Multiple sequence alignment - TraesCS3D01G317100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G317100 chr3D 100.000 5744 0 0 1 5744 430058195 430063938 0.000000e+00 10608.0
1 TraesCS3D01G317100 chr3D 89.028 2880 265 25 2873 5744 253506936 253504100 0.000000e+00 3520.0
2 TraesCS3D01G317100 chr3D 97.611 293 7 0 579 871 430053600 430053892 2.390000e-138 503.0
3 TraesCS3D01G317100 chr3D 100.000 114 0 0 872 985 430053480 430053593 1.620000e-50 211.0
4 TraesCS3D01G317100 chr5D 89.666 3290 300 12 1156 4431 30536431 30533168 0.000000e+00 4156.0
5 TraesCS3D01G317100 chr5D 95.886 1750 68 4 2372 4117 55583020 55581271 0.000000e+00 2830.0
6 TraesCS3D01G317100 chr5D 95.902 1586 65 0 4159 5744 55563807 55562222 0.000000e+00 2569.0
7 TraesCS3D01G317100 chr5D 90.386 1321 124 3 4426 5744 30532468 30531149 0.000000e+00 1733.0
8 TraesCS3D01G317100 chr6A 86.857 2701 314 19 1175 3867 145248019 145250686 0.000000e+00 2983.0
9 TraesCS3D01G317100 chr6A 88.097 1865 189 21 3889 5744 145250750 145252590 0.000000e+00 2183.0
10 TraesCS3D01G317100 chr6B 87.495 2335 265 18 3416 5744 268251256 268253569 0.000000e+00 2669.0
11 TraesCS3D01G317100 chr6B 84.183 2295 333 15 1258 3546 243267402 243265132 0.000000e+00 2200.0
12 TraesCS3D01G317100 chr6B 90.738 799 68 5 4949 5744 538970685 538969890 0.000000e+00 1061.0
13 TraesCS3D01G317100 chr6B 89.183 453 42 5 421 871 715819271 715818824 5.030000e-155 558.0
14 TraesCS3D01G317100 chr6B 90.068 292 26 3 93 382 715819557 715819267 5.430000e-100 375.0
15 TraesCS3D01G317100 chr6B 87.458 295 31 4 579 871 715824217 715823927 9.220000e-88 335.0
16 TraesCS3D01G317100 chr6B 95.402 87 4 0 1 87 715819679 715819593 7.760000e-29 139.0
17 TraesCS3D01G317100 chr6D 85.927 2288 292 15 1266 3546 86895530 86897794 0.000000e+00 2414.0
18 TraesCS3D01G317100 chr6D 85.439 1765 220 19 3887 5645 86898101 86899834 0.000000e+00 1801.0
19 TraesCS3D01G317100 chr7B 82.908 2662 380 38 1175 3819 136620169 136622772 0.000000e+00 2326.0
20 TraesCS3D01G317100 chr7B 83.485 1211 168 20 3889 5090 136622884 136624071 0.000000e+00 1099.0
21 TraesCS3D01G317100 chr7B 88.515 653 72 3 5094 5744 136744658 136745309 0.000000e+00 787.0
22 TraesCS3D01G317100 chr7B 84.439 437 63 5 1275 1708 130579602 130579168 5.320000e-115 425.0
23 TraesCS3D01G317100 chr7B 92.000 50 4 0 1156 1205 556808157 556808206 2.870000e-08 71.3
24 TraesCS3D01G317100 chr5B 85.184 2288 306 19 1248 3527 268530407 268532669 0.000000e+00 2316.0
25 TraesCS3D01G317100 chr5B 84.298 1866 250 23 3887 5744 268533011 268534841 0.000000e+00 1783.0
26 TraesCS3D01G317100 chr2D 86.127 1867 218 27 3888 5744 274416115 274414280 0.000000e+00 1975.0
27 TraesCS3D01G317100 chr2D 84.720 1551 228 6 2080 3628 274425621 274424078 0.000000e+00 1543.0
28 TraesCS3D01G317100 chr2D 83.599 878 96 20 1170 2042 274426448 274425614 0.000000e+00 780.0
29 TraesCS3D01G317100 chr2A 81.344 1667 282 21 2217 3867 226492177 226490524 0.000000e+00 1328.0
30 TraesCS3D01G317100 chr2A 84.211 456 71 1 1274 1728 537412687 537413142 5.280000e-120 442.0
31 TraesCS3D01G317100 chr4B 91.927 545 42 2 85 629 106051486 106050944 0.000000e+00 761.0
32 TraesCS3D01G317100 chr4B 90.857 175 14 2 698 871 106056078 106055905 3.460000e-57 233.0
33 TraesCS3D01G317100 chr4B 95.714 140 6 0 732 871 106050645 106050506 5.790000e-55 226.0
34 TraesCS3D01G317100 chr1B 92.099 443 35 0 85 527 570647794 570648236 4.890000e-175 625.0
35 TraesCS3D01G317100 chr1B 88.328 317 26 8 559 871 570648555 570648864 2.530000e-98 370.0
36 TraesCS3D01G317100 chr1B 96.552 87 3 0 1 87 570647677 570647763 1.670000e-30 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G317100 chr3D 430058195 430063938 5743 False 10608.000000 10608 100.000000 1 5744 1 chr3D.!!$F1 5743
1 TraesCS3D01G317100 chr3D 253504100 253506936 2836 True 3520.000000 3520 89.028000 2873 5744 1 chr3D.!!$R1 2871
2 TraesCS3D01G317100 chr5D 30531149 30536431 5282 True 2944.500000 4156 90.026000 1156 5744 2 chr5D.!!$R3 4588
3 TraesCS3D01G317100 chr5D 55581271 55583020 1749 True 2830.000000 2830 95.886000 2372 4117 1 chr5D.!!$R2 1745
4 TraesCS3D01G317100 chr5D 55562222 55563807 1585 True 2569.000000 2569 95.902000 4159 5744 1 chr5D.!!$R1 1585
5 TraesCS3D01G317100 chr6A 145248019 145252590 4571 False 2583.000000 2983 87.477000 1175 5744 2 chr6A.!!$F1 4569
6 TraesCS3D01G317100 chr6B 268251256 268253569 2313 False 2669.000000 2669 87.495000 3416 5744 1 chr6B.!!$F1 2328
7 TraesCS3D01G317100 chr6B 243265132 243267402 2270 True 2200.000000 2200 84.183000 1258 3546 1 chr6B.!!$R1 2288
8 TraesCS3D01G317100 chr6B 538969890 538970685 795 True 1061.000000 1061 90.738000 4949 5744 1 chr6B.!!$R2 795
9 TraesCS3D01G317100 chr6B 715818824 715819679 855 True 357.333333 558 91.551000 1 871 3 chr6B.!!$R4 870
10 TraesCS3D01G317100 chr6D 86895530 86899834 4304 False 2107.500000 2414 85.683000 1266 5645 2 chr6D.!!$F1 4379
11 TraesCS3D01G317100 chr7B 136620169 136624071 3902 False 1712.500000 2326 83.196500 1175 5090 2 chr7B.!!$F3 3915
12 TraesCS3D01G317100 chr7B 136744658 136745309 651 False 787.000000 787 88.515000 5094 5744 1 chr7B.!!$F1 650
13 TraesCS3D01G317100 chr5B 268530407 268534841 4434 False 2049.500000 2316 84.741000 1248 5744 2 chr5B.!!$F1 4496
14 TraesCS3D01G317100 chr2D 274414280 274416115 1835 True 1975.000000 1975 86.127000 3888 5744 1 chr2D.!!$R1 1856
15 TraesCS3D01G317100 chr2D 274424078 274426448 2370 True 1161.500000 1543 84.159500 1170 3628 2 chr2D.!!$R2 2458
16 TraesCS3D01G317100 chr2A 226490524 226492177 1653 True 1328.000000 1328 81.344000 2217 3867 1 chr2A.!!$R1 1650
17 TraesCS3D01G317100 chr4B 106050506 106051486 980 True 493.500000 761 93.820500 85 871 2 chr4B.!!$R2 786
18 TraesCS3D01G317100 chr1B 570647677 570648864 1187 False 380.000000 625 92.326333 1 871 3 chr1B.!!$F1 870

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
677 1029 0.196118 ACCAGAGAGGGAAGGGGAAA 59.804 55.0 0.00 0.0 43.89 3.13 F
1109 1656 0.167908 TCATTGTTGATTGACGCGCC 59.832 50.0 5.73 0.0 0.00 6.53 F
1827 2402 0.108424 GATCTGTTGCTGCTCGTCCT 60.108 55.0 0.00 0.0 0.00 3.85 F
2970 3546 0.398318 AGTCTTGGACTTGCCCTGTC 59.602 55.0 0.00 0.0 40.28 3.51 F
3446 4032 0.041833 TAGTTCTGCCTGCTCCTCCT 59.958 55.0 0.00 0.0 0.00 3.69 F
3592 4178 0.615331 TCTCTTCCGCAGCCTCAAAT 59.385 50.0 0.00 0.0 0.00 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1799 2374 0.036952 AGCAACAGATCTGACCGGTG 60.037 55.000 29.27 17.23 0.00 4.94 R
2631 3207 0.784778 GAAAATCTCTATCGGCCGCG 59.215 55.000 23.51 11.63 0.00 6.46 R
3442 4028 0.109342 AACAGGTGCAACTGGAGGAG 59.891 55.000 33.95 9.92 42.75 3.69 R
4386 5076 0.251297 TCCTTTGGGTGTGAGCATGG 60.251 55.000 0.00 0.00 0.00 3.66 R
4419 5109 0.967380 CAGTTTCCACCATGGGAGCC 60.967 60.000 18.09 0.00 38.32 4.70 R
4834 6233 1.884579 GCCATGGAGCATCACATTAGG 59.115 52.381 18.40 0.00 36.25 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
172 236 2.264794 GACTCCATGTCCGCCGTT 59.735 61.111 0.00 0.00 39.69 4.44
186 250 4.817063 CGTTTGGCGCGATGCTGG 62.817 66.667 12.10 0.00 45.43 4.85
211 275 2.041928 AGAGGAAGCAGGGGAGGG 59.958 66.667 0.00 0.00 0.00 4.30
227 291 2.031163 GGAGATCCCCCAATCGCG 59.969 66.667 0.00 0.00 0.00 5.87
265 329 3.626924 GGTGCCTCCACGTCCAGT 61.627 66.667 0.00 0.00 43.00 4.00
273 337 4.337060 CACGTCCAGTGTCGCGGA 62.337 66.667 6.13 0.00 45.51 5.54
276 340 4.338539 GTCCAGTGTCGCGGACGT 62.339 66.667 6.13 0.00 42.19 4.34
304 368 4.783621 GCCGCCTGCACCAGATGA 62.784 66.667 0.00 0.00 40.77 2.92
322 386 2.581354 GAGCGCAGATCACCCACT 59.419 61.111 11.47 0.00 45.47 4.00
