATGTTTGTGAATTCAGAGAATGTT 57.396 25.926 8.80 1.70 0.00 2.71
2351 3211 8.807667 AATGTTTGTGAATTCAGAGAATGTTC 57.192 30.769 8.80 0.00 0.00 3.18
2352 3212 7.332213 TGTTTGTGAATTCAGAGAATGTTCA 57.668 32.000 8.80 0.00 0.00 3.18
2353 3213 7.195646 TGTTTGTGAATTCAGAGAATGTTCAC 58.804 34.615 8.80 14.61 41.71 3.18
2354 3214 6.940831 TTGTGAATTCAGAGAATGTTCACA 57.059 33.333 17.94 17.94 45.70 3.58
2355 3215 6.940831 TGTGAATTCAGAGAATGTTCACAA 57.059 33.333 18.89 8.86 45.02 3.33
2356 3216 7.514784 TGTGAATTCAGAGAATGTTCACAAT 57.485 32.000 18.89 0.00 45.02 2.71
2357 3217 7.944061 TGTGAATTCAGAGAATGTTCACAATT 58.056 30.769 18.89 0.00 45.02 2.32
2358 3218 8.077991 TGTGAATTCAGAGAATGTTCACAATTC 58.922 33.333 18.89 7.11 45.02 2.17
2359 3219 8.077991 GTGAATTCAGAGAATGTTCACAATTCA 58.922 33.333 8.80 11.17 41.32 2.57
2360 3220 8.631797 TGAATTCAGAGAATGTTCACAATTCAA 58.368 29.630 3.38 3.01 36.03 2.69
2361 3221 9.467258 GAATTCAGAGAATGTTCACAATTCAAA 57.533 29.630 0.00 0.00 32.77 2.69
2362 3222 9.820725 AATTCAGAGAATGTTCACAATTCAAAA 57.179 25.926 0.00 0.00 0.00 2.44
2363 3223 9.820725 ATTCAGAGAATGTTCACAATTCAAAAA 57.179 25.926 0.00 0.00 0.00 1.94
2364 3224 8.633075 TCAGAGAATGTTCACAATTCAAAAAC 57.367 30.769 0.00 0.00 0.00 2.43
2365 3225 8.469200 TCAGAGAATGTTCACAATTCAAAAACT 58.531 29.630 0.00 0.00 0.00 2.66
2366 3226 9.734620 CAGAGAATGTTCACAATTCAAAAACTA 57.265 29.630 0.00 0.00 0.00 2.24
2372 3232 8.334016 TGTTCACAATTCAAAAACTATTCACG 57.666 30.769 0.00 0.00 0.00 4.35
2373 3233 8.184848 TGTTCACAATTCAAAAACTATTCACGA 58.815 29.630 0.00 0.00 0.00 4.35
2374 3234 9.015577 GTTCACAATTCAAAAACTATTCACGAA 57.984 29.630 0.00 0.00 0.00 3.85
2375 3235 9.743057 TTCACAATTCAAAAACTATTCACGAAT 57.257 25.926 0.00 0.00 34.93 3.34
2376 3236 9.743057 TCACAATTCAAAAACTATTCACGAATT 57.257 25.926 0.00 0.00 33.18 2.17
2406 3266 9.497030 AAAATGTTTTCAAATAAAAAGGTTCGC 57.503 25.926 0.00 0.00 0.00 4.70
2407 3267 7.778470 ATGTTTTCAAATAAAAAGGTTCGCA 57.222 28.000 0.00 0.00 0.00 5.10
2408 3268 7.596749 TGTTTTCAAATAAAAAGGTTCGCAA 57.403 28.000 0.00 0.00 0.00 4.85
2409 3269 8.029642 TGTTTTCAAATAAAAAGGTTCGCAAA 57.970 26.923 0.00 0.00 0.00 3.68
2410 3270 7.958025 TGTTTTCAAATAAAAAGGTTCGCAAAC 59.042 29.630 0.00 0.00 34.46 2.93
2411 3271 7.835634 TTTCAAATAAAAAGGTTCGCAAACT 57.164 28.000 0.00 0.00 35.61 2.66
2412 3272 7.458038 TTCAAATAAAAAGGTTCGCAAACTC 57.542 32.000 0.00 0.00 35.61 3.01
2413 3273 6.565234 TCAAATAAAAAGGTTCGCAAACTCA 58.435 32.000 0.00 0.00 35.61 3.41
2414 3274 7.036220 TCAAATAAAAAGGTTCGCAAACTCAA 58.964 30.769 0.00 0.00 35.61 3.02
2415 3275 7.545965 TCAAATAAAAAGGTTCGCAAACTCAAA 59.454 29.630 0.00 0.00 35.61 2.69
2416 3276 7.835634 AATAAAAAGGTTCGCAAACTCAAAA 57.164 28.000 0.00 0.00 35.61 2.44
2417 3277 7.835634 ATAAAAAGGTTCGCAAACTCAAAAA 57.164 28.000 0.00 0.00 35.61 1.94
2418 3278 5.778161 AAAAGGTTCGCAAACTCAAAAAG 57.222 34.783 0.00 0.00 35.61 2.27
2419 3279 4.450082 AAGGTTCGCAAACTCAAAAAGT 57.550 36.364 0.00 0.00 41.10 2.66
2420 3280 3.769536 AGGTTCGCAAACTCAAAAAGTG 58.230 40.909 0.00 0.00 38.58 3.16
2421 3281 3.192633 AGGTTCGCAAACTCAAAAAGTGT 59.807 39.130 0.00 0.00 38.58 3.55
2422 3282 3.924073 GGTTCGCAAACTCAAAAAGTGTT 59.076 39.130 0.00 0.00 38.58 3.32
2423 3283 4.387559 GGTTCGCAAACTCAAAAAGTGTTT 59.612 37.500 0.00 0.00 42.78 2.83
2440 3300 7.509050 AAGTGTTTGCAATTTTTGAAAATGC 57.491 28.000 0.00 8.80 40.17 3.56
2441 3301 6.854778 AGTGTTTGCAATTTTTGAAAATGCT 58.145 28.000 14.88 1.10 40.17 3.79
2442 3302 6.968335 AGTGTTTGCAATTTTTGAAAATGCTC 59.032 30.769 14.88 8.03 40.17 4.26
2443 3303 6.746364 GTGTTTGCAATTTTTGAAAATGCTCA 59.254 30.769 14.88 9.84 40.17 4.26
2444 3304 6.746364 TGTTTGCAATTTTTGAAAATGCTCAC 59.254 30.769 14.88 11.89 40.17 3.51
2445 3305 6.432607 TTGCAATTTTTGAAAATGCTCACA 57.567 29.167 14.88 0.00 38.53 3.58
2446 3306 6.432607 TGCAATTTTTGAAAATGCTCACAA 57.567 29.167 14.88 0.00 38.53 3.33
2447 3307 6.849502 TGCAATTTTTGAAAATGCTCACAAA 58.150 28.000 14.88 0.00 38.53 2.83
2448 3308 6.967767 TGCAATTTTTGAAAATGCTCACAAAG 59.032 30.769 14.88 0.00 38.53 2.77
2449 3309 6.968335 GCAATTTTTGAAAATGCTCACAAAGT 59.032 30.769 8.53 0.00 38.53 2.66
2450 3310 8.121708 GCAATTTTTGAAAATGCTCACAAAGTA 58.878 29.630 8.53 0.00 38.53 2.24
2451 3311 9.985318 CAATTTTTGAAAATGCTCACAAAGTAA 57.015 25.926 2.71 0.00 38.53 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.720202 TCACGAACAATTGTGAGCTAGTAT 58.280 37.500 12.82 0.00 43.57 2.12
170 177 3.349022 TCCTTGTTGGTTTTCTGTTCGT 58.651 40.909 0.00 0.00 37.07 3.85
178 185 7.125053 TCCTTTCACTATTTCCTTGTTGGTTTT 59.875 33.333 0.00 0.00 37.07 2.43
211 218 1.087501 CGGTTTTGGAAGCTCTAGCC 58.912 55.000 0.00 0.00 43.38 3.93
218 225 2.077821 TTTCCGCCGGTTTTGGAAGC 62.078 55.000 1.63 0.00 42.36 3.86
219 226 0.318360 GTTTCCGCCGGTTTTGGAAG 60.318 55.000 1.63 0.00 42.36 3.46
220 227 1.734748 GTTTCCGCCGGTTTTGGAA 59.265 52.632 1.63 13.32 39.91 3.53
