Multiple sequence alignment - TraesCS3D01G317400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G317400 chr3D 100.000 4595 0 0 1 4595 430343297 430347891 0.000000e+00 8486.0
1 TraesCS3D01G317400 chr3D 83.333 114 16 3 34 144 287341352 287341239 8.130000e-18 102.0
2 TraesCS3D01G317400 chr3A 89.256 2178 126 38 747 2863 568380546 568382676 0.000000e+00 2627.0
3 TraesCS3D01G317400 chr3A 95.400 1000 34 4 2860 3848 568382718 568383716 0.000000e+00 1581.0
4 TraesCS3D01G317400 chr3A 80.944 593 83 21 1 565 568379486 568380076 4.220000e-120 442.0
5 TraesCS3D01G317400 chr3A 83.333 462 37 21 3837 4290 568383738 568384167 1.550000e-104 390.0
6 TraesCS3D01G317400 chr3B 92.953 1121 59 13 2878 3985 562730384 562731497 0.000000e+00 1615.0
7 TraesCS3D01G317400 chr3B 91.246 891 49 10 802 1669 562727852 562728736 0.000000e+00 1186.0
8 TraesCS3D01G317400 chr3B 82.173 1049 113 33 1831 2849 562729304 562730308 0.000000e+00 833.0
9 TraesCS3D01G317400 chr3B 84.543 854 82 32 1 824 562727004 562727837 0.000000e+00 800.0
10 TraesCS3D01G317400 chr3B 95.745 47 2 0 2535 2581 562730041 562729995 4.930000e-10 76.8
11 TraesCS3D01G317400 chr5A 85.124 242 34 2 4355 4595 475981658 475981418 3.550000e-61 246.0
12 TraesCS3D01G317400 chr5A 85.294 238 34 1 4355 4591 573629488 573629725 1.280000e-60 244.0
13 TraesCS3D01G317400 chr1B 85.714 217 31 0 3372 3588 559101204 559100988 3.580000e-56 230.0
14 TraesCS3D01G317400 chr1A 85.714 217 31 0 3372 3588 511099980 511099764 3.580000e-56 230.0
15 TraesCS3D01G317400 chr2B 82.231 242 40 3 4356 4594 554742986 554742745 6.030000e-49 206.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G317400 chr3D 430343297 430347891 4594 False 8486.0 8486 100.00000 1 4595 1 chr3D.!!$F1 4594
1 TraesCS3D01G317400 chr3A 568379486 568384167 4681 False 1260.0 2627 87.23325 1 4290 4 chr3A.!!$F1 4289
2 TraesCS3D01G317400 chr3B 562727004 562731497 4493 False 1108.5 1615 87.72875 1 3985 4 chr3B.!!$F1 3984

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
638 701 0.108774 TATGGCAAACGACCCACACA 59.891 50.0 0.00 0.00 33.17 3.72 F
698 761 0.109964 TCTGTGCGCGCCAAAATTAC 60.110 50.0 30.77 18.55 0.00 1.89 F
700 763 0.386605 TGTGCGCGCCAAAATTACTG 60.387 50.0 30.77 0.00 0.00 2.74 F
759 1106 0.942252 GGCGAAAAACTGACGTTCCT 59.058 50.0 0.00 0.00 31.66 3.36 F
1152 1575 0.953471 TGTAAGCATCCGCACCACAC 60.953 55.0 0.00 0.00 42.27 3.82 F
1674 2099 0.980423 TTGGCCCCCAAATTTAGTGC 59.020 50.0 0.00 0.00 40.92 4.40 F
2778 3697 0.318784 AGAAAGGTGCGACGTCAGTC 60.319 55.0 17.16 4.45 43.72 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1648 2073 0.413037 ATTTGGGGGCCAATCAGTCA 59.587 50.000 4.39 0.00 43.55 3.41 R
2354 3272 1.241165 TGCATCCAAAGCACTGACTG 58.759 50.000 0.00 0.00 37.02 3.51 R
2434 3353 1.827969 ACTCGGAAGCAAGCTCTACAT 59.172 47.619 0.00 0.00 0.00 2.29 R
2576 3495 1.999735 AGTCCGCACATATCGTTGTTG 59.000 47.619 0.00 0.00 0.00 3.33 R
2643 3562 2.916716 CAGGAATGCATAACGTTGTTGC 59.083 45.455 23.41 23.41 36.91 4.17 R
3405 4380 0.470456 AGGTGTACCCGACAGGAACA 60.470 55.000 0.00 0.00 39.29 3.18 R
4560 5585 0.030908 CTCGCTAAGGACCACGATCC 59.969 60.000 0.00 0.00 39.28 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 102 5.299148 TCACCAGATTCATTTTGCCAAAAG 58.701 37.500 8.75 1.57 33.22 2.27
110 112 9.902196 ATTCATTTTGCCAAAAGAATCAATTTC 57.098 25.926 8.75 0.00 33.22 2.17
195 212 4.201951 CCAAAGATGGGACGGACG 57.798 61.111 0.00 0.00 43.51 4.79
196 213 1.449601 CCAAAGATGGGACGGACGG 60.450 63.158 0.00 0.00 43.51 4.79
317 334 2.314647 ATGCGTCGGTGTCAAACGG 61.315 57.895 0.00 0.00 36.92 4.44
336 353 1.065928 CGTCGCCTCTACCATGGAC 59.934 63.158 21.47 1.85 0.00 4.02
386 404 0.329596 GGATCAACCCCTGAAGCACT 59.670 55.000 0.00 0.00 37.67 4.40
421 453 1.076332 GTTGATCGGAACCAAGACGG 58.924 55.000 0.00 0.00 42.50 4.79
439 488 4.834453 CGCAGCTGCTCCTCCTGG 62.834 72.222 34.22 14.00 39.32 4.45
456 505 0.980754 TGGCACCCATCTCACGGTAT 60.981 55.000 0.00 0.00 0.00 2.73
459 508 1.070758 GCACCCATCTCACGGTATGAT 59.929 52.381 0.00 0.00 36.48 2.45
466 515 0.179111 CTCACGGTATGATGGTGCGT 60.179 55.000 0.00 0.00 36.48 5.24
523 573 1.566703 CACCTCCTCCACTCCTCTCTA 59.433 57.143 0.00 0.00 0.00 2.43
541 591 2.620585 TCTACATCATCTCTGTCGCCTG 59.379 50.000 0.00 0.00 0.00 4.85
602 665 1.342819 GGGGAATGAGAGATGGAGACG 59.657 57.143 0.00 0.00 0.00 4.18
609 672 1.586564 GAGATGGAGACGTTCGCCG 60.587 63.158 0.00 0.00 39.36 6.46
620 683 2.280660 TTCGCCGCGGGTTGTTTA 60.281 55.556 29.38 0.00 0.00 2.01
621 684 1.671704 TTCGCCGCGGGTTGTTTAT 60.672 52.632 29.38 0.00 0.00 1.40
622 685 1.913451 TTCGCCGCGGGTTGTTTATG 61.913 55.000 29.38 0.00 0.00 1.90
624 687 2.487892 CCGCGGGTTGTTTATGGC 59.512 61.111 20.10 0.00 0.00 4.40
625 688 2.336478 CCGCGGGTTGTTTATGGCA 61.336 57.895 20.10 0.00 0.00 4.92
628 691 1.424403 GCGGGTTGTTTATGGCAAAC 58.576 50.000 0.00 0.00 33.12 2.93
629 692 1.692296 CGGGTTGTTTATGGCAAACG 58.308 50.000 0.00 0.00 34.59 3.60
630 693 1.267261 CGGGTTGTTTATGGCAAACGA 59.733 47.619 0.00 0.00 34.59 3.85
631 694 2.668250 GGGTTGTTTATGGCAAACGAC 58.332 47.619 12.18 12.18 41.53 4.34
633 696 2.668250 GTTGTTTATGGCAAACGACCC 58.332 47.619 10.18 0.00 38.16 4.46
634 697 1.982660 TGTTTATGGCAAACGACCCA 58.017 45.000 0.00 0.00 35.21 4.51
636 699 1.609555 GTTTATGGCAAACGACCCACA 59.390 47.619 0.00 0.00 33.17 4.17
638 701 0.108774 TATGGCAAACGACCCACACA 59.891 50.000 0.00 0.00 33.17 3.72
640 703 2.115911 GGCAAACGACCCACACACA 61.116 57.895 0.00 0.00 0.00 3.72
642 705 1.649390 GCAAACGACCCACACACACA 61.649 55.000 0.00 0.00 0.00 3.72
644 707 1.021202 AAACGACCCACACACACATG 58.979 50.000 0.00 0.00 0.00 3.21
646 709 2.945984 GACCCACACACACATGCG 59.054 61.111 0.00 0.00 0.00 4.73
648 711 4.388080 CCCACACACACATGCGCG 62.388 66.667 0.00 0.00 0.00 6.86
652 715 3.772560 CACACACATGCGCGCGTA 61.773 61.111 32.35 29.07 0.00 4.42
653 716 3.773630 ACACACATGCGCGCGTAC 61.774 61.111 32.35 16.47 0.00 3.67
654 717 3.772560 CACACATGCGCGCGTACA 61.773 61.111 32.35 22.07 0.00 2.90
655 718 3.773630 ACACATGCGCGCGTACAC 61.774 61.111 32.35 15.24 0.00 2.90
656 719 3.772560 CACATGCGCGCGTACACA 61.773 61.111 32.35 20.88 0.00 3.72
657 720 3.773630 ACATGCGCGCGTACACAC 61.774 61.111 32.35 14.02 0.00 3.82
658 721 3.772560 CATGCGCGCGTACACACA 61.773 61.111 32.35 19.68 0.00 3.72
659 722 3.773630 ATGCGCGCGTACACACAC 61.774 61.111 32.35 12.41 0.00 3.82
661 724 4.696172 GCGCGCGTACACACACAC 62.696 66.667 32.35 6.30 0.00 3.82
662 725 3.323903 CGCGCGTACACACACACA 61.324 61.111 24.19 0.00 0.00 3.72
663 726 2.244382 GCGCGTACACACACACAC 59.756 61.111 8.43 0.00 0.00 3.82
664 727 2.518312 GCGCGTACACACACACACA 61.518 57.895 8.43 0.00 0.00 3.72
682 745 3.372822 ACACAAACTTACGTGGTTGTCTG 59.627 43.478 6.35 5.83 37.45 3.51
685 748 1.578583 ACTTACGTGGTTGTCTGTGC 58.421 50.000 0.00 0.00 0.00 4.57
693 756 3.205536 TTGTCTGTGCGCGCCAAA 61.206 55.556 30.77 13.17 0.00 3.28
698 761 0.109964 TCTGTGCGCGCCAAAATTAC 60.110 50.000 30.77 18.55 0.00 1.89
700 763 0.386605 TGTGCGCGCCAAAATTACTG 60.387 50.000 30.77 0.00 0.00 2.74
703 766 1.125847 GCGCGCCAAAATTACTGTCG 61.126 55.000 23.24 0.00 0.00 4.35
706 1053 1.976045 GCGCCAAAATTACTGTCGTTG 59.024 47.619 0.00 0.00 0.00 4.10
714 1061 7.675403 GCCAAAATTACTGTCGTTGAATCGATA 60.675 37.037 0.00 0.00 41.78 2.92
759 1106 0.942252 GGCGAAAAACTGACGTTCCT 59.058 50.000 0.00 0.00 31.66 3.36
762 1109 2.223377 GCGAAAAACTGACGTTCCTCAT 59.777 45.455 0.00 0.00 31.66 2.90
971 1394 1.336440 CCAAACATCGCTGGTCAAACA 59.664 47.619 0.00 0.00 0.00 2.83
1000 1423 1.488812 ACCGCACTGCCTATAAATCCA 59.511 47.619 0.00 0.00 0.00 3.41