347 411 3.695606 GCAGCTCCTCCACGGACA 61.696 66.667 0.00 0.00 36.69 4.02
376 440 1.133809 TAGGCTTCCACCCTTGCAGT 61.134 55.000 0.00 0.00 33.88 4.40
493 557 4.090057 GCCTTGCGTCGCCTTGTC 62.090 66.667 15.88 0.00 0.00 3.18
539 603 1.066430 CCAGATCGGAGGGAAAAACGA 60.066 52.381 0.00 0.00 39.85 3.85
594 945 1.135083 CACTTGTTACGCTCCGGATCT 60.135 52.381 3.57 0.00 0.00 2.75
597 948 4.023450 CACTTGTTACGCTCCGGATCTATA 60.023 45.833 3.57 0.00 0.00 1.31
629 980 3.788227 AGGTGGCTGTTTACAGAATCA 57.212 42.857 13.83 5.68 46.59 2.57
631 982 3.327757 AGGTGGCTGTTTACAGAATCAGA 59.672 43.478 13.83 0.00 46.59 3.27
633 984 4.319177 GTGGCTGTTTACAGAATCAGAGT 58.681 43.478 13.83 0.00 46.59 3.24
644 995 9.436957 TTTACAGAATCAGAGTTACAAGAATCC 57.563 33.333 0.00 0.00 0.00 3.01
669 1021 1.927569 CGGAGGAGACCAGAGAGGGA 61.928 65.000 0.00 0.00 43.89 4.20
671 1023 1.687996 GGAGGAGACCAGAGAGGGAAG 60.688 61.905 0.00 0.00 43.89 3.46
675 1027 1.156322 AGACCAGAGAGGGAAGGGGA 61.156 60.000 0.00 0.00 43.89 4.81
676 1028 0.252742 GACCAGAGAGGGAAGGGGAA 60.253 60.000 0.00 0.00 43.89 3.97
677 1029 0.196118 ACCAGAGAGGGAAGGGGAAA 59.804 55.000 0.00 0.00 43.89 3.13
724 1076 0.325671 TTCTTCGATGCCCCTCTCCT 60.326 55.000 0.00 0.00 0.00 3.69
734 1281 0.621082 CCCCTCTCCTGAAAACCCTC 59.379 60.000 0.00 0.00 0.00 4.30
748 1295 0.979709 ACCCTCGCCCTACTTAACCC 60.980 60.000 0.00 0.00 0.00 4.11
811 1358 3.466791 CTCCGAATGCGATGGGCCT 62.467 63.158 4.53 0.00 42.61 5.19
871 1418 0.763652 TGGTACTTGGGCCGTAACAA 59.236 50.000 6.83 0.00 32.04 2.83
872 1419 1.142465 TGGTACTTGGGCCGTAACAAA 59.858 47.619 6.83 0.00 32.04 2.83
873 1420 2.228925 GGTACTTGGGCCGTAACAAAA 58.771 47.619 0.00 0.00 0.00 2.44
874 1421 2.821378 GGTACTTGGGCCGTAACAAAAT 59.179 45.455 0.00 0.00 0.00 1.82
875 1422 3.366577 GGTACTTGGGCCGTAACAAAATG 60.367 47.826 0.00 0.00 0.00 2.32
876 1423 2.312390 ACTTGGGCCGTAACAAAATGT 58.688 42.857 0.00 0.00 0.00 2.71
877 1424 3.488363 ACTTGGGCCGTAACAAAATGTA 58.512 40.909 0.00 0.00 0.00 2.29
878 1425 3.504520 ACTTGGGCCGTAACAAAATGTAG 59.495 43.478 0.00 0.00 0.00 2.74
879 1426 3.143211 TGGGCCGTAACAAAATGTAGT 57.857 42.857 0.00 0.00 0.00 2.73
880 1427 2.814919 TGGGCCGTAACAAAATGTAGTG 59.185 45.455 0.00 0.00 0.00 2.74
881 1428 2.414957 GGGCCGTAACAAAATGTAGTGC 60.415 50.000 0.00 0.00 0.00 4.40
882 1429 2.501881 GCCGTAACAAAATGTAGTGCG 58.498 47.619 0.00 0.00 0.00 5.34
883 1430 2.096119 GCCGTAACAAAATGTAGTGCGT 60.096 45.455 0.00 0.00 0.00 5.24
884 1431 3.607542 GCCGTAACAAAATGTAGTGCGTT 60.608 43.478 0.00 0.00 0.00 4.84
885 1432 4.145997 CCGTAACAAAATGTAGTGCGTTC 58.854 43.478 0.00 0.00 0.00 3.95
886 1433 4.084223 CCGTAACAAAATGTAGTGCGTTCT 60.084 41.667 0.00 0.00 0.00 3.01
887 1434 5.118971 CCGTAACAAAATGTAGTGCGTTCTA 59.881 40.000 0.00 0.00 0.00 2.10
888 1435 6.346758 CCGTAACAAAATGTAGTGCGTTCTAA 60.347 38.462 0.00 0.00 0.00 2.10
889 1436 7.231607 CGTAACAAAATGTAGTGCGTTCTAAT 58.768 34.615 0.00 0.00 0.00 1.73
890 1437 7.742963 CGTAACAAAATGTAGTGCGTTCTAATT 59.257 33.333 0.00 0.00 0.00 1.40
891 1438 9.389570 GTAACAAAATGTAGTGCGTTCTAATTT 57.610 29.630 0.00 0.00 0.00 1.82
897 1444 8.614994 AATGTAGTGCGTTCTAATTTATTTGC 57.385 30.769 0.00 0.00 0.00 3.68
898 1445 7.372451 TGTAGTGCGTTCTAATTTATTTGCT 57.628 32.000 0.00 0.00 0.00 3.91
899 1446 7.812648 TGTAGTGCGTTCTAATTTATTTGCTT 58.187 30.769 0.00 0.00 0.00 3.91
900 1447 8.293867 TGTAGTGCGTTCTAATTTATTTGCTTT 58.706 29.630 0.00 0.00 0.00 3.51
901 1448 9.124807 GTAGTGCGTTCTAATTTATTTGCTTTT 57.875 29.630 0.00 0.00 0.00 2.27
903 1450 9.855021 AGTGCGTTCTAATTTATTTGCTTTTAT 57.145 25.926 0.00 0.00 0.00 1.40
905 1452 9.296400 TGCGTTCTAATTTATTTGCTTTTATCC 57.704 29.630 0.00 0.00 0.00 2.59
906 1453 9.516314 GCGTTCTAATTTATTTGCTTTTATCCT 57.484 29.630 0.00 0.00 0.00 3.24
918 1465 7.630242 TTGCTTTTATCCTATGTTTGAGGAG 57.370 36.000 0.00 0.00 46.27 3.69
919 1466 6.122277 TGCTTTTATCCTATGTTTGAGGAGG 58.878 40.000 0.00 0.00 46.27 4.30
920 1467 6.069673 TGCTTTTATCCTATGTTTGAGGAGGA 60.070 38.462 0.00 0.00 46.27 3.71
921 1468 6.484977 GCTTTTATCCTATGTTTGAGGAGGAG 59.515 42.308 0.00 0.00 46.27 3.69
922 1469 7.635971 GCTTTTATCCTATGTTTGAGGAGGAGA 60.636 40.741 0.00 0.00 46.27 3.71
923 1470 7.749377 TTTATCCTATGTTTGAGGAGGAGAA 57.251 36.000 0.00 0.00 46.27 2.87
924 1471 5.885449 ATCCTATGTTTGAGGAGGAGAAG 57.115 43.478 0.00 0.00 46.27 2.85
925 1472 4.947883 TCCTATGTTTGAGGAGGAGAAGA 58.052 43.478 0.00 0.00 38.22 2.87
926 1473 5.533112 TCCTATGTTTGAGGAGGAGAAGAT 58.467 41.667 0.00 0.00 38.22 2.40
927 1474 5.600484 TCCTATGTTTGAGGAGGAGAAGATC 59.400 44.000 0.00 0.00 38.22 2.75
928 1475 5.602145 CCTATGTTTGAGGAGGAGAAGATCT 59.398 44.000 0.00 0.00 35.99 2.75
929 1476 4.815533 TGTTTGAGGAGGAGAAGATCTG 57.184 45.455 0.00 0.00 0.00 2.90
930 1477 4.420206 TGTTTGAGGAGGAGAAGATCTGA 58.580 43.478 0.00 0.00 0.00 3.27
931 1478 5.028802 TGTTTGAGGAGGAGAAGATCTGAT 58.971 41.667 0.00 0.00 0.00 2.90
932 1479 5.128499 TGTTTGAGGAGGAGAAGATCTGATC 59.872 44.000 9.65 9.65 0.00 2.92
933 1480 4.812403 TGAGGAGGAGAAGATCTGATCT 57.188 45.455 14.31 14.31 42.61 2.75
934 1481 4.472496 TGAGGAGGAGAAGATCTGATCTG 58.528 47.826 20.20 0.00 40.13 2.90
935 1482 4.167697 TGAGGAGGAGAAGATCTGATCTGA 59.832 45.833 20.20 4.63 40.13 3.27
936 1483 4.733165 AGGAGGAGAAGATCTGATCTGAG 58.267 47.826 20.20 0.00 40.13 3.35
937 1484 3.256631 GGAGGAGAAGATCTGATCTGAGC 59.743 52.174 20.20 9.61 40.13 4.26
938 1485 3.890756 GAGGAGAAGATCTGATCTGAGCA 59.109 47.826 20.20 0.00 40.13 4.26
939 1486 4.288398 AGGAGAAGATCTGATCTGAGCAA 58.712 43.478 20.20 0.00 40.13 3.91
940 1487 4.903049 AGGAGAAGATCTGATCTGAGCAAT 59.097 41.667 20.20 4.03 40.13 3.56
941 1488 5.011329 AGGAGAAGATCTGATCTGAGCAATC 59.989 44.000 20.20 12.65 40.13 2.67
942 1489 4.873817 AGAAGATCTGATCTGAGCAATCG 58.126 43.478 20.20 0.00 40.13 3.34
943 1490 4.341806 AGAAGATCTGATCTGAGCAATCGT 59.658 41.667 20.20 1.85 40.13 3.73
944 1491 4.241590 AGATCTGATCTGAGCAATCGTC 57.758 45.455 18.93 5.10 38.44 4.20
945 1492 3.890756 AGATCTGATCTGAGCAATCGTCT 59.109 43.478 18.93 7.11 38.44 4.18
946 1493 3.706802 TCTGATCTGAGCAATCGTCTC 57.293 47.619 0.00 0.00 0.00 3.36
947 1494 2.360483 TCTGATCTGAGCAATCGTCTCC 59.640 50.000 0.00 0.00 0.00 3.71
948 1495 2.100418 CTGATCTGAGCAATCGTCTCCA 59.900 50.000 0.00 0.00 0.00 3.86
949 1496 2.697229 TGATCTGAGCAATCGTCTCCAT 59.303 45.455 0.00 0.00 0.00 3.41
950 1497 2.591571 TCTGAGCAATCGTCTCCATG 57.408 50.000 0.00 0.00 0.00 3.66
951 1498 2.102578 TCTGAGCAATCGTCTCCATGA 58.897 47.619 0.00 0.00 0.00 3.07
952 1499 2.100418 TCTGAGCAATCGTCTCCATGAG 59.900 50.000 0.00 0.00 0.00 2.90
953 1500 2.100418 CTGAGCAATCGTCTCCATGAGA 59.900 50.000 0.00 0.00 36.22 3.27
954 1501 2.100418 TGAGCAATCGTCTCCATGAGAG 59.900 50.000 0.00 0.00 39.53 3.20
955 1502 2.100584 GAGCAATCGTCTCCATGAGAGT 59.899 50.000 9.98 0.00 43.71 3.24
956 1503 3.291584 AGCAATCGTCTCCATGAGAGTA 58.708 45.455 9.98 0.92 43.71 2.59
957 1504 3.067461 AGCAATCGTCTCCATGAGAGTAC 59.933 47.826 9.98 0.00 43.71 2.73
958 1505 3.067461 GCAATCGTCTCCATGAGAGTACT 59.933 47.826 0.00 0.00 43.71 2.73
959 1506 4.605968 CAATCGTCTCCATGAGAGTACTG 58.394 47.826 0.00 0.00 43.71 2.74
960 1507 3.629142 TCGTCTCCATGAGAGTACTGA 57.371 47.619 0.00 0.00 43.71 3.41
961 1508 3.951663 TCGTCTCCATGAGAGTACTGAA 58.048 45.455 0.00 0.00 43.71 3.02
962 1509 3.942115 TCGTCTCCATGAGAGTACTGAAG 59.058 47.826 0.00 0.00 43.71 3.02
963 1510 3.488384 CGTCTCCATGAGAGTACTGAAGC 60.488 52.174 0.00 0.00 43.71 3.86
964 1511 3.699038 GTCTCCATGAGAGTACTGAAGCT 59.301 47.826 0.00 0.00 43.71 3.74
965 1512 3.698539 TCTCCATGAGAGTACTGAAGCTG 59.301 47.826 0.00 0.00 43.71 4.24
966 1513 3.435275 TCCATGAGAGTACTGAAGCTGT 58.565 45.455 0.00 0.00 0.00 4.40