232 264 2.824041 CAGGCGGGATGGTTTCCG 60.824 66.667 0.00 0.00 46.52 4.30
269 323 2.222376 GCGAGCGATACGATAGCAATTG 60.222 50.000 9.20 0.00 42.66 2.32
323 872 6.795399 ACCAATTGACAAATCATCGGTTATC 58.205 36.000 7.12 0.00 33.85 1.75
324 873 6.773976 ACCAATTGACAAATCATCGGTTAT 57.226 33.333 7.12 0.00 33.85 1.89
325 874 7.338196 ACATACCAATTGACAAATCATCGGTTA 59.662 33.333 7.12 0.00 34.51 2.85
327 876 5.652014 ACATACCAATTGACAAATCATCGGT 59.348 36.000 7.12 0.00 35.93 4.69
330 879 8.984891 TCAAACATACCAATTGACAAATCATC 57.015 30.769 7.12 0.00 33.85 2.92
331 880 9.947433 ATTCAAACATACCAATTGACAAATCAT 57.053 25.926 7.12 0.00 33.85 2.45
332 881 9.775854 AATTCAAACATACCAATTGACAAATCA 57.224 25.926 7.12 0.00 33.13 2.57
334 883 8.924691 CGAATTCAAACATACCAATTGACAAAT 58.075 29.630 7.12 0.00 33.13 2.32
336 885 7.380870 CACGAATTCAAACATACCAATTGACAA 59.619 33.333 7.12 0.00 33.13 3.18
337 886 6.860539 CACGAATTCAAACATACCAATTGACA 59.139 34.615 7.12 0.00 33.13 3.58
339 888 7.208225 TCACGAATTCAAACATACCAATTGA 57.792 32.000 7.12 0.00 0.00 2.57
340 889 7.807433 TCTTCACGAATTCAAACATACCAATTG 59.193 33.333 6.22 0.00 0.00 2.32
341 890 7.881142 TCTTCACGAATTCAAACATACCAATT 58.119 30.769 6.22 0.00 0.00 2.32
342 891 7.447374 TCTTCACGAATTCAAACATACCAAT 57.553 32.000 6.22 0.00 0.00 3.16
343 892 6.869315 TCTTCACGAATTCAAACATACCAA 57.131 33.333 6.22 0.00 0.00 3.67
375 1049 4.440758 CGTGAGTGTCAAAAATTGCGAATT 59.559 37.500 0.00 0.00 0.00 2.17
382 1056 4.739716 GTCAATGCGTGAGTGTCAAAAATT 59.260 37.500 0.00 0.00 36.74 1.82
389 1067 1.626654 CCCGTCAATGCGTGAGTGTC 61.627 60.000 0.00 0.00 36.74 3.67
429 1107 4.489771 GCACCTACGGGCATGCCT 62.490 66.667 34.70 19.81 35.63 4.75
446 1124 0.665068 AATGCACATGCGCAGTTGTG 60.665 50.000 30.57 30.57 46.99 3.33
447 1125 0.387622 GAATGCACATGCGCAGTTGT 60.388 50.000 18.32 14.17 46.99 3.32
448 1126 1.074319 GGAATGCACATGCGCAGTTG 61.074 55.000 18.32 16.39 46.99 3.16
451 1129 1.096967 TAGGGAATGCACATGCGCAG 61.097 55.000 18.32 10.85 46.99 5.18
455 1192 0.395586 TGGGTAGGGAATGCACATGC 60.396 55.000 0.00 0.00 42.50 4.06
481 1218 3.719268 TGGGATAGCACATGTGAGTTT 57.281 42.857 29.80 13.01 0.00 2.66
482 1219 3.939740 ATGGGATAGCACATGTGAGTT 57.060 42.857 29.80 15.42 36.60 3.01
483 1220 3.939740 AATGGGATAGCACATGTGAGT 57.060 42.857 29.80 17.19 37.08 3.41
551 1288 2.093306 TTCGGCGAGTGAAATGTGAT 57.907 45.000 10.46 0.00 0.00 3.06
565 1302 4.404654 CCGGTGCTTGCTTTCGGC 62.405 66.667 0.00 0.00 42.22 5.54
639 1376 5.501156 AGTCTATGAATTTTCCCAGTCACC 58.499 41.667 0.00 0.00 0.00 4.02
658 1410 8.152023 AGAAAAGTAGTGATTCCCAATAGTCT 57.848 34.615 0.00 0.00 29.58 3.24
673 1425 4.887071 TGTCATGGTTGCAAGAAAAGTAGT 59.113 37.500 0.00 0.00 0.00 2.73
674 1426 5.437289 TGTCATGGTTGCAAGAAAAGTAG 57.563 39.130 0.00 0.00 0.00 2.57
718 1470 9.582648 TGTTTTTCCCTTAGATAGCTTAACTTT 57.417 29.630 0.00 0.00 0.00 2.66
719 1471 9.011095 GTGTTTTTCCCTTAGATAGCTTAACTT 57.989 33.333 0.00 0.00 0.00 2.66
720 1472 8.161425 TGTGTTTTTCCCTTAGATAGCTTAACT 58.839 33.333 0.00 0.00 0.00 2.24
734 1486 3.096092 TCAGCTTTGTGTGTTTTTCCCT 58.904 40.909 0.00 0.00 0.00 4.20
735 1487 3.518634 TCAGCTTTGTGTGTTTTTCCC 57.481 42.857 0.00 0.00 0.00 3.97
736 1488 4.507756 GGAATCAGCTTTGTGTGTTTTTCC 59.492 41.667 0.00 0.00 0.00 3.13
737 1489 5.351458 AGGAATCAGCTTTGTGTGTTTTTC 58.649 37.500 0.00 0.00 0.00 2.29
739 1491 5.343307 AAGGAATCAGCTTTGTGTGTTTT 57.657 34.783 0.00 0.00 0.00 2.43
762 1531 4.002506 TCGCACGCCCACTCACAT 62.003 61.111 0.00 0.00 0.00 3.21
784 1553 1.021390 GGAGGCCATGTCGTCAACTG 61.021 60.000 5.01 0.00 0.00 3.16
789 1558 2.509336 CGTGGAGGCCATGTCGTC 60.509 66.667 5.01 0.00 35.92 4.20
803 1572 4.969196 ACTCCCAGTGCGTGCGTG 62.969 66.667 0.00 0.00 0.00 5.34
804 1573 4.969196 CACTCCCAGTGCGTGCGT 62.969 66.667 0.00 0.00 39.62 5.24
840 1609 0.746563 TCGCTTTGCCTTTATCCCGG 60.747 55.000 0.00 0.00 0.00 5.73
871 1640 2.598589 CATTTTGTGCAGTCGGAATGG 58.401 47.619 7.62 0.00 0.00 3.16
912 1681 2.893449 GCGCGGCTATTTGTAGGCC 61.893 63.158 8.83 0.00 42.18 5.19
944 1716 3.449227 CGTGCTCTGGGCTACCGA 61.449 66.667 0.00 0.00 42.39 4.69
948 1732 0.106469 ATCTCTCGTGCTCTGGGCTA 60.106 55.000 0.00 0.00 42.39 3.93
951 1735 1.098129 TCGATCTCTCGTGCTCTGGG 61.098 60.000 0.00 0.00 45.25 4.45
985 1769 0.809636 TCCATGCGCTCCGTGTTATG 60.810 55.000 9.73 0.40 0.00 1.90
987 1771 1.447140 GTCCATGCGCTCCGTGTTA 60.447 57.895 9.73 0.00 0.00 2.41
988 1772 2.742372 GTCCATGCGCTCCGTGTT 60.742 61.111 9.73 0.00 0.00 3.32
1175 1969 1.382420 AGCTTCAGGCCGATCTCCT 60.382 57.895 0.00 0.00 43.05 3.69
1221 2015 0.107993 CGATGGTGCAGATGGAGTGT 60.108 55.000 0.00 0.00 0.00 3.55
1356 2150 1.668751 GCAAAAGGACGTGTGACTGAA 59.331 47.619 0.00 0.00 0.00 3.02
1377 2176 7.616935 AGTCACATCAAAAACCCATCTCATAAT 59.383 33.333 0.00 0.00 0.00 1.28
1380 2179 5.327732 AGTCACATCAAAAACCCATCTCAT 58.672 37.500 0.00 0.00 0.00 2.90