1001 1424 2.106511 ACCGCACTGCCTATAAATCCAT 59.893 45.455 0.00 0.00 0.00 3.41
1152 1575 0.953471 TGTAAGCATCCGCACCACAC 60.953 55.000 0.00 0.00 42.27 3.82
1177 1600 4.883021 TCTTCTACCTAGGTCCACATCT 57.117 45.455 20.32 0.00 0.00 2.90
1301 1724 7.648039 AAACCCATCCTAATTTACGCATTTA 57.352 32.000 0.00 0.00 0.00 1.40
1318 1741 6.926272 ACGCATTTAGAGTAATTCCTGAGATC 59.074 38.462 0.00 0.00 0.00 2.75
1330 1753 9.255304 GTAATTCCTGAGATCAAGTATCACTTC 57.745 37.037 0.00 0.00 36.03 3.01
1648 2073 6.682861 GCGATTCTGCCCCAATTTTATAGTTT 60.683 38.462 0.00 0.00 0.00 2.66
1649 2074 6.697019 CGATTCTGCCCCAATTTTATAGTTTG 59.303 38.462 0.00 0.00 0.00 2.93
1674 2099 0.980423 TTGGCCCCCAAATTTAGTGC 59.020 50.000 0.00 0.00 40.92 4.40
1736 2618 4.459337 AGCTAAAGGCCAACTGATAAACAC 59.541 41.667 5.01 0.00 43.05 3.32
1784 2674 6.500684 TCTGATATTTGTGAGTTCTTTGGC 57.499 37.500 0.00 0.00 0.00 4.52
1785 2675 6.240894 TCTGATATTTGTGAGTTCTTTGGCT 58.759 36.000 0.00 0.00 0.00 4.75
1786 2676 6.372659 TCTGATATTTGTGAGTTCTTTGGCTC 59.627 38.462 0.00 0.00 0.00 4.70
1790 2680 2.050144 TGTGAGTTCTTTGGCTCCTCT 58.950 47.619 0.00 0.00 0.00 3.69
1808 2698 6.127786 GCTCCTCTAAATTCATTGCTTCAGTT 60.128 38.462 0.00 0.00 0.00 3.16
1903 2794 2.968574 TCCTCTGCCCTCTGATGAATAC 59.031 50.000 0.00 0.00 0.00 1.89
1998 2900 2.708216 TTTCAGCAGACAACTGACCA 57.292 45.000 0.00 0.00 43.64 4.02
2032 2934 8.552296 ACTATCTGATGGAAGTTTTTCTATGGT 58.448 33.333 8.09 0.00 34.99 3.55
2061 2963 8.893727 GCCTAATGCAAGTTTAGATCTTAGAAA 58.106 33.333 0.00 0.00 40.77 2.52
2103 3007 4.562082 TGACATGGACTTAACTACCAACG 58.438 43.478 0.00 0.00 37.24 4.10
2106 3010 6.153170 TGACATGGACTTAACTACCAACGATA 59.847 38.462 0.00 0.00 37.24 2.92
2211 3127 7.873739 AAATTTTTAATCACTTCCTTGAGCG 57.126 32.000 0.00 0.00 0.00 5.03
2213 3129 6.385649 TTTTTAATCACTTCCTTGAGCGTT 57.614 33.333 0.00 0.00 0.00 4.84
2215 3131 5.607119 TTAATCACTTCCTTGAGCGTTTC 57.393 39.130 0.00 0.00 0.00 2.78
2261 3178 3.081061 TGGTTCCACTACATGCATGTTC 58.919 45.455 35.45 16.71 41.97 3.18
2293 3210 8.400947 TGTTCTCTTGAATGAAAGAAAAGTGAG 58.599 33.333 0.00 0.00 35.79 3.51
2335 3253 3.319137 TTCCTTCCTCATCGTCAGTTG 57.681 47.619 0.00 0.00 0.00 3.16
2354 3272 7.850492 GTCAGTTGTGGCAAATAACAAAATTTC 59.150 33.333 11.49 0.00 37.99 2.17
2356 3274 7.851963 CAGTTGTGGCAAATAACAAAATTTCAG 59.148 33.333 11.49 0.00 37.99 3.02
2359 3277 7.044181 TGTGGCAAATAACAAAATTTCAGTCA 58.956 30.769 0.00 0.00 0.00 3.41
2420 3339 8.277490 AGATTTAAATCTTTCCGTTACTTCCC 57.723 34.615 22.43 0.00 42.96 3.97
2434 3353 5.182380 CGTTACTTCCCAATTAAGGCAAAGA 59.818 40.000 0.00 0.00 0.00 2.52
2451 3370 2.593346 AGATGTAGAGCTTGCTTCCG 57.407 50.000 0.00 0.00 0.00 4.30
2467 3386 6.417191 TGCTTCCGAGTAATTGAATTGTAC 57.583 37.500 0.00 0.00 0.00 2.90
2541 3460 8.276325 GTCATATAGTCCTTGAAATTGTTAGCG 58.724 37.037 0.00 0.00 0.00 4.26
2629 3548 9.912634 TTCTCAAAGGAAGCACAAATAAATAAG 57.087 29.630 0.00 0.00 0.00 1.73
2630 3549 9.077885 TCTCAAAGGAAGCACAAATAAATAAGT 57.922 29.630 0.00 0.00 0.00 2.24
2664 3583 2.916716 GCAACAACGTTATGCATTCCTG 59.083 45.455 25.04 4.49 39.81 3.86
2768 3687 4.880696 AGCTGATGAGATAAAGAAAGGTGC 59.119 41.667 0.00 0.00 0.00 5.01
2770 3689 5.084818 TGATGAGATAAAGAAAGGTGCGA 57.915 39.130 0.00 0.00 0.00 5.10
2778 3697 0.318784 AGAAAGGTGCGACGTCAGTC 60.319 55.000 17.16 4.45 43.72 3.51
2813 3732 3.699038 GCTAAAATATGGCAGGTTGGTCA 59.301 43.478 0.00 0.00 0.00 4.02
2814 3733 4.342092 GCTAAAATATGGCAGGTTGGTCAT 59.658 41.667 0.00 0.00 36.90 3.06
2833 3752 5.015733 GTCATTGTCATCTCGCGTTTTAAG 58.984 41.667 5.77 0.00 0.00 1.85
2885 3855 7.092846 ACCAGTCTGGCTATGTTAAGAATAGTT 60.093 37.037 19.40 0.00 42.67 2.24
2950 3925 8.717821 GTGCAGTTTTTACATACATCACTCTTA 58.282 33.333 0.00 0.00 0.00 2.10
2951 3926 9.448438 TGCAGTTTTTACATACATCACTCTTAT 57.552 29.630 0.00 0.00 0.00 1.73
3102 4077 1.759881 GGAGGCAGATGGGATCCTG 59.240 63.158 12.58 2.72 0.00 3.86
3165 4140 1.609208 AGGCATTCTTTGACGCAACT 58.391 45.000 0.00 0.00 38.94 3.16
3266 4241 2.748532 AGGAGACTACAGCGTAAGTGTC 59.251 50.000 4.61 4.61 40.61 3.67
3317 4292 7.778853 AGAGAAGCCTCATAATGAAACATCATT 59.221 33.333 8.87 8.87 41.87 2.57
3411 4386 0.467290 ACGGCATGGTGTTTGTTCCT 60.467 50.000 0.00 0.00 0.00 3.36
3456 4431 2.349817 GCTGTTCGACATGGACAAAGTG 60.350 50.000 0.00 0.00 0.00 3.16
3567 4542 0.804989 GCCAGTACTTTGCGAGCATT 59.195 50.000 0.00 0.00 0.00 3.56
3600 4575 1.963985 AGGGATCTGCTTGACCTCTT 58.036 50.000 0.00 0.00 0.00 2.85
3682 4658 6.339587 TGTTCTCTTCTTTTGTGGTGTTTT 57.660 33.333 0.00 0.00 0.00 2.43
3684 4660 7.535139 TGTTCTCTTCTTTTGTGGTGTTTTAG 58.465 34.615 0.00 0.00 0.00 1.85
3820 4805 3.387374 TCAATGGTTGTTTTGGCTGTCAT 59.613 39.130 0.00 0.00 0.00 3.06
3848 4866 4.561105 GGCATAGCAGTACTGTTCTATCC 58.439 47.826 23.44 18.06 0.00 2.59
3849 4867 4.561105 GCATAGCAGTACTGTTCTATCCC 58.439 47.826 23.44 11.49 0.00 3.85
3866 4884 1.742768 CCAGGCCATCCTAGACGAC 59.257 63.158 5.01 0.00 41.93 4.34
3875 4894 1.542492 TCCTAGACGACAGTTGGACC 58.458 55.000 0.00 0.00 0.00 4.46
3882 4901 1.202533 ACGACAGTTGGACCAAGACTG 60.203 52.381 20.31 20.31 44.77 3.51
3897 4916 2.042464 AGACTGTGTCCGATGCCATAT 58.958 47.619 0.00 0.00 32.18 1.78
3911 4930 2.509131 TGCCATATGATCAACACCCTGA 59.491 45.455 3.65 0.00 0.00 3.86
3928 4947 2.622452 CCTGAAAATGGGCTCAGATGGT 60.622 50.000 0.00 0.00 41.38 3.55
3965 4984 2.036733 ACTACAGCCGTGACTTTGCTTA 59.963 45.455 0.00 0.00 31.77 3.09
3966 4985 1.226746 ACAGCCGTGACTTTGCTTAC 58.773 50.000 0.00 0.00 31.77 2.34
3998 5017 2.418976 GGATAAAAACGGACAGACCAGC 59.581 50.000 0.00 0.00 38.90 4.85
4010 5029 5.428253 GGACAGACCAGCTTCACATATTTA 58.572 41.667 0.00 0.00 38.79 1.40
4011 5030 6.058183 GGACAGACCAGCTTCACATATTTAT 58.942 40.000 0.00 0.00 38.79 1.40
4012 5031 6.203723 GGACAGACCAGCTTCACATATTTATC 59.796 42.308 0.00 0.00 38.79 1.75
4013 5032 5.755375 ACAGACCAGCTTCACATATTTATCG 59.245 40.000 0.00 0.00 0.00 2.92
4014 5033 5.178252 CAGACCAGCTTCACATATTTATCGG 59.822 44.000 0.00 0.00 0.00 4.18
4015 5034 3.815401 ACCAGCTTCACATATTTATCGGC 59.185 43.478 0.00 0.00 0.00 5.54
4016 5035 3.814842 CCAGCTTCACATATTTATCGGCA 59.185 43.478 0.00 0.00 0.00 5.69
4017 5036 4.083643 CCAGCTTCACATATTTATCGGCAG 60.084 45.833 0.00 0.00 0.00 4.85
4021 5040 6.936900 AGCTTCACATATTTATCGGCAGTTAT 59.063 34.615 0.00 0.00 0.00 1.89
4022 5041 7.118390 AGCTTCACATATTTATCGGCAGTTATC 59.882 37.037 0.00 0.00 0.00 1.75
4024 5043 5.867174 TCACATATTTATCGGCAGTTATCGG 59.133 40.000 0.00 0.00 0.00 4.18
4025 5044 4.630069 ACATATTTATCGGCAGTTATCGGC 59.370 41.667 0.00 0.00 0.00 5.54
4026 5045 2.605837 TTTATCGGCAGTTATCGGCA 57.394 45.000 0.00 0.00 36.53 5.69
4027 5046 2.831685 TTATCGGCAGTTATCGGCAT 57.168 45.000 0.00 0.00 36.53 4.40
4028 5047 2.363788 TATCGGCAGTTATCGGCATC 57.636 50.000 0.00 0.00 36.53 3.91
4029 5048 0.320771 ATCGGCAGTTATCGGCATCC 60.321 55.000 0.00 0.00 36.53 3.51
4030 5049 1.069765 CGGCAGTTATCGGCATCCT 59.930 57.895 0.00 0.00 36.53 3.24
4031 5050 0.532862 CGGCAGTTATCGGCATCCTT 60.533 55.000 0.00 0.00 36.53 3.36
4032 5051 1.680338 GGCAGTTATCGGCATCCTTT 58.320 50.000 0.00 0.00 36.53 3.11
4033 5052 2.805295 CGGCAGTTATCGGCATCCTTTA 60.805 50.000 0.00 0.00 36.53 1.85
4034 5053 3.412386 GGCAGTTATCGGCATCCTTTAT 58.588 45.455 0.00 0.00 36.53 1.40
4035 5054 3.821033 GGCAGTTATCGGCATCCTTTATT 59.179 43.478 0.00 0.00 36.53 1.40
4036 5055 4.320494 GGCAGTTATCGGCATCCTTTATTG 60.320 45.833 0.00 0.00 36.53 1.90
4037 5056 4.515191 GCAGTTATCGGCATCCTTTATTGA 59.485 41.667 0.00 0.00 35.02 2.57
4038 5057 5.182001 GCAGTTATCGGCATCCTTTATTGAT 59.818 40.000 0.00 0.00 35.02 2.57
4039 5058 6.621596 GCAGTTATCGGCATCCTTTATTGATC 60.622 42.308 0.00 0.00 35.02 2.92