967 1514 4.600062 TCCATGAGAGTACTGAAGCTGTA 58.400 43.478 0.00 0.00 0.00 2.74
968 1515 4.399618 TCCATGAGAGTACTGAAGCTGTAC 59.600 45.833 0.00 4.99 38.48 2.90
969 1516 4.346970 CATGAGAGTACTGAAGCTGTACG 58.653 47.826 0.00 0.00 41.46 3.67
970 1517 3.671716 TGAGAGTACTGAAGCTGTACGA 58.328 45.455 0.00 0.00 41.46 3.43
971 1518 3.685272 TGAGAGTACTGAAGCTGTACGAG 59.315 47.826 0.00 0.00 41.46 4.18
984 1531 5.485662 GCTGTACGAGCTTGGAATATTTT 57.514 39.130 5.79 0.00 45.21 1.82
985 1532 5.266242 GCTGTACGAGCTTGGAATATTTTG 58.734 41.667 5.79 0.00 45.21 2.44
986 1533 5.163754 GCTGTACGAGCTTGGAATATTTTGT 60.164 40.000 5.79 0.00 45.21 2.83
987 1534 6.417191 TGTACGAGCTTGGAATATTTTGTC 57.583 37.500 5.79 0.00 0.00 3.18
988 1535 5.935206 TGTACGAGCTTGGAATATTTTGTCA 59.065 36.000 5.79 0.00 0.00 3.58
989 1536 6.597672 TGTACGAGCTTGGAATATTTTGTCAT 59.402 34.615 5.79 0.00 0.00 3.06
990 1537 6.515272 ACGAGCTTGGAATATTTTGTCATT 57.485 33.333 5.79 0.00 0.00 2.57
991 1538 6.924111 ACGAGCTTGGAATATTTTGTCATTT 58.076 32.000 5.79 0.00 0.00 2.32
992 1539 7.029563 ACGAGCTTGGAATATTTTGTCATTTC 58.970 34.615 5.79 0.00 0.00 2.17
993 1540 7.094205 ACGAGCTTGGAATATTTTGTCATTTCT 60.094 33.333 5.79 0.00 0.00 2.52
994 1541 7.430502 CGAGCTTGGAATATTTTGTCATTTCTC 59.569 37.037 0.00 0.00 0.00 2.87
995 1542 8.358582 AGCTTGGAATATTTTGTCATTTCTCT 57.641 30.769 0.00 0.00 0.00 3.10
996 1543 8.248945 AGCTTGGAATATTTTGTCATTTCTCTG 58.751 33.333 0.00 0.00 0.00 3.35
997 1544 7.009907 GCTTGGAATATTTTGTCATTTCTCTGC 59.990 37.037 0.00 0.00 0.00 4.26
998 1545 7.465353 TGGAATATTTTGTCATTTCTCTGCA 57.535 32.000 0.00 0.00 0.00 4.41
999 1546 8.070034 TGGAATATTTTGTCATTTCTCTGCAT 57.930 30.769 0.00 0.00 0.00 3.96
1000 1547 8.192774 TGGAATATTTTGTCATTTCTCTGCATC 58.807 33.333 0.00 0.00 0.00 3.91
1001 1548 7.650903 GGAATATTTTGTCATTTCTCTGCATCC 59.349 37.037 0.00 0.00 0.00 3.51
1002 1549 5.988310 ATTTTGTCATTTCTCTGCATCCA 57.012 34.783 0.00 0.00 0.00 3.41
1003 1550 5.381174 TTTTGTCATTTCTCTGCATCCAG 57.619 39.130 0.00 0.00 40.54 3.86
1004 1551 3.986996 TGTCATTTCTCTGCATCCAGA 57.013 42.857 0.00 0.00 45.54 3.86
1005 1552 4.498894 TGTCATTTCTCTGCATCCAGAT 57.501 40.909 0.00 0.00 46.44 2.90
1006 1553 5.619132 TGTCATTTCTCTGCATCCAGATA 57.381 39.130 0.00 0.00 46.44 1.98
1007 1554 6.183810 TGTCATTTCTCTGCATCCAGATAT 57.816 37.500 0.00 0.00 46.44 1.63
1008 1555 5.995897 TGTCATTTCTCTGCATCCAGATATG 59.004 40.000 11.51 11.51 46.44 1.78
1016 1563 3.844577 GCATCCAGATATGCCAACATC 57.155 47.619 0.00 0.00 45.31 3.06
1017 1564 2.490903 GCATCCAGATATGCCAACATCC 59.509 50.000 0.00 0.00 45.31 3.51
1018 1565 2.957402 TCCAGATATGCCAACATCCC 57.043 50.000 0.00 0.00 37.74 3.85
1019 1566 2.134354 TCCAGATATGCCAACATCCCA 58.866 47.619 0.00 0.00 37.74 4.37
1020 1567 2.718062 TCCAGATATGCCAACATCCCAT 59.282 45.455 0.00 0.00 37.74 4.00
1021 1568 2.823747 CCAGATATGCCAACATCCCATG 59.176 50.000 0.00 0.00 37.74 3.66
1022 1569 2.823747 CAGATATGCCAACATCCCATGG 59.176 50.000 4.14 4.14 37.74 3.66
1026 1573 4.770540 CCAACATCCCATGGCACT 57.229 55.556 6.09 0.00 33.60 4.40
1027 1574 3.901087 CCAACATCCCATGGCACTA 57.099 52.632 6.09 0.00 33.60 2.74
1028 1575 1.683943 CCAACATCCCATGGCACTAG 58.316 55.000 6.09 0.00 33.60 2.57
1029 1576 1.064463 CCAACATCCCATGGCACTAGT 60.064 52.381 6.09 0.00 33.60 2.57
1030 1577 2.621407 CCAACATCCCATGGCACTAGTT 60.621 50.000 6.09 3.42 33.60 2.24
1031 1578 2.424601 CAACATCCCATGGCACTAGTTG 59.575 50.000 6.09 11.98 33.60 3.16
1032 1579 1.064463 ACATCCCATGGCACTAGTTGG 60.064 52.381 6.09 4.56 33.60 3.77
1033 1580 1.064463 CATCCCATGGCACTAGTTGGT 60.064 52.381 6.09 0.00 0.00 3.67
1034 1581 0.327924 TCCCATGGCACTAGTTGGTG 59.672 55.000 6.09 3.06 39.91 4.17
1035 1582 0.680921 CCCATGGCACTAGTTGGTGG 60.681 60.000 6.09 8.06 37.65 4.61
1039 1586 4.800554 GCACTAGTTGGTGGCACT 57.199 55.556 18.45 0.00 37.65 4.40
1040 1587 3.927555 GCACTAGTTGGTGGCACTA 57.072 52.632 18.45 8.99 37.65 2.74
1041 1588 2.178912 GCACTAGTTGGTGGCACTAA 57.821 50.000 18.45 15.60 37.65 2.24
1042 1589 1.804748 GCACTAGTTGGTGGCACTAAC 59.195 52.381 31.94 31.94 39.49 2.34
1043 1590 2.423577 CACTAGTTGGTGGCACTAACC 58.576 52.381 34.12 20.72 39.97 2.85
1044 1591 2.051692 ACTAGTTGGTGGCACTAACCA 58.948 47.619 34.12 24.47 46.01 3.67
1062 1609 2.313317 CCAATTATGGCAGCATCAGGT 58.687 47.619 0.00 0.00 40.58 4.00
1063 1610 2.295349 CCAATTATGGCAGCATCAGGTC 59.705 50.000 0.00 0.00 40.58 3.85
1064 1611 2.283145 ATTATGGCAGCATCAGGTCC 57.717 50.000 0.00 0.00 0.00 4.46
1065 1612 0.183492 TTATGGCAGCATCAGGTCCC 59.817 55.000 0.00 0.00 0.00 4.46
1066 1613 0.987613 TATGGCAGCATCAGGTCCCA 60.988 55.000 0.00 0.00 0.00 4.37
1067 1614 1.866483 ATGGCAGCATCAGGTCCCAA 61.866 55.000 0.00 0.00 0.00 4.12
1068 1615 1.304381 GGCAGCATCAGGTCCCAAA 60.304 57.895 0.00 0.00 0.00 3.28
1069 1616 0.685458 GGCAGCATCAGGTCCCAAAT 60.685 55.000 0.00 0.00 0.00 2.32
1070 1617 1.410083 GGCAGCATCAGGTCCCAAATA 60.410 52.381 0.00 0.00 0.00 1.40
1071 1618 2.378038 GCAGCATCAGGTCCCAAATAA 58.622 47.619 0.00 0.00 0.00 1.40
1072 1619 2.961062 GCAGCATCAGGTCCCAAATAAT 59.039 45.455 0.00 0.00 0.00 1.28
1073 1620 3.005155 GCAGCATCAGGTCCCAAATAATC 59.995 47.826 0.00 0.00 0.00 1.75
1074 1621 3.571401 CAGCATCAGGTCCCAAATAATCC 59.429 47.826 0.00 0.00 0.00 3.01
1075 1622 2.554032 GCATCAGGTCCCAAATAATCCG 59.446 50.000 0.00 0.00 0.00 4.18
1076 1623 2.341846 TCAGGTCCCAAATAATCCGC 57.658 50.000 0.00 0.00 0.00 5.54
1077 1624 1.133915 TCAGGTCCCAAATAATCCGCC 60.134 52.381 0.00 0.00 0.00 6.13
1078 1625 0.179029 AGGTCCCAAATAATCCGCCG 60.179 55.000 0.00 0.00 0.00 6.46
1079 1626 0.179040 GGTCCCAAATAATCCGCCGA 60.179 55.000 0.00 0.00 0.00 5.54
1080 1627 1.544759 GGTCCCAAATAATCCGCCGAT 60.545 52.381 0.00 0.00 0.00 4.18
1081 1628 1.535462 GTCCCAAATAATCCGCCGATG 59.465 52.381 0.00 0.00 0.00 3.84
1082 1629 1.418264 TCCCAAATAATCCGCCGATGA 59.582 47.619 0.00 0.00 0.00 2.92
1083 1630 1.806542 CCCAAATAATCCGCCGATGAG 59.193 52.381 0.00 0.00 0.00 2.90
1084 1631 2.494059 CCAAATAATCCGCCGATGAGT 58.506 47.619 0.00 0.00 0.00 3.41
1085 1632 2.878406 CCAAATAATCCGCCGATGAGTT 59.122 45.455 0.00 0.00 0.00 3.01
1086 1633 3.315191 CCAAATAATCCGCCGATGAGTTT 59.685 43.478 0.00 0.00 0.00 2.66
1087 1634 4.513692 CCAAATAATCCGCCGATGAGTTTA 59.486 41.667 0.00 0.00 0.00 2.01
1088 1635 5.440685 CAAATAATCCGCCGATGAGTTTAC 58.559 41.667 0.00 0.00 0.00 2.01
1089 1636 2.684001 AATCCGCCGATGAGTTTACA 57.316 45.000 0.00 0.00 0.00 2.41
1090 1637 2.910688 ATCCGCCGATGAGTTTACAT 57.089 45.000 0.00 0.00 0.00 2.29
1091 1638 2.218953 TCCGCCGATGAGTTTACATC 57.781 50.000 0.00 0.00 41.98 3.06
1092 1639 1.478916 TCCGCCGATGAGTTTACATCA 59.521 47.619 0.00 0.00 44.57 3.07
1093 1640 2.102420 TCCGCCGATGAGTTTACATCAT 59.898 45.455 0.00 0.00 44.57 2.45
1094 1641 2.872245 CCGCCGATGAGTTTACATCATT 59.128 45.455 0.00 0.00 44.57 2.57
1095 1642 3.303329 CCGCCGATGAGTTTACATCATTG 60.303 47.826 0.00 0.00 44.57 2.82
1096 1643 3.309682 CGCCGATGAGTTTACATCATTGT 59.690 43.478 0.00 0.00 44.57 2.71
1097 1644 4.201812 CGCCGATGAGTTTACATCATTGTT 60.202 41.667 0.00 0.00 44.57 2.83
1098 1645 5.030295 GCCGATGAGTTTACATCATTGTTG 58.970 41.667 0.00 0.00 44.57 3.33
1099 1646 5.163764 GCCGATGAGTTTACATCATTGTTGA 60.164 40.000 0.00 0.00 44.57 3.18
1100 1647 6.458751 GCCGATGAGTTTACATCATTGTTGAT 60.459 38.462 0.00 0.00 44.57 2.57
1101 1648 7.475015 CCGATGAGTTTACATCATTGTTGATT 58.525 34.615 0.00 0.00 44.57 2.57
1102 1649 7.430211 CCGATGAGTTTACATCATTGTTGATTG 59.570 37.037 0.00 0.00 44.57 2.67
1103 1650 8.177013 CGATGAGTTTACATCATTGTTGATTGA 58.823 33.333 0.00 0.00 44.57 2.57
1104 1651 9.282247 GATGAGTTTACATCATTGTTGATTGAC 57.718 33.333 0.00 0.00 44.00 3.18
1105 1652 7.297391 TGAGTTTACATCATTGTTGATTGACG 58.703 34.615 1.79 0.00 40.70 4.35