1533 2378 2.154567 AGCATCCAAGCATCCACATT 57.845 45.000 0.00 0.00 36.85 2.71
1609 2454 0.541392 AGGATGCCGCTACATGAACA 59.459 50.000 0.00 0.00 0.00 3.18
1621 2466 6.461509 CCACCAACTTTATTATTCAGGATGCC 60.462 42.308 0.00 0.00 34.76 4.40
1658 2507 1.052287 GCAAAATTCAGTTCCGCGTG 58.948 50.000 4.92 0.00 0.00 5.34
1662 2511 5.236047 TGGAAAATTGCAAAATTCAGTTCCG 59.764 36.000 21.83 0.00 30.16 4.30
1712 2570 7.723172 AGCACATGAAAATTTCCCCAAATTTAA 59.277 29.630 0.00 0.25 46.93 1.52
1717 2577 4.141528 ACAGCACATGAAAATTTCCCCAAA 60.142 37.500 0.00 0.00 0.00 3.28
1723 2583 4.255833 TCCCACAGCACATGAAAATTTC 57.744 40.909 0.00 0.00 0.00 2.17
1739 2599 2.054453 GCAGGGGCAGAAATCCCAC 61.054 63.158 0.00 0.00 45.73 4.61
1786 2646 9.302345 CATTCTAGTACACAACAACGAATCTAT 57.698 33.333 0.00 0.00 0.00 1.98
1787 2647 8.301720 ACATTCTAGTACACAACAACGAATCTA 58.698 33.333 0.00 0.00 0.00 1.98
1788 2648 7.116376 CACATTCTAGTACACAACAACGAATCT 59.884 37.037 0.00 0.00 0.00 2.40
1789 2649 7.227461 CACATTCTAGTACACAACAACGAATC 58.773 38.462 0.00 0.00 0.00 2.52
1790 2650 6.347402 GCACATTCTAGTACACAACAACGAAT 60.347 38.462 0.00 0.00 0.00 3.34
1791 2651 5.050634 GCACATTCTAGTACACAACAACGAA 60.051 40.000 0.00 0.00 0.00 3.85
1792 2652 4.446385 GCACATTCTAGTACACAACAACGA 59.554 41.667 0.00 0.00 0.00 3.85
1793 2653 4.447724 AGCACATTCTAGTACACAACAACG 59.552 41.667 0.00 0.00 0.00 4.10
1794 2654 5.924475 AGCACATTCTAGTACACAACAAC 57.076 39.130 0.00 0.00 0.00 3.32
1795 2655 6.755206 ACTAGCACATTCTAGTACACAACAA 58.245 36.000 0.00 0.00 45.30 2.83
1796 2656 6.340962 ACTAGCACATTCTAGTACACAACA 57.659 37.500 0.00 0.00 45.30 3.33
1797 2657 8.808529 CATAACTAGCACATTCTAGTACACAAC 58.191 37.037 4.15 0.00 46.12 3.32
1798 2658 7.491372 GCATAACTAGCACATTCTAGTACACAA 59.509 37.037 4.15 0.00 46.12 3.33
1799 2659 6.978659 GCATAACTAGCACATTCTAGTACACA 59.021 38.462 4.15 0.00 46.12 3.72
1800 2660 6.421202 GGCATAACTAGCACATTCTAGTACAC 59.579 42.308 4.15 0.00 46.12 2.90
1801 2661 6.513180 GGCATAACTAGCACATTCTAGTACA 58.487 40.000 4.15 0.00 46.12 2.90
1802 2662 5.629849 CGGCATAACTAGCACATTCTAGTAC 59.370 44.000 4.15 0.00 46.12 2.73
1803 2663 5.533528 TCGGCATAACTAGCACATTCTAGTA 59.466 40.000 4.15 0.00 46.12 1.82
1805 2665 4.871513 TCGGCATAACTAGCACATTCTAG 58.128 43.478 0.00 0.00 41.31 2.43
1806 2666 4.929819 TCGGCATAACTAGCACATTCTA 57.070 40.909 0.00 0.00 0.00 2.10
1807 2667 3.819564 TCGGCATAACTAGCACATTCT 57.180 42.857 0.00 0.00 0.00 2.40
1808 2668 3.364366 GCATCGGCATAACTAGCACATTC 60.364 47.826 0.00 0.00 40.72 2.67
1809 2669 2.549754 GCATCGGCATAACTAGCACATT 59.450 45.455 0.00 0.00 40.72 2.71
1810 2670 2.146342 GCATCGGCATAACTAGCACAT 58.854 47.619 0.00 0.00 40.72 3.21
1811 2671 1.581934 GCATCGGCATAACTAGCACA 58.418 50.000 0.00 0.00 40.72 4.57
1812 2672 0.868406 GGCATCGGCATAACTAGCAC 59.132 55.000 0.00 0.00 43.71 4.40
1813 2673 0.467804 TGGCATCGGCATAACTAGCA 59.532 50.000 0.00 0.00 43.71 3.49
1814 2674 1.151668 CTGGCATCGGCATAACTAGC 58.848 55.000 0.00 0.00 43.71 3.42
1815 2675 2.820059 TCTGGCATCGGCATAACTAG 57.180 50.000 0.00 0.00 43.71 2.57
1816 2676 2.871637 GCATCTGGCATCGGCATAACTA 60.872 50.000 0.00 0.00 43.71 2.24
1817 2677 1.888215 CATCTGGCATCGGCATAACT 58.112 50.000 0.00 0.00 43.71 2.24
1818 2678 0.239347 GCATCTGGCATCGGCATAAC 59.761 55.000 0.00 0.00 43.71 1.89
1819 2679 2.632643 GCATCTGGCATCGGCATAA 58.367 52.632 0.00 0.00 43.71 1.90
1820 2680 2.054473 TGGCATCTGGCATCGGCATA 62.054 55.000 1.83 0.00 46.12 3.14
1821 2681 3.424780 TGGCATCTGGCATCGGCAT 62.425 57.895 1.83 0.00 46.12 4.40
1822 2682 4.112433 TGGCATCTGGCATCGGCA 62.112 61.111 1.83 3.56 46.12 5.69
1829 2689 3.128349 CTGCATTTTATTGGCATCTGGC 58.872 45.455 0.00 0.00 43.74 4.85
1830 2690 3.128349 GCTGCATTTTATTGGCATCTGG 58.872 45.455 0.00 0.00 36.87 3.86
1831 2691 4.049186 GAGCTGCATTTTATTGGCATCTG 58.951 43.478 1.02 0.00 34.50 2.90
1832 2692 3.702548 TGAGCTGCATTTTATTGGCATCT 59.297 39.130 1.02 0.00 36.78 2.90
1833 2693 4.049546 TGAGCTGCATTTTATTGGCATC 57.950 40.909 1.02 0.00 36.87 3.91
1834 2694 4.475051 TTGAGCTGCATTTTATTGGCAT 57.525 36.364 1.02 0.00 36.87 4.40
1835 2695 3.957591 TTGAGCTGCATTTTATTGGCA 57.042 38.095 1.02 0.00 35.96 4.92
1836 2696 4.497300 TCTTTGAGCTGCATTTTATTGGC 58.503 39.130 1.02 0.00 0.00 4.52
1837 2697 7.424227 TTTTCTTTGAGCTGCATTTTATTGG 57.576 32.000 1.02 0.00 0.00 3.16
1838 2698 7.480542 GCATTTTCTTTGAGCTGCATTTTATTG 59.519 33.333 1.02 0.00 0.00 1.90
1839 2699 7.361457 GGCATTTTCTTTGAGCTGCATTTTATT 60.361 33.333 1.02 0.00 0.00 1.40
1840 2700 6.093082 GGCATTTTCTTTGAGCTGCATTTTAT 59.907 34.615 1.02 0.00 0.00 1.40
1841 2701 5.409214 GGCATTTTCTTTGAGCTGCATTTTA 59.591 36.000 1.02 0.00 0.00 1.52
1842 2702 4.214758 GGCATTTTCTTTGAGCTGCATTTT 59.785 37.500 1.02 0.00 0.00 1.82
1843 2703 3.749609 GGCATTTTCTTTGAGCTGCATTT 59.250 39.130 1.02 0.00 0.00 2.32
1844 2704 3.244284 TGGCATTTTCTTTGAGCTGCATT 60.244 39.130 1.02 0.00 0.00 3.56
