Multiple sequence alignment - TraesCS3D01G314500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G314500 chr3D 100.000 5154 0 0 1 5154 428260919 428255766 0.000000e+00 9518.0
1 TraesCS3D01G314500 chr3D 90.541 370 28 5 4068 4436 428250405 428250042 2.790000e-132 483.0
2 TraesCS3D01G314500 chr3D 83.333 444 64 9 4497 4937 428249759 428249323 8.040000e-108 401.0
3 TraesCS3D01G314500 chr3D 89.583 192 19 1 3853 4043 428250659 428250468 5.160000e-60 243.0
4 TraesCS3D01G314500 chr3B 93.251 2593 109 29 1707 4252 559896207 559893634 0.000000e+00 3759.0
5 TraesCS3D01G314500 chr3B 86.107 1346 117 34 224 1540 559897510 559896206 0.000000e+00 1386.0
6 TraesCS3D01G314500 chr3B 97.179 390 10 1 4765 5154 559893366 559892978 0.000000e+00 658.0
7 TraesCS3D01G314500 chr3B 89.362 376 28 6 4067 4436 559885886 559885517 3.640000e-126 462.0
8 TraesCS3D01G314500 chr3B 94.828 232 9 3 4490 4719 559893592 559893362 4.910000e-95 359.0
9 TraesCS3D01G314500 chr3B 91.216 148 13 0 3911 4058 559886073 559885926 8.750000e-48 202.0
10 TraesCS3D01G314500 chr3B 83.117 77 10 1 7 80 800207984 800208060 3.330000e-07 67.6
11 TraesCS3D01G314500 chr3B 94.595 37 2 0 4449 4485 559893589 559893625 2.000000e-04 58.4
12 TraesCS3D01G314500 chr3A 90.113 1851 103 34 2449 4244 557406529 557408354 0.000000e+00 2331.0
13 TraesCS3D01G314500 chr3A 91.700 759 34 12 1707 2448 557405732 557406478 0.000000e+00 1026.0
14 TraesCS3D01G314500 chr3A 92.913 635 29 6 1707 2331 557388443 557389071 0.000000e+00 909.0
15 TraesCS3D01G314500 chr3A 87.108 830 48 24 735 1540 557387650 557388444 0.000000e+00 885.0
16 TraesCS3D01G314500 chr3A 93.728 558 31 4 4490 5044 557408393 557408949 0.000000e+00 833.0
17 TraesCS3D01G314500 chr3A 94.037 436 23 1 1105 1540 557405301 557405733 0.000000e+00 658.0
18 TraesCS3D01G314500 chr3A 95.402 174 2 2 1535 1708 41183444 41183277 6.580000e-69 272.0
19 TraesCS3D01G314500 chr3A 82.840 338 9 14 735 1055 557404478 557404783 1.840000e-64 257.0
20 TraesCS3D01G314500 chr3A 89.840 187 15 4 1523 1709 413683273 413683455 2.400000e-58 237.0
21 TraesCS3D01G314500 chr3A 90.643 171 13 1 3891 4058 557414122 557414292 1.870000e-54 224.0
22 TraesCS3D01G314500 chr3A 100.000 59 0 0 5096 5154 557408942 557409000 5.460000e-20 110.0
23 TraesCS3D01G314500 chrUn 94.444 180 3 2 1534 1713 61009440 61009612 2.370000e-68 270.0
24 TraesCS3D01G314500 chrUn 78.704 108 21 2 678 783 9822942 9822835 2.570000e-08 71.3
25 TraesCS3D01G314500 chr5D 97.452 157 4 0 1559 1715 537399713 537399557 8.510000e-68 268.0
26 TraesCS3D01G314500 chr5D 88.268 179 13 6 1531 1708 438829644 438829815 1.880000e-49 207.0
27 TraesCS3D01G314500 chr5D 72.537 670 116 38 130 782 547504865 547504247 6.910000e-34 156.0
28 TraesCS3D01G314500 chr5D 76.238 202 46 2 243 442 282347068 282346867 7.060000e-19 106.0
29 TraesCS3D01G314500 chr5D 79.762 84 17 0 44 127 358827002 358827085 1.550000e-05 62.1
30 TraesCS3D01G314500 chr5A 94.382 178 3 3 1534 1711 676319301 676319131 3.060000e-67 267.0
31 TraesCS3D01G314500 chr2D 96.273 161 5 1 1559 1719 5377979 5377820 3.960000e-66 263.0
32 TraesCS3D01G314500 chr2D 82.162 185 26 3 596 780 11105608 11105431 8.940000e-33 152.0
33 TraesCS3D01G314500 chr4D 94.253 174 4 2 1539 1712 281177251 281177084 1.420000e-65 261.0
34 TraesCS3D01G314500 chr4D 72.655 629 110 34 130 745 108833472 108832893 8.940000e-33 152.0
35 TraesCS3D01G314500 chr4D 79.528 127 22 4 647 769 100335601 100335727 2.560000e-13 87.9
36 TraesCS3D01G314500 chr4D 84.146 82 12 1 702 783 497626753 497626833 1.540000e-10 78.7
37 TraesCS3D01G314500 chr1D 93.678 174 10 1 1536 1708 54923412 54923585 5.120000e-65 259.0
38 TraesCS3D01G314500 chr1D 72.930 628 108 35 130 745 363100818 363100241 1.490000e-35 161.0