1106 1653 6.086222 AGTTTACATCATTGTTGATTGACGC 58.914 36.000 1.79 0.00 40.70 5.19
1107 1654 3.121559 ACATCATTGTTGATTGACGCG 57.878 42.857 3.53 3.53 40.70 6.01
1108 1655 1.841944 CATCATTGTTGATTGACGCGC 59.158 47.619 5.73 0.00 40.70 6.86
1109 1656 0.167908 TCATTGTTGATTGACGCGCC 59.832 50.000 5.73 0.00 0.00 6.53
1110 1657 0.168788 CATTGTTGATTGACGCGCCT 59.831 50.000 5.73 0.00 0.00 5.52
1111 1658 0.447801 ATTGTTGATTGACGCGCCTC 59.552 50.000 5.73 0.00 0.00 4.70
1112 1659 0.882484 TTGTTGATTGACGCGCCTCA 60.882 50.000 5.73 4.90 0.00 3.86
1113 1660 1.132640 GTTGATTGACGCGCCTCAC 59.867 57.895 5.73 0.00 0.00 3.51
1114 1661 1.301322 TTGATTGACGCGCCTCACA 60.301 52.632 5.73 2.37 0.00 3.58
1115 1662 0.673333 TTGATTGACGCGCCTCACAT 60.673 50.000 5.73 6.25 0.00 3.21
1116 1663 0.673333 TGATTGACGCGCCTCACATT 60.673 50.000 5.73 0.00 0.00 2.71
1117 1664 0.247814 GATTGACGCGCCTCACATTG 60.248 55.000 5.73 0.00 0.00 2.82
1118 1665 1.647545 ATTGACGCGCCTCACATTGG 61.648 55.000 5.73 0.00 0.00 3.16
1119 1666 2.434185 GACGCGCCTCACATTGGA 60.434 61.111 5.73 0.00 0.00 3.53
1120 1667 2.031919 ACGCGCCTCACATTGGAA 59.968 55.556 5.73 0.00 0.00 3.53
1121 1668 1.573829 GACGCGCCTCACATTGGAAA 61.574 55.000 5.73 0.00 0.00 3.13
1122 1669 1.154225 CGCGCCTCACATTGGAAAC 60.154 57.895 0.00 0.00 0.00 2.78
1123 1670 1.851021 CGCGCCTCACATTGGAAACA 61.851 55.000 0.00 0.00 39.83 2.83
1142 1689 9.573166 TGGAAACAAGAATATCTTCTCTTTCAA 57.427 29.630 17.14 9.55 40.93 2.69
1153 1700 9.838339 ATATCTTCTCTTTCAAATTATCGTGGT 57.162 29.630 0.00 0.00 0.00 4.16
1154 1701 7.979444 TCTTCTCTTTCAAATTATCGTGGTT 57.021 32.000 0.00 0.00 0.00 3.67
1181 1728 3.953775 CTTGCCCTCACCGGTGGT 61.954 66.667 33.40 0.00 35.62 4.16
1211 1758 1.626356 CCGGTGTCCACATCCCTCAT 61.626 60.000 0.00 0.00 0.00 2.90
1212 1759 0.253044 CGGTGTCCACATCCCTCATT 59.747 55.000 0.00 0.00 0.00 2.57
1219 1766 0.680921 CACATCCCTCATTTGCCGGT 60.681 55.000 1.90 0.00 0.00 5.28
1235 1782 2.266627 GGTCGTCACTCCGGACACT 61.267 63.158 0.00 0.00 37.66 3.55
1300 1849 3.487372 TCTCTCTGACCTCAAGTTCGAA 58.513 45.455 0.00 0.00 0.00 3.71
1363 1912 5.106197 TGGTGTTCCAATCAATCATTTCGAG 60.106 40.000 0.00 0.00 41.25 4.04
1396 1945 3.987594 GGAATTCTTCCTGGTGGCT 57.012 52.632 5.23 0.00 46.57 4.75
1398 1947 0.813821 GAATTCTTCCTGGTGGCTGC 59.186 55.000 0.00 0.00 0.00 5.25
1492 2041 5.296780 TCATGCTTCTCGTTTCAAAGTTTCT 59.703 36.000 0.00 0.00 0.00 2.52
1663 2214 4.574527 CTGTATCAGCAAGAACTTGACG 57.425 45.455 17.19 7.75 42.93 4.35
1709 2260 4.543689 TCTGGTGATCGTAGGTCCTATTT 58.456 43.478 0.82 0.00 0.00 1.40
1716 2267 4.811969 TCGTAGGTCCTATTTTGAAGCA 57.188 40.909 0.82 0.00 0.00 3.91
1778 2329 3.278668 TCGTTCTCCGGTTAGATCTCT 57.721 47.619 0.00 0.00 37.11 3.10
1791 2366 0.965439 GATCTCTGGTCAGATCCCCG 59.035 60.000 0.75 0.00 42.15 5.73
1792 2367 0.470833 ATCTCTGGTCAGATCCCCGG 60.471 60.000 0.00 0.00 36.76 5.73
1793 2368 2.764128 TCTGGTCAGATCCCCGGC 60.764 66.667 0.00 0.00 31.41 6.13
1794 2369 3.866582 CTGGTCAGATCCCCGGCC 61.867 72.222 0.00 0.00 0.00 6.13
1798 2373 4.557149 TCAGATCCCCGGCCCGAT 62.557 66.667 3.71 0.00 0.00 4.18
1799 2374 4.008933 CAGATCCCCGGCCCGATC 62.009 72.222 3.71 13.66 36.03 3.69
1800 2375 4.557149 AGATCCCCGGCCCGATCA 62.557 66.667 20.20 0.00 37.87 2.92
1801 2376 4.315941 GATCCCCGGCCCGATCAC 62.316 72.222 3.71 0.00 35.88 3.06
1814 2389 0.741326 CGATCACCGGTCAGATCTGT 59.259 55.000 24.61 0.00 38.75 3.41
1827 2402 0.108424 GATCTGTTGCTGCTCGTCCT 60.108 55.000 0.00 0.00 0.00 3.85
1855 2431 2.806244 GTTTCTGAGCGCCTAACTCAAA 59.194 45.455 2.29 0.00 43.30 2.69
1863 2439 0.955919 GCCTAACTCAAACAGCGGCT 60.956 55.000 0.00 0.00 32.87 5.52
1877 2453 2.469516 CGGCTTCATTACACCCGGC 61.470 63.158 0.00 0.00 35.54 6.13
1878 2454 2.119029 GGCTTCATTACACCCGGCC 61.119 63.158 0.00 0.00 0.00 6.13
1879 2455 1.077716 GCTTCATTACACCCGGCCT 60.078 57.895 0.00 0.00 0.00 5.19
1880 2456 1.095807 GCTTCATTACACCCGGCCTC 61.096 60.000 0.00 0.00 0.00 4.70
1881 2457 0.541863 CTTCATTACACCCGGCCTCT 59.458 55.000 0.00 0.00 0.00 3.69
1882 2458 0.988832 TTCATTACACCCGGCCTCTT 59.011 50.000 0.00 0.00 0.00 2.85
1883 2459 0.988832 TCATTACACCCGGCCTCTTT 59.011 50.000 0.00 0.00 0.00 2.52
1884 2460 2.189676 TCATTACACCCGGCCTCTTTA 58.810 47.619 0.00 0.00 0.00 1.85
1885 2461 2.093341 TCATTACACCCGGCCTCTTTAC 60.093 50.000 0.00 0.00 0.00 2.01
1886 2462 1.350071 TTACACCCGGCCTCTTTACA 58.650 50.000 0.00 0.00 0.00 2.41
1887 2463 0.609662 TACACCCGGCCTCTTTACAC 59.390 55.000 0.00 0.00 0.00 2.90
1888 2464 1.373435 CACCCGGCCTCTTTACACA 59.627 57.895 0.00 0.00 0.00 3.72
1889 2465 0.953960 CACCCGGCCTCTTTACACAC 60.954 60.000 0.00 0.00 0.00 3.82
1890 2466 1.376812 CCCGGCCTCTTTACACACC 60.377 63.158 0.00 0.00 0.00 4.16
1891 2467 1.373435 CCGGCCTCTTTACACACCA 59.627 57.895 0.00 0.00 0.00 4.17
1944 2520 0.827507 GGGCGGGACTTACGGGTATA 60.828 60.000 0.00 0.00 0.00 1.47
1959 2535 3.637769 GGGTATACAAAATTCTGGGCCA 58.362 45.455 5.85 5.85 0.00 5.36
2024 2600 2.054021 TCTTGGTGTGGGTCATCTTCA 58.946 47.619 0.00 0.00 0.00 3.02
2109 2685 1.375013 TAGGTTTGGAGGCGCGAAC 60.375 57.895 12.10 3.48 0.00 3.95
2115 2691 4.430765 GGAGGCGCGAACTCCGAA 62.431 66.667 27.09 0.00 44.50 4.30
2255 2831 4.759693 TCAGTCAAATCAAGCAATTACCGT 59.240 37.500 0.00 0.00 0.00 4.83
2274 2850 1.141881 CGGTGCCTACTCGCATTCT 59.858 57.895 0.00 0.00 41.70 2.40
2370 2946 4.467084 GCGATGGCGACCTTCCCA 62.467 66.667 0.00 0.00 40.82 4.37
2507 3083 1.117150 GCAACAATCATCCCCATGCT 58.883 50.000 0.00 0.00 0.00 3.79
2627 3203 2.687935 GACAAGCTTTTGTGAGGGTTCA 59.312 45.455 0.00 0.00 34.90 3.18
2631 3207 3.084786 AGCTTTTGTGAGGGTTCATAGC 58.915 45.455 0.00 0.00 35.39 2.97
2727 3303 2.925966 ATGAGGGGCTGAATTGGAAA 57.074 45.000 0.00 0.00 0.00 3.13
2910 3486 4.630644 TGAAGCTCTCAAAGATGTTCCT 57.369 40.909 0.00 0.00 0.00 3.36
2916 3492 2.816087 TCTCAAAGATGTTCCTGCAAGC 59.184 45.455 0.00 0.00 0.00 4.01
2970 3546 0.398318 AGTCTTGGACTTGCCCTGTC 59.602 55.000 0.00 0.00 40.28 3.51
3040 3616 2.553904 CCAGTTCCTGAAGATGGCAACT 60.554 50.000 0.00 0.00 32.44 3.16
3163 3740 2.235650 CTGTCATTGAGGAAGCTCCAGA 59.764 50.000 5.21 0.00 39.61 3.86
3166 3743 2.909006 TCATTGAGGAAGCTCCAGAACT 59.091 45.455 5.21 0.00 39.61 3.01
3210 3787 0.844661 TTGGGGTCACTGGGCTATGT 60.845 55.000 0.00 0.00 0.00 2.29
3221 3807 2.532256 GGCTATGTCGCAGCAGCAG 61.532 63.158 0.82 0.00 40.95 4.24
3309 3895 3.211045 GAAGTTCAGGTTGTACAGCCAA 58.789 45.455 27.99 13.54 33.73 4.52
3344 3930 1.751351 GGGCTCACTTTATCTTTGGGC 59.249 52.381 0.00 0.00 35.88 5.36
3440 4026 1.229658 ACCCCTAGTTCTGCCTGCT 60.230 57.895 0.00 0.00 0.00 4.24
3441 4027 1.268283 ACCCCTAGTTCTGCCTGCTC 61.268 60.000 0.00 0.00 0.00 4.26
3442 4028 1.524482 CCCTAGTTCTGCCTGCTCC 59.476 63.158 0.00 0.00 0.00 4.70
3446 4032 0.041833 TAGTTCTGCCTGCTCCTCCT 59.958 55.000 0.00 0.00 0.00 3.69
3507 4093 0.630673 ACCCATTGAATAGCTGCCCA 59.369 50.000 0.00 0.00 0.00 5.36
3512 4098 4.401022 CCATTGAATAGCTGCCCATAGAA 58.599 43.478 0.00 0.00 0.00 2.10
3527 4113 4.272489 CCATAGAAGACTTGGCAATTCCA 58.728 43.478 13.27 0.00 44.85 3.53
3561 4147 3.734293 GCCTGCTCTTGAGAATGAAATGC 60.734 47.826 1.30 0.00 0.00 3.56
3581 4167 2.005451 CTGGTTGCTGAATCTCTTCCG 58.995 52.381 0.00 0.00 0.00 4.30
3592 4178 0.615331 TCTCTTCCGCAGCCTCAAAT 59.385 50.000 0.00 0.00 0.00 2.32
3664 4271 1.875514 TGTTGCTGCTGCTACTTTCAG 59.124 47.619 25.06 0.00 43.46 3.02
3690 4297 4.194640 TGTAGCTGAAATTGATGCTCCTC 58.805 43.478 0.00 0.00 37.02 3.71
3767 4375 1.517242 CAGAAGAGGTGCCTGTTGTC 58.483 55.000 5.30 0.00 29.30 3.18
3771 4379 1.185618 AGAGGTGCCTGTTGTCGCTA 61.186 55.000 0.00 0.00 0.00 4.26
3867 4477 1.254026 CAATATGGATGGCCCTGCTG 58.746 55.000 0.00 0.00 35.38 4.41