4040 5059 6.652481 CAGTTATCGGCATCCTTTATTGATCT 59.348 38.462 0.00 0.00 0.00 2.75
4070 5089 7.939782 TCACATTATTGAAACACACTGAACAT 58.060 30.769 0.00 0.00 0.00 2.71
4072 5091 9.333497 CACATTATTGAAACACACTGAACATAG 57.667 33.333 0.00 0.00 0.00 2.23
4077 5096 6.358118 TGAAACACACTGAACATAGAACAC 57.642 37.500 0.00 0.00 0.00 3.32
4080 5099 4.883083 ACACACTGAACATAGAACACGAT 58.117 39.130 0.00 0.00 0.00 3.73
4136 5155 5.590259 CCAGGTCGTTGATCTAAAATTGGAT 59.410 40.000 0.00 0.00 0.00 3.41
4148 5167 2.698855 AATTGGATGACTCGTGGAGG 57.301 50.000 0.00 0.00 33.35 4.30
4149 5168 0.833287 ATTGGATGACTCGTGGAGGG 59.167 55.000 0.00 0.00 33.35 4.30
4150 5169 1.899437 TTGGATGACTCGTGGAGGGC 61.899 60.000 0.00 0.00 33.35 5.19
4151 5170 2.060980 GGATGACTCGTGGAGGGCT 61.061 63.158 0.00 0.00 33.35 5.19
4152 5171 1.142748 GATGACTCGTGGAGGGCTG 59.857 63.158 0.00 0.00 33.35 4.85
4153 5172 2.303549 GATGACTCGTGGAGGGCTGG 62.304 65.000 0.00 0.00 33.35 4.85
4154 5173 2.680352 GACTCGTGGAGGGCTGGA 60.680 66.667 0.00 0.00 33.35 3.86
4182 5201 2.158449 GTCAATGACTCAGCGAACCAAG 59.842 50.000 6.07 0.00 0.00 3.61
4184 5203 2.376808 ATGACTCAGCGAACCAAGAG 57.623 50.000 0.00 0.00 0.00 2.85
4186 5205 1.347817 GACTCAGCGAACCAAGAGCG 61.348 60.000 0.00 0.00 35.78 5.03
4191 5210 2.167861 GCGAACCAAGAGCGCCTAG 61.168 63.158 2.29 0.00 44.55 3.02
4192 5211 1.511305 CGAACCAAGAGCGCCTAGA 59.489 57.895 2.29 0.00 0.00 2.43
4193 5212 0.526524 CGAACCAAGAGCGCCTAGAG 60.527 60.000 2.29 0.00 0.00 2.43
4194 5213 0.808060 GAACCAAGAGCGCCTAGAGC 60.808 60.000 2.29 0.00 38.52 4.09
4195 5214 1.544825 AACCAAGAGCGCCTAGAGCA 61.545 55.000 2.29 0.00 44.04 4.26
4196 5215 1.227205 CCAAGAGCGCCTAGAGCAG 60.227 63.158 2.29 2.99 44.04 4.24
4197 5216 1.515020 CAAGAGCGCCTAGAGCAGT 59.485 57.895 2.29 0.00 44.04 4.40
4200 5219 1.226831 GAGCGCCTAGAGCAGTGAC 60.227 63.158 2.29 0.00 44.04 3.67
4201 5220 2.580867 GCGCCTAGAGCAGTGACG 60.581 66.667 0.00 0.00 44.04 4.35
4202 5221 2.103143 CGCCTAGAGCAGTGACGG 59.897 66.667 0.00 0.00 44.04 4.79
4203 5222 2.701780 CGCCTAGAGCAGTGACGGT 61.702 63.158 0.00 0.00 44.04 4.83
4255 5280 2.606587 GGAGCTTGGGCCAAGAGGA 61.607 63.158 42.69 12.78 43.42 3.71
4290 5315 1.202428 GGCGACCTAAAGCAGTAGGAG 60.202 57.143 17.21 11.93 43.06 3.69
4291 5316 1.202428 GCGACCTAAAGCAGTAGGAGG 60.202 57.143 17.21 10.16 43.06 4.30
4292 5317 2.376109 CGACCTAAAGCAGTAGGAGGA 58.624 52.381 17.21 0.00 43.06 3.71
4293 5318 2.359531 CGACCTAAAGCAGTAGGAGGAG 59.640 54.545 17.21 4.29 43.06 3.69
4294 5319 2.101750 GACCTAAAGCAGTAGGAGGAGC 59.898 54.545 17.21 0.00 43.06 4.70
4295 5320 2.111384 CCTAAAGCAGTAGGAGGAGCA 58.889 52.381 6.85 0.00 43.06 4.26
4296 5321 2.501723 CCTAAAGCAGTAGGAGGAGCAA 59.498 50.000 6.85 0.00 43.06 3.91
4297 5322 3.055094 CCTAAAGCAGTAGGAGGAGCAAA 60.055 47.826 6.85 0.00 43.06 3.68
4298 5323 3.728385 AAAGCAGTAGGAGGAGCAAAT 57.272 42.857 0.00 0.00 0.00 2.32
4299 5324 2.706339 AGCAGTAGGAGGAGCAAATG 57.294 50.000 0.00 0.00 0.00 2.32
4300 5325 1.211457 AGCAGTAGGAGGAGCAAATGG 59.789 52.381 0.00 0.00 0.00 3.16
4301 5326 1.748591 GCAGTAGGAGGAGCAAATGGG 60.749 57.143 0.00 0.00 0.00 4.00
4302 5327 0.548510 AGTAGGAGGAGCAAATGGGC 59.451 55.000 0.00 0.00 0.00 5.36
4304 5329 0.548031 TAGGAGGAGCAAATGGGCTG 59.452 55.000 0.00 0.00 45.99 4.85
4305 5330 1.755783 GGAGGAGCAAATGGGCTGG 60.756 63.158 0.00 0.00 45.99 4.85
4306 5331 1.304282 GAGGAGCAAATGGGCTGGA 59.696 57.895 0.00 0.00 45.99 3.86
4307 5332 0.750911 GAGGAGCAAATGGGCTGGAG 60.751 60.000 0.00 0.00 45.99 3.86
4308 5333 1.755783 GGAGCAAATGGGCTGGAGG 60.756 63.158 0.00 0.00 45.99 4.30
4309 5334 1.755783 GAGCAAATGGGCTGGAGGG 60.756 63.158 0.00 0.00 45.99 4.30
4310 5335 3.464494 GCAAATGGGCTGGAGGGC 61.464 66.667 0.00 0.00 40.05 5.19
4311 5336 3.142838 CAAATGGGCTGGAGGGCG 61.143 66.667 0.00 0.00 41.87 6.13
4312 5337 4.447342 AAATGGGCTGGAGGGCGG 62.447 66.667 0.00 0.00 41.87 6.13
4317 5342 4.189580 GGCTGGAGGGCGGCATAA 62.190 66.667 12.47 0.00 0.00 1.90
4318 5343 2.124320 GCTGGAGGGCGGCATAAA 60.124 61.111 12.47 0.00 0.00 1.40
4319 5344 2.189499 GCTGGAGGGCGGCATAAAG 61.189 63.158 12.47 5.96 0.00 1.85
4320 5345 2.124320 TGGAGGGCGGCATAAAGC 60.124 61.111 12.47 0.00 44.65 3.51
4330 5355 3.055144 GCATAAAGCAGGCTTTGGC 57.945 52.632 25.15 22.88 44.84 4.52
4331 5356 0.533951 GCATAAAGCAGGCTTTGGCT 59.466 50.000 25.15 10.08 44.84 4.75
4332 5357 1.750778 GCATAAAGCAGGCTTTGGCTA 59.249 47.619 25.15 9.08 44.84 3.93
4333 5358 2.363359 GCATAAAGCAGGCTTTGGCTAT 59.637 45.455 25.15 10.82 44.84 2.97
4334 5359 3.569701 GCATAAAGCAGGCTTTGGCTATA 59.430 43.478 25.15 8.08 44.84 1.31
4335 5360 4.219288 GCATAAAGCAGGCTTTGGCTATAT 59.781 41.667 25.15 9.86 44.84 0.86
4336 5361 5.279156 GCATAAAGCAGGCTTTGGCTATATT 60.279 40.000 25.15 2.43 44.84 1.28
4337 5362 6.739565 GCATAAAGCAGGCTTTGGCTATATTT 60.740 38.462 25.15 1.75 44.84 1.40
4338 5363 4.926140 AAGCAGGCTTTGGCTATATTTC 57.074 40.909 0.00 0.00 40.01 2.17
4339 5364 3.902218 AGCAGGCTTTGGCTATATTTCA 58.098 40.909 0.00 0.00 38.90 2.69
4340 5365 3.633986 AGCAGGCTTTGGCTATATTTCAC 59.366 43.478 0.00 0.00 38.90 3.18
4341 5366 3.633986 GCAGGCTTTGGCTATATTTCACT 59.366 43.478 0.00 0.00 36.44 3.41
4342 5367 4.821805 GCAGGCTTTGGCTATATTTCACTA 59.178 41.667 0.00 0.00 36.44 2.74
4343 5368 5.474876 GCAGGCTTTGGCTATATTTCACTAT 59.525 40.000 0.00 0.00 36.44 2.12
4344 5369 6.655003 GCAGGCTTTGGCTATATTTCACTATA 59.345 38.462 0.00 0.00 36.44 1.31
4345 5370 7.361286 GCAGGCTTTGGCTATATTTCACTATAC 60.361 40.741 0.00 0.00 36.44 1.47
4346 5371 6.874134 AGGCTTTGGCTATATTTCACTATACG 59.126 38.462 0.00 0.00 36.44 3.06
4347 5372 6.649557 GGCTTTGGCTATATTTCACTATACGT 59.350 38.462 0.00 0.00 38.73 3.57
4348 5373 7.816031 GGCTTTGGCTATATTTCACTATACGTA 59.184 37.037 0.00 0.00 38.73 3.57
4349 5374 8.645487 GCTTTGGCTATATTTCACTATACGTAC 58.355 37.037 0.00 0.00 35.22 3.67
4350 5375 9.136952 CTTTGGCTATATTTCACTATACGTACC 57.863 37.037 0.00 0.00 0.00 3.34
4351 5376 8.413309 TTGGCTATATTTCACTATACGTACCT 57.587 34.615 0.00 0.00 0.00 3.08
4352 5377 9.519191 TTGGCTATATTTCACTATACGTACCTA 57.481 33.333 0.00 0.00 0.00 3.08
4353 5378 9.690913 TGGCTATATTTCACTATACGTACCTAT 57.309 33.333 0.00 0.00 0.00 2.57
4359 5384 6.655078 TTCACTATACGTACCTATTTCCCC 57.345 41.667 0.00 0.00 0.00 4.81
4360 5385 5.957132 TCACTATACGTACCTATTTCCCCT 58.043 41.667 0.00 0.00 0.00 4.79
4361 5386 7.090319 TCACTATACGTACCTATTTCCCCTA 57.910 40.000 0.00 0.00 0.00 3.53
4362 5387 7.170965 TCACTATACGTACCTATTTCCCCTAG 58.829 42.308 0.00 0.00 0.00 3.02
4363 5388 6.376581 CACTATACGTACCTATTTCCCCTAGG 59.623 46.154 0.06 0.06 41.37 3.02
4364 5389 2.968271 ACGTACCTATTTCCCCTAGGG 58.032 52.381 22.25 22.25 46.11 3.53
4365 5390 2.248423 ACGTACCTATTTCCCCTAGGGT 59.752 50.000 26.66 10.54 44.74 4.34
4366 5391 3.310879 ACGTACCTATTTCCCCTAGGGTT 60.311 47.826 26.66 10.66 44.74 4.11
4367 5392 3.713248 CGTACCTATTTCCCCTAGGGTTT 59.287 47.826 26.66 10.30 44.74 3.27
4368 5393 4.202295 CGTACCTATTTCCCCTAGGGTTTC 60.202 50.000 26.66 4.10 44.74 2.78
4369 5394 2.775960 ACCTATTTCCCCTAGGGTTTCG 59.224 50.000 26.66 11.24 44.74 3.46
4370 5395 2.486727 CCTATTTCCCCTAGGGTTTCGC 60.487 54.545 26.66 0.00 44.74 4.70
4371 5396 0.257905 ATTTCCCCTAGGGTTTCGCC 59.742 55.000 26.66 0.00 44.74 5.54
4372 5397 0.843343 TTTCCCCTAGGGTTTCGCCT 60.843 55.000 26.66 0.00 44.74 5.52
4373 5398 0.043032 TTCCCCTAGGGTTTCGCCTA 59.957 55.000 26.66 0.00 44.74 3.93
4374 5399 0.398098 TCCCCTAGGGTTTCGCCTAG 60.398 60.000 26.66 7.80 44.74 3.02
4377 5402 2.912020 CTAGGGTTTCGCCTAGGGT 58.088 57.895 11.72 0.00 37.43 4.34
4378 5403 2.077687 CTAGGGTTTCGCCTAGGGTA 57.922 55.000 11.72 0.00 37.43 3.69