39 TraesCS3D01G314500 chr1D 72.711 568 124 21 182 739 405404020 405404566 1.490000e-35 161.0
40 TraesCS3D01G314500 chr1D 88.889 54 6 0 49 102 101583706 101583653 3.330000e-07 67.6
41 TraesCS3D01G314500 chr6D 91.667 180 8 3 1530 1708 6759159 6759332 5.160000e-60 243.0
42 TraesCS3D01G314500 chr6D 72.568 627 109 43 129 745 189414899 189414326 4.160000e-31 147.0
43 TraesCS3D01G314500 chr2A 75.711 457 88 15 166 615 12104446 12104006 1.880000e-49 207.0
44 TraesCS3D01G314500 chr2A 73.466 554 113 24 239 782 735926240 735925711 1.470000e-40 178.0
45 TraesCS3D01G314500 chr2A 74.394 289 51 13 130 407 54124727 54124451 9.130000e-18 102.0
46 TraesCS3D01G314500 chr4A 73.386 511 100 20 267 769 667846716 667846234 1.920000e-34 158.0
47 TraesCS3D01G314500 chr5B 72.640 625 113 35 129 745 8413836 8413262 2.490000e-33 154.0
48 TraesCS3D01G314500 chr5B 72.160 625 119 22 168 782 677651283 677650704 6.960000e-29 139.0
49 TraesCS3D01G314500 chr7A 81.295 139 25 1 646 783 726648175 726648037 1.520000e-20 111.0
50 TraesCS3D01G314500 chr4B 79.545 132 21 4 10 136 574424803 574424673 7.110000e-14 89.8
51 TraesCS3D01G314500 chr2B 73.626 182 33 10 1530 1708 736853399 736853230 7.210000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G314500 chr3D 428255766 428260919 5153 True 9518.000000 9518 100.000000 1 5154 1 chr3D.!!$R1 5153
1 TraesCS3D01G314500 chr3D 428249323 428250659 1336 True 375.666667 483 87.819000 3853 4937 3 chr3D.!!$R2 1084
2 TraesCS3D01G314500 chr3B 559892978 559897510 4532 True 1540.500000 3759 92.841250 224 5154 4 chr3B.!!$R2 4930
3 TraesCS3D01G314500 chr3B 559885517 559886073 556 True 332.000000 462 90.289000 3911 4436 2 chr3B.!!$R1 525
4 TraesCS3D01G314500 chr3A 557387650 557389071 1421 False 897.000000 909 90.010500 735 2331 2 chr3A.!!$F3 1596
5 TraesCS3D01G314500 chr3A 557404478 557409000 4522 False 869.166667 2331 92.069667 735 5154 6 chr3A.!!$F4 4419

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
420 422 0.031721 GGATCTCGCGGTATTCGGTT 59.968 55.000 6.13 0.0 39.69 4.44 F
561 563 0.036952 ACTCTGATGCGTTGGTCCTG 60.037 55.000 0.00 0.0 0.00 3.86 F
623 629 0.251653 TGGTTCGGCTCTAGTGAGGT 60.252 55.000 0.00 0.0 40.53 3.85 F
684 690 0.447801 CCAATGCTGGTAGTTGTCGC 59.552 55.000 0.00 0.0 38.00 5.19 F
978 1013 1.077828 TCCGCATCTCCATATCTCCCT 59.922 52.381 0.00 0.0 0.00 4.20 F
2951 3531 0.601311 GCACTATAGCGCAAGGGGAG 60.601 60.000 11.47 0.0 38.28 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1697 2201 0.663688 CGTCACATCTACTCCCTCCG 59.336 60.0 0.00 0.00 0.00 4.63 R
1706 2210 0.741326 GGAGCAGCTCGTCACATCTA 59.259 55.0 16.47 0.00 0.00 1.98 R
2514 3089 0.806868 ATGCCAGAAATGTCAGCGTG 59.193 50.0 0.00 0.00 0.00 5.34 R
2635 3215 5.066375 CCAAAGATCGATTGTTATTCAGCCA 59.934 40.0 0.00 0.00 0.00 4.75 R
2956 3536 1.090728 TGACAGCACGCTGAAAACAA 58.909 45.0 25.09 1.68 46.30 2.83 R
4727 5645 0.035630 GGAGTGCAGTGCCTCAATCT 60.036 55.0 25.36 11.07 31.05 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.971452 GGTGACGTCTCCTCCCAC 59.029 66.667 25.66 10.63 0.00 4.61
18 19 1.606889 GGTGACGTCTCCTCCCACT 60.607 63.158 25.66 0.00 0.00 4.00
19 20 1.587054 GTGACGTCTCCTCCCACTG 59.413 63.158 17.92 0.00 0.00 3.66
20 21 0.894184 GTGACGTCTCCTCCCACTGA 60.894 60.000 17.92 0.00 0.00 3.41
21 22 0.178973 TGACGTCTCCTCCCACTGAA 60.179 55.000 17.92 0.00 0.00 3.02
22 23 0.244178 GACGTCTCCTCCCACTGAAC 59.756 60.000 8.70 0.00 0.00 3.18
23 24 0.469331 ACGTCTCCTCCCACTGAACA 60.469 55.000 0.00 0.00 0.00 3.18
24 25 0.679505 CGTCTCCTCCCACTGAACAA 59.320 55.000 0.00 0.00 0.00 2.83
25 26 1.276421 CGTCTCCTCCCACTGAACAAT 59.724 52.381 0.00 0.00 0.00 2.71
26 27 2.675317 CGTCTCCTCCCACTGAACAATC 60.675 54.545 0.00 0.00 0.00 2.67