3972 4662 7.125391 TCCCTTATCCTATTTTCAATGCAAGT 58.875 34.615 0.00 0.00 0.00 3.16
4005 4695 6.571150 GCAAGGATATTCAATTACTGCCATCC 60.571 42.308 0.00 0.00 31.46 3.51
4101 4791 3.945921 GGGCCTCAACAGATAAAGTTACC 59.054 47.826 0.84 0.00 0.00 2.85
4131 4821 7.658525 ACCTATTGAATGGTGCAAATTCATA 57.341 32.000 20.80 14.30 42.15 2.15
4227 4917 4.072131 TCATTGAGGGTTCTGCAAGTAAC 58.928 43.478 0.00 0.00 33.76 2.50
4231 4921 2.552743 GAGGGTTCTGCAAGTAACCAAC 59.447 50.000 20.75 12.90 42.30 3.77
4386 5076 4.729918 CCACCTGCCAGCACCTCC 62.730 72.222 0.00 0.00 0.00 4.30
4410 5100 1.072331 GCTCACACCCAAAGGAAGAGA 59.928 52.381 0.00 0.00 36.73 3.10
4419 5109 6.717084 ACACCCAAAGGAAGAGAAAAGATAAG 59.283 38.462 0.00 0.00 36.73 1.73
4617 6012 2.305928 GACTGCTCTGAGGAGATGCTA 58.694 52.381 29.49 0.00 41.86 3.49
4724 6123 9.859152 ATTTCCTGCTTAAGATAGCTTTCTAAT 57.141 29.630 6.67 0.00 41.76 1.73
4778 6177 3.476552 CTGGGACTCTGTTGCACTTTTA 58.523 45.455 0.00 0.00 0.00 1.52
4828 6227 7.445096 TGAGAGACAATGCTTTTGTAATGAGAA 59.555 33.333 5.72 0.00 31.96 2.87
4834 6233 9.362539 ACAATGCTTTTGTAATGAGAATGAATC 57.637 29.630 4.11 0.00 0.00 2.52
4906 6306 1.360192 GCCCTGTGTTCTGTGCAAC 59.640 57.895 0.00 0.00 37.35 4.17
5010 6413 9.844257 GGAGGAATAGTACTAGTTACAGACTTA 57.156 37.037 8.85 0.00 39.86 2.24
5239 6642 0.906756 CCTCTGTGGGAGCTTCTGGA 60.907 60.000 0.00 0.00 40.57 3.86
5322 6726 9.948964 TGAGTTCTCTATTTCAATCAGATTTCA 57.051 29.630 0.00 0.00 0.00 2.69
5388 6792 2.443577 TTGCCAAGGTGCAGCCAA 60.444 55.556 13.29 6.75 43.21 4.52
5422 6826 2.592102 ACTGGTTCAGCAACATCCAT 57.408 45.000 0.00 0.00 34.37 3.41
5472 6876 7.496346 TCTTGGGAGACTTCAACTACATTAT 57.504 36.000 0.00 0.00 0.00 1.28
5479 6883 9.091220 GGAGACTTCAACTACATTATATACCCT 57.909 37.037 0.00 0.00 0.00 4.34
5494 6898 8.721133 TTATATACCCTCACAATAGAAGCAGA 57.279 34.615 0.00 0.00 0.00 4.26
5519 6924 3.134442 TGGGGGCAATTTTTCTGATATGC 59.866 43.478 0.00 0.00 0.00 3.14
5681 7086 5.011738 TCTCACTTTCCTAACACCCTAGTTG 59.988 44.000 0.00 0.00 33.07 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.600638 GGGGAAGTCACCGGGTAAG 59.399 63.158 6.32 0.00 0.00 2.34
24 25 2.284847 GGGGGAAGTCACCGGGTA 60.285 66.667 6.32 0.00 41.47 3.69
186 250 4.704833 TGCTTCCTCTGGCGGCAC 62.705 66.667 7.97 0.00 0.00 5.01
211 275 2.666526 GCGCGATTGGGGGATCTC 60.667 66.667 12.10 0.00 0.00 2.75
304 368 1.548357 AAGTGGGTGATCTGCGCTCT 61.548 55.000 9.73 0.00 0.00 4.09
347 411 0.752009 TGGAAGCCTACGATCGAGCT 60.752 55.000 24.34 22.09 37.10 4.09
385 449 2.806237 GACGAGATCCACCCGGTC 59.194 66.667 0.00 0.00 0.00 4.79
483 547 1.576356 GATCATCCAGACAAGGCGAC 58.424 55.000 0.00 0.00 0.00 5.19
493 557 2.138320 CGTTTCCCATCGATCATCCAG 58.862 52.381 0.00 0.00 0.00 3.86
539 603 3.138798 CCCTCACCGATCCGTCGT 61.139 66.667 0.00 0.00 46.25 4.34
551 615 2.260639 ATCAGAGCCTCTTTCCCTCA 57.739 50.000 0.00 0.00 0.00 3.86
594 945 5.958380 ACAGCCACCTATATTGCTAGCTATA 59.042 40.000 18.99 18.99 31.69 1.31
597 948 2.975489 ACAGCCACCTATATTGCTAGCT 59.025 45.455 17.23 0.00 31.69 3.32
616 967 9.778741 ATTCTTGTAACTCTGATTCTGTAAACA 57.221 29.630 0.00 0.00 0.00 2.83
629 980 3.068307 CGATCCCGGATTCTTGTAACTCT 59.932 47.826 0.73 0.00 0.00 3.24
631 982 3.454371 CGATCCCGGATTCTTGTAACT 57.546 47.619 0.73 0.00 0.00 2.24
644 995 2.123854 TGGTCTCCTCCGATCCCG 60.124 66.667 0.00 0.00 0.00 5.14
653 1005 0.338120 CCTTCCCTCTCTGGTCTCCT 59.662 60.000 0.00 0.00 0.00 3.69
654 1006 0.689412 CCCTTCCCTCTCTGGTCTCC 60.689 65.000 0.00 0.00 0.00 3.71
659 1011 1.372501 TTTTCCCCTTCCCTCTCTGG 58.627 55.000 0.00 0.00 0.00 3.86
676 1028 1.603739 GCGGTGGCTCTCCCTTTTT 60.604 57.895 0.00 0.00 35.83 1.94
677 1029 2.034221 GCGGTGGCTCTCCCTTTT 59.966 61.111 0.00 0.00 35.83 2.27
724 1076 1.061546 AAGTAGGGCGAGGGTTTTCA 58.938 50.000 0.00 0.00 0.00 2.69
734 1281 0.179081 GAGCAGGGTTAAGTAGGGCG 60.179 60.000 0.00 0.00 0.00 6.13
871 1418 9.072294 GCAAATAAATTAGAACGCACTACATTT 57.928 29.630 0.00 0.00 0.00 2.32
872 1419 8.458843 AGCAAATAAATTAGAACGCACTACATT 58.541 29.630 0.00 0.00 0.00 2.71
873 1420 7.985476 AGCAAATAAATTAGAACGCACTACAT 58.015 30.769 0.00 0.00 0.00 2.29
874 1421 7.372451 AGCAAATAAATTAGAACGCACTACA 57.628 32.000 0.00 0.00 0.00 2.74
875 1422 8.669394 AAAGCAAATAAATTAGAACGCACTAC 57.331 30.769 0.00 0.00 0.00 2.73
877 1424 9.855021 ATAAAAGCAAATAAATTAGAACGCACT 57.145 25.926 0.00 0.00 0.00 4.40
879 1426 9.296400 GGATAAAAGCAAATAAATTAGAACGCA 57.704 29.630 0.00 0.00 0.00 5.24
880 1427 9.516314 AGGATAAAAGCAAATAAATTAGAACGC 57.484 29.630 0.00 0.00 0.00 4.84
891 1438 9.693739 TCCTCAAACATAGGATAAAAGCAAATA 57.306 29.630 0.00 0.00 38.24 1.40
892 1439 8.593945 TCCTCAAACATAGGATAAAAGCAAAT 57.406 30.769 0.00 0.00 38.24 2.32
893 1440 7.122650 CCTCCTCAAACATAGGATAAAAGCAAA 59.877 37.037 0.00 0.00 42.25 3.68
894 1441 6.603201 CCTCCTCAAACATAGGATAAAAGCAA 59.397 38.462 0.00 0.00 42.25 3.91
895 1442 6.069673 TCCTCCTCAAACATAGGATAAAAGCA 60.070 38.462 0.00 0.00 42.25 3.91
896 1443 6.357367 TCCTCCTCAAACATAGGATAAAAGC 58.643 40.000 0.00 0.00 42.25 3.51
897 1444 7.796054 TCTCCTCCTCAAACATAGGATAAAAG 58.204 38.462 0.00 0.00 42.25 2.27
898 1445 7.749377 TCTCCTCCTCAAACATAGGATAAAA 57.251 36.000 0.00 0.00 42.25 1.52
899 1446 7.623677 TCTTCTCCTCCTCAAACATAGGATAAA 59.376 37.037 0.00 0.00 42.25 1.40
900 1447 7.132805 TCTTCTCCTCCTCAAACATAGGATAA 58.867 38.462 0.00 0.00 42.25 1.75
901 1448 6.683537 TCTTCTCCTCCTCAAACATAGGATA 58.316 40.000 0.00 0.00 42.25 2.59
902 1449 5.533112 TCTTCTCCTCCTCAAACATAGGAT 58.467 41.667 0.00 0.00 42.25 3.24
903 1450 4.947883 TCTTCTCCTCCTCAAACATAGGA 58.052 43.478 0.00 0.00 40.92 2.94
904 1451 5.602145 AGATCTTCTCCTCCTCAAACATAGG 59.398 44.000 0.00 0.00 35.26 2.57
905 1452 6.323482 TCAGATCTTCTCCTCCTCAAACATAG 59.677 42.308 0.00 0.00 0.00 2.23
906 1453 6.197903 TCAGATCTTCTCCTCCTCAAACATA 58.802 40.000 0.00 0.00 0.00 2.29
907 1454 5.028802 TCAGATCTTCTCCTCCTCAAACAT 58.971 41.667 0.00 0.00 0.00 2.71
908 1455 4.420206 TCAGATCTTCTCCTCCTCAAACA 58.580 43.478 0.00 0.00 0.00 2.83
909 1456 5.363580 AGATCAGATCTTCTCCTCCTCAAAC 59.636 44.000 7.15 0.00 35.76 2.93
910 1457 5.363292 CAGATCAGATCTTCTCCTCCTCAAA 59.637 44.000 10.51 0.00 37.58 2.69
911 1458 4.894705 CAGATCAGATCTTCTCCTCCTCAA 59.105 45.833 10.51 0.00 37.58 3.02
912 1459 4.167697 TCAGATCAGATCTTCTCCTCCTCA 59.832 45.833 10.51 0.00 37.58 3.86
913 1460 4.728772 TCAGATCAGATCTTCTCCTCCTC 58.271 47.826 10.51 0.00 37.58 3.71
914 1461 4.733165 CTCAGATCAGATCTTCTCCTCCT 58.267 47.826 10.51 0.00 37.58 3.69
915 1462 3.256631 GCTCAGATCAGATCTTCTCCTCC 59.743 52.174 10.51 0.00 37.58 4.30
916 1463 3.890756 TGCTCAGATCAGATCTTCTCCTC 59.109 47.826 10.51 0.00 37.58 3.71
917 1464 3.913509 TGCTCAGATCAGATCTTCTCCT 58.086 45.455 10.51 0.00 37.58 3.69
918 1465 4.669206 TTGCTCAGATCAGATCTTCTCC 57.331 45.455 10.51 0.87 37.58 3.71
919 1466 4.919168 CGATTGCTCAGATCAGATCTTCTC 59.081 45.833 10.51 3.31 37.58 2.87
920 1467 4.341806 ACGATTGCTCAGATCAGATCTTCT 59.658 41.667 10.51 0.00 37.58 2.85
921 1468 4.619973 ACGATTGCTCAGATCAGATCTTC 58.380 43.478 10.51 4.03 37.58 2.87
922 1469 4.341806 AGACGATTGCTCAGATCAGATCTT 59.658 41.667 10.51 0.00 37.58 2.40
923 1470 3.890756 AGACGATTGCTCAGATCAGATCT 59.109 43.478 7.15 7.15 41.15 2.75
924 1471 4.229096 GAGACGATTGCTCAGATCAGATC 58.771 47.826 1.64 1.64 32.67 2.75
925 1472 3.005684 GGAGACGATTGCTCAGATCAGAT 59.994 47.826 0.00 0.00 34.07 2.90
926 1473 2.360483 GGAGACGATTGCTCAGATCAGA 59.640 50.000 0.00 0.00 34.07 3.27
927 1474 2.100418 TGGAGACGATTGCTCAGATCAG 59.900 50.000 0.00 0.00 34.07 2.90
928 1475 2.102578 TGGAGACGATTGCTCAGATCA 58.897 47.619 0.00 0.00 34.07 2.92