4379 5404 1.685517 CTAGGGTTTCGCCTAGGGTAC 59.314 57.143 11.72 4.28 37.43 3.34
4380 5405 0.979709 AGGGTTTCGCCTAGGGTACC 60.980 60.000 11.72 2.17 43.95 3.34
4381 5406 1.976132 GGGTTTCGCCTAGGGTACCC 61.976 65.000 24.65 24.65 44.50 3.69
4393 5418 1.600638 GGTACCCAAACTCCTCCGG 59.399 63.158 0.00 0.00 0.00 5.14
4394 5419 1.078637 GTACCCAAACTCCTCCGGC 60.079 63.158 0.00 0.00 0.00 6.13
4395 5420 1.536907 TACCCAAACTCCTCCGGCA 60.537 57.895 0.00 0.00 0.00 5.69
4396 5421 1.128809 TACCCAAACTCCTCCGGCAA 61.129 55.000 0.00 0.00 0.00 4.52
4397 5422 1.000896 CCCAAACTCCTCCGGCAAT 60.001 57.895 0.00 0.00 0.00 3.56
4398 5423 0.611896 CCCAAACTCCTCCGGCAATT 60.612 55.000 0.00 0.00 0.00 2.32
4399 5424 0.811281 CCAAACTCCTCCGGCAATTC 59.189 55.000 0.00 0.00 0.00 2.17
4400 5425 0.811281 CAAACTCCTCCGGCAATTCC 59.189 55.000 0.00 0.00 0.00 3.01
4401 5426 0.404040 AAACTCCTCCGGCAATTCCA 59.596 50.000 0.00 0.00 34.01 3.53
4402 5427 0.322546 AACTCCTCCGGCAATTCCAC 60.323 55.000 0.00 0.00 34.01 4.02
4403 5428 1.452108 CTCCTCCGGCAATTCCACC 60.452 63.158 0.00 0.00 34.01 4.61
4408 5433 2.046314 CGGCAATTCCACCGGAGT 60.046 61.111 9.46 0.00 45.74 3.85
4409 5434 2.106683 CGGCAATTCCACCGGAGTC 61.107 63.158 9.46 0.00 45.74 3.36
4410 5435 1.749258 GGCAATTCCACCGGAGTCC 60.749 63.158 9.46 0.00 31.21 3.85
4411 5436 1.002624 GCAATTCCACCGGAGTCCA 60.003 57.895 9.46 0.00 31.21 4.02
4412 5437 1.305930 GCAATTCCACCGGAGTCCAC 61.306 60.000 9.46 0.00 31.21 4.02
4413 5438 0.676782 CAATTCCACCGGAGTCCACC 60.677 60.000 9.46 0.00 31.21 4.61
4414 5439 1.131303 AATTCCACCGGAGTCCACCA 61.131 55.000 9.46 0.00 31.21 4.17
4415 5440 0.914417 ATTCCACCGGAGTCCACCAT 60.914 55.000 9.46 0.00 31.21 3.55
4416 5441 1.131303 TTCCACCGGAGTCCACCATT 61.131 55.000 9.46 0.00 31.21 3.16
4417 5442 1.131303 TCCACCGGAGTCCACCATTT 61.131 55.000 9.46 0.00 0.00 2.32
4418 5443 0.251165 CCACCGGAGTCCACCATTTT 60.251 55.000 9.46 0.00 0.00 1.82
4419 5444 1.616159 CACCGGAGTCCACCATTTTT 58.384 50.000 9.46 0.00 0.00 1.94
4420 5445 1.539827 CACCGGAGTCCACCATTTTTC 59.460 52.381 9.46 0.00 0.00 2.29
4421 5446 1.173913 CCGGAGTCCACCATTTTTCC 58.826 55.000 10.49 0.00 0.00 3.13
4422 5447 1.271926 CCGGAGTCCACCATTTTTCCT 60.272 52.381 10.49 0.00 0.00 3.36
4423 5448 1.812571 CGGAGTCCACCATTTTTCCTG 59.187 52.381 10.49 0.00 0.00 3.86
4424 5449 1.546029 GGAGTCCACCATTTTTCCTGC 59.454 52.381 3.60 0.00 0.00 4.85
4425 5450 2.519013 GAGTCCACCATTTTTCCTGCT 58.481 47.619 0.00 0.00 0.00 4.24
4426 5451 2.229784 GAGTCCACCATTTTTCCTGCTG 59.770 50.000 0.00 0.00 0.00 4.41
4427 5452 1.963515 GTCCACCATTTTTCCTGCTGT 59.036 47.619 0.00 0.00 0.00 4.40
4428 5453 2.365293 GTCCACCATTTTTCCTGCTGTT 59.635 45.455 0.00 0.00 0.00 3.16
4429 5454 3.037549 TCCACCATTTTTCCTGCTGTTT 58.962 40.909 0.00 0.00 0.00 2.83
4430 5455 3.069443 TCCACCATTTTTCCTGCTGTTTC 59.931 43.478 0.00 0.00 0.00 2.78
4431 5456 3.052036 CACCATTTTTCCTGCTGTTTCG 58.948 45.455 0.00 0.00 0.00 3.46
4432 5457 2.955660 ACCATTTTTCCTGCTGTTTCGA 59.044 40.909 0.00 0.00 0.00 3.71
4433 5458 3.243401 ACCATTTTTCCTGCTGTTTCGAC 60.243 43.478 0.00 0.00 0.00 4.20
4434 5459 3.308530 CATTTTTCCTGCTGTTTCGACC 58.691 45.455 0.00 0.00 0.00 4.79
4435 5460 0.941542 TTTTCCTGCTGTTTCGACCG 59.058 50.000 0.00 0.00 0.00 4.79
4436 5461 0.882927 TTTCCTGCTGTTTCGACCGG 60.883 55.000 0.00 0.00 0.00 5.28
4437 5462 1.750341 TTCCTGCTGTTTCGACCGGA 61.750 55.000 9.46 0.00 0.00 5.14
4438 5463 1.738099 CCTGCTGTTTCGACCGGAG 60.738 63.158 9.46 0.85 0.00 4.63
4439 5464 2.357034 TGCTGTTTCGACCGGAGC 60.357 61.111 9.46 5.03 0.00 4.70
4440 5465 3.119096 GCTGTTTCGACCGGAGCC 61.119 66.667 9.46 0.00 0.00 4.70
4441 5466 2.809601 CTGTTTCGACCGGAGCCG 60.810 66.667 9.46 9.04 39.44 5.52
4443 5468 4.736896 GTTTCGACCGGAGCCGCT 62.737 66.667 9.46 0.00 38.24 5.52
4444 5469 4.430765 TTTCGACCGGAGCCGCTC 62.431 66.667 9.46 12.27 38.24 5.03
4462 5487 3.484547 CGGCGTCGGGCAGTAAAC 61.485 66.667 0.00 0.00 46.16 2.01
4463 5488 3.122971 GGCGTCGGGCAGTAAACC 61.123 66.667 0.00 0.00 46.16 3.27
4464 5489 2.047560 GCGTCGGGCAGTAAACCT 60.048 61.111 0.00 0.00 42.87 3.50
4465 5490 1.216178 GCGTCGGGCAGTAAACCTA 59.784 57.895 0.00 0.00 42.87 3.08
4466 5491 0.179092 GCGTCGGGCAGTAAACCTAT 60.179 55.000 0.00 0.00 42.87 2.57
4467 5492 1.849097 CGTCGGGCAGTAAACCTATC 58.151 55.000 0.00 0.00 0.00 2.08
4468 5493 1.407979 CGTCGGGCAGTAAACCTATCT 59.592 52.381 0.00 0.00 0.00 1.98
4469 5494 2.798499 CGTCGGGCAGTAAACCTATCTG 60.798 54.545 0.00 0.00 0.00 2.90
4473 5498 2.311124 GCAGTAAACCTATCTGCGGT 57.689 50.000 0.00 0.00 43.49 5.68
4474 5499 2.202566 GCAGTAAACCTATCTGCGGTC 58.797 52.381 0.00 0.00 43.49 4.79
4475 5500 2.159085 GCAGTAAACCTATCTGCGGTCT 60.159 50.000 0.00 0.00 43.49 3.85
4476 5501 3.679083 GCAGTAAACCTATCTGCGGTCTT 60.679 47.826 0.00 0.00 43.49 3.01
4477 5502 3.865745 CAGTAAACCTATCTGCGGTCTTG 59.134 47.826 0.00 0.00 32.46 3.02
4478 5503 2.403252 AAACCTATCTGCGGTCTTGG 57.597 50.000 0.00 0.00 32.46 3.61
4479 5504 0.107654 AACCTATCTGCGGTCTTGGC 60.108 55.000 0.00 0.00 32.46 4.52
4480 5505 1.264749 ACCTATCTGCGGTCTTGGCA 61.265 55.000 0.00 0.00 38.92 4.92
4481 5506 0.811616 CCTATCTGCGGTCTTGGCAC 60.812 60.000 0.00 0.00 36.24 5.01
4482 5507 1.148157 CTATCTGCGGTCTTGGCACG 61.148 60.000 0.00 0.00 36.24 5.34
4499 5524 4.036804 GCGTGCAACATGGCGGAA 62.037 61.111 0.00 0.00 35.74 4.30
4500 5525 2.126888 CGTGCAACATGGCGGAAC 60.127 61.111 0.00 0.00 35.74 3.62
4501 5526 2.258286 GTGCAACATGGCGGAACC 59.742 61.111 0.00 0.00 36.32 3.62
4510 5535 3.663202 GGCGGAACCAACGTCAAT 58.337 55.556 0.00 0.00 38.86 2.57
4511 5536 1.953772 GGCGGAACCAACGTCAATT 59.046 52.632 0.00 0.00 38.86 2.32
4512 5537 0.109919 GGCGGAACCAACGTCAATTC 60.110 55.000 0.00 0.00 38.86 2.17
4513 5538 0.589223 GCGGAACCAACGTCAATTCA 59.411 50.000 0.00 0.00 0.00 2.57
4514 5539 1.002251 GCGGAACCAACGTCAATTCAA 60.002 47.619 0.00 0.00 0.00 2.69
4515 5540 2.916111 CGGAACCAACGTCAATTCAAG 58.084 47.619 0.00 0.00 0.00 3.02
4516 5541 2.350388 CGGAACCAACGTCAATTCAAGG 60.350 50.000 0.00 0.00 0.00 3.61
4517 5542 2.607038 GGAACCAACGTCAATTCAAGGC 60.607 50.000 0.00 0.00 0.00 4.35
4518 5543 0.591170 ACCAACGTCAATTCAAGGCG 59.409 50.000 0.00 0.00 0.00 5.52
4519 5544 0.871722 CCAACGTCAATTCAAGGCGA 59.128 50.000 0.00 0.00 0.00 5.54
4520 5545 1.135972 CCAACGTCAATTCAAGGCGAG 60.136 52.381 0.00 0.00 0.00 5.03
4521 5546 1.135972 CAACGTCAATTCAAGGCGAGG 60.136 52.381 0.00 0.00 0.00 4.63
4522 5547 0.673644 ACGTCAATTCAAGGCGAGGG 60.674 55.000 0.00 0.00 0.00 4.30
4523 5548 0.391130 CGTCAATTCAAGGCGAGGGA 60.391 55.000 0.00 0.00 0.00 4.20
4524 5549 1.373570 GTCAATTCAAGGCGAGGGAG 58.626 55.000 0.00 0.00 0.00 4.30
4525 5550 0.253044 TCAATTCAAGGCGAGGGAGG 59.747 55.000 0.00 0.00 0.00 4.30
4526 5551 0.749454 CAATTCAAGGCGAGGGAGGG 60.749 60.000 0.00 0.00 0.00 4.30
4527 5552 2.558380 AATTCAAGGCGAGGGAGGGC 62.558 60.000 0.00 0.00 0.00 5.19
4529 5554 4.479993 CAAGGCGAGGGAGGGCAG 62.480 72.222 0.00 0.00 0.00 4.85
4535 5560 4.095400 GAGGGAGGGCAGGAGGGA 62.095 72.222 0.00 0.00 0.00 4.20
4536 5561 4.101077 AGGGAGGGCAGGAGGGAG 62.101 72.222 0.00 0.00 0.00 4.30
4537 5562 4.095400 GGGAGGGCAGGAGGGAGA 62.095 72.222 0.00 0.00 0.00 3.71
4538 5563 2.445654 GGAGGGCAGGAGGGAGAG 60.446 72.222 0.00 0.00 0.00 3.20
4539 5564 2.693017 GAGGGCAGGAGGGAGAGA 59.307 66.667 0.00 0.00 0.00 3.10
4540 5565 1.457455 GAGGGCAGGAGGGAGAGAG 60.457 68.421 0.00 0.00 0.00 3.20
4541 5566 2.445654 GGGCAGGAGGGAGAGAGG 60.446 72.222 0.00 0.00 0.00 3.69
4542 5567 2.445654 GGCAGGAGGGAGAGAGGG 60.446 72.222 0.00 0.00 0.00 4.30
4543 5568 2.693017 GCAGGAGGGAGAGAGGGA 59.307 66.667 0.00 0.00 0.00 4.20