27 28 2.569404 GTCTCCTCCCACTGAACAATCT 59.431 50.000 0.00 0.00 0.00 2.40
28 29 3.008485 GTCTCCTCCCACTGAACAATCTT 59.992 47.826 0.00 0.00 0.00 2.40
29 30 3.261897 TCTCCTCCCACTGAACAATCTTC 59.738 47.826 0.00 0.00 0.00 2.87
30 31 2.028112 TCCTCCCACTGAACAATCTTCG 60.028 50.000 0.00 0.00 0.00 3.79
31 32 2.289694 CCTCCCACTGAACAATCTTCGT 60.290 50.000 0.00 0.00 0.00 3.85
32 33 2.996621 CTCCCACTGAACAATCTTCGTC 59.003 50.000 0.00 0.00 0.00 4.20
33 34 1.726791 CCCACTGAACAATCTTCGTCG 59.273 52.381 0.00 0.00 0.00 5.12
34 35 1.726791 CCACTGAACAATCTTCGTCGG 59.273 52.381 0.00 0.00 0.00 4.79
35 36 2.609491 CCACTGAACAATCTTCGTCGGA 60.609 50.000 0.00 0.00 0.00 4.55
36 37 3.057019 CACTGAACAATCTTCGTCGGAA 58.943 45.455 0.00 0.00 0.00 4.30
37 38 3.679980 CACTGAACAATCTTCGTCGGAAT 59.320 43.478 0.00 0.00 0.00 3.01
38 39 3.679980 ACTGAACAATCTTCGTCGGAATG 59.320 43.478 0.00 0.00 0.00 2.67
39 40 3.659786 TGAACAATCTTCGTCGGAATGT 58.340 40.909 0.00 0.00 0.00 2.71
40 41 3.678072 TGAACAATCTTCGTCGGAATGTC 59.322 43.478 0.00 0.00 0.00 3.06
41 42 3.594603 ACAATCTTCGTCGGAATGTCT 57.405 42.857 0.00 0.00 0.00 3.41
42 43 3.254060 ACAATCTTCGTCGGAATGTCTG 58.746 45.455 0.00 0.00 0.00 3.51
43 44 3.056821 ACAATCTTCGTCGGAATGTCTGA 60.057 43.478 0.00 0.00 0.00 3.27
44 45 3.868757 ATCTTCGTCGGAATGTCTGAA 57.131 42.857 0.00 0.00 32.84 3.02
45 46 3.653539 TCTTCGTCGGAATGTCTGAAA 57.346 42.857 0.00 0.00 32.84 2.69
46 47 4.188247 TCTTCGTCGGAATGTCTGAAAT 57.812 40.909 0.00 0.00 32.84 2.17
47 48 4.566004 TCTTCGTCGGAATGTCTGAAATT 58.434 39.130 0.00 0.00 32.84 1.82
48 49 4.625742 TCTTCGTCGGAATGTCTGAAATTC 59.374 41.667 11.40 11.40 32.84 2.17
49 50 3.920446 TCGTCGGAATGTCTGAAATTCA 58.080 40.909 19.45 0.00 36.03 2.57
50 51 4.311606 TCGTCGGAATGTCTGAAATTCAA 58.688 39.130 19.45 6.80 36.03 2.69
51 52 4.388773 TCGTCGGAATGTCTGAAATTCAAG 59.611 41.667 19.45 13.48 36.03 3.02
52 53 4.388773 CGTCGGAATGTCTGAAATTCAAGA 59.611 41.667 19.45 15.16 36.03 3.02
53 54 5.107104 CGTCGGAATGTCTGAAATTCAAGAA 60.107 40.000 19.45 2.26 36.03 2.52
54 55 6.565811 CGTCGGAATGTCTGAAATTCAAGAAA 60.566 38.462 19.45 0.78 36.03 2.52
55 56 7.138736 GTCGGAATGTCTGAAATTCAAGAAAA 58.861 34.615 19.45 0.00 36.03 2.29
56 57 7.809806 GTCGGAATGTCTGAAATTCAAGAAAAT 59.190 33.333 19.45 0.00 36.03 1.82
57 58 7.809331 TCGGAATGTCTGAAATTCAAGAAAATG 59.191 33.333 19.45 2.48 36.03 2.32
58 59 7.411157 CGGAATGTCTGAAATTCAAGAAAATGC 60.411 37.037 19.45 1.57 36.03 3.56
59 60 6.939551 ATGTCTGAAATTCAAGAAAATGCG 57.060 33.333 0.00 0.00 0.00 4.73
60 61 6.070897 TGTCTGAAATTCAAGAAAATGCGA 57.929 33.333 0.00 0.00 0.00 5.10
61 62 6.144854 TGTCTGAAATTCAAGAAAATGCGAG 58.855 36.000 0.00 0.00 0.00 5.03
62 63 5.060200 GTCTGAAATTCAAGAAAATGCGAGC 59.940 40.000 0.00 0.00 0.00 5.03
63 64 4.869215 TGAAATTCAAGAAAATGCGAGCA 58.131 34.783 0.00 0.00 0.00 4.26
64 65 4.681025 TGAAATTCAAGAAAATGCGAGCAC 59.319 37.500 0.00 0.00 0.00 4.40
65 66 2.704725 TTCAAGAAAATGCGAGCACC 57.295 45.000 0.00 0.00 0.00 5.01
66 67 1.603456 TCAAGAAAATGCGAGCACCA 58.397 45.000 0.00 0.00 0.00 4.17
67 68 1.952990 TCAAGAAAATGCGAGCACCAA 59.047 42.857 0.00 0.00 0.00 3.67
68 69 2.557924 TCAAGAAAATGCGAGCACCAAT 59.442 40.909 0.00 0.00 0.00 3.16
69 70 2.642139 AGAAAATGCGAGCACCAATG 57.358 45.000 0.00 0.00 0.00 2.82
80 81 2.927553 GCACCAATGCCAAGTCTAAG 57.072 50.000 0.00 0.00 46.97 2.18
81 82 2.162681 GCACCAATGCCAAGTCTAAGT 58.837 47.619 0.00 0.00 46.97 2.24
82 83 2.558359 GCACCAATGCCAAGTCTAAGTT 59.442 45.455 0.00 0.00 46.97 2.66
83 84 3.005791 GCACCAATGCCAAGTCTAAGTTT 59.994 43.478 0.00 0.00 46.97 2.66
84 85 4.501400 GCACCAATGCCAAGTCTAAGTTTT 60.501 41.667 0.00 0.00 46.97 2.43
85 86 4.984161 CACCAATGCCAAGTCTAAGTTTTG 59.016 41.667 0.00 0.00 0.00 2.44