929 1476 2.879002 TGGAGACGATTGCTCAGATC 57.121 50.000 0.00 0.00 34.07 2.75
930 1477 2.697229 TCATGGAGACGATTGCTCAGAT 59.303 45.455 0.00 0.00 34.07 2.90
931 1478 2.100418 CTCATGGAGACGATTGCTCAGA 59.900 50.000 0.00 0.00 34.07 3.27
932 1479 2.100418 TCTCATGGAGACGATTGCTCAG 59.900 50.000 0.00 0.00 33.35 3.35
933 1480 2.100418 CTCTCATGGAGACGATTGCTCA 59.900 50.000 5.53 0.00 44.45 4.26
934 1481 2.100584 ACTCTCATGGAGACGATTGCTC 59.899 50.000 15.51 0.00 44.45 4.26
935 1482 2.106566 ACTCTCATGGAGACGATTGCT 58.893 47.619 15.51 0.00 44.45 3.91
936 1483 2.593346 ACTCTCATGGAGACGATTGC 57.407 50.000 15.51 0.00 44.45 3.56
937 1484 4.336713 TCAGTACTCTCATGGAGACGATTG 59.663 45.833 15.51 8.73 44.45 2.67
938 1485 4.527944 TCAGTACTCTCATGGAGACGATT 58.472 43.478 15.51 0.00 44.45 3.34
939 1486 4.157849 TCAGTACTCTCATGGAGACGAT 57.842 45.455 15.51 0.00 44.45 3.73
940 1487 3.629142 TCAGTACTCTCATGGAGACGA 57.371 47.619 15.51 9.31 44.45 4.20
941 1488 3.488384 GCTTCAGTACTCTCATGGAGACG 60.488 52.174 15.51 4.90 44.45 4.18
942 1489 3.699038 AGCTTCAGTACTCTCATGGAGAC 59.301 47.826 15.51 10.15 44.45 3.36
943 1490 3.698539 CAGCTTCAGTACTCTCATGGAGA 59.301 47.826 15.51 6.48 44.45 3.71
944 1491 3.446873 ACAGCTTCAGTACTCTCATGGAG 59.553 47.826 9.01 9.01 46.87 3.86
945 1492 3.435275 ACAGCTTCAGTACTCTCATGGA 58.565 45.455 0.00 0.00 0.00 3.41
946 1493 3.883830 ACAGCTTCAGTACTCTCATGG 57.116 47.619 0.00 0.00 0.00 3.66
947 1494 4.095036 TCGTACAGCTTCAGTACTCTCATG 59.905 45.833 10.18 0.00 39.66 3.07
948 1495 4.262617 TCGTACAGCTTCAGTACTCTCAT 58.737 43.478 10.18 0.00 39.66 2.90
949 1496 3.671716 TCGTACAGCTTCAGTACTCTCA 58.328 45.455 10.18 0.00 39.66 3.27
950 1497 3.486209 GCTCGTACAGCTTCAGTACTCTC 60.486 52.174 10.18 0.00 45.83 3.20
951 1498 2.420722 GCTCGTACAGCTTCAGTACTCT 59.579 50.000 10.18 0.00 45.83 3.24
952 1499 2.788030 GCTCGTACAGCTTCAGTACTC 58.212 52.381 10.18 0.00 45.83 2.59
953 1500 2.923605 GCTCGTACAGCTTCAGTACT 57.076 50.000 10.18 0.00 45.83 2.73
963 1510 6.092122 TGACAAAATATTCCAAGCTCGTACAG 59.908 38.462 0.00 0.00 0.00 2.74
964 1511 5.935206 TGACAAAATATTCCAAGCTCGTACA 59.065 36.000 0.00 0.00 0.00 2.90
965 1512 6.417191 TGACAAAATATTCCAAGCTCGTAC 57.583 37.500 0.00 0.00 0.00 3.67
966 1513 7.624360 AATGACAAAATATTCCAAGCTCGTA 57.376 32.000 0.00 0.00 0.00 3.43
967 1514 6.515272 AATGACAAAATATTCCAAGCTCGT 57.485 33.333 0.00 0.00 0.00 4.18
968 1515 7.253422 AGAAATGACAAAATATTCCAAGCTCG 58.747 34.615 0.00 0.00 0.00 5.03
969 1516 8.465201 AGAGAAATGACAAAATATTCCAAGCTC 58.535 33.333 0.00 0.00 0.00 4.09
970 1517 8.248945 CAGAGAAATGACAAAATATTCCAAGCT 58.751 33.333 0.00 0.00 0.00 3.74
971 1518 7.009907 GCAGAGAAATGACAAAATATTCCAAGC 59.990 37.037 0.00 0.00 0.00 4.01
972 1519 8.030692 TGCAGAGAAATGACAAAATATTCCAAG 58.969 33.333 0.00 0.00 0.00 3.61
973 1520 7.894708 TGCAGAGAAATGACAAAATATTCCAA 58.105 30.769 0.00 0.00 0.00 3.53
974 1521 7.465353 TGCAGAGAAATGACAAAATATTCCA 57.535 32.000 0.00 0.00 0.00 3.53
975 1522 7.650903 GGATGCAGAGAAATGACAAAATATTCC 59.349 37.037 0.00 0.00 0.00 3.01
976 1523 8.192774 TGGATGCAGAGAAATGACAAAATATTC 58.807 33.333 0.00 0.00 0.00 1.75
977 1524 8.070034 TGGATGCAGAGAAATGACAAAATATT 57.930 30.769 0.00 0.00 0.00 1.28
978 1525 7.558807 TCTGGATGCAGAGAAATGACAAAATAT 59.441 33.333 13.58 0.00 0.00 1.28
979 1526 6.885918 TCTGGATGCAGAGAAATGACAAAATA 59.114 34.615 13.58 0.00 0.00 1.40
980 1527 5.713389 TCTGGATGCAGAGAAATGACAAAAT 59.287 36.000 13.58 0.00 0.00 1.82
981 1528 5.072055 TCTGGATGCAGAGAAATGACAAAA 58.928 37.500 13.58 0.00 0.00 2.44
982 1529 4.654915 TCTGGATGCAGAGAAATGACAAA 58.345 39.130 13.58 0.00 0.00 2.83
983 1530 4.290711 TCTGGATGCAGAGAAATGACAA 57.709 40.909 13.58 0.00 0.00 3.18
984 1531 3.986996 TCTGGATGCAGAGAAATGACA 57.013 42.857 13.58 0.00 0.00 3.58
985 1532 6.483385 CATATCTGGATGCAGAGAAATGAC 57.517 41.667 22.03 0.00 34.35 3.06
997 1544 3.087031 GGGATGTTGGCATATCTGGATG 58.913 50.000 10.76 0.00 35.07 3.51
998 1545 2.718062 TGGGATGTTGGCATATCTGGAT 59.282 45.455 10.76 0.00 35.07 3.41
999 1546 2.134354 TGGGATGTTGGCATATCTGGA 58.866 47.619 10.76 0.00 35.07 3.86
1000 1547 2.662535 TGGGATGTTGGCATATCTGG 57.337 50.000 10.76 0.00 35.07 3.86
1001 1548 2.823747 CCATGGGATGTTGGCATATCTG 59.176 50.000 2.85 3.77 35.07 2.90
1002 1549 3.165087 CCATGGGATGTTGGCATATCT 57.835 47.619 2.85 0.00 35.07 1.98
1009 1556 1.064463 ACTAGTGCCATGGGATGTTGG 60.064 52.381 15.13 5.59 36.03 3.77
1010 1557 2.424601 CAACTAGTGCCATGGGATGTTG 59.575 50.000 23.73 23.73 0.00 3.33
1011 1558 2.621407 CCAACTAGTGCCATGGGATGTT 60.621 50.000 15.13 14.12 0.00 2.71
1012 1559 1.064463 CCAACTAGTGCCATGGGATGT 60.064 52.381 15.13 8.70 0.00 3.06
1013 1560 1.064463 ACCAACTAGTGCCATGGGATG 60.064 52.381 15.13 5.27 37.26 3.51
1014 1561 1.064463 CACCAACTAGTGCCATGGGAT 60.064 52.381 15.13 3.65 37.26 3.85
1015 1562 0.327924 CACCAACTAGTGCCATGGGA 59.672 55.000 15.13 8.24 37.26 4.37
1016 1563 0.680921 CCACCAACTAGTGCCATGGG 60.681 60.000 15.13 0.00 37.26 4.00
1017 1564 1.315257 GCCACCAACTAGTGCCATGG 61.315 60.000 7.63 7.63 36.38 3.66
1018 1565 0.608856 TGCCACCAACTAGTGCCATG 60.609 55.000 0.00 0.00 36.38 3.66
1019 1566 0.609131 GTGCCACCAACTAGTGCCAT 60.609 55.000 0.00 0.00 36.38 4.40
1020 1567 1.228124 GTGCCACCAACTAGTGCCA 60.228 57.895 0.00 0.00 36.38 4.92
1021 1568 0.323629 TAGTGCCACCAACTAGTGCC 59.676 55.000 0.00 0.00 36.38 5.01
1022 1569 1.804748 GTTAGTGCCACCAACTAGTGC 59.195 52.381 0.00 0.00 36.38 4.40
1023 1570 2.224426 TGGTTAGTGCCACCAACTAGTG 60.224 50.000 6.13 0.00 41.58 2.74
1024 1571 2.051692 TGGTTAGTGCCACCAACTAGT 58.948 47.619 6.13 0.00 41.58 2.57
1025 1572 2.851263 TGGTTAGTGCCACCAACTAG 57.149 50.000 6.13 0.00 41.58 2.57
1030 1577 3.360867 CCATAATTGGTTAGTGCCACCA 58.639 45.455 0.00 0.00 42.90 4.17
1031 1578 2.100749 GCCATAATTGGTTAGTGCCACC 59.899 50.000 0.00 0.00 45.57 4.61
1032 1579 2.757868 TGCCATAATTGGTTAGTGCCAC 59.242 45.455 0.00 0.00 45.57 5.01
1033 1580 3.023119 CTGCCATAATTGGTTAGTGCCA 58.977 45.455 0.00 0.00 45.57 4.92
1034 1581 2.223805 GCTGCCATAATTGGTTAGTGCC 60.224 50.000 0.00 0.00 45.57 5.01
1035 1582 2.426738 TGCTGCCATAATTGGTTAGTGC 59.573 45.455 0.00 0.00 45.57 4.40
1036 1583 4.338964 TGATGCTGCCATAATTGGTTAGTG 59.661 41.667 0.00 0.00 45.57 2.74
1037 1584 4.535781 TGATGCTGCCATAATTGGTTAGT 58.464 39.130 0.00 0.00 45.57 2.24
1038 1585 4.022589 CCTGATGCTGCCATAATTGGTTAG 60.023 45.833 0.00 0.00 45.57 2.34
1039 1586 3.890756 CCTGATGCTGCCATAATTGGTTA 59.109 43.478 0.00 0.00 45.57 2.85
1040 1587 2.696707 CCTGATGCTGCCATAATTGGTT 59.303 45.455 0.00 0.00 45.57 3.67
1041 1588 2.313317 CCTGATGCTGCCATAATTGGT 58.687 47.619 0.00 0.00 45.57 3.67
1042 1589 2.295349 GACCTGATGCTGCCATAATTGG 59.705 50.000 0.00 0.00 46.66 3.16
1043 1590 2.295349 GGACCTGATGCTGCCATAATTG 59.705 50.000 0.00 0.00 0.00 2.32
1044 1591 2.590821 GGACCTGATGCTGCCATAATT 58.409 47.619 0.00 0.00 0.00 1.40
1045 1592 1.202976 GGGACCTGATGCTGCCATAAT 60.203 52.381 0.00 0.00 0.00 1.28
1046 1593 0.183492 GGGACCTGATGCTGCCATAA 59.817 55.000 0.00 0.00 0.00 1.90
1047 1594 0.987613 TGGGACCTGATGCTGCCATA 60.988 55.000 0.00 0.00 0.00 2.74
1048 1595 1.866483 TTGGGACCTGATGCTGCCAT 61.866 55.000 0.00 0.00 0.00 4.40
1049 1596 2.079088 TTTGGGACCTGATGCTGCCA 62.079 55.000 0.00 0.00 0.00 4.92
1050 1597 0.685458 ATTTGGGACCTGATGCTGCC 60.685 55.000 0.00 0.00 0.00 4.85
1051 1598 2.057137 TATTTGGGACCTGATGCTGC 57.943 50.000 0.00 0.00 0.00 5.25
1052 1599 3.571401 GGATTATTTGGGACCTGATGCTG 59.429 47.826 0.00 0.00 0.00 4.41
1053 1600 3.748668 CGGATTATTTGGGACCTGATGCT 60.749 47.826 0.00 0.00 0.00 3.79
1054 1601 2.554032 CGGATTATTTGGGACCTGATGC 59.446 50.000 0.00 0.00 0.00 3.91
1055 1602 2.554032 GCGGATTATTTGGGACCTGATG 59.446 50.000 0.00 0.00 0.00 3.07