4544 5569 1.457455 GCAGGAGGGAGAGAGGGAG 60.457 68.421 0.00 0.00 0.00 4.30
4545 5570 1.232792 CAGGAGGGAGAGAGGGAGG 59.767 68.421 0.00 0.00 0.00 4.30
4546 5571 1.087725 AGGAGGGAGAGAGGGAGGA 59.912 63.158 0.00 0.00 0.00 3.71
4547 5572 0.998945 AGGAGGGAGAGAGGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
4548 5573 0.996762 GGAGGGAGAGAGGGAGGAGA 60.997 65.000 0.00 0.00 0.00 3.71
4549 5574 0.478507 GAGGGAGAGAGGGAGGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
4550 5575 0.998945 AGGGAGAGAGGGAGGAGAGG 60.999 65.000 0.00 0.00 0.00 3.69
4551 5576 0.996762 GGGAGAGAGGGAGGAGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
4552 5577 0.185175 GGAGAGAGGGAGGAGAGGAC 59.815 65.000 0.00 0.00 0.00 3.85
4553 5578 0.923358 GAGAGAGGGAGGAGAGGACA 59.077 60.000 0.00 0.00 0.00 4.02
4554 5579 0.926293 AGAGAGGGAGGAGAGGACAG 59.074 60.000 0.00 0.00 0.00 3.51
4555 5580 0.923358 GAGAGGGAGGAGAGGACAGA 59.077 60.000 0.00 0.00 0.00 3.41
4556 5581 0.926293 AGAGGGAGGAGAGGACAGAG 59.074 60.000 0.00 0.00 0.00 3.35
4557 5582 0.923358 GAGGGAGGAGAGGACAGAGA 59.077 60.000 0.00 0.00 0.00 3.10
4558 5583 1.499007 GAGGGAGGAGAGGACAGAGAT 59.501 57.143 0.00 0.00 0.00 2.75
4559 5584 1.936631 AGGGAGGAGAGGACAGAGATT 59.063 52.381 0.00 0.00 0.00 2.40
4560 5585 2.038659 GGGAGGAGAGGACAGAGATTG 58.961 57.143 0.00 0.00 0.00 2.67
4561 5586 2.038659 GGAGGAGAGGACAGAGATTGG 58.961 57.143 0.00 0.00 0.00 3.16
4562 5587 2.358721 GGAGGAGAGGACAGAGATTGGA 60.359 54.545 0.00 0.00 0.00 3.53
4563 5588 3.575805 GAGGAGAGGACAGAGATTGGAT 58.424 50.000 0.00 0.00 0.00 3.41
4564 5589 3.573967 GAGGAGAGGACAGAGATTGGATC 59.426 52.174 0.00 0.00 0.00 3.36
4565 5590 2.295909 GGAGAGGACAGAGATTGGATCG 59.704 54.545 0.00 0.00 0.00 3.69
4566 5591 2.955660 GAGAGGACAGAGATTGGATCGT 59.044 50.000 0.00 0.00 0.00 3.73
4567 5592 2.692557 AGAGGACAGAGATTGGATCGTG 59.307 50.000 0.00 0.00 0.00 4.35
4568 5593 1.759445 AGGACAGAGATTGGATCGTGG 59.241 52.381 0.00 0.00 0.00 4.94
4569 5594 1.482593 GGACAGAGATTGGATCGTGGT 59.517 52.381 0.00 0.00 0.00 4.16
4570 5595 2.482142 GGACAGAGATTGGATCGTGGTC 60.482 54.545 0.00 0.00 0.00 4.02
4571 5596 1.482593 ACAGAGATTGGATCGTGGTCC 59.517 52.381 0.00 0.00 38.81 4.46
4572 5597 1.759445 CAGAGATTGGATCGTGGTCCT 59.241 52.381 0.10 0.00 39.12 3.85
4573 5598 2.169352 CAGAGATTGGATCGTGGTCCTT 59.831 50.000 0.10 0.00 39.12 3.36
4574 5599 3.384789 CAGAGATTGGATCGTGGTCCTTA 59.615 47.826 0.10 0.00 39.12 2.69
4575 5600 3.639094 AGAGATTGGATCGTGGTCCTTAG 59.361 47.826 0.10 0.00 39.12 2.18
4576 5601 2.103263 AGATTGGATCGTGGTCCTTAGC 59.897 50.000 0.10 0.00 39.12 3.09
4577 5602 0.174845 TTGGATCGTGGTCCTTAGCG 59.825 55.000 0.10 0.00 39.12 4.26
4578 5603 0.681887 TGGATCGTGGTCCTTAGCGA 60.682 55.000 0.10 0.00 39.12 4.93
4579 5604 0.030908 GGATCGTGGTCCTTAGCGAG 59.969 60.000 0.00 0.00 36.79 5.03
4580 5605 0.595310 GATCGTGGTCCTTAGCGAGC 60.595 60.000 0.00 0.00 36.79 5.03
4581 5606 2.337749 ATCGTGGTCCTTAGCGAGCG 62.338 60.000 0.00 0.00 36.79 5.03
4582 5607 2.882876 GTGGTCCTTAGCGAGCGA 59.117 61.111 0.00 0.00 32.83 4.93
4583 5608 1.226717 GTGGTCCTTAGCGAGCGAG 60.227 63.158 0.00 0.00 32.83 5.03
4584 5609 2.413765 GGTCCTTAGCGAGCGAGG 59.586 66.667 12.29 12.29 0.00 4.63
4585 5610 2.278923 GTCCTTAGCGAGCGAGGC 60.279 66.667 13.27 7.18 0.00 4.70
4586 5611 3.889044 TCCTTAGCGAGCGAGGCG 61.889 66.667 13.27 0.00 35.00 5.52
4587 5612 3.889044 CCTTAGCGAGCGAGGCGA 61.889 66.667 7.41 0.00 35.00 5.54
4588 5613 2.352915 CTTAGCGAGCGAGGCGAG 60.353 66.667 0.00 0.00 35.00 5.03
4589 5614 3.815569 CTTAGCGAGCGAGGCGAGG 62.816 68.421 0.00 0.00 35.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 112 5.717119 AGCTTGCATTTTAGAAGTCCAATG 58.283 37.500 0.00 0.00 0.00 2.82
185 202 4.972733 TTCCGACCGTCCGTCCCA 62.973 66.667 0.00 0.00 38.36 4.37
245 262 0.843309 TCCTCTCCAAGTGGTTGCAA 59.157 50.000 0.00 0.00 36.34 4.08
256 273 0.541998 TCGGTGCTTCTTCCTCTCCA 60.542 55.000 0.00 0.00 0.00 3.86
297 314 1.553195 CGTTTGACACCGACGCATGA 61.553 55.000 0.00 0.00 0.00 3.07
299 316 2.314647 CCGTTTGACACCGACGCAT 61.315 57.895 0.00 0.00 35.60 4.73
317 334 2.279517 CCATGGTAGAGGCGACGC 60.280 66.667 12.43 12.43 0.00 5.19
353 370 1.600916 GATCCCTATGGGCGGCAAC 60.601 63.158 12.47 0.00 43.94 4.17
355 372 2.075566 TTGATCCCTATGGGCGGCA 61.076 57.895 12.47 0.00 43.94 5.69
411 429 4.626081 AGCTGCGCCGTCTTGGTT 62.626 61.111 4.18 0.00 41.21 3.67
437 486 0.980754 ATACCGTGAGATGGGTGCCA 60.981 55.000 0.00 0.00 37.09 4.92
439 488 0.464036 TCATACCGTGAGATGGGTGC 59.536 55.000 0.00 0.00 37.09 5.01
456 505 3.610619 CTGCTCCCACGCACCATCA 62.611 63.158 0.00 0.00 35.74 3.07
459 508 4.624364 CACTGCTCCCACGCACCA 62.624 66.667 0.00 0.00 35.74 4.17
488 537 2.436115 GTGGAGTAGGTTGCCGGC 60.436 66.667 22.73 22.73 0.00 6.13
489 538 2.240162 GAGGTGGAGTAGGTTGCCGG 62.240 65.000 0.00 0.00 0.00 6.13
523 573 0.179089 GCAGGCGACAGAGATGATGT 60.179 55.000 0.00 0.00 0.00 3.06
541 591 4.927782 TCTGTGTGTGCCCCGTGC 62.928 66.667 0.00 0.00 41.77 5.34
602 665 1.914531 ATAAACAACCCGCGGCGAAC 61.915 55.000 25.92 0.00 0.00 3.95
609 672 1.424403 GTTTGCCATAAACAACCCGC 58.576 50.000 0.00 0.00 0.00 6.13
617 680 1.609555 GTGTGGGTCGTTTGCCATAAA 59.390 47.619 0.00 0.00 0.00 1.40
620 683 1.152860 TGTGTGGGTCGTTTGCCAT 60.153 52.632 0.00 0.00 0.00 4.40
621 684 2.115911 GTGTGTGGGTCGTTTGCCA 61.116 57.895 0.00 0.00 0.00 4.92
622 685 2.115911 TGTGTGTGGGTCGTTTGCC 61.116 57.895 0.00 0.00 0.00 4.52
624 687 1.021202 ATGTGTGTGTGGGTCGTTTG 58.979 50.000 0.00 0.00 0.00 2.93
625 688 1.021202 CATGTGTGTGTGGGTCGTTT 58.979 50.000 0.00 0.00 0.00 3.60
628 691 2.945984 GCATGTGTGTGTGGGTCG 59.054 61.111 0.00 0.00 0.00 4.79
629 692 2.945984 CGCATGTGTGTGTGGGTC 59.054 61.111 0.00 0.00 0.00 4.46
630 693 3.286751 GCGCATGTGTGTGTGGGT 61.287 61.111 0.30 0.00 38.13 4.51
631 694 4.388080 CGCGCATGTGTGTGTGGG 62.388 66.667 8.75 0.00 41.45 4.61
638 701 3.773630 GTGTACGCGCGCATGTGT 61.774 61.111 32.58 22.42 36.40 3.72
640 703 3.773630 GTGTGTACGCGCGCATGT 61.774 61.111 32.58 23.57 35.83 3.21
642 705 3.773630 GTGTGTGTACGCGCGCAT 61.774 61.111 32.58 20.76 45.63 4.73
644 707 4.696172 GTGTGTGTGTACGCGCGC 62.696 66.667 32.58 23.91 40.18 6.86
646 709 2.026493 TTGTGTGTGTGTGTACGCGC 62.026 55.000 13.02 13.02 45.55 6.86
648 711 1.395608 AGTTTGTGTGTGTGTGTACGC 59.604 47.619 0.00 0.00 37.82 4.42
649 712 3.733024 AAGTTTGTGTGTGTGTGTACG 57.267 42.857 0.00 0.00 0.00 3.67
650 713 4.570935 CGTAAGTTTGTGTGTGTGTGTAC 58.429 43.478 0.00 0.00 0.00 2.90
651 714 4.843879 CGTAAGTTTGTGTGTGTGTGTA 57.156 40.909 0.00 0.00 0.00 2.90
652 715 3.733024 CGTAAGTTTGTGTGTGTGTGT 57.267 42.857 0.00 0.00 0.00 3.72
682 745 0.386731 ACAGTAATTTTGGCGCGCAC 60.387 50.000 34.42 22.27 0.00 5.34
685 748 2.911198 CGACAGTAATTTTGGCGCG 58.089 52.632 0.00 0.00 40.58 6.86
693 756 7.255569 TCACTATCGATTCAACGACAGTAATT 58.744 34.615 1.71 0.00 45.94 1.40
698 761 5.555256 GCATTCACTATCGATTCAACGACAG 60.555 44.000 1.71 0.00 44.84 3.51
700 763 4.267690 TGCATTCACTATCGATTCAACGAC 59.732 41.667 1.71 0.00 44.84 4.34
703 766 4.550831 CGGTGCATTCACTATCGATTCAAC 60.551 45.833 1.71 0.00 42.72 3.18
706 1053 3.123804 ACGGTGCATTCACTATCGATTC 58.876 45.455 1.71 0.00 42.72 2.52
714 1061 1.301716 AGCGAACGGTGCATTCACT 60.302 52.632 0.00 0.00 42.72 3.41
718 1065 1.163420 TTCACAGCGAACGGTGCATT 61.163 50.000 22.76 4.53 46.35 3.56
743 1090 8.025243 TGTTATATGAGGAACGTCAGTTTTTC 57.975 34.615 0.00 0.00 41.34 2.29
895 1289 6.432783 TCATTTGATTTTTCGCCTCTCCTTAA 59.567 34.615 0.00 0.00 0.00 1.85
896 1290 5.943416 TCATTTGATTTTTCGCCTCTCCTTA 59.057 36.000 0.00 0.00 0.00 2.69
971 1394 2.546494 GCAGTGCGGTGTTGCTCTT 61.546 57.895 0.00 0.00 36.62 2.85