86 87 4.892934 ACCAATGCCAAGTCTAAGTTTTGA 59.107 37.500 0.00 0.00 0.00 2.69
87 88 5.362430 ACCAATGCCAAGTCTAAGTTTTGAA 59.638 36.000 0.00 0.00 0.00 2.69
88 89 5.691754 CCAATGCCAAGTCTAAGTTTTGAAC 59.308 40.000 0.00 0.00 0.00 3.18
89 90 6.272318 CAATGCCAAGTCTAAGTTTTGAACA 58.728 36.000 0.00 0.00 0.00 3.18
90 91 5.243426 TGCCAAGTCTAAGTTTTGAACAC 57.757 39.130 0.00 0.00 0.00 3.32
91 92 4.947388 TGCCAAGTCTAAGTTTTGAACACT 59.053 37.500 0.00 0.00 0.00 3.55
92 93 6.116806 TGCCAAGTCTAAGTTTTGAACACTA 58.883 36.000 0.00 0.00 0.00 2.74
93 94 6.260050 TGCCAAGTCTAAGTTTTGAACACTAG 59.740 38.462 0.00 0.00 0.00 2.57
94 95 6.260271 GCCAAGTCTAAGTTTTGAACACTAGT 59.740 38.462 0.00 0.00 0.00 2.57
95 96 7.630924 CCAAGTCTAAGTTTTGAACACTAGTG 58.369 38.462 21.44 21.44 0.00 2.74
96 97 7.254795 CCAAGTCTAAGTTTTGAACACTAGTGG 60.255 40.741 26.12 9.07 34.19 4.00
97 98 6.289064 AGTCTAAGTTTTGAACACTAGTGGG 58.711 40.000 26.12 3.08 34.19 4.61
98 99 5.049612 GTCTAAGTTTTGAACACTAGTGGGC 60.050 44.000 26.12 17.22 34.19 5.36
99 100 3.577805 AGTTTTGAACACTAGTGGGCT 57.422 42.857 26.12 10.67 34.19 5.19
100 101 4.699925 AGTTTTGAACACTAGTGGGCTA 57.300 40.909 26.12 11.73 34.19 3.93
110 111 3.460857 CTAGTGGGCTAGTTCCATCAC 57.539 52.381 9.58 0.48 39.77 3.06
111 112 1.656587 AGTGGGCTAGTTCCATCACA 58.343 50.000 9.58 0.00 36.58 3.58
112 113 1.985159 AGTGGGCTAGTTCCATCACAA 59.015 47.619 9.58 0.00 36.58 3.33
113 114 2.578021 AGTGGGCTAGTTCCATCACAAT 59.422 45.455 9.58 0.00 36.58 2.71
114 115 3.780294 AGTGGGCTAGTTCCATCACAATA 59.220 43.478 9.58 0.00 36.58 1.90
115 116 4.227300 AGTGGGCTAGTTCCATCACAATAA 59.773 41.667 9.58 0.00 36.58 1.40
116 117 4.947388 GTGGGCTAGTTCCATCACAATAAA 59.053 41.667 9.58 0.00 36.58 1.40
117 118 4.947388 TGGGCTAGTTCCATCACAATAAAC 59.053 41.667 3.32 0.00 0.00 2.01
118 119 5.193679 GGGCTAGTTCCATCACAATAAACT 58.806 41.667 0.00 0.00 34.70 2.66
119 120 5.652452 GGGCTAGTTCCATCACAATAAACTT 59.348 40.000 0.00 0.00 32.71 2.66
120 121 6.826741 GGGCTAGTTCCATCACAATAAACTTA 59.173 38.462 0.00 0.00 32.71 2.24
121 122 7.338449 GGGCTAGTTCCATCACAATAAACTTAA 59.662 37.037 0.00 0.00 32.71 1.85
122 123 8.182227 GGCTAGTTCCATCACAATAAACTTAAC 58.818 37.037 0.00 0.00 32.71 2.01
123 124 8.182227 GCTAGTTCCATCACAATAAACTTAACC 58.818 37.037 0.00 0.00 32.71 2.85
124 125 9.226606 CTAGTTCCATCACAATAAACTTAACCA 57.773 33.333 0.00 0.00 32.71 3.67
125 126 8.650143 AGTTCCATCACAATAAACTTAACCAT 57.350 30.769 0.00 0.00 0.00 3.55
126 127 8.739972 AGTTCCATCACAATAAACTTAACCATC 58.260 33.333 0.00 0.00 0.00 3.51
127 128 7.315247 TCCATCACAATAAACTTAACCATCG 57.685 36.000 0.00 0.00 0.00 3.84
128 129 6.317642 TCCATCACAATAAACTTAACCATCGG 59.682 38.462 0.00 0.00 0.00 4.18
129 130 6.317642 CCATCACAATAAACTTAACCATCGGA 59.682 38.462 0.00 0.00 0.00 4.55
130 131 6.978343 TCACAATAAACTTAACCATCGGAG 57.022 37.500 0.00 0.00 0.00 4.63
131 132 5.353123 TCACAATAAACTTAACCATCGGAGC 59.647 40.000 0.00 0.00 0.00 4.70
132 133 5.354234 CACAATAAACTTAACCATCGGAGCT 59.646 40.000 0.00 0.00 0.00 4.09
133 134 6.537301 CACAATAAACTTAACCATCGGAGCTA 59.463 38.462 0.00 0.00 0.00 3.32
134 135 6.761714 ACAATAAACTTAACCATCGGAGCTAG 59.238 38.462 0.00 0.00 0.00 3.42
135 136 3.821421 AACTTAACCATCGGAGCTAGG 57.179 47.619 0.00 0.00 0.00 3.02
136 137 2.040178 ACTTAACCATCGGAGCTAGGG 58.960 52.381 0.00 0.00 0.00 3.53
137 138 2.040178 CTTAACCATCGGAGCTAGGGT 58.960 52.381 0.00 0.00 0.00 4.34
138 139 2.170012 TAACCATCGGAGCTAGGGTT 57.830 50.000 8.92 8.92 43.74 4.11
139 140 0.831307 AACCATCGGAGCTAGGGTTC 59.169 55.000 0.00 0.00 37.25 3.62
140 141 1.049289 ACCATCGGAGCTAGGGTTCC 61.049 60.000 0.00 0.00 39.12 3.62
141 142 0.760945 CCATCGGAGCTAGGGTTCCT 60.761 60.000 0.00 0.00 40.14 3.36
142 143 0.676736 CATCGGAGCTAGGGTTCCTC 59.323 60.000 0.00 0.00 40.14 3.71