1845 2705 2.300723 TGGCATTTTCTTTGAGCTGCAT 59.699 40.909 1.02 0.00 0.00 3.96
1846 2706 1.687660 TGGCATTTTCTTTGAGCTGCA 59.312 42.857 1.02 0.00 0.00 4.41
1847 2707 2.064014 GTGGCATTTTCTTTGAGCTGC 58.936 47.619 0.00 0.00 0.00 5.25
1848 2708 3.655276 AGTGGCATTTTCTTTGAGCTG 57.345 42.857 0.00 0.00 0.00 4.24
1849 2709 4.144297 TGTAGTGGCATTTTCTTTGAGCT 58.856 39.130 0.00 0.00 0.00 4.09
1850 2710 4.503741 TGTAGTGGCATTTTCTTTGAGC 57.496 40.909 0.00 0.00 0.00 4.26
1851 2711 6.095377 GGATTGTAGTGGCATTTTCTTTGAG 58.905 40.000 0.00 0.00 0.00 3.02
1852 2712 5.538053 TGGATTGTAGTGGCATTTTCTTTGA 59.462 36.000 0.00 0.00 0.00 2.69
1853 2713 5.782047 TGGATTGTAGTGGCATTTTCTTTG 58.218 37.500 0.00 0.00 0.00 2.77
1854 2714 6.418057 TTGGATTGTAGTGGCATTTTCTTT 57.582 33.333 0.00 0.00 0.00 2.52
1855 2715 6.014327 ACATTGGATTGTAGTGGCATTTTCTT 60.014 34.615 0.00 0.00 0.00 2.52
1856 2716 5.481473 ACATTGGATTGTAGTGGCATTTTCT 59.519 36.000 0.00 0.00 0.00 2.52
1857 2717 5.723295 ACATTGGATTGTAGTGGCATTTTC 58.277 37.500 0.00 0.00 0.00 2.29
1858 2718 5.743636 ACATTGGATTGTAGTGGCATTTT 57.256 34.783 0.00 0.00 0.00 1.82
1859 2719 5.743636 AACATTGGATTGTAGTGGCATTT 57.256 34.783 0.00 0.00 0.00 2.32
1860 2720 6.210385 TGTTAACATTGGATTGTAGTGGCATT 59.790 34.615 3.59 0.00 0.00 3.56
1861 2721 5.714333 TGTTAACATTGGATTGTAGTGGCAT 59.286 36.000 3.59 0.00 0.00 4.40
1862 2722 5.048364 GTGTTAACATTGGATTGTAGTGGCA 60.048 40.000 12.26 0.00 0.00 4.92
1863 2723 5.048364 TGTGTTAACATTGGATTGTAGTGGC 60.048 40.000 12.26 0.00 0.00 5.01
1864 2724 6.567687 TGTGTTAACATTGGATTGTAGTGG 57.432 37.500 12.26 0.00 0.00 4.00
1865 2725 8.349245 TCTTTGTGTTAACATTGGATTGTAGTG 58.651 33.333 12.26 0.00 35.83 2.74
1866 2726 8.458573 TCTTTGTGTTAACATTGGATTGTAGT 57.541 30.769 12.26 0.00 35.83 2.73
1867 2727 9.559958 GATCTTTGTGTTAACATTGGATTGTAG 57.440 33.333 12.26 0.67 35.83 2.74
1868 2728 9.072375 TGATCTTTGTGTTAACATTGGATTGTA 57.928 29.630 12.26 3.16 35.83 2.41
1869 2729 7.950512 TGATCTTTGTGTTAACATTGGATTGT 58.049 30.769 12.26 0.00 35.83 2.71
1870 2730 8.298854 TCTGATCTTTGTGTTAACATTGGATTG 58.701 33.333 12.26 9.97 35.83 2.67
1871 2731 8.408043 TCTGATCTTTGTGTTAACATTGGATT 57.592 30.769 12.26 0.00 35.83 3.01
1872 2732 8.408043 TTCTGATCTTTGTGTTAACATTGGAT 57.592 30.769 12.26 12.50 35.83 3.41
1873 2733 7.815840 TTCTGATCTTTGTGTTAACATTGGA 57.184 32.000 12.26 8.48 35.83 3.53
1874 2734 8.870160 TTTTCTGATCTTTGTGTTAACATTGG 57.130 30.769 12.26 3.36 35.83 3.16
1897 2757 9.892130 TCATTGGTTGGTTATTGTTTAGTTTTT 57.108 25.926 0.00 0.00 0.00 1.94
1899 2759 9.487790 CATCATTGGTTGGTTATTGTTTAGTTT 57.512 29.630 0.00 0.00 0.00 2.66
1900 2760 8.646900 ACATCATTGGTTGGTTATTGTTTAGTT 58.353 29.630 0.00 0.00 0.00 2.24
1901 2761 8.189119 ACATCATTGGTTGGTTATTGTTTAGT 57.811 30.769 0.00 0.00 0.00 2.24
1902 2762 8.924691 CAACATCATTGGTTGGTTATTGTTTAG 58.075 33.333 0.00 0.00 41.41 1.85
1903 2763 7.386299 GCAACATCATTGGTTGGTTATTGTTTA 59.614 33.333 7.31 0.00 44.41 2.01
1904 2764 6.204495 GCAACATCATTGGTTGGTTATTGTTT 59.796 34.615 7.31 0.00 44.41 2.83
1905 2765 5.700373 GCAACATCATTGGTTGGTTATTGTT 59.300 36.000 7.31 0.00 44.41 2.83
1906 2766 5.221601 TGCAACATCATTGGTTGGTTATTGT 60.222 36.000 7.31 0.00 44.41 2.71
1907 2767 5.236282 TGCAACATCATTGGTTGGTTATTG 58.764 37.500 7.31 0.00 44.41 1.90
1908 2768 5.480642 TGCAACATCATTGGTTGGTTATT 57.519 34.783 7.31 0.00 44.41 1.40
1909 2769 5.011943 ACTTGCAACATCATTGGTTGGTTAT 59.988 36.000 0.00 0.00 44.41 1.89
1910 2770 4.343526 ACTTGCAACATCATTGGTTGGTTA 59.656 37.500 0.00 0.00 44.41 2.85
1911 2771 3.134442 ACTTGCAACATCATTGGTTGGTT 59.866 39.130 0.00 0.00 44.41 3.67
1912 2772 2.699846 ACTTGCAACATCATTGGTTGGT 59.300 40.909 0.00 0.00 44.41 3.67
1913 2773 3.389925 ACTTGCAACATCATTGGTTGG 57.610 42.857 0.00 0.00 44.41 3.77
1914 2774 5.472148 ACATACTTGCAACATCATTGGTTG 58.528 37.500 0.00 0.00 46.41 3.77
1915 2775 5.726980 ACATACTTGCAACATCATTGGTT 57.273 34.783 0.00 0.00 0.00 3.67
1916 2776 5.243507 TCAACATACTTGCAACATCATTGGT 59.756 36.000 0.00 0.00 0.00 3.67
1917 2777 5.712004 TCAACATACTTGCAACATCATTGG 58.288 37.500 0.00 0.00 0.00 3.16
1918 2778 7.030768 TGATCAACATACTTGCAACATCATTG 58.969 34.615 0.00 0.00 0.00 2.82
1919 2779 7.160547 TGATCAACATACTTGCAACATCATT 57.839 32.000 0.00 0.00 0.00 2.57
1920 2780 6.762702 TGATCAACATACTTGCAACATCAT 57.237 33.333 0.00 0.00 0.00 2.45
1921 2781 6.572167 TTGATCAACATACTTGCAACATCA 57.428 33.333 3.38 0.00 0.00 3.07
1922 2782 6.032775 CGTTTGATCAACATACTTGCAACATC 59.967 38.462 7.89 0.00 34.68 3.06
1923 2783 5.858049 CGTTTGATCAACATACTTGCAACAT 59.142 36.000 7.89 0.00 34.68 2.71
1924 2784 5.211454 CGTTTGATCAACATACTTGCAACA 58.789 37.500 7.89 0.00 34.68 3.33
1925 2785 4.088496 GCGTTTGATCAACATACTTGCAAC 59.912 41.667 7.89 0.00 34.68 4.17
1926 2786 4.225984 GCGTTTGATCAACATACTTGCAA 58.774 39.130 7.89 0.00 34.68 4.08
1927 2787 3.251972 TGCGTTTGATCAACATACTTGCA 59.748 39.130 7.89 7.34 34.68 4.08