1000 1423 2.158682 TGTCAGTTTGTGGTAGTGGCAT 60.159 45.455 0.00 0.00 0.00 4.40
1001 1424 1.210722 TGTCAGTTTGTGGTAGTGGCA 59.789 47.619 0.00 0.00 0.00 4.92
1152 1575 4.601084 TGTGGACCTAGGTAGAAGAAGAG 58.399 47.826 16.29 0.00 0.00 2.85
1301 1724 8.637986 GTGATACTTGATCTCAGGAATTACTCT 58.362 37.037 0.00 0.00 35.37 3.24
1312 1735 8.759481 ATGACTAGAAGTGATACTTGATCTCA 57.241 34.615 0.00 0.00 38.80 3.27
1318 1741 9.190858 GCATCTAATGACTAGAAGTGATACTTG 57.809 37.037 0.00 0.00 38.80 3.16
1330 1753 2.054363 CGTGCGGCATCTAATGACTAG 58.946 52.381 5.72 0.00 35.65 2.57
1648 2073 0.413037 ATTTGGGGGCCAATCAGTCA 59.587 50.000 4.39 0.00 43.55 3.41
1649 2074 1.571955 AATTTGGGGGCCAATCAGTC 58.428 50.000 4.39 0.00 43.55 3.51
1674 2099 2.292569 GCATACATGAATGCCAGTGAGG 59.707 50.000 0.00 0.00 45.31 3.86
1702 2584 6.211384 AGTTGGCCTTTAGCTCATACAAAAAT 59.789 34.615 3.32 0.00 43.05 1.82
1772 2662 4.974645 TTTAGAGGAGCCAAAGAACTCA 57.025 40.909 0.00 0.00 34.48 3.41
1784 2674 6.998968 ACTGAAGCAATGAATTTAGAGGAG 57.001 37.500 0.00 0.00 0.00 3.69
1785 2675 6.349611 GCAACTGAAGCAATGAATTTAGAGGA 60.350 38.462 0.00 0.00 0.00 3.71
1786 2676 5.803967 GCAACTGAAGCAATGAATTTAGAGG 59.196 40.000 0.00 0.00 0.00 3.69
1790 2680 6.689554 TCATGCAACTGAAGCAATGAATTTA 58.310 32.000 0.00 0.00 46.27 1.40
1808 2698 5.242171 ACTTCACATTTCAGTTCATCATGCA 59.758 36.000 0.00 0.00 0.00 3.96
1973 2875 6.939730 TGGTCAGTTGTCTGCTGAAATAATTA 59.060 34.615 0.00 0.00 43.57 1.40
1998 2900 6.552445 ACTTCCATCAGATAGTGCTAAACT 57.448 37.500 0.00 0.00 43.40 2.66
2103 3007 2.284190 GCAGGGTTGCTGAGTTCTATC 58.716 52.381 0.00 0.00 46.95 2.08
2106 3010 4.809070 GCAGGGTTGCTGAGTTCT 57.191 55.556 0.00 0.00 46.95 3.01
2150 3054 7.043961 TGTCAGGTGTAAATGTGCATTAAAA 57.956 32.000 0.00 0.00 0.00 1.52
2151 3055 6.641169 TGTCAGGTGTAAATGTGCATTAAA 57.359 33.333 0.00 0.00 0.00 1.52
2152 3056 6.641169 TTGTCAGGTGTAAATGTGCATTAA 57.359 33.333 0.00 0.00 0.00 1.40
2153 3057 6.832520 ATTGTCAGGTGTAAATGTGCATTA 57.167 33.333 0.00 0.00 0.00 1.90
2154 3058 5.726980 ATTGTCAGGTGTAAATGTGCATT 57.273 34.783 0.00 0.00 0.00 3.56
2155 3059 6.179756 TCTATTGTCAGGTGTAAATGTGCAT 58.820 36.000 0.00 0.00 0.00 3.96
2156 3060 5.555966 TCTATTGTCAGGTGTAAATGTGCA 58.444 37.500 0.00 0.00 0.00 4.57
2189 3093 6.575162 ACGCTCAAGGAAGTGATTAAAAAT 57.425 33.333 0.00 0.00 0.00 1.82
2195 3111 3.476552 TGAAACGCTCAAGGAAGTGATT 58.523 40.909 0.00 0.00 0.00 2.57
2211 3127 8.934507 AAGTACATCATAGCTAAGACTGAAAC 57.065 34.615 0.00 5.95 0.00 2.78
2213 3129 9.371136 CAAAAGTACATCATAGCTAAGACTGAA 57.629 33.333 0.00 0.00 0.00 3.02
2215 3131 8.598924 CACAAAAGTACATCATAGCTAAGACTG 58.401 37.037 0.00 4.25 0.00 3.51
2293 3210 7.150783 GAAACATATTTCCCAGCATATCTCC 57.849 40.000 0.00 0.00 38.67 3.71
2325 3243 3.818210 TGTTATTTGCCACAACTGACGAT 59.182 39.130 0.00 0.00 0.00 3.73
2328 3246 6.843069 ATTTTGTTATTTGCCACAACTGAC 57.157 33.333 0.00 0.00 32.57 3.51
2335 3253 7.224557 ACTGACTGAAATTTTGTTATTTGCCAC 59.775 33.333 0.00 0.00 0.00 5.01
2354 3272 1.241165 TGCATCCAAAGCACTGACTG 58.759 50.000 0.00 0.00 37.02 3.51
2401 3320 6.911250 AATTGGGAAGTAACGGAAAGATTT 57.089 33.333 0.00 0.00 0.00 2.17
2418 3337 5.221126 GCTCTACATCTTTGCCTTAATTGGG 60.221 44.000 0.00 0.00 0.00 4.12
2420 3339 6.690194 AGCTCTACATCTTTGCCTTAATTG 57.310 37.500 0.00 0.00 0.00 2.32
2434 3353 1.827969 ACTCGGAAGCAAGCTCTACAT 59.172 47.619 0.00 0.00 0.00 2.29
2487 3406 8.041323 ACTGATACTCAAAGGTACCTATGTTTG 58.959 37.037 16.67 15.81 0.00 2.93
2504 3423 8.851145 TCAAGGACTATATGACAACTGATACTC 58.149 37.037 0.00 0.00 0.00 2.59
2510 3429 8.950210 ACAATTTCAAGGACTATATGACAACTG 58.050 33.333 0.00 0.00 0.00 3.16
2511 3430 9.520515 AACAATTTCAAGGACTATATGACAACT 57.479 29.630 0.00 0.00 0.00 3.16
2516 3435 8.201464 TCGCTAACAATTTCAAGGACTATATGA 58.799 33.333 0.00 0.00 0.00 2.15
2521 3440 6.403049 TGATCGCTAACAATTTCAAGGACTA 58.597 36.000 0.00 0.00 0.00 2.59
2576 3495 1.999735 AGTCCGCACATATCGTTGTTG 59.000 47.619 0.00 0.00 0.00 3.33
2629 3548 5.212194 ACGTTGTTGCTCAATTTGACATAC 58.788 37.500 0.00 0.00 38.38 2.39
2630 3549 5.431420 ACGTTGTTGCTCAATTTGACATA 57.569 34.783 0.00 0.00 38.38 2.29
2643 3562 2.916716 CAGGAATGCATAACGTTGTTGC 59.083 45.455 23.41 23.41 36.91 4.17
2673 3592 8.333908 CAACAGTGCATTTTACAAATTTTGCTA 58.666 29.630 9.04 0.00 0.00 3.49
2813 3732 4.688879 TGACTTAAAACGCGAGATGACAAT 59.311 37.500 15.93 0.00 0.00 2.71
2814 3733 4.052608 TGACTTAAAACGCGAGATGACAA 58.947 39.130 15.93 0.00 0.00 3.18
2920 3895 7.228507 AGTGATGTATGTAAAAACTGCACTCAA 59.771 33.333 0.00 0.00 30.42 3.02
3102 4077 5.113383 CCAAACCTTGTAGGAAAACCAAAC 58.887 41.667 0.00 0.00 37.67 2.93
3165 4140 4.590553 TCCCTCCACAGGCCACCA 62.591 66.667 5.01 0.00 38.72 4.17
3266 4241 2.995466 AACACGACAATGCTGAATGG 57.005 45.000 0.00 0.00 0.00 3.16
3343 4318 2.303549 CTGAGGGGAGAAGCGCGAAT 62.304 60.000 12.10 0.00 0.00 3.34
3405 4380 0.470456 AGGTGTACCCGACAGGAACA 60.470 55.000 0.00 0.00 39.29 3.18
3492 4467 1.296392 CCACCTCGAACCATCTGCA 59.704 57.895 0.00 0.00 0.00 4.41
3495 4470 1.274703 ATGGCCACCTCGAACCATCT 61.275 55.000 8.16 0.00 38.55 2.90
3567 4542 2.303022 AGATCCCTTGAGTTTCTTCGCA 59.697 45.455 0.00 0.00 0.00 5.10
3600 4575 5.580691 CCTTTTTACGATATGTGCAGACAGA 59.419 40.000 0.00 0.00 34.87 3.41
3682 4658 5.545063 TCCACAGAGACACACAAATTCTA 57.455 39.130 0.00 0.00 0.00 2.10
3684 4660 4.576463 AGTTCCACAGAGACACACAAATTC 59.424 41.667 0.00 0.00 0.00 2.17
3820 4805 1.134818 CAGTACTGCTATGCCCACGAA 60.135 52.381 10.54 0.00 0.00 3.85
3848 4866 1.043116 TGTCGTCTAGGATGGCCTGG 61.043 60.000 3.32 0.00 46.45 4.45
3849 4867 0.387202 CTGTCGTCTAGGATGGCCTG 59.613 60.000 3.32 0.00 46.45 4.85
3866 4884 2.213499 GACACAGTCTTGGTCCAACTG 58.787 52.381 18.45 18.45 44.68 3.16
3875 4894 0.320683 TGGCATCGGACACAGTCTTG 60.321 55.000 0.00 0.00 32.47 3.02
3882 4901 3.044235 TGATCATATGGCATCGGACAC 57.956 47.619 1.65 2.33 32.32 3.67
3897 4916 3.164268 CCCATTTTCAGGGTGTTGATCA 58.836 45.455 0.00 0.00 41.61 2.92
3928 4947 2.290960 TGTAGTAGCCTGCAGAGTCAGA 60.291 50.000 17.39 0.00 36.19 3.27
3965 4984 0.320596 TTTTATCCGGCGGTTCACGT 60.321 50.000 27.32 8.68 46.52 4.49
3992 5011 4.083802 GCCGATAAATATGTGAAGCTGGTC 60.084 45.833 0.00 0.00 0.00 4.02
3993 5012 3.815401 GCCGATAAATATGTGAAGCTGGT 59.185 43.478 0.00 0.00 0.00 4.00
3994 5013 3.814842 TGCCGATAAATATGTGAAGCTGG 59.185 43.478 0.00 0.00 0.00 4.85
3995 5014 4.512944 ACTGCCGATAAATATGTGAAGCTG 59.487 41.667 0.00 0.00 0.00 4.24
3998 5017 7.411912 CCGATAACTGCCGATAAATATGTGAAG 60.412 40.741 0.00 0.00 0.00 3.02
4010 5029 0.320771 GGATGCCGATAACTGCCGAT 60.321 55.000 0.00 0.00 0.00 4.18
4011 5030 1.069090 GGATGCCGATAACTGCCGA 59.931 57.895 0.00 0.00 0.00 5.54
4012 5031 0.532862 AAGGATGCCGATAACTGCCG 60.533 55.000 0.00 0.00 0.00 5.69
4013 5032 1.680338 AAAGGATGCCGATAACTGCC 58.320 50.000 0.00 0.00 0.00 4.85
4014 5033 4.515191 TCAATAAAGGATGCCGATAACTGC 59.485 41.667 0.00 0.00 0.00 4.40
4015 5034 6.652481 AGATCAATAAAGGATGCCGATAACTG 59.348 38.462 0.00 0.00 0.00 3.16
4016 5035 6.773638 AGATCAATAAAGGATGCCGATAACT 58.226 36.000 0.00 0.00 0.00 2.24
4017 5036 7.440523 AAGATCAATAAAGGATGCCGATAAC 57.559 36.000 0.00 0.00 0.00 1.89
4021 5040 7.719193 TGAAATAAGATCAATAAAGGATGCCGA 59.281 33.333 0.00 0.00 0.00 5.54
4022 5041 7.805071 GTGAAATAAGATCAATAAAGGATGCCG 59.195 37.037 0.00 0.00 0.00 5.69
4055 5074 5.233476 TCGTGTTCTATGTTCAGTGTGTTTC 59.767 40.000 0.00 0.00 0.00 2.78
4096 5115 6.289064 ACGACCTGGATAATATTTCACCTTC 58.711 40.000 0.00 0.00 0.00 3.46
4099 5118 6.053005 TCAACGACCTGGATAATATTTCACC 58.947 40.000 0.00 0.00 0.00 4.02
4100 5119 7.657761 AGATCAACGACCTGGATAATATTTCAC 59.342 37.037 0.00 0.00 0.00 3.18