143 144 0.558712 ATCGGAGCTAGGGTTCCTCT 59.441 55.000 0.00 0.00 40.14 3.69
144 145 0.395862 TCGGAGCTAGGGTTCCTCTG 60.396 60.000 0.00 0.00 40.14 3.35
145 146 1.826709 GGAGCTAGGGTTCCTCTGC 59.173 63.158 0.00 0.00 39.36 4.26
146 147 1.691195 GGAGCTAGGGTTCCTCTGCC 61.691 65.000 0.00 0.00 39.36 4.85
147 148 0.689412 GAGCTAGGGTTCCTCTGCCT 60.689 60.000 0.00 0.00 35.07 4.75
148 149 0.689412 AGCTAGGGTTCCTCTGCCTC 60.689 60.000 0.00 0.00 35.07 4.70
149 150 1.691195 GCTAGGGTTCCTCTGCCTCC 61.691 65.000 0.00 0.00 34.61 4.30
150 151 1.003051 TAGGGTTCCTCTGCCTCCC 59.997 63.158 0.00 0.00 38.50 4.30
151 152 2.873557 TAGGGTTCCTCTGCCTCCCG 62.874 65.000 0.00 0.00 42.57 5.14
152 153 4.475135 GGTTCCTCTGCCTCCCGC 62.475 72.222 0.00 0.00 38.31 6.13
153 154 4.475135 GTTCCTCTGCCTCCCGCC 62.475 72.222 0.00 0.00 36.24 6.13
172 173 4.828925 GCTCCAGCCTGCCTCGTC 62.829 72.222 0.00 0.00 34.31 4.20
173 174 3.073735 CTCCAGCCTGCCTCGTCT 61.074 66.667 0.00 0.00 0.00 4.18
174 175 3.071206 TCCAGCCTGCCTCGTCTC 61.071 66.667 0.00 0.00 0.00 3.36
175 176 4.154347 CCAGCCTGCCTCGTCTCC 62.154 72.222 0.00 0.00 0.00 3.71
176 177 4.504916 CAGCCTGCCTCGTCTCCG 62.505 72.222 0.00 0.00 0.00 4.63
179 180 3.522731 CCTGCCTCGTCTCCGGAG 61.523 72.222 26.32 26.32 33.95 4.63
206 207 3.770040 CCATCGAGGCGTGGTGGA 61.770 66.667 5.49 0.00 31.15 4.02
207 208 2.509336 CATCGAGGCGTGGTGGAC 60.509 66.667 0.00 0.00 0.00 4.02
208 209 3.771160 ATCGAGGCGTGGTGGACC 61.771 66.667 0.00 0.00 0.00 4.46
209 210 4.988716 TCGAGGCGTGGTGGACCT 62.989 66.667 0.00 0.00 36.82 3.85
210 211 4.436998 CGAGGCGTGGTGGACCTC 62.437 72.222 0.00 0.00 45.44 3.85
212 213 3.314331 AGGCGTGGTGGACCTCAG 61.314 66.667 0.00 0.00 36.82 3.35
215 216 3.625897 CGTGGTGGACCTCAGCCA 61.626 66.667 0.00 0.00 42.81 4.75
216 217 2.959484 CGTGGTGGACCTCAGCCAT 61.959 63.158 0.00 0.00 42.81 4.40
217 218 1.380302 GTGGTGGACCTCAGCCATT 59.620 57.895 0.00 0.00 42.81 3.16
218 219 0.962356 GTGGTGGACCTCAGCCATTG 60.962 60.000 0.00 0.00 42.81 2.82
219 220 2.048603 GGTGGACCTCAGCCATTGC 61.049 63.158 0.00 0.00 37.81 3.56
220 221 2.048603 GTGGACCTCAGCCATTGCC 61.049 63.158 0.00 0.00 37.81 4.52
221 222 2.825836 GGACCTCAGCCATTGCCG 60.826 66.667 0.00 0.00 38.69 5.69
222 223 2.825836 GACCTCAGCCATTGCCGG 60.826 66.667 0.00 0.00 38.69 6.13
241 242 0.919289 GGGGGAGGGATCTTGTTCCA 60.919 60.000 0.00 0.00 37.53 3.53
242 243 1.226311 GGGGAGGGATCTTGTTCCAT 58.774 55.000 0.00 0.00 37.53 3.41
265 267 7.710475 CCATTTTTAGGTGTTTTGTGAGTTCAT 59.290 33.333 0.00 0.00 0.00 2.57
269 271 9.796120 TTTTAGGTGTTTTGTGAGTTCATTTAG 57.204 29.630 0.00 0.00 0.00 1.85
278 280 4.037446 TGTGAGTTCATTTAGGGTTTGTGC 59.963 41.667 0.00 0.00 0.00 4.57
288 290 1.588082 GGTTTGTGCCATGCTCAGG 59.412 57.895 0.00 0.00 33.64 3.86
293 295 0.321919 TGTGCCATGCTCAGGAAGAC 60.322 55.000 0.00 0.00 0.00 3.01
294 296 0.321919 GTGCCATGCTCAGGAAGACA 60.322 55.000 0.00 0.00 0.00 3.41
296 298 1.202915 TGCCATGCTCAGGAAGACAAA 60.203 47.619 0.00 0.00 0.00 2.83
297 299 1.888512 GCCATGCTCAGGAAGACAAAA 59.111 47.619 0.00 0.00 0.00 2.44
299 301 2.229784 CCATGCTCAGGAAGACAAAACC 59.770 50.000 0.00 0.00 0.00 3.27
305 307 0.106918 AGGAAGACAAAACCGTGGCA 60.107 50.000 0.00 0.00 0.00 4.92
306 308 0.741915 GGAAGACAAAACCGTGGCAA 59.258 50.000 0.00 0.00 0.00 4.52
319 321 2.009774 CGTGGCAACTCCCTAAAGATG 58.990 52.381 0.00 0.00 37.61 2.90
345 347 3.081409 TTCACTCCGCCTAGCCCC 61.081 66.667 0.00 0.00 0.00 5.80
357 359 1.062962 CCTAGCCCCCATTTTGGTGAT 60.063 52.381 0.00 0.00 35.17 3.06
362 364 1.278537 CCCCATTTTGGTGATGCCTT 58.721 50.000 0.00 0.00 35.17 4.35
379 381 0.248949 CTTTAGCGTCGTAGGAGGGC 60.249 60.000 7.19 4.13 0.00 5.19
386 388 4.143333 CGTAGGAGGGCGTGTGGG 62.143 72.222 0.00 0.00 0.00 4.61
391 393 4.091939 GAGGGCGTGTGGGGGTAC 62.092 72.222 0.00 0.00 0.00 3.34