1928 2788 3.820689 TGCGTTTGATCAACATACTTGC 58.179 40.909 7.89 4.88 34.68 4.01
1929 2789 8.446489 TTTAATGCGTTTGATCAACATACTTG 57.554 30.769 7.89 0.00 34.68 3.16
1954 2814 9.726438 CGGAGGGAGTAGAAATTATCAAAATAT 57.274 33.333 0.00 0.00 0.00 1.28
1955 2815 8.711170 ACGGAGGGAGTAGAAATTATCAAAATA 58.289 33.333 0.00 0.00 0.00 1.40
1956 2816 7.574607 ACGGAGGGAGTAGAAATTATCAAAAT 58.425 34.615 0.00 0.00 0.00 1.82
1957 2817 6.954232 ACGGAGGGAGTAGAAATTATCAAAA 58.046 36.000 0.00 0.00 0.00 2.44
1958 2818 6.407752 GGACGGAGGGAGTAGAAATTATCAAA 60.408 42.308 0.00 0.00 0.00 2.69
1959 2819 5.070047 GGACGGAGGGAGTAGAAATTATCAA 59.930 44.000 0.00 0.00 0.00 2.57
1960 2820 4.587684 GGACGGAGGGAGTAGAAATTATCA 59.412 45.833 0.00 0.00 0.00 2.15
1961 2821 4.021280 GGGACGGAGGGAGTAGAAATTATC 60.021 50.000 0.00 0.00 0.00 1.75
1962 2822 3.902467 GGGACGGAGGGAGTAGAAATTAT 59.098 47.826 0.00 0.00 0.00 1.28
1963 2823 3.303049 GGGACGGAGGGAGTAGAAATTA 58.697 50.000 0.00 0.00 0.00 1.40
1964 2824 2.117051 GGGACGGAGGGAGTAGAAATT 58.883 52.381 0.00 0.00 0.00 1.82
1965 2825 1.007963 TGGGACGGAGGGAGTAGAAAT 59.992 52.381 0.00 0.00 0.00 2.17
1966 2826 0.410663 TGGGACGGAGGGAGTAGAAA 59.589 55.000 0.00 0.00 0.00 2.52
1967 2827 0.635009 ATGGGACGGAGGGAGTAGAA 59.365 55.000 0.00 0.00 0.00 2.10
1968 2828 1.526315 TATGGGACGGAGGGAGTAGA 58.474 55.000 0.00 0.00 0.00 2.59
1969 2829 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
1970 2830 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
1971 2831 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
1972 2832 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
1973 2833 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
1974 2834 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
1975 2835 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
1976 2836 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
1977 2837 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
1978 2838 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
1979 2839 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
1980 2840 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
1981 2841 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
1992 2852 8.671028 ACACTAAACTATGTCAAAAACGTTCTT 58.329 29.630 0.00 0.00 0.00 2.52
1993 2853 8.205131 ACACTAAACTATGTCAAAAACGTTCT 57.795 30.769 0.00 0.00 0.00 3.01
1994 2854 8.831000 AACACTAAACTATGTCAAAAACGTTC 57.169 30.769 0.00 0.00 0.00 3.95
2003 2863 9.919348 GAACGTTTTTAACACTAAACTATGTCA 57.081 29.630 0.46 0.00 33.24 3.58
2015 2875 9.702949 CGCAAAATATAAGAACGTTTTTAACAC 57.297 29.630 14.41 0.00 0.00 3.32
2016 2876 9.661187 TCGCAAAATATAAGAACGTTTTTAACA 57.339 25.926 14.41 6.96 0.00 2.41
2017 2877 9.912795 GTCGCAAAATATAAGAACGTTTTTAAC 57.087 29.630 14.41 2.76 0.00 2.01
2018 2878 9.661187 TGTCGCAAAATATAAGAACGTTTTTAA 57.339 25.926 14.41 5.85 0.00 1.52
2019 2879 9.320406 CTGTCGCAAAATATAAGAACGTTTTTA 57.680 29.630 13.02 13.02 0.00 1.52
2020 2880 8.071368 TCTGTCGCAAAATATAAGAACGTTTTT 58.929 29.630 9.22 9.22 0.00 1.94
2021 2881 7.577979 TCTGTCGCAAAATATAAGAACGTTTT 58.422 30.769 0.46 0.00 0.00 2.43
2022 2882 7.124347 TCTGTCGCAAAATATAAGAACGTTT 57.876 32.000 0.46 0.00 0.00 3.60
2023 2883 6.183360 CCTCTGTCGCAAAATATAAGAACGTT 60.183 38.462 0.00 0.00 0.00 3.99
2024 2884 5.291128 CCTCTGTCGCAAAATATAAGAACGT 59.709 40.000 0.00 0.00 0.00 3.99
2025 2885 5.276868 CCCTCTGTCGCAAAATATAAGAACG 60.277 44.000 0.00 0.00 0.00 3.95
2026 2886 5.815740 TCCCTCTGTCGCAAAATATAAGAAC 59.184 40.000 0.00 0.00 0.00 3.01
2027 2887 5.984725 TCCCTCTGTCGCAAAATATAAGAA 58.015 37.500 0.00 0.00 0.00 2.52
2028 2888 5.128827 ACTCCCTCTGTCGCAAAATATAAGA 59.871 40.000 0.00 0.00 0.00 2.10
2029 2889 5.360591 ACTCCCTCTGTCGCAAAATATAAG 58.639 41.667 0.00 0.00 0.00 1.73
2030 2890 5.353394 ACTCCCTCTGTCGCAAAATATAA 57.647 39.130 0.00 0.00 0.00 0.98
2031 2891 5.831525 TCTACTCCCTCTGTCGCAAAATATA 59.168 40.000 0.00 0.00 0.00 0.86
2032 2892 3.914426 ACTCCCTCTGTCGCAAAATAT 57.086 42.857 0.00 0.00 0.00 1.28
2033 2893 4.021229 TCTACTCCCTCTGTCGCAAAATA 58.979 43.478 0.00 0.00 0.00 1.40
2034 2894 2.832129 TCTACTCCCTCTGTCGCAAAAT 59.168 45.455 0.00 0.00 0.00 1.82
2035 2895 2.244695 TCTACTCCCTCTGTCGCAAAA 58.755 47.619 0.00 0.00 0.00 2.44
2036 2896 1.919240 TCTACTCCCTCTGTCGCAAA 58.081 50.000 0.00 0.00 0.00 3.68
2037 2897 1.919240 TTCTACTCCCTCTGTCGCAA 58.081 50.000 0.00 0.00 0.00 4.85
2038 2898 2.145397 ATTCTACTCCCTCTGTCGCA 57.855 50.000 0.00 0.00 0.00 5.10
2039 2899 4.650754 TTTATTCTACTCCCTCTGTCGC 57.349 45.455 0.00 0.00 0.00 5.19
2040 2900 6.263392 TCAGATTTATTCTACTCCCTCTGTCG 59.737 42.308 0.00 0.00 31.77 4.35
2041 2901 7.589958 TCAGATTTATTCTACTCCCTCTGTC 57.410 40.000 0.00 0.00 31.77 3.51
2042 2902 7.979786 TTCAGATTTATTCTACTCCCTCTGT 57.020 36.000 0.00 0.00 31.77 3.41
2043 2903 7.930865 CCTTTCAGATTTATTCTACTCCCTCTG 59.069 40.741 0.00 0.00 31.77 3.35