4111 5130 4.941263 CCAATTTTAGATCAACGACCTGGA 59.059 41.667 0.00 0.00 0.00 3.86
4136 5155 2.997315 CCAGCCCTCCACGAGTCA 60.997 66.667 0.00 0.00 0.00 3.41
4148 5167 1.210478 TCATTGACTTAGCCTCCAGCC 59.790 52.381 0.00 0.00 45.47 4.85
4149 5168 2.093235 AGTCATTGACTTAGCCTCCAGC 60.093 50.000 13.61 0.00 40.28 4.85
4150 5169 3.196469 TGAGTCATTGACTTAGCCTCCAG 59.804 47.826 19.88 0.00 43.53 3.86
4151 5170 3.173151 TGAGTCATTGACTTAGCCTCCA 58.827 45.455 19.88 9.03 43.53 3.86
4152 5171 3.791245 CTGAGTCATTGACTTAGCCTCC 58.209 50.000 21.36 8.57 43.53 4.30
4182 5201 1.226831 GTCACTGCTCTAGGCGCTC 60.227 63.158 7.64 0.00 45.43 5.03
4184 5203 2.580867 CGTCACTGCTCTAGGCGC 60.581 66.667 0.00 0.00 45.43 6.53
4186 5205 1.153745 CACCGTCACTGCTCTAGGC 60.154 63.158 0.00 0.00 42.22 3.93
4187 5206 1.153745 GCACCGTCACTGCTCTAGG 60.154 63.158 0.00 0.00 0.00 3.02
4188 5207 0.244994 AAGCACCGTCACTGCTCTAG 59.755 55.000 0.00 0.00 44.45 2.43
4189 5208 0.038251 CAAGCACCGTCACTGCTCTA 60.038 55.000 0.00 0.00 44.45 2.43
4191 5210 2.320587 CCAAGCACCGTCACTGCTC 61.321 63.158 0.00 0.00 44.45 4.26
4193 5212 3.357079 CCCAAGCACCGTCACTGC 61.357 66.667 0.00 0.00 34.63 4.40
4194 5213 3.357079 GCCCAAGCACCGTCACTG 61.357 66.667 0.00 0.00 39.53 3.66
4195 5214 4.643387 GGCCCAAGCACCGTCACT 62.643 66.667 0.00 0.00 42.56 3.41
4196 5215 4.947147 TGGCCCAAGCACCGTCAC 62.947 66.667 0.00 0.00 42.56 3.67
4197 5216 3.723097 TTTGGCCCAAGCACCGTCA 62.723 57.895 0.00 0.00 42.56 4.35
4200 5219 3.989787 GGTTTGGCCCAAGCACCG 61.990 66.667 12.62 0.00 42.56 4.94
4201 5220 3.989787 CGGTTTGGCCCAAGCACC 61.990 66.667 17.88 9.78 42.56 5.01
4202 5221 1.862602 CTACGGTTTGGCCCAAGCAC 61.863 60.000 17.88 1.01 42.56 4.40
4203 5222 1.602323 CTACGGTTTGGCCCAAGCA 60.602 57.895 17.88 0.00 42.56 3.91
4237 5256 2.044551 CCTCTTGGCCCAAGCTCC 60.045 66.667 19.00 0.00 40.84 4.70
4248 5267 0.815734 CAGCCCATTTGCTCCTCTTG 59.184 55.000 0.00 0.00 40.32 3.02
4251 5270 2.768492 CGCAGCCCATTTGCTCCTC 61.768 63.158 0.00 0.00 40.32 3.71
4268 5293 0.527817 CTACTGCTTTAGGTCGCCCG 60.528 60.000 0.00 0.00 35.12 6.13
4290 5315 1.755783 CCTCCAGCCCATTTGCTCC 60.756 63.158 0.00 0.00 40.32 4.70
4291 5316 1.755783 CCCTCCAGCCCATTTGCTC 60.756 63.158 0.00 0.00 40.32 4.26
4292 5317 2.361771 CCCTCCAGCCCATTTGCT 59.638 61.111 0.00 0.00 44.00 3.91
4293 5318 3.464494 GCCCTCCAGCCCATTTGC 61.464 66.667 0.00 0.00 0.00 3.68
4294 5319 3.142838 CGCCCTCCAGCCCATTTG 61.143 66.667 0.00 0.00 0.00 2.32
4295 5320 4.447342 CCGCCCTCCAGCCCATTT 62.447 66.667 0.00 0.00 0.00 2.32
4300 5325 3.714487 TTTATGCCGCCCTCCAGCC 62.714 63.158 0.00 0.00 0.00 4.85
4301 5326 2.124320 TTTATGCCGCCCTCCAGC 60.124 61.111 0.00 0.00 0.00 4.85
4302 5327 2.189499 GCTTTATGCCGCCCTCCAG 61.189 63.158 0.00 0.00 35.15 3.86
4303 5328 2.124320 GCTTTATGCCGCCCTCCA 60.124 61.111 0.00 0.00 35.15 3.86
4304 5329 2.124320 TGCTTTATGCCGCCCTCC 60.124 61.111 0.00 0.00 42.00 4.30
4305 5330 2.189499 CCTGCTTTATGCCGCCCTC 61.189 63.158 0.00 0.00 42.00 4.30
4306 5331 2.124151 CCTGCTTTATGCCGCCCT 60.124 61.111 0.00 0.00 42.00 5.19
4307 5332 3.904479 GCCTGCTTTATGCCGCCC 61.904 66.667 0.00 0.00 42.00 6.13
4308 5333 1.948721 AAAGCCTGCTTTATGCCGCC 61.949 55.000 15.09 0.00 43.58 6.13
4309 5334 0.803380 CAAAGCCTGCTTTATGCCGC 60.803 55.000 16.12 0.00 43.56 6.53
4310 5335 0.179129 CCAAAGCCTGCTTTATGCCG 60.179 55.000 16.12 4.65 43.56 5.69
4311 5336 0.460811 GCCAAAGCCTGCTTTATGCC 60.461 55.000 16.12 2.84 43.56 4.40
4312 5337 0.533951 AGCCAAAGCCTGCTTTATGC 59.466 50.000 21.38 21.38 43.56 3.14
4313 5338 5.972107 ATATAGCCAAAGCCTGCTTTATG 57.028 39.130 16.12 11.64 43.56 1.90
4314 5339 6.550854 TGAAATATAGCCAAAGCCTGCTTTAT 59.449 34.615 16.12 9.27 43.56 1.40
4315 5340 5.890985 TGAAATATAGCCAAAGCCTGCTTTA 59.109 36.000 16.12 2.32 43.56 1.85
4316 5341 4.711355 TGAAATATAGCCAAAGCCTGCTTT 59.289 37.500 11.20 11.20 45.98 3.51
4317 5342 4.098501 GTGAAATATAGCCAAAGCCTGCTT 59.901 41.667 0.00 0.00 41.25 3.91
4318 5343 3.633986 GTGAAATATAGCCAAAGCCTGCT 59.366 43.478 0.00 0.00 41.25 4.24
4319 5344 3.633986 AGTGAAATATAGCCAAAGCCTGC 59.366 43.478 0.00 0.00 41.25 4.85
4320 5345 7.148573 CGTATAGTGAAATATAGCCAAAGCCTG 60.149 40.741 0.00 0.00 41.25 4.85
4321 5346 6.874134 CGTATAGTGAAATATAGCCAAAGCCT 59.126 38.462 0.00 0.00 41.25 4.58
4322 5347 6.649557 ACGTATAGTGAAATATAGCCAAAGCC 59.350 38.462 0.00 0.00 41.25 4.35
4323 5348 7.653767 ACGTATAGTGAAATATAGCCAAAGC 57.346 36.000 0.00 0.00 40.32 3.51
4324 5349 9.136952 GGTACGTATAGTGAAATATAGCCAAAG 57.863 37.037 0.00 0.00 0.00 2.77
4325 5350 8.863086 AGGTACGTATAGTGAAATATAGCCAAA 58.137 33.333 0.00 0.00 0.00 3.28
4326 5351 8.413309 AGGTACGTATAGTGAAATATAGCCAA 57.587 34.615 0.00 0.00 0.00 4.52
4327 5352 9.690913 ATAGGTACGTATAGTGAAATATAGCCA 57.309 33.333 6.29 0.00 0.00 4.75
4333 5358 8.806146 GGGGAAATAGGTACGTATAGTGAAATA 58.194 37.037 8.43 0.00 0.00 1.40
4334 5359 7.511714 AGGGGAAATAGGTACGTATAGTGAAAT 59.488 37.037 8.43 0.00 0.00 2.17
4335 5360 6.840705 AGGGGAAATAGGTACGTATAGTGAAA 59.159 38.462 8.43 0.00 0.00 2.69
4336 5361 6.376248 AGGGGAAATAGGTACGTATAGTGAA 58.624 40.000 8.43 0.00 0.00 3.18
4337 5362 5.957132 AGGGGAAATAGGTACGTATAGTGA 58.043 41.667 8.43 0.00 0.00 3.41
4338 5363 6.376581 CCTAGGGGAAATAGGTACGTATAGTG 59.623 46.154 8.43 0.00 35.94 2.74
4339 5364 6.488715 CCTAGGGGAAATAGGTACGTATAGT 58.511 44.000 8.43 0.65 35.94 2.12
4360 5385 1.689258 GGTACCCTAGGCGAAACCCTA 60.689 57.143 2.05 0.00 40.58 3.53
4361 5386 0.979709 GGTACCCTAGGCGAAACCCT 60.980 60.000 2.05 0.00 40.58 4.34
4362 5387 1.524002 GGTACCCTAGGCGAAACCC 59.476 63.158 2.05 0.00 40.58 4.11
4391 5416 2.046314 ACTCCGGTGGAATTGCCG 60.046 61.111 8.63 0.13 46.80 5.69
4392 5417 1.749258 GGACTCCGGTGGAATTGCC 60.749 63.158 8.63 0.00 37.10 4.52
4393 5418 1.002624 TGGACTCCGGTGGAATTGC 60.003 57.895 8.63 0.00 0.00 3.56
4394 5419 0.676782 GGTGGACTCCGGTGGAATTG 60.677 60.000 8.63 0.00 0.00 2.32
4395 5420 1.131303 TGGTGGACTCCGGTGGAATT 61.131 55.000 8.63 0.00 0.00 2.17
4396 5421 0.914417 ATGGTGGACTCCGGTGGAAT 60.914 55.000 8.63 0.00 0.00 3.01
4397 5422 1.131303 AATGGTGGACTCCGGTGGAA 61.131 55.000 8.63 0.00 0.00 3.53
4398 5423 1.131303 AAATGGTGGACTCCGGTGGA 61.131 55.000 8.63 0.00 0.00 4.02
4399 5424 0.251165 AAAATGGTGGACTCCGGTGG 60.251 55.000 8.63 2.00 0.00 4.61
4400 5425 1.539827 GAAAAATGGTGGACTCCGGTG 59.460 52.381 0.00 0.00 0.00 4.94
4401 5426 1.546998 GGAAAAATGGTGGACTCCGGT 60.547 52.381 0.00 0.00 0.00 5.28
4402 5427 1.173913 GGAAAAATGGTGGACTCCGG 58.826 55.000 0.00 0.00 0.00 5.14
4403 5428 1.812571 CAGGAAAAATGGTGGACTCCG 59.187 52.381 0.00 0.00 0.00 4.63
4404 5429 1.546029 GCAGGAAAAATGGTGGACTCC 59.454 52.381 0.00 0.00 0.00 3.85
4405 5430 2.229784 CAGCAGGAAAAATGGTGGACTC 59.770 50.000 0.00 0.00 41.36 3.36
4406 5431 2.242043 CAGCAGGAAAAATGGTGGACT 58.758 47.619 0.00 0.00 41.36 3.85
4407 5432 2.730550 CAGCAGGAAAAATGGTGGAC 57.269 50.000 0.00 0.00 41.36 4.02
4411 5436 2.955660 TCGAAACAGCAGGAAAAATGGT 59.044 40.909 0.00 0.00 0.00 3.55
4412 5437 3.308530 GTCGAAACAGCAGGAAAAATGG 58.691 45.455 0.00 0.00 0.00 3.16
4413 5438 3.308530 GGTCGAAACAGCAGGAAAAATG 58.691 45.455 0.00 0.00 0.00 2.32
4414 5439 2.031157 CGGTCGAAACAGCAGGAAAAAT 60.031 45.455 0.00 0.00 0.00 1.82
4415 5440 1.332375 CGGTCGAAACAGCAGGAAAAA 59.668 47.619 0.00 0.00 0.00 1.94
4416 5441 0.941542 CGGTCGAAACAGCAGGAAAA 59.058 50.000 0.00 0.00 0.00 2.29
4417 5442 0.882927 CCGGTCGAAACAGCAGGAAA 60.883 55.000 0.00 0.00 0.00 3.13
4418 5443 1.301401 CCGGTCGAAACAGCAGGAA 60.301 57.895 0.00 0.00 0.00 3.36
4419 5444 2.154798 CTCCGGTCGAAACAGCAGGA 62.155 60.000 0.00 0.00 0.00 3.86