399 401 3.455469 GTGGGGGTACGTCTCCGG 61.455 72.222 0.00 0.00 37.63 5.14
407 409 0.662085 GTACGTCTCCGGTGGATCTC 59.338 60.000 0.00 0.00 38.78 2.75
418 420 0.663568 GTGGATCTCGCGGTATTCGG 60.664 60.000 6.13 0.00 39.69 4.30
420 422 0.031721 GGATCTCGCGGTATTCGGTT 59.968 55.000 6.13 0.00 39.69 4.44
456 458 2.726821 TGGATTTGCTTGGATCCAGTC 58.273 47.619 15.53 11.16 45.14 3.51
464 466 3.181440 TGCTTGGATCCAGTCTTTGTTCT 60.181 43.478 15.53 0.00 0.00 3.01
466 468 4.083057 GCTTGGATCCAGTCTTTGTTCTTC 60.083 45.833 15.53 0.00 0.00 2.87
468 470 5.310409 TGGATCCAGTCTTTGTTCTTCTT 57.690 39.130 11.44 0.00 0.00 2.52
469 471 5.308825 TGGATCCAGTCTTTGTTCTTCTTC 58.691 41.667 11.44 0.00 0.00 2.87
470 472 4.390297 GGATCCAGTCTTTGTTCTTCTTCG 59.610 45.833 6.95 0.00 0.00 3.79
471 473 4.402056 TCCAGTCTTTGTTCTTCTTCGT 57.598 40.909 0.00 0.00 0.00 3.85
472 474 4.766375 TCCAGTCTTTGTTCTTCTTCGTT 58.234 39.130 0.00 0.00 0.00 3.85
473 475 4.809426 TCCAGTCTTTGTTCTTCTTCGTTC 59.191 41.667 0.00 0.00 0.00 3.95
474 476 4.570772 CCAGTCTTTGTTCTTCTTCGTTCA 59.429 41.667 0.00 0.00 0.00 3.18
475 477 5.237344 CCAGTCTTTGTTCTTCTTCGTTCAT 59.763 40.000 0.00 0.00 0.00 2.57
476 478 6.132056 CAGTCTTTGTTCTTCTTCGTTCATG 58.868 40.000 0.00 0.00 0.00 3.07
477 479 5.817816 AGTCTTTGTTCTTCTTCGTTCATGT 59.182 36.000 0.00 0.00 0.00 3.21
478 480 5.904080 GTCTTTGTTCTTCTTCGTTCATGTG 59.096 40.000 0.00 0.00 0.00 3.21
479 481 5.584649 TCTTTGTTCTTCTTCGTTCATGTGT 59.415 36.000 0.00 0.00 0.00 3.72
480 482 5.403897 TTGTTCTTCTTCGTTCATGTGTC 57.596 39.130 0.00 0.00 0.00 3.67
481 483 4.693283 TGTTCTTCTTCGTTCATGTGTCT 58.307 39.130 0.00 0.00 0.00 3.41
482 484 5.838529 TGTTCTTCTTCGTTCATGTGTCTA 58.161 37.500 0.00 0.00 0.00 2.59
483 485 6.455647 TGTTCTTCTTCGTTCATGTGTCTAT 58.544 36.000 0.00 0.00 0.00 1.98
484 486 7.599171 TGTTCTTCTTCGTTCATGTGTCTATA 58.401 34.615 0.00 0.00 0.00 1.31
485 487 7.541091 TGTTCTTCTTCGTTCATGTGTCTATAC 59.459 37.037 0.00 0.00 0.00 1.47
490 492 8.678593 TCTTCGTTCATGTGTCTATACTCTAT 57.321 34.615 0.00 0.00 0.00 1.98
497 499 8.637196 TCATGTGTCTATACTCTATAGGTTGG 57.363 38.462 0.00 0.00 38.88 3.77
501 503 8.445588 TGTGTCTATACTCTATAGGTTGGATCA 58.554 37.037 0.00 0.00 38.88 2.92
540 542 1.126846 CTCTTCATTGACGACGGTTGC 59.873 52.381 0.00 0.00 0.00 4.17
542 544 2.029739 TCTTCATTGACGACGGTTGCTA 60.030 45.455 0.00 0.00 0.00 3.49
543 545 1.705256 TCATTGACGACGGTTGCTAC 58.295 50.000 0.00 0.00 0.00 3.58
559 561 1.927895 CTACTCTGATGCGTTGGTCC 58.072 55.000 0.00 0.00 0.00 4.46
561 563 0.036952 ACTCTGATGCGTTGGTCCTG 60.037 55.000 0.00 0.00 0.00 3.86
566 568 2.463589 GATGCGTTGGTCCTGTGGGA 62.464 60.000 0.00 0.00 39.70 4.37
575 577 3.417330 TCCTGTGGGACCTTAGCAT 57.583 52.632 0.00 0.00 36.57 3.79
578 580 2.504175 TCCTGTGGGACCTTAGCATAAC 59.496 50.000 0.00 0.00 36.57 1.89
579 581 2.238646 CCTGTGGGACCTTAGCATAACA 59.761 50.000 0.00 0.00 33.58 2.41
580 582 3.117888 CCTGTGGGACCTTAGCATAACAT 60.118 47.826 0.00 0.00 33.58 2.71
585 587 4.141482 TGGGACCTTAGCATAACATCTTCC 60.141 45.833 0.00 0.00 0.00 3.46
588 590 5.456763 GGACCTTAGCATAACATCTTCCCAT 60.457 44.000 0.00 0.00 0.00 4.00
592 594 4.096190 AGCATAACATCTTCCCATCTGG 57.904 45.455 0.00 0.00 0.00 3.86
607 613 1.846007 TCTGGTGCAACAAGTTTGGT 58.154 45.000 5.64 0.00 39.55 3.67
608 614 2.175202 TCTGGTGCAACAAGTTTGGTT 58.825 42.857 5.64 0.00 39.55 3.67
615 621 1.676006 CAACAAGTTTGGTTCGGCTCT 59.324 47.619 0.00 0.00 0.00 4.09
616 622 2.875933 CAACAAGTTTGGTTCGGCTCTA 59.124 45.455 0.00 0.00 0.00 2.43
623 629 0.251653 TGGTTCGGCTCTAGTGAGGT 60.252 55.000 0.00 0.00 40.53 3.85
633 639 3.822940 CTCTAGTGAGGTAGGGACGATT 58.177 50.000 0.00 0.00 36.70 3.34
668 674 4.388499 GCCTTCGGGTCGCTCCAA 62.388 66.667 0.00 0.00 38.11 3.53