2044 2904 7.419634 GCCTTTCAGATTTATTCTACTCCCTCT 60.420 40.741 0.00 0.00 31.77 3.69
2045 2905 6.708502 GCCTTTCAGATTTATTCTACTCCCTC 59.291 42.308 0.00 0.00 31.77 4.30
2046 2906 6.388394 AGCCTTTCAGATTTATTCTACTCCCT 59.612 38.462 0.00 0.00 31.77 4.20
2047 2907 6.596621 AGCCTTTCAGATTTATTCTACTCCC 58.403 40.000 0.00 0.00 31.77 4.30
2048 2908 9.267084 CTAAGCCTTTCAGATTTATTCTACTCC 57.733 37.037 0.00 0.00 31.77 3.85
2049 2909 9.825109 ACTAAGCCTTTCAGATTTATTCTACTC 57.175 33.333 0.00 0.00 31.77 2.59
2050 2910 9.606631 CACTAAGCCTTTCAGATTTATTCTACT 57.393 33.333 0.00 0.00 31.77 2.57
2051 2911 8.831550 CCACTAAGCCTTTCAGATTTATTCTAC 58.168 37.037 0.00 0.00 31.77 2.59
2052 2912 7.993183 CCCACTAAGCCTTTCAGATTTATTCTA 59.007 37.037 0.00 0.00 31.77 2.10
2053 2913 6.830838 CCCACTAAGCCTTTCAGATTTATTCT 59.169 38.462 0.00 0.00 33.90 2.40
2054 2914 6.460261 GCCCACTAAGCCTTTCAGATTTATTC 60.460 42.308 0.00 0.00 0.00 1.75
2055 2915 5.360999 GCCCACTAAGCCTTTCAGATTTATT 59.639 40.000 0.00 0.00 0.00 1.40
2056 2916 4.889995 GCCCACTAAGCCTTTCAGATTTAT 59.110 41.667 0.00 0.00 0.00 1.40
2057 2917 4.018415 AGCCCACTAAGCCTTTCAGATTTA 60.018 41.667 0.00 0.00 0.00 1.40
2058 2918 3.092301 GCCCACTAAGCCTTTCAGATTT 58.908 45.455 0.00 0.00 0.00 2.17
2059 2919 2.310052 AGCCCACTAAGCCTTTCAGATT 59.690 45.455 0.00 0.00 0.00 2.40
2060 2920 1.918957 AGCCCACTAAGCCTTTCAGAT 59.081 47.619 0.00 0.00 0.00 2.90
2061 2921 1.279271 GAGCCCACTAAGCCTTTCAGA 59.721 52.381 0.00 0.00 0.00 3.27
2062 2922 1.003580 TGAGCCCACTAAGCCTTTCAG 59.996 52.381 0.00 0.00 0.00 3.02
2063 2923 1.064003 TGAGCCCACTAAGCCTTTCA 58.936 50.000 0.00 0.00 0.00 2.69
2064 2924 2.426842 ATGAGCCCACTAAGCCTTTC 57.573 50.000 0.00 0.00 0.00 2.62
2065 2925 2.041620 TGAATGAGCCCACTAAGCCTTT 59.958 45.455 0.00 0.00 0.00 3.11
2066 2926 1.635487 TGAATGAGCCCACTAAGCCTT 59.365 47.619 0.00 0.00 0.00 4.35
2067 2927 1.289160 TGAATGAGCCCACTAAGCCT 58.711 50.000 0.00 0.00 0.00 4.58
2068 2928 1.952296 CATGAATGAGCCCACTAAGCC 59.048 52.381 0.00 0.00 0.00 4.35
2069 2929 1.336125 GCATGAATGAGCCCACTAAGC 59.664 52.381 0.00 0.00 0.00 3.09
2070 2930 2.646930 TGCATGAATGAGCCCACTAAG 58.353 47.619 0.00 0.00 0.00 2.18
2071 2931 2.804986 TGCATGAATGAGCCCACTAA 57.195 45.000 0.00 0.00 0.00 2.24
2072 2932 2.173143 TCATGCATGAATGAGCCCACTA 59.827 45.455 26.87 0.00 32.75 2.74
2073 2933 1.064240 TCATGCATGAATGAGCCCACT 60.064 47.619 26.87 0.00 32.75 4.00
2074 2934 1.066605 GTCATGCATGAATGAGCCCAC 59.933 52.381 30.24 11.91 37.24 4.61
2075 2935 1.341187 TGTCATGCATGAATGAGCCCA 60.341 47.619 30.24 18.75 37.24 5.36
2076 2936 1.066605 GTGTCATGCATGAATGAGCCC 59.933 52.381 30.24 16.40 37.24 5.19
2077 2937 1.268386 CGTGTCATGCATGAATGAGCC 60.268 52.381 30.24 17.10 37.24 4.70
2078 2938 1.667212 TCGTGTCATGCATGAATGAGC 59.333 47.619 30.24 17.80 39.93 4.26
2084 2944 1.405933 CCCTCTTCGTGTCATGCATGA 60.406 52.381 25.42 25.42 41.04 3.07
2085 2945 1.012086 CCCTCTTCGTGTCATGCATG 58.988 55.000 21.07 21.07 35.47 4.06
2086 2946 0.615331 ACCCTCTTCGTGTCATGCAT 59.385 50.000 0.00 0.00 0.00 3.96
2087 2947 0.320683 CACCCTCTTCGTGTCATGCA 60.321 55.000 0.00 0.00 0.00 3.96
2088 2948 0.037326 TCACCCTCTTCGTGTCATGC 60.037 55.000 0.00 0.00 32.86 4.06
2089 2949 1.273606 ACTCACCCTCTTCGTGTCATG 59.726 52.381 0.00 0.00 32.86 3.07
2090 2950 1.633774 ACTCACCCTCTTCGTGTCAT 58.366 50.000 0.00 0.00 32.86 3.06
2091 2951 1.068588 CAACTCACCCTCTTCGTGTCA 59.931 52.381 0.00 0.00 32.86 3.58
2092 2952 1.340248 TCAACTCACCCTCTTCGTGTC 59.660 52.381 0.00 0.00 32.86 3.67
2093 2953 1.341531 CTCAACTCACCCTCTTCGTGT 59.658 52.381 0.00 0.00 32.86 4.49
2094 2954 1.337260 CCTCAACTCACCCTCTTCGTG 60.337 57.143 0.00 0.00 0.00 4.35
2095 2955 0.969894 CCTCAACTCACCCTCTTCGT 59.030 55.000 0.00 0.00 0.00 3.85
2096 2956 1.203523 CTCCTCAACTCACCCTCTTCG 59.796 57.143 0.00 0.00 0.00 3.79
2097 2957 2.495669 CTCTCCTCAACTCACCCTCTTC 59.504 54.545 0.00 0.00 0.00 2.87
2098 2958 2.534990 CTCTCCTCAACTCACCCTCTT 58.465 52.381 0.00 0.00 0.00 2.85
2099 2959 1.894978 GCTCTCCTCAACTCACCCTCT 60.895 57.143 0.00 0.00 0.00 3.69
2100 2960 0.534873 GCTCTCCTCAACTCACCCTC 59.465 60.000 0.00 0.00 0.00 4.30
2101 2961 0.116143 AGCTCTCCTCAACTCACCCT 59.884 55.000 0.00 0.00 0.00 4.34
2102 2962 0.534873 GAGCTCTCCTCAACTCACCC 59.465 60.000 6.43 0.00 40.45 4.61
2103 2963 0.534873 GGAGCTCTCCTCAACTCACC 59.465 60.000 14.64 0.00 46.16 4.02
2120 2980 4.225864 GCGTTATGCGTCCTATGGAGGA 62.226 54.545 10.07 0.00 44.82 3.71
2121 2981 1.935300 GCGTTATGCGTCCTATGGAGG 60.935 57.143 2.31 2.31 43.66 4.30
2122 2982 1.419374 GCGTTATGCGTCCTATGGAG 58.581 55.000 0.00 0.00 43.66 3.86
2123 2983 3.580904 GCGTTATGCGTCCTATGGA 57.419 52.632 0.00 0.00 43.66 3.41
2133 2993 1.396996 CACTTACCCAGTGCGTTATGC 59.603 52.381 0.00 0.00 46.70 3.14
2142 3002 1.072266 TGATTGCCCACTTACCCAGT 58.928 50.000 0.00 0.00 35.35 4.00