4420 5445 1.738099 CTCCGGTCGAAACAGCAGG 60.738 63.158 0.00 0.00 0.00 4.85
4421 5446 2.383527 GCTCCGGTCGAAACAGCAG 61.384 63.158 0.00 0.00 0.00 4.24
4422 5447 2.357034 GCTCCGGTCGAAACAGCA 60.357 61.111 0.00 0.00 0.00 4.41
4423 5448 3.119096 GGCTCCGGTCGAAACAGC 61.119 66.667 0.00 0.00 0.00 4.40
4424 5449 2.809601 CGGCTCCGGTCGAAACAG 60.810 66.667 0.00 0.00 44.06 3.16
4445 5470 3.484547 GTTTACTGCCCGACGCCG 61.485 66.667 0.00 0.00 36.24 6.46
4446 5471 2.229690 TAGGTTTACTGCCCGACGCC 62.230 60.000 0.00 0.00 36.24 5.68
4447 5472 0.179092 ATAGGTTTACTGCCCGACGC 60.179 55.000 0.00 0.00 38.31 5.19
4448 5473 1.407979 AGATAGGTTTACTGCCCGACG 59.592 52.381 0.00 0.00 0.00 5.12
4449 5474 2.822764 CAGATAGGTTTACTGCCCGAC 58.177 52.381 0.00 0.00 0.00 4.79
4455 5480 3.802948 AGACCGCAGATAGGTTTACTG 57.197 47.619 0.00 0.00 43.01 2.74
4456 5481 3.118738 CCAAGACCGCAGATAGGTTTACT 60.119 47.826 0.00 0.00 43.01 2.24
4457 5482 3.195661 CCAAGACCGCAGATAGGTTTAC 58.804 50.000 0.00 0.00 43.01 2.01
4458 5483 2.419574 GCCAAGACCGCAGATAGGTTTA 60.420 50.000 0.00 0.00 43.01 2.01
4459 5484 1.679032 GCCAAGACCGCAGATAGGTTT 60.679 52.381 0.00 0.00 43.01 3.27
4460 5485 0.107654 GCCAAGACCGCAGATAGGTT 60.108 55.000 0.00 0.00 43.01 3.50
4461 5486 1.264749 TGCCAAGACCGCAGATAGGT 61.265 55.000 0.00 0.00 46.16 3.08
4462 5487 0.811616 GTGCCAAGACCGCAGATAGG 60.812 60.000 0.00 0.00 36.78 2.57
4463 5488 1.148157 CGTGCCAAGACCGCAGATAG 61.148 60.000 0.00 0.00 36.78 2.08
4464 5489 1.153647 CGTGCCAAGACCGCAGATA 60.154 57.895 0.00 0.00 36.78 1.98
4465 5490 2.434884 CGTGCCAAGACCGCAGAT 60.435 61.111 0.00 0.00 36.78 2.90
4482 5507 4.036804 TTCCGCCATGTTGCACGC 62.037 61.111 0.00 0.00 0.00 5.34
4483 5508 2.126888 GTTCCGCCATGTTGCACG 60.127 61.111 0.00 0.00 0.00 5.34
4484 5509 2.258286 GGTTCCGCCATGTTGCAC 59.742 61.111 0.00 0.00 37.17 4.57
4485 5510 2.203408 TGGTTCCGCCATGTTGCA 60.203 55.556 0.00 0.00 43.61 4.08
4493 5518 0.109919 GAATTGACGTTGGTTCCGCC 60.110 55.000 0.00 0.00 37.90 6.13
4494 5519 0.589223 TGAATTGACGTTGGTTCCGC 59.411 50.000 0.00 0.00 0.00 5.54
4495 5520 2.350388 CCTTGAATTGACGTTGGTTCCG 60.350 50.000 0.00 0.00 0.00 4.30
4496 5521 2.607038 GCCTTGAATTGACGTTGGTTCC 60.607 50.000 0.00 0.00 0.00 3.62
4497 5522 2.661594 GCCTTGAATTGACGTTGGTTC 58.338 47.619 0.00 0.00 0.00 3.62
4498 5523 1.001815 CGCCTTGAATTGACGTTGGTT 60.002 47.619 0.00 0.00 0.00 3.67
4499 5524 0.591170 CGCCTTGAATTGACGTTGGT 59.409 50.000 0.00 0.00 0.00 3.67
4500 5525 0.871722 TCGCCTTGAATTGACGTTGG 59.128 50.000 0.00 0.00 0.00 3.77
4501 5526 1.135972 CCTCGCCTTGAATTGACGTTG 60.136 52.381 0.00 0.00 0.00 4.10
4502 5527 1.156736 CCTCGCCTTGAATTGACGTT 58.843 50.000 0.00 0.00 0.00 3.99
4503 5528 0.673644 CCCTCGCCTTGAATTGACGT 60.674 55.000 0.00 0.00 0.00 4.34
4504 5529 0.391130 TCCCTCGCCTTGAATTGACG 60.391 55.000 0.00 0.00 0.00 4.35
4505 5530 1.373570 CTCCCTCGCCTTGAATTGAC 58.626 55.000 0.00 0.00 0.00 3.18
4506 5531 0.253044 CCTCCCTCGCCTTGAATTGA 59.747 55.000 0.00 0.00 0.00 2.57
4507 5532 0.749454 CCCTCCCTCGCCTTGAATTG 60.749 60.000 0.00 0.00 0.00 2.32
4508 5533 1.609783 CCCTCCCTCGCCTTGAATT 59.390 57.895 0.00 0.00 0.00 2.17
4509 5534 3.049080 GCCCTCCCTCGCCTTGAAT 62.049 63.158 0.00 0.00 0.00 2.57
4510 5535 3.717294 GCCCTCCCTCGCCTTGAA 61.717 66.667 0.00 0.00 0.00 2.69
4512 5537 4.479993 CTGCCCTCCCTCGCCTTG 62.480 72.222 0.00 0.00 0.00 3.61
4518 5543 4.095400 TCCCTCCTGCCCTCCCTC 62.095 72.222 0.00 0.00 0.00 4.30
4519 5544 4.101077 CTCCCTCCTGCCCTCCCT 62.101 72.222 0.00 0.00 0.00 4.20
4520 5545 4.095400 TCTCCCTCCTGCCCTCCC 62.095 72.222 0.00 0.00 0.00 4.30
4521 5546 2.445654 CTCTCCCTCCTGCCCTCC 60.446 72.222 0.00 0.00 0.00 4.30
4522 5547 1.457455 CTCTCTCCCTCCTGCCCTC 60.457 68.421 0.00 0.00 0.00 4.30
4523 5548 2.695597 CTCTCTCCCTCCTGCCCT 59.304 66.667 0.00 0.00 0.00 5.19
4524 5549 2.445654 CCTCTCTCCCTCCTGCCC 60.446 72.222 0.00 0.00 0.00 5.36
4525 5550 2.445654 CCCTCTCTCCCTCCTGCC 60.446 72.222 0.00 0.00 0.00 4.85
4526 5551 1.457455 CTCCCTCTCTCCCTCCTGC 60.457 68.421 0.00 0.00 0.00 4.85
4527 5552 1.232792 CCTCCCTCTCTCCCTCCTG 59.767 68.421 0.00 0.00 0.00 3.86
4528 5553 0.998945 CTCCTCCCTCTCTCCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
4529 5554 0.996762 TCTCCTCCCTCTCTCCCTCC 60.997 65.000 0.00 0.00 0.00 4.30
4530 5555 0.478507 CTCTCCTCCCTCTCTCCCTC 59.521 65.000 0.00 0.00 0.00 4.30
4531 5556 0.998945 CCTCTCCTCCCTCTCTCCCT 60.999 65.000 0.00 0.00 0.00 4.20
4532 5557 0.996762 TCCTCTCCTCCCTCTCTCCC 60.997 65.000 0.00 0.00 0.00 4.30
4533 5558 0.185175 GTCCTCTCCTCCCTCTCTCC 59.815 65.000 0.00 0.00 0.00 3.71
4534 5559 0.923358 TGTCCTCTCCTCCCTCTCTC 59.077 60.000 0.00 0.00 0.00 3.20
4535 5560 0.926293 CTGTCCTCTCCTCCCTCTCT 59.074 60.000 0.00 0.00 0.00 3.10
4536 5561 0.923358 TCTGTCCTCTCCTCCCTCTC 59.077 60.000 0.00 0.00 0.00 3.20
4537 5562 0.926293 CTCTGTCCTCTCCTCCCTCT 59.074 60.000 0.00 0.00 0.00 3.69
4538 5563 0.923358 TCTCTGTCCTCTCCTCCCTC 59.077 60.000 0.00 0.00 0.00 4.30
4539 5564 1.619298 ATCTCTGTCCTCTCCTCCCT 58.381 55.000 0.00 0.00 0.00 4.20
4540 5565 2.038659 CAATCTCTGTCCTCTCCTCCC 58.961 57.143 0.00 0.00 0.00 4.30
4541 5566 2.038659 CCAATCTCTGTCCTCTCCTCC 58.961 57.143 0.00 0.00 0.00 4.30
4542 5567 3.025322 TCCAATCTCTGTCCTCTCCTC 57.975 52.381 0.00 0.00 0.00 3.71
4543 5568 3.575805 GATCCAATCTCTGTCCTCTCCT 58.424 50.000 0.00 0.00 0.00 3.69
4544 5569 2.295909 CGATCCAATCTCTGTCCTCTCC 59.704 54.545 0.00 0.00 0.00 3.71
4545 5570 2.955660 ACGATCCAATCTCTGTCCTCTC 59.044 50.000 0.00 0.00 0.00 3.20
4546 5571 2.692557 CACGATCCAATCTCTGTCCTCT 59.307 50.000 0.00 0.00 0.00 3.69
4547 5572 2.223923 CCACGATCCAATCTCTGTCCTC 60.224 54.545 0.00 0.00 0.00 3.71
4548 5573 1.759445 CCACGATCCAATCTCTGTCCT 59.241 52.381 0.00 0.00 0.00 3.85
4549 5574 1.482593 ACCACGATCCAATCTCTGTCC 59.517 52.381 0.00 0.00 0.00 4.02
4550 5575 2.482142 GGACCACGATCCAATCTCTGTC 60.482 54.545 0.00 0.00 38.77 3.51
4551 5576 1.482593 GGACCACGATCCAATCTCTGT 59.517 52.381 0.00 0.00 38.77 3.41
4552 5577 1.759445 AGGACCACGATCCAATCTCTG 59.241 52.381 0.00 0.00 41.73 3.35
4553 5578 2.166907 AGGACCACGATCCAATCTCT 57.833 50.000 0.00 0.00 41.73 3.10
4554 5579 2.990066 AAGGACCACGATCCAATCTC 57.010 50.000 0.00 0.00 41.73 2.75
4555 5580 2.103263 GCTAAGGACCACGATCCAATCT 59.897 50.000 0.00 0.00 41.73 2.40
4556 5581 2.484889 GCTAAGGACCACGATCCAATC 58.515 52.381 0.00 0.00 41.73 2.67
4557 5582 1.202533 CGCTAAGGACCACGATCCAAT 60.203 52.381 0.00 0.23 41.73 3.16
4558 5583 0.174845 CGCTAAGGACCACGATCCAA 59.825 55.000 0.00 0.00 41.73 3.53
4559 5584 0.681887 TCGCTAAGGACCACGATCCA 60.682 55.000 0.00 0.00 41.73 3.41
4560 5585 0.030908 CTCGCTAAGGACCACGATCC 59.969 60.000 0.00 0.00 39.28 3.36
4561 5586 0.595310 GCTCGCTAAGGACCACGATC 60.595 60.000 0.00 0.00 33.53 3.69
4562 5587 1.437986 GCTCGCTAAGGACCACGAT 59.562 57.895 0.00 0.00 33.53 3.73
4563 5588 2.882876 GCTCGCTAAGGACCACGA 59.117 61.111 0.00 0.00 0.00 4.35
4564 5589 2.579787 CGCTCGCTAAGGACCACG 60.580 66.667 0.00 0.00 0.00 4.94
4565 5590 1.226717 CTCGCTCGCTAAGGACCAC 60.227 63.158 0.00 0.00 0.00 4.16
4566 5591 2.415608 CCTCGCTCGCTAAGGACCA 61.416 63.158 0.00 0.00 31.44 4.02
4567 5592 2.413765 CCTCGCTCGCTAAGGACC 59.586 66.667 2.13 0.00 31.44 4.46
4568 5593 2.278923 GCCTCGCTCGCTAAGGAC 60.279 66.667 10.31 0.81 31.44 3.85
4569 5594 3.889044 CGCCTCGCTCGCTAAGGA 61.889 66.667 10.31 0.00 31.44 3.36
4570 5595 3.815569 CTCGCCTCGCTCGCTAAGG 62.816 68.421 3.61 3.61 0.00 2.69
4571 5596 2.352915 CTCGCCTCGCTCGCTAAG 60.353 66.667 0.00 0.00 0.00 2.18
4572 5597 3.889044 CCTCGCCTCGCTCGCTAA 61.889 66.667 0.00 0.00 0.00 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.