671 677 2.435938 TTCGGGTCGCTCCAATGC 60.436 61.111 0.00 0.00 38.11 3.56
673 679 3.197790 CGGGTCGCTCCAATGCTG 61.198 66.667 0.00 0.00 38.11 4.41
674 680 2.825836 GGGTCGCTCCAATGCTGG 60.826 66.667 0.00 0.00 45.08 4.85
679 685 0.613260 TCGCTCCAATGCTGGTAGTT 59.387 50.000 0.00 0.00 43.97 2.24
684 690 0.447801 CCAATGCTGGTAGTTGTCGC 59.552 55.000 0.00 0.00 38.00 5.19
693 699 1.274447 GGTAGTTGTCGCTAGGTGGTT 59.726 52.381 0.00 0.00 0.00 3.67
699 705 3.472283 TGTCGCTAGGTGGTTTACAAA 57.528 42.857 0.00 0.00 0.00 2.83
703 709 5.583061 TGTCGCTAGGTGGTTTACAAATATG 59.417 40.000 0.00 0.00 0.00 1.78
749 755 6.316140 TGTGTTCTTTGTACTATCATGGCATC 59.684 38.462 0.00 0.00 0.00 3.91
766 772 4.074970 GGCATCATGAATAAATCGGAGGT 58.925 43.478 0.00 0.00 0.00 3.85
826 832 4.912214 ACGTACGTTTTCTTTTCCAAAGG 58.088 39.130 16.72 0.00 0.00 3.11
948 983 2.021931 GCGTACGTAGACGGGTCG 59.978 66.667 17.90 8.80 43.13 4.79
949 984 2.703409 CGTACGTAGACGGGTCGG 59.297 66.667 7.22 0.00 44.95 4.79
971 1006 1.401905 CGATCGATCCGCATCTCCATA 59.598 52.381 19.51 0.00 0.00 2.74
973 1008 3.637432 GATCGATCCGCATCTCCATATC 58.363 50.000 14.76 0.00 0.00 1.63
974 1009 2.728007 TCGATCCGCATCTCCATATCT 58.272 47.619 0.00 0.00 0.00 1.98
975 1010 2.685388 TCGATCCGCATCTCCATATCTC 59.315 50.000 0.00 0.00 0.00 2.75
976 1011 2.223688 CGATCCGCATCTCCATATCTCC 60.224 54.545 0.00 0.00 0.00 3.71
977 1012 1.561643 TCCGCATCTCCATATCTCCC 58.438 55.000 0.00 0.00 0.00 4.30
978 1013 1.077828 TCCGCATCTCCATATCTCCCT 59.922 52.381 0.00 0.00 0.00 4.20
979 1014 1.480137 CCGCATCTCCATATCTCCCTC 59.520 57.143 0.00 0.00 0.00 4.30
980 1015 1.480137 CGCATCTCCATATCTCCCTCC 59.520 57.143 0.00 0.00 0.00 4.30
981 1016 2.544721 GCATCTCCATATCTCCCTCCA 58.455 52.381 0.00 0.00 0.00 3.86
982 1017 2.909006 GCATCTCCATATCTCCCTCCAA 59.091 50.000 0.00 0.00 0.00 3.53
983 1018 3.055240 GCATCTCCATATCTCCCTCCAAG 60.055 52.174 0.00 0.00 0.00 3.61
984 1019 2.614259 TCTCCATATCTCCCTCCAAGC 58.386 52.381 0.00 0.00 0.00 4.01
985 1020 2.180973 TCTCCATATCTCCCTCCAAGCT 59.819 50.000 0.00 0.00 0.00 3.74
1358 1861 2.490217 CGCAGGAGGGAGTACGTG 59.510 66.667 0.00 0.00 0.00 4.49
1515 2019 4.181578 TCGGATTTTTCGATTCCTCTGAC 58.818 43.478 0.00 0.00 0.00 3.51
1524 2028 3.064958 TCGATTCCTCTGACGATGTACAC 59.935 47.826 0.00 0.00 0.00 2.90
1540 2044 5.073311 TGTACACTGCTTCTCCAATCTAC 57.927 43.478 0.00 0.00 0.00 2.59
1541 2045 4.772624 TGTACACTGCTTCTCCAATCTACT 59.227 41.667 0.00 0.00 0.00 2.57
1542 2046 4.464069 ACACTGCTTCTCCAATCTACTC 57.536 45.455 0.00 0.00 0.00 2.59
1543 2047 3.196685 ACACTGCTTCTCCAATCTACTCC 59.803 47.826 0.00 0.00 0.00 3.85
1544 2048 2.769095 ACTGCTTCTCCAATCTACTCCC 59.231 50.000 0.00 0.00 0.00 4.30
1545 2049 3.037549 CTGCTTCTCCAATCTACTCCCT 58.962 50.000 0.00 0.00 0.00 4.20
1546 2050 3.034635 TGCTTCTCCAATCTACTCCCTC 58.965 50.000 0.00 0.00 0.00 4.30
1547 2051 2.367241 GCTTCTCCAATCTACTCCCTCC 59.633 54.545 0.00 0.00 0.00 4.30
1548 2052 2.366640 TCTCCAATCTACTCCCTCCG 57.633 55.000 0.00 0.00 0.00 4.63
1549 2053 1.569548 TCTCCAATCTACTCCCTCCGT 59.430 52.381 0.00 0.00 0.00 4.69
1550 2054 2.024273 TCTCCAATCTACTCCCTCCGTT 60.024 50.000 0.00 0.00 0.00 4.44
1551 2055 2.362717 CTCCAATCTACTCCCTCCGTTC 59.637 54.545 0.00 0.00 0.00 3.95
1552 2056 1.413077 CCAATCTACTCCCTCCGTTCC 59.587 57.143 0.00 0.00 0.00 3.62
1553 2057 2.389715 CAATCTACTCCCTCCGTTCCT 58.610 52.381 0.00 0.00 0.00 3.36
1554 2058 3.563223 CAATCTACTCCCTCCGTTCCTA 58.437 50.000 0.00 0.00 0.00 2.94
1555 2059 3.958798 CAATCTACTCCCTCCGTTCCTAA 59.041 47.826 0.00 0.00 0.00 2.69
1556 2060 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
1557 2061 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
1558 2062 4.213513 TCTACTCCCTCCGTTCCTAAATC 58.786 47.826 0.00 0.00 0.00 2.17