2143 3003 1.271871 TGTGATTGCCCACTTACCCAG 60.272 52.381 0.00 0.00 37.89 4.45
2144 3004 0.774276 TGTGATTGCCCACTTACCCA 59.226 50.000 0.00 0.00 37.89 4.51
2145 3005 1.173913 GTGTGATTGCCCACTTACCC 58.826 55.000 0.00 0.00 37.89 3.69
2146 3006 1.539827 GTGTGTGATTGCCCACTTACC 59.460 52.381 0.00 0.00 37.89 2.85
2147 3007 1.539827 GGTGTGTGATTGCCCACTTAC 59.460 52.381 0.00 0.00 37.89 2.34
2148 3008 1.546773 GGGTGTGTGATTGCCCACTTA 60.547 52.381 0.00 0.00 40.76 2.24
2149 3009 0.827507 GGGTGTGTGATTGCCCACTT 60.828 55.000 0.00 0.00 40.76 3.16
2150 3010 1.228552 GGGTGTGTGATTGCCCACT 60.229 57.895 0.00 0.00 40.76 4.00
2151 3011 2.275380 GGGGTGTGTGATTGCCCAC 61.275 63.158 0.00 0.00 42.79 4.61
2152 3012 2.117206 GGGGTGTGTGATTGCCCA 59.883 61.111 0.00 0.00 42.79 5.36
2153 3013 2.679996 GGGGGTGTGTGATTGCCC 60.680 66.667 0.00 0.00 40.35 5.36
2154 3014 1.678970 GAGGGGGTGTGTGATTGCC 60.679 63.158 0.00 0.00 0.00 4.52
2155 3015 1.678970 GGAGGGGGTGTGTGATTGC 60.679 63.158 0.00 0.00 0.00 3.56
2156 3016 1.000896 GGGAGGGGGTGTGTGATTG 60.001 63.158 0.00 0.00 0.00 2.67
2157 3017 1.151587 AGGGAGGGGGTGTGTGATT 60.152 57.895 0.00 0.00 0.00 2.57
2158 3018 1.925455 CAGGGAGGGGGTGTGTGAT 60.925 63.158 0.00 0.00 0.00 3.06
2159 3019 2.529136 CAGGGAGGGGGTGTGTGA 60.529 66.667 0.00 0.00 0.00 3.58
2160 3020 4.351054 GCAGGGAGGGGGTGTGTG 62.351 72.222 0.00 0.00 0.00 3.82
2161 3021 4.918360 TGCAGGGAGGGGGTGTGT 62.918 66.667 0.00 0.00 0.00 3.72
2162 3022 3.341629 ATGCAGGGAGGGGGTGTG 61.342 66.667 0.00 0.00 0.00 3.82
2163 3023 3.341629 CATGCAGGGAGGGGGTGT 61.342 66.667 0.00 0.00 0.00 4.16
2164 3024 1.941403 ATTCATGCAGGGAGGGGGTG 61.941 60.000 0.00 0.00 0.00 4.61
2165 3025 1.623686 ATTCATGCAGGGAGGGGGT 60.624 57.895 0.00 0.00 0.00 4.95
2166 3026 1.152610 CATTCATGCAGGGAGGGGG 60.153 63.158 0.00 0.00 0.00 5.40
2167 3027 4.593033 CATTCATGCAGGGAGGGG 57.407 61.111 0.00 0.00 0.00 4.79
2177 3037 1.603678 GCCGGCCATTTAGCATTCATG 60.604 52.381 18.11 0.00 0.00 3.07
2178 3038 0.675633 GCCGGCCATTTAGCATTCAT 59.324 50.000 18.11 0.00 0.00 2.57
2179 3039 1.391157 GGCCGGCCATTTAGCATTCA 61.391 55.000 40.73 0.00 35.81 2.57
2180 3040 1.363807 GGCCGGCCATTTAGCATTC 59.636 57.895 40.73 8.02 35.81 2.67
2181 3041 2.133641 GGGCCGGCCATTTAGCATT 61.134 57.895 44.46 0.00 37.98 3.56
2182 3042 2.521708 GGGCCGGCCATTTAGCAT 60.522 61.111 44.46 0.00 37.98 3.79
2183 3043 4.053871 TGGGCCGGCCATTTAGCA 62.054 61.111 44.46 29.64 37.98 3.49
2184 3044 3.219198 CTGGGCCGGCCATTTAGC 61.219 66.667 44.46 27.32 37.98 3.09
2185 3045 2.120909 CACTGGGCCGGCCATTTAG 61.121 63.158 44.46 34.22 37.98 1.85
2186 3046 2.044451 CACTGGGCCGGCCATTTA 60.044 61.111 44.46 26.29 37.98 1.40
2187 3047 4.299796 ACACTGGGCCGGCCATTT 62.300 61.111 44.46 25.92 37.98 2.32
2197 3057 2.495366 TACCGTTAGCGCACACTGGG 62.495 60.000 11.47 5.36 36.67 4.45
2198 3058 0.459585 ATACCGTTAGCGCACACTGG 60.460 55.000 11.47 13.23 36.67 4.00
2199 3059 0.645355 CATACCGTTAGCGCACACTG 59.355 55.000 11.47 4.38 36.67 3.66
2200 3060 0.528924 TCATACCGTTAGCGCACACT 59.471 50.000 11.47 0.00 36.67 3.55
2201 3061 0.921347 CTCATACCGTTAGCGCACAC 59.079 55.000 11.47 4.24 36.67 3.82
2202 3062 0.812549 TCTCATACCGTTAGCGCACA 59.187 50.000 11.47 0.00 36.67 4.57
2203 3063 1.065102 TCTCTCATACCGTTAGCGCAC 59.935 52.381 11.47 0.00 36.67 5.34
2204 3064 1.385528 TCTCTCATACCGTTAGCGCA 58.614 50.000 11.47 0.00 36.67 6.09
2205 3065 2.708386 ATCTCTCATACCGTTAGCGC 57.292 50.000 0.00 0.00 36.67 5.92
2206 3066 4.607955 TGAAATCTCTCATACCGTTAGCG 58.392 43.478 0.00 0.00 37.95 4.26
2207 3067 6.903883 TTTGAAATCTCTCATACCGTTAGC 57.096 37.500 0.00 0.00 0.00 3.09
2305 3165 8.334263 ACATTTTTGAACTTGTGGACATTTTT 57.666 26.923 0.00 0.00 0.00 1.94
2306 3166 7.920160 ACATTTTTGAACTTGTGGACATTTT 57.080 28.000 0.00 0.00 0.00 1.82
2307 3167 7.920160 AACATTTTTGAACTTGTGGACATTT 57.080 28.000 0.00 0.00 0.00 2.32
2308 3168 7.390162 ACAAACATTTTTGAACTTGTGGACATT 59.610 29.630 11.21 0.00 44.38 2.71
2309 3169 6.878389 ACAAACATTTTTGAACTTGTGGACAT 59.122 30.769 11.21 0.00 44.38 3.06
2310 3170 6.146837 CACAAACATTTTTGAACTTGTGGACA 59.853 34.615 11.21 0.00 44.38 4.02
2311 3171 6.367422 TCACAAACATTTTTGAACTTGTGGAC 59.633 34.615 11.21 0.00 44.38 4.02
2312 3172 6.459066 TCACAAACATTTTTGAACTTGTGGA 58.541 32.000 11.21 0.00 44.38 4.02
2313 3173 6.718454 TCACAAACATTTTTGAACTTGTGG 57.282 33.333 11.21 0.00 44.38 4.17
2314 3174 9.264782 GAATTCACAAACATTTTTGAACTTGTG 57.735 29.630 11.21 6.44 44.38 3.33
2315 3175 8.997323 TGAATTCACAAACATTTTTGAACTTGT 58.003 25.926 11.21 0.00 44.38 3.16
2316 3176 9.480538 CTGAATTCACAAACATTTTTGAACTTG 57.519 29.630 11.21 0.00 44.38 3.16
2317 3177 9.434420 TCTGAATTCACAAACATTTTTGAACTT 57.566 25.926 11.21 5.04 44.38 2.66
2318 3178 9.090692 CTCTGAATTCACAAACATTTTTGAACT 57.909 29.630 11.21 0.00 44.38 3.01
2319 3179 9.086336 TCTCTGAATTCACAAACATTTTTGAAC 57.914 29.630 11.21 0.00 44.38 3.18