1056 1603 2.489073 GGCGGATTATTTGGGACCTGAT 60.489 50.000 0.00 0.00 0.00 2.90
1057 1604 1.133915 GGCGGATTATTTGGGACCTGA 60.134 52.381 0.00 0.00 0.00 3.86
1058 1605 1.318576 GGCGGATTATTTGGGACCTG 58.681 55.000 0.00 0.00 0.00 4.00
1059 1606 0.179029 CGGCGGATTATTTGGGACCT 60.179 55.000 0.00 0.00 0.00 3.85
1060 1607 0.179040 TCGGCGGATTATTTGGGACC 60.179 55.000 7.21 0.00 0.00 4.46
1061 1608 1.535462 CATCGGCGGATTATTTGGGAC 59.465 52.381 7.21 0.00 0.00 4.46
1062 1609 1.418264 TCATCGGCGGATTATTTGGGA 59.582 47.619 7.21 0.00 0.00 4.37
1063 1610 1.806542 CTCATCGGCGGATTATTTGGG 59.193 52.381 7.21 0.00 0.00 4.12
1064 1611 2.494059 ACTCATCGGCGGATTATTTGG 58.506 47.619 7.21 0.00 0.00 3.28
1065 1612 4.552166 AAACTCATCGGCGGATTATTTG 57.448 40.909 7.21 0.00 0.00 2.32
1066 1613 5.120399 TGTAAACTCATCGGCGGATTATTT 58.880 37.500 7.21 7.91 0.00 1.40
1067 1614 4.699637 TGTAAACTCATCGGCGGATTATT 58.300 39.130 7.21 0.00 0.00 1.40
1068 1615 4.330944 TGTAAACTCATCGGCGGATTAT 57.669 40.909 7.21 0.00 0.00 1.28
1069 1616 3.804786 TGTAAACTCATCGGCGGATTA 57.195 42.857 7.21 0.00 0.00 1.75
1070 1617 2.684001 TGTAAACTCATCGGCGGATT 57.316 45.000 7.21 0.00 0.00 3.01
1071 1618 2.102420 TGATGTAAACTCATCGGCGGAT 59.898 45.455 7.21 0.04 44.82 4.18
1072 1619 1.478916 TGATGTAAACTCATCGGCGGA 59.521 47.619 7.21 0.00 44.82 5.54
1073 1620 1.934589 TGATGTAAACTCATCGGCGG 58.065 50.000 7.21 0.00 44.82 6.13
1074 1621 3.309682 ACAATGATGTAAACTCATCGGCG 59.690 43.478 0.00 0.00 44.82 6.46
1075 1622 4.882671 ACAATGATGTAAACTCATCGGC 57.117 40.909 0.00 0.00 44.82 5.54
1076 1623 6.421377 TCAACAATGATGTAAACTCATCGG 57.579 37.500 0.00 0.00 44.82 4.18
1077 1624 8.177013 TCAATCAACAATGATGTAAACTCATCG 58.823 33.333 0.00 0.00 45.60 3.84
1078 1625 9.282247 GTCAATCAACAATGATGTAAACTCATC 57.718 33.333 0.00 0.00 45.60 2.92
1079 1626 7.964559 CGTCAATCAACAATGATGTAAACTCAT 59.035 33.333 0.00 0.00 45.60 2.90
1080 1627 7.297391 CGTCAATCAACAATGATGTAAACTCA 58.703 34.615 0.00 0.00 45.60 3.41
1081 1628 6.249260 GCGTCAATCAACAATGATGTAAACTC 59.751 38.462 0.00 0.00 45.60 3.01
1082 1629 6.086222 GCGTCAATCAACAATGATGTAAACT 58.914 36.000 0.00 0.00 45.60 2.66
1083 1630 5.002468 CGCGTCAATCAACAATGATGTAAAC 59.998 40.000 0.00 0.00 45.60 2.01
1084 1631 5.085390 CGCGTCAATCAACAATGATGTAAA 58.915 37.500 0.00 0.00 45.60 2.01
1085 1632 4.646960 CGCGTCAATCAACAATGATGTAA 58.353 39.130 0.00 0.00 45.60 2.41
1086 1633 3.485051 GCGCGTCAATCAACAATGATGTA 60.485 43.478 8.43 0.00 45.60 2.29
1087 1634 2.728846 GCGCGTCAATCAACAATGATGT 60.729 45.455 8.43 0.00 45.60 3.06
1088 1635 1.841944 GCGCGTCAATCAACAATGATG 59.158 47.619 8.43 0.00 45.60 3.07
1090 1637 0.167908 GGCGCGTCAATCAACAATGA 59.832 50.000 5.47 0.00 40.57 2.57
1091 1638 0.168788 AGGCGCGTCAATCAACAATG 59.831 50.000 15.58 0.00 0.00 2.82
1092 1639 0.447801 GAGGCGCGTCAATCAACAAT 59.552 50.000 24.22 0.00 0.00 2.71
1093 1640 0.882484 TGAGGCGCGTCAATCAACAA 60.882 50.000 28.85 4.34 0.00 2.83
1094 1641 1.301322 TGAGGCGCGTCAATCAACA 60.301 52.632 28.85 5.80 0.00 3.33
1095 1642 1.132640 GTGAGGCGCGTCAATCAAC 59.867 57.895 31.98 16.86 0.00 3.18
1096 1643 0.673333 ATGTGAGGCGCGTCAATCAA 60.673 50.000 31.98 18.75 0.00 2.57
1097 1644 0.673333 AATGTGAGGCGCGTCAATCA 60.673 50.000 31.98 25.88 0.00 2.57
1098 1645 0.247814 CAATGTGAGGCGCGTCAATC 60.248 55.000 31.98 21.45 0.00 2.67
1099 1646 1.647545 CCAATGTGAGGCGCGTCAAT 61.648 55.000 31.98 22.98 0.00 2.57
1100 1647 2.324330 CCAATGTGAGGCGCGTCAA 61.324 57.895 31.98 21.93 0.00 3.18
1101 1648 2.723586 TTCCAATGTGAGGCGCGTCA 62.724 55.000 27.51 27.51 0.00 4.35
1102 1649 1.573829 TTTCCAATGTGAGGCGCGTC 61.574 55.000 22.60 22.60 0.00 5.19
1103 1650 1.599518 TTTCCAATGTGAGGCGCGT 60.600 52.632 8.43 0.27 0.00 6.01
1104 1651 1.154225 GTTTCCAATGTGAGGCGCG 60.154 57.895 0.00 0.00 0.00 6.86
1105 1652 0.313672 TTGTTTCCAATGTGAGGCGC 59.686 50.000 0.00 0.00 0.00 6.53
1106 1653 1.879380 TCTTGTTTCCAATGTGAGGCG 59.121 47.619 0.00 0.00 0.00 5.52
1107 1654 4.525912 ATTCTTGTTTCCAATGTGAGGC 57.474 40.909 0.00 0.00 0.00 4.70
1108 1655 7.636150 AGATATTCTTGTTTCCAATGTGAGG 57.364 36.000 0.00 0.00 0.00 3.86
1109 1656 8.954350 AGAAGATATTCTTGTTTCCAATGTGAG 58.046 33.333 0.00 0.00 36.73 3.51
1110 1657 8.868522 AGAAGATATTCTTGTTTCCAATGTGA 57.131 30.769 0.00 0.00 36.73 3.58
1111 1658 8.954350 AGAGAAGATATTCTTGTTTCCAATGTG 58.046 33.333 3.70 0.00 36.73 3.21
1112 1659 9.525826 AAGAGAAGATATTCTTGTTTCCAATGT 57.474 29.630 3.70 0.00 36.73 2.71
1115 1662 9.573166 TGAAAGAGAAGATATTCTTGTTTCCAA 57.427 29.630 22.99 11.86 36.73 3.53
1116 1663 9.573166 TTGAAAGAGAAGATATTCTTGTTTCCA 57.427 29.630 22.99 15.84 36.73 3.53
1127 1674 9.838339 ACCACGATAATTTGAAAGAGAAGATAT 57.162 29.630 0.00 0.00 0.00 1.63
1128 1675 9.667107 AACCACGATAATTTGAAAGAGAAGATA 57.333 29.630 0.00 0.00 0.00 1.98
1129 1676 8.454106 CAACCACGATAATTTGAAAGAGAAGAT 58.546 33.333 0.00 0.00 0.00 2.40
1130 1677 7.094805 CCAACCACGATAATTTGAAAGAGAAGA 60.095 37.037 0.00 0.00 0.00 2.87
1131 1678 7.023575 CCAACCACGATAATTTGAAAGAGAAG 58.976 38.462 0.00 0.00 0.00 2.85
1132 1679 6.569610 GCCAACCACGATAATTTGAAAGAGAA 60.570 38.462 0.00 0.00 0.00 2.87
1133 1680 5.106317 GCCAACCACGATAATTTGAAAGAGA 60.106 40.000 0.00 0.00 0.00 3.10
1134 1681 5.095490 GCCAACCACGATAATTTGAAAGAG 58.905 41.667 0.00 0.00 0.00 2.85
1135 1682 4.082463 GGCCAACCACGATAATTTGAAAGA 60.082 41.667 0.00 0.00 35.26 2.52
1136 1683 4.173256 GGCCAACCACGATAATTTGAAAG 58.827 43.478 0.00 0.00 35.26 2.62
1137 1684 3.574396 TGGCCAACCACGATAATTTGAAA 59.426 39.130 0.61 0.00 42.67 2.69
1138 1685 3.157881 TGGCCAACCACGATAATTTGAA 58.842 40.909 0.61 0.00 42.67 2.69
1139 1686 2.796557 TGGCCAACCACGATAATTTGA 58.203 42.857 0.61 0.00 42.67 2.69
1161 1708 3.175710 ACCGGTGAGGGCAAGGTT 61.176 61.111 6.12 0.00 46.96 3.50
1198 1745 0.394216 CGGCAAATGAGGGATGTGGA 60.394 55.000 0.00 0.00 0.00 4.02
1211 1758 2.029964 GGAGTGACGACCGGCAAA 59.970 61.111 0.00 0.00 33.39 3.68
1212 1759 4.351938 CGGAGTGACGACCGGCAA 62.352 66.667 14.27 0.00 44.59 4.52
1219 1766 2.265904 CCAGTGTCCGGAGTGACGA 61.266 63.158 3.06 0.00 38.11 4.20
1269 1818 0.814457 GTCAGAGAGAGCCATCACGT 59.186 55.000 0.00 0.00 0.00 4.49
1363 1912 1.632589 ATTCCTTGAGTTTGCCACCC 58.367 50.000 0.00 0.00 0.00 4.61
1396 1945 1.816835 AGTTTAGATCGAGTCACCGCA 59.183 47.619 0.00 0.00 0.00 5.69
1398 1947 4.235360 ACAAAGTTTAGATCGAGTCACCG 58.765 43.478 0.00 0.00 0.00 4.94
1492 2041 4.769345 AAAGGACCAATTTTGAAGGCAA 57.231 36.364 0.00 0.00 0.00 4.52
1663 2214 2.427506 GTTCACCACAGTCCATTCCTC 58.572 52.381 0.00 0.00 0.00 3.71
1709 2260 3.381272 CCTTGGAGTTTGAACTGCTTCAA 59.619 43.478 14.96 0.00 46.16 2.69
1716 2267 4.645136 GGAAAGAACCTTGGAGTTTGAACT 59.355 41.667 0.00 0.00 43.16 3.01
1795 2370 0.741326 ACAGATCTGACCGGTGATCG 59.259 55.000 29.27 19.59 42.62 3.69
1796 2371 2.544685 CAACAGATCTGACCGGTGATC 58.455 52.381 29.27 21.66 39.32 2.92
1797 2372 1.406069 GCAACAGATCTGACCGGTGAT 60.406 52.381 29.27 10.04 0.00 3.06
1798 2373 0.037326 GCAACAGATCTGACCGGTGA 60.037 55.000 29.27 0.65 0.00 4.02
1799 2374 0.036952 AGCAACAGATCTGACCGGTG 60.037 55.000 29.27 17.23 0.00 4.94
1800 2375 0.036952 CAGCAACAGATCTGACCGGT 60.037 55.000 29.27 6.92 32.26 5.28
1801 2376 1.364626 GCAGCAACAGATCTGACCGG 61.365 60.000 29.27 16.25 32.26 5.28
1802 2377 0.390866 AGCAGCAACAGATCTGACCG 60.391 55.000 29.27 16.39 32.26 4.79
1803 2378 1.367659 GAGCAGCAACAGATCTGACC 58.632 55.000 29.27 15.30 32.26 4.02
1804 2379 0.997932 CGAGCAGCAACAGATCTGAC 59.002 55.000 29.27 16.77 32.26 3.51
1805 2380 0.605083 ACGAGCAGCAACAGATCTGA 59.395 50.000 29.27 0.00 32.26 3.27
1806 2381 0.997932 GACGAGCAGCAACAGATCTG 59.002 55.000 21.37 21.37 0.00 2.90
1807 2382 0.108424 GGACGAGCAGCAACAGATCT 60.108 55.000 0.00 0.00 0.00 2.75
1808 2383 0.108424 AGGACGAGCAGCAACAGATC 60.108 55.000 0.00 0.00 0.00 2.75
1809 2384 0.108424 GAGGACGAGCAGCAACAGAT 60.108 55.000 0.00 0.00 0.00 2.90
1810 2385 1.181741 AGAGGACGAGCAGCAACAGA 61.182 55.000 0.00 0.00 0.00 3.41
1811 2386 0.320247 AAGAGGACGAGCAGCAACAG 60.320 55.000 0.00 0.00 0.00 3.16
1812 2387 0.106708 AAAGAGGACGAGCAGCAACA 59.893 50.000 0.00 0.00 0.00 3.33
1814 2389 0.392706 TGAAAGAGGACGAGCAGCAA 59.607 50.000 0.00 0.00 0.00 3.91
1827 2402 1.070758 AGGCGCTCAGAAACTGAAAGA 59.929 47.619 7.64 0.00 40.18 2.52
1855 2431 0.676782 GGGTGTAATGAAGCCGCTGT 60.677 55.000 0.00 0.00 0.00 4.40
1863 2439 0.988832 AAGAGGCCGGGTGTAATGAA 59.011 50.000 2.18 0.00 0.00 2.57
1877 2453 6.238103 CGCAGTTAATATGGTGTGTAAAGAGG 60.238 42.308 0.00 0.00 0.00 3.69
1878 2454 6.705782 CGCAGTTAATATGGTGTGTAAAGAG 58.294 40.000 0.00 0.00 0.00 2.85
1879 2455 5.064198 GCGCAGTTAATATGGTGTGTAAAGA 59.936 40.000 0.30 0.00 0.00 2.52
1880 2456 5.263185 GCGCAGTTAATATGGTGTGTAAAG 58.737 41.667 0.30 0.00 0.00 1.85
1881 2457 4.095185 GGCGCAGTTAATATGGTGTGTAAA 59.905 41.667 10.83 0.00 0.00 2.01
1882 2458 3.623960 GGCGCAGTTAATATGGTGTGTAA 59.376 43.478 10.83 0.00 0.00 2.41
1883 2459 3.199677 GGCGCAGTTAATATGGTGTGTA 58.800 45.455 10.83 0.00 0.00 2.90
1884 2460 2.014128 GGCGCAGTTAATATGGTGTGT 58.986 47.619 10.83 0.00 0.00 3.72
1885 2461 1.333619 GGGCGCAGTTAATATGGTGTG 59.666 52.381 10.83 0.00 0.00 3.82
1886 2462 1.065053 TGGGCGCAGTTAATATGGTGT 60.065 47.619 10.83 0.00 0.00 4.16
1887 2463 1.674359 TGGGCGCAGTTAATATGGTG 58.326 50.000 10.83 0.00 0.00 4.17
1888 2464 2.428544 TTGGGCGCAGTTAATATGGT 57.571 45.000 10.83 0.00 0.00 3.55
1889 2465 5.048083 ACATTATTGGGCGCAGTTAATATGG 60.048 40.000 10.83 6.04 0.00 2.74
1890 2466 5.858049 CACATTATTGGGCGCAGTTAATATG 59.142 40.000 10.83 13.07 0.00 1.78
1891 2467 5.048083 CCACATTATTGGGCGCAGTTAATAT 60.048 40.000 10.83 6.96 32.35 1.28
1944 2520 2.365410 GGCTGGCCCAGAATTTTGT 58.635 52.632 16.85 0.00 32.44 2.83
1959 2535 1.205055 GCTCCCTAGTAACTTGGGCT 58.795 55.000 7.74 0.00 44.26 5.19
1967 2543 0.909623 GCTGTTGGGCTCCCTAGTAA 59.090 55.000 6.50 0.00 36.94 2.24
2024 2600 3.439857 TTCTATTCTTGCAACTGGGCT 57.560 42.857 0.00 0.00 34.04 5.19
2109 2685 2.278857 CGAGGCATCGGTTCGGAG 60.279 66.667 13.95 0.00 45.39 4.63
2134 2710 3.767806 CTGCTGCAGGAGAGGCGA 61.768 66.667 29.60 0.00 35.31 5.54
2274 2850 1.713647 AGAGAAGGAGGAGAGTGGTGA 59.286 52.381 0.00 0.00 0.00 4.02
2322 2898 1.132643 AGAGTAGCCGCGTTAGTCAAG 59.867 52.381 18.93 0.00 0.00 3.02
2364 2940 1.815421 CGCAGGGTCGAATGGGAAG 60.815 63.158 5.06 0.00 0.00 3.46
2370 2946 1.376609 GAAATGGCGCAGGGTCGAAT 61.377 55.000 10.83 0.00 0.00 3.34
2507 3083 5.680619 TGAGAAAACTTACTTCTCCTTGCA 58.319 37.500 9.46 0.00 45.50 4.08
2627 3203 1.032657 ATCTCTATCGGCCGCGCTAT 61.033 55.000 23.51 11.73 0.00 2.97
2631 3207 0.784778 GAAAATCTCTATCGGCCGCG 59.215 55.000 23.51 11.63 0.00 6.46
2703 3279 3.205056 TCCAATTCAGCCCCTCATTATGT 59.795 43.478 0.00 0.00 0.00 2.29
2727 3303 7.064371 CAGACATCTCGATTCAGATTGAAGTTT 59.936 37.037 0.00 0.00 40.05 2.66
2895 3471 2.816087 GCTTGCAGGAACATCTTTGAGA 59.184 45.455 0.00 0.00 0.00 3.27
2910 3486 1.108727 CAGAAACCACCAGGCTTGCA 61.109 55.000 0.00 0.00 39.06 4.08
2916 3492 1.903404 GGCACCAGAAACCACCAGG 60.903 63.158 0.00 0.00 42.21 4.45
3040 3616 2.449518 TGGTGGCCTTGGGTGAGA 60.450 61.111 3.32 0.00 0.00 3.27
3163 3740 6.120220 TCATCTTCATCATCAGCATTCAGTT 58.880 36.000 0.00 0.00 0.00 3.16
3166 3743 5.473504 CCATCATCTTCATCATCAGCATTCA 59.526 40.000 0.00 0.00 0.00 2.57
3210 3787 4.091939 AGGATGCTGCTGCTGCGA 62.092 61.111 23.38 14.44 43.34 5.10
3309 3895 2.306805 TGAGCCCACTGTGATCATCTTT 59.693 45.455 9.86 0.00 0.00 2.52
3440 4026 1.152030 AGGTGCAACTGGAGGAGGA 60.152 57.895 1.66 0.00 36.74 3.71
3441 4027 1.002868 CAGGTGCAACTGGAGGAGG 60.003 63.158 24.65 0.00 36.74 4.30
3442 4028 0.109342 AACAGGTGCAACTGGAGGAG 59.891 55.000 33.95 9.92 42.75 3.69
3498 4084 2.435805 CCAAGTCTTCTATGGGCAGCTA 59.564 50.000 0.00 0.00 0.00 3.32
3527 4113 1.004511 AGAGCAGGCAAATGAGCTTCT 59.995 47.619 0.00 0.00 37.48 2.85
3561 4147 2.005451 CGGAAGAGATTCAGCAACCAG 58.995 52.381 0.00 0.00 0.00 4.00
3581 4167 1.745653 GGTAGTTCCATTTGAGGCTGC 59.254 52.381 0.00 0.00 35.97 5.25
3592 4178 2.176889 GCTCTGGTACTGGTAGTTCCA 58.823 52.381 7.05 7.05 42.33 3.53
3664 4271 5.051891 AGCATCAATTTCAGCTACAACAC 57.948 39.130 0.00 0.00 35.19 3.32
3690 4297 1.453379 CAATGGGGAGAGCAGCAGG 60.453 63.158 0.00 0.00 0.00 4.85
3767 4375 4.151335 GCAAGATCATCAGTATTGGTAGCG 59.849 45.833 0.00 0.00 0.00 4.26
3771 4379 3.881688 GCAGCAAGATCATCAGTATTGGT 59.118 43.478 0.00 0.00 32.23 3.67
3828 4436 0.968405 GCCAGAGATAGGAGAGCCTG 59.032 60.000 0.00 0.00 46.45 4.85
3867 4477 2.288702 TGAGAGCTTCAGTCTGTTCAGC 60.289 50.000 11.33 11.33 0.00 4.26
3876 4528 4.521639 TGCATTTTGATTGAGAGCTTCAGT 59.478 37.500 0.00 0.00 37.07 3.41
3877 4529 5.055642 TGCATTTTGATTGAGAGCTTCAG 57.944 39.130 0.00 0.00 37.07 3.02
3972 4662 5.680594 ATTGAATATCCTTGCCAGCAAAA 57.319 34.783 6.52 0.00 35.33 2.44
4005 4695 3.621225 TCCTGACCTGAGGATGCG 58.379 61.111 4.99 0.00 37.20 4.73
4044 4734 0.900182 CCTTCCAAAGCTCCAACCCC 60.900 60.000 0.00 0.00 0.00 4.95
4101 4791 3.214328 GCACCATTCAATAGGTACCTGG 58.786 50.000 25.33 17.67 36.07 4.45
4131 4821 5.976458 TCCACAGTCAAAAGAGCAAAAATT 58.024 33.333 0.00 0.00 0.00 1.82
4177 4867 5.440610 AGTCCATAATTGGGAAGCAAGTAG 58.559 41.667 2.57 0.00 43.81 2.57
4386 5076 0.251297 TCCTTTGGGTGTGAGCATGG 60.251 55.000 0.00 0.00 0.00 3.66
4410 5100 3.628257 CCACCATGGGAGCCTTATCTTTT 60.628 47.826 18.09 0.00 32.67 2.27
4419 5109 0.967380 CAGTTTCCACCATGGGAGCC 60.967 60.000 18.09 0.00 38.32 4.70
4560 5955 4.397420 TGCAAAAGGAGACAGCAAGATTA 58.603 39.130 0.00 0.00 31.42 1.75
4617 6012 3.560882 CCTTCTTCTTCTTGGGCTGATGT 60.561 47.826 0.00 0.00 0.00 3.06
4724 6123 8.630054 ATTTCTTGTTGCTTACATAGGTAACA 57.370 30.769 0.00 1.44 36.45 2.41
4736 6135 6.096001 CCCAGCTCTAATATTTCTTGTTGCTT 59.904 38.462 0.00 0.00 0.00 3.91
4778 6177 8.274322 TCAAAAGTACCATGGATAGAACATCAT 58.726 33.333 21.47 0.00 0.00 2.45
4801 6200 7.445096 TCTCATTACAAAAGCATTGTCTCTCAA 59.555 33.333 10.71 1.63 40.53 3.02
4828 6227 5.314718 TGGAGCATCACATTAGGATTCAT 57.685 39.130 0.00 0.00 36.25 2.57
4834 6233 1.884579 GCCATGGAGCATCACATTAGG 59.115 52.381 18.40 0.00 36.25 2.69
4906 6306 2.681706 ACAGAGCAGAAGATCACAACG 58.318 47.619 0.00 0.00 30.99 4.10
4984 6387 8.750515 AAGTCTGTAACTAGTACTATTCCTCC 57.249 38.462 2.33 0.00 37.17 4.30
5010 6413 9.863650 AGGTTCTATTCATGATCAGATTGAATT 57.136 29.630 21.93 10.84 39.90 2.17
5012 6415 7.718314 CCAGGTTCTATTCATGATCAGATTGAA 59.282 37.037 11.58 11.58 34.18 2.69
5015 6418 7.384524 TCCAGGTTCTATTCATGATCAGATT 57.615 36.000 0.09 0.00 0.00 2.40
5135 6538 7.391148 AGTGTTCTTTCTTAGTTTCTTGCAA 57.609 32.000 0.00 0.00 0.00 4.08
5239 6642 1.885049 TCCAAGCTATGAGAAGCCCT 58.115 50.000 0.00 0.00 43.86 5.19
5322 6726 3.119316 CGAATCACCAGTGAGCTTAGACT 60.119 47.826 6.63 0.00 43.61 3.24
5388 6792 6.207614 GCTGAACCAGTTTAGGAAATCTTCTT 59.792 38.462 4.70 0.00 33.43 2.52
5422 6826 5.114764 TCCATTTTGTCTCATCAGGCATA 57.885 39.130 0.00 0.00 32.99 3.14
5472 6876 7.013220 AGATCTGCTTCTATTGTGAGGGTATA 58.987 38.462 0.00 0.00 0.00 1.47
5479 6883 3.135348 CCCCAGATCTGCTTCTATTGTGA 59.865 47.826 17.76 0.00 0.00 3.58
5494 6898 3.188880 TCAGAAAAATTGCCCCCAGAT 57.811 42.857 0.00 0.00 0.00 2.90
5519 6924 7.594015 GCTATTGATGGCATCATTGAACTTTAG 59.406 37.037 29.22 17.77 39.39 1.85
5681 7086 0.765510 ACAGGTTTGGACAGAGGGAC 59.234 55.000 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.