2320 3180 9.650539 TTCTCTGAATTCACAAACATTTTTGAA 57.349 25.926 11.21 8.05 44.38 2.69
2321 3181 9.820725 ATTCTCTGAATTCACAAACATTTTTGA 57.179 25.926 11.21 0.00 44.38 2.69
2322 3182 9.858247 CATTCTCTGAATTCACAAACATTTTTG 57.142 29.630 3.38 2.77 46.61 2.44
2323 3183 9.603921 ACATTCTCTGAATTCACAAACATTTTT 57.396 25.926 3.38 0.00 0.00 1.94
2324 3184 9.603921 AACATTCTCTGAATTCACAAACATTTT 57.396 25.926 3.38 0.00 0.00 1.82
2325 3185 9.252962 GAACATTCTCTGAATTCACAAACATTT 57.747 29.630 3.38 0.00 0.00 2.32
2326 3186 8.415553 TGAACATTCTCTGAATTCACAAACATT 58.584 29.630 3.38 0.00 0.00 2.71
2327 3187 7.864379 GTGAACATTCTCTGAATTCACAAACAT 59.136 33.333 3.38 0.00 45.43 2.71
2328 3188 7.195646 GTGAACATTCTCTGAATTCACAAACA 58.804 34.615 3.38 0.00 45.43 2.83
2329 3189 7.614674 GTGAACATTCTCTGAATTCACAAAC 57.385 36.000 3.38 0.00 45.43 2.93
2333 3193 8.077991 TGAATTGTGAACATTCTCTGAATTCAC 58.922 33.333 3.38 14.69 46.02 3.18
2334 3194 8.168790 TGAATTGTGAACATTCTCTGAATTCA 57.831 30.769 8.12 8.12 34.43 2.57
2335 3195 9.467258 TTTGAATTGTGAACATTCTCTGAATTC 57.533 29.630 0.00 0.00 31.18 2.17
2336 3196 9.820725 TTTTGAATTGTGAACATTCTCTGAATT 57.179 25.926 0.00 0.00 0.00 2.17
2337 3197 9.820725 TTTTTGAATTGTGAACATTCTCTGAAT 57.179 25.926 0.00 0.00 0.00 2.57
2338 3198 9.086336 GTTTTTGAATTGTGAACATTCTCTGAA 57.914 29.630 0.00 0.00 0.00 3.02
2339 3199 8.469200 AGTTTTTGAATTGTGAACATTCTCTGA 58.531 29.630 0.00 0.00 0.00 3.27
2340 3200 8.638685 AGTTTTTGAATTGTGAACATTCTCTG 57.361 30.769 0.00 0.00 0.00 3.35
2346 3206 8.967218 CGTGAATAGTTTTTGAATTGTGAACAT 58.033 29.630 0.00 0.00 0.00 2.71
2347 3207 8.184848 TCGTGAATAGTTTTTGAATTGTGAACA 58.815 29.630 0.00 0.00 0.00 3.18
2348 3208 8.555166 TCGTGAATAGTTTTTGAATTGTGAAC 57.445 30.769 0.00 0.00 0.00 3.18
2349 3209 9.743057 ATTCGTGAATAGTTTTTGAATTGTGAA 57.257 25.926 0.00 0.00 0.00 3.18
2350 3210 9.743057 AATTCGTGAATAGTTTTTGAATTGTGA 57.257 25.926 0.00 0.00 34.37 3.58
2380 3240 9.497030 GCGAACCTTTTTATTTGAAAACATTTT 57.503 25.926 0.00 0.00 0.00 1.82
2381 3241 8.669243 TGCGAACCTTTTTATTTGAAAACATTT 58.331 25.926 0.00 0.00 0.00 2.32
2382 3242 8.202745 TGCGAACCTTTTTATTTGAAAACATT 57.797 26.923 0.00 0.00 0.00 2.71
2383 3243 7.778470 TGCGAACCTTTTTATTTGAAAACAT 57.222 28.000 0.00 0.00 0.00 2.71
2384 3244 7.596749 TTGCGAACCTTTTTATTTGAAAACA 57.403 28.000 0.00 0.00 0.00 2.83
2385 3245 8.172484 AGTTTGCGAACCTTTTTATTTGAAAAC 58.828 29.630 13.41 0.00 36.39 2.43
2386 3246 8.257830 AGTTTGCGAACCTTTTTATTTGAAAA 57.742 26.923 13.41 0.00 36.39 2.29
2387 3247 7.545965 TGAGTTTGCGAACCTTTTTATTTGAAA 59.454 29.630 13.41 0.00 36.39 2.69
2388 3248 7.036220 TGAGTTTGCGAACCTTTTTATTTGAA 58.964 30.769 13.41 0.00 36.39 2.69
2389 3249 6.565234 TGAGTTTGCGAACCTTTTTATTTGA 58.435 32.000 13.41 0.00 36.39 2.69
2390 3250 6.820470 TGAGTTTGCGAACCTTTTTATTTG 57.180 33.333 13.41 0.00 36.39 2.32
2391 3251 7.835634 TTTGAGTTTGCGAACCTTTTTATTT 57.164 28.000 13.41 0.00 36.39 1.40
2392 3252 7.835634 TTTTGAGTTTGCGAACCTTTTTATT 57.164 28.000 13.41 0.00 36.39 1.40
2393 3253 7.547722 ACTTTTTGAGTTTGCGAACCTTTTTAT 59.452 29.630 13.41 0.00 33.92 1.40
2394 3254 6.869388 ACTTTTTGAGTTTGCGAACCTTTTTA 59.131 30.769 13.41 0.00 33.92 1.52
2395 3255 5.699001 ACTTTTTGAGTTTGCGAACCTTTTT 59.301 32.000 13.41 0.00 33.92 1.94
2396 3256 5.120053 CACTTTTTGAGTTTGCGAACCTTTT 59.880 36.000 13.41 0.00 36.10 2.27
2397 3257 4.625311 CACTTTTTGAGTTTGCGAACCTTT 59.375 37.500 13.41 0.00 36.10 3.11
2398 3258 4.173256 CACTTTTTGAGTTTGCGAACCTT 58.827 39.130 13.41 0.00 36.10 3.50
2399 3259 3.192633 ACACTTTTTGAGTTTGCGAACCT 59.807 39.130 13.41 0.96 36.10 3.50
2400 3260 3.507786 ACACTTTTTGAGTTTGCGAACC 58.492 40.909 13.41 5.85 36.10 3.62
2401 3261 5.305036 CAAACACTTTTTGAGTTTGCGAAC 58.695 37.500 8.93 8.93 45.14 3.95
2402 3262 5.508124 CAAACACTTTTTGAGTTTGCGAA 57.492 34.783 0.00 0.00 45.14 4.70
2414 3274 8.433893 GCATTTTCAAAAATTGCAAACACTTTT 58.566 25.926 1.71 2.68 39.52 2.27
2415 3275 7.813627 AGCATTTTCAAAAATTGCAAACACTTT 59.186 25.926 1.71 0.00 36.52 2.66
2416 3276 7.314393 AGCATTTTCAAAAATTGCAAACACTT 58.686 26.923 1.71 0.00 36.52 3.16
2417 3277 6.854778 AGCATTTTCAAAAATTGCAAACACT 58.145 28.000 1.71 0.11 36.52 3.55
2418 3278 6.746364 TGAGCATTTTCAAAAATTGCAAACAC 59.254 30.769 1.71 7.31 36.52 3.32
2419 3279 6.746364 GTGAGCATTTTCAAAAATTGCAAACA 59.254 30.769 1.71 12.18 36.52 2.83
2420 3280 6.746364 TGTGAGCATTTTCAAAAATTGCAAAC 59.254 30.769 1.71 14.44 36.52 2.93
2421 3281 6.849502 TGTGAGCATTTTCAAAAATTGCAAA 58.150 28.000 1.71 1.13 36.52 3.68
2422 3282 6.432607 TGTGAGCATTTTCAAAAATTGCAA 57.567 29.167 16.84 0.00 36.52 4.08
2423 3283 6.432607 TTGTGAGCATTTTCAAAAATTGCA 57.567 29.167 16.84 0.00 36.52 4.08
2424 3284 6.968335 ACTTTGTGAGCATTTTCAAAAATTGC 59.032 30.769 9.95 9.95 34.63 3.56
2425 3285 9.985318 TTACTTTGTGAGCATTTTCAAAAATTG 57.015 25.926 0.00 0.00 34.63 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.