1559 2063 3.117552 ACTCCCTCCGTTCCTAAATCT 57.882 47.619 0.00 0.00 0.00 2.40
1560 2064 4.261411 ACTCCCTCCGTTCCTAAATCTA 57.739 45.455 0.00 0.00 0.00 1.98
1561 2065 4.617593 ACTCCCTCCGTTCCTAAATCTAA 58.382 43.478 0.00 0.00 0.00 2.10
1562 2066 5.028131 ACTCCCTCCGTTCCTAAATCTAAA 58.972 41.667 0.00 0.00 0.00 1.85
1563 2067 5.666265 ACTCCCTCCGTTCCTAAATCTAAAT 59.334 40.000 0.00 0.00 0.00 1.40
1564 2068 6.842807 ACTCCCTCCGTTCCTAAATCTAAATA 59.157 38.462 0.00 0.00 0.00 1.40
1565 2069 7.015389 ACTCCCTCCGTTCCTAAATCTAAATAG 59.985 40.741 0.00 0.00 0.00 1.73
1566 2070 6.842807 TCCCTCCGTTCCTAAATCTAAATAGT 59.157 38.462 0.00 0.00 0.00 2.12
1567 2071 7.346436 TCCCTCCGTTCCTAAATCTAAATAGTT 59.654 37.037 0.00 0.00 0.00 2.24
1568 2072 7.441458 CCCTCCGTTCCTAAATCTAAATAGTTG 59.559 40.741 0.00 0.00 0.00 3.16
1569 2073 7.985752 CCTCCGTTCCTAAATCTAAATAGTTGT 59.014 37.037 0.00 0.00 0.00 3.32
1570 2074 8.937634 TCCGTTCCTAAATCTAAATAGTTGTC 57.062 34.615 0.00 0.00 0.00 3.18
1571 2075 8.755977 TCCGTTCCTAAATCTAAATAGTTGTCT 58.244 33.333 0.00 0.00 0.00 3.41
1572 2076 9.379791 CCGTTCCTAAATCTAAATAGTTGTCTT 57.620 33.333 0.00 0.00 0.00 3.01
1586 2090 9.847224 AAATAGTTGTCTTTCTAGAGGTTTCAA 57.153 29.630 0.00 0.00 0.00 2.69
1587 2091 9.847224 AATAGTTGTCTTTCTAGAGGTTTCAAA 57.153 29.630 0.00 0.00 0.00 2.69
1589 2093 8.159344 AGTTGTCTTTCTAGAGGTTTCAAATG 57.841 34.615 0.00 0.00 0.00 2.32
1590 2094 7.993183 AGTTGTCTTTCTAGAGGTTTCAAATGA 59.007 33.333 0.00 0.00 0.00 2.57
1591 2095 8.787852 GTTGTCTTTCTAGAGGTTTCAAATGAT 58.212 33.333 0.00 0.00 0.00 2.45
1592 2096 8.327941 TGTCTTTCTAGAGGTTTCAAATGATG 57.672 34.615 0.00 0.00 0.00 3.07
1593 2097 8.156820 TGTCTTTCTAGAGGTTTCAAATGATGA 58.843 33.333 0.00 0.00 35.85 2.92
1594 2098 8.447053 GTCTTTCTAGAGGTTTCAAATGATGAC 58.553 37.037 0.00 0.00 37.92 3.06
1595 2099 8.378565 TCTTTCTAGAGGTTTCAAATGATGACT 58.621 33.333 0.00 0.00 37.92 3.41
1596 2100 9.658799 CTTTCTAGAGGTTTCAAATGATGACTA 57.341 33.333 0.00 0.00 37.92 2.59
1597 2101 9.436957 TTTCTAGAGGTTTCAAATGATGACTAC 57.563 33.333 0.00 0.00 37.92 2.73
1598 2102 8.134202 TCTAGAGGTTTCAAATGATGACTACA 57.866 34.615 0.00 0.00 37.92 2.74
1599 2103 8.762645 TCTAGAGGTTTCAAATGATGACTACAT 58.237 33.333 0.00 0.00 37.92 2.29
1601 2105 8.723942 AGAGGTTTCAAATGATGACTACATAC 57.276 34.615 0.00 0.00 37.92 2.39
1602 2106 7.492669 AGAGGTTTCAAATGATGACTACATACG 59.507 37.037 0.00 0.00 37.92 3.06
1603 2107 7.103641 AGGTTTCAAATGATGACTACATACGT 58.896 34.615 0.00 0.00 37.92 3.57
1604 2108 8.255206 AGGTTTCAAATGATGACTACATACGTA 58.745 33.333 0.00 0.00 37.92 3.57
1618 2122 7.520119 CTACATACGTAGCAAAATGAGTGAA 57.480 36.000 0.08 0.00 38.84 3.18
1619 2123 6.985188 ACATACGTAGCAAAATGAGTGAAT 57.015 33.333 0.08 0.00 0.00 2.57
1620 2124 7.005062 ACATACGTAGCAAAATGAGTGAATC 57.995 36.000 0.08 0.00 0.00 2.52
1621 2125 6.818644 ACATACGTAGCAAAATGAGTGAATCT 59.181 34.615 0.08 0.00 0.00 2.40
1622 2126 7.979537 ACATACGTAGCAAAATGAGTGAATCTA 59.020 33.333 0.08 0.00 0.00 1.98
1623 2127 6.648725 ACGTAGCAAAATGAGTGAATCTAC 57.351 37.500 0.00 0.00 0.00 2.59
1624 2128 6.163476 ACGTAGCAAAATGAGTGAATCTACA 58.837 36.000 0.00 0.00 0.00 2.74
1625 2129 6.090898 ACGTAGCAAAATGAGTGAATCTACAC 59.909 38.462 0.00 0.00 40.60 2.90
1658 2162 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
1659 2163 7.153217 TGTCTATATACATCCGTATGTGGTG 57.847 40.000 3.56 0.00 45.99 4.17
1660 2164 6.943718 TGTCTATATACATCCGTATGTGGTGA 59.056 38.462 3.56 0.00 45.99 4.02
1661 2165 7.094506 TGTCTATATACATCCGTATGTGGTGAC 60.095 40.741 3.56 5.93 45.99 3.67
1662 2166 3.746045 ATACATCCGTATGTGGTGACC 57.254 47.619 3.56 0.00 45.99 4.02
1663 2167 1.271856 ACATCCGTATGTGGTGACCA 58.728 50.000 0.00 0.00 44.79 4.02
1664 2168 1.837439 ACATCCGTATGTGGTGACCAT 59.163 47.619 7.94 0.00 44.79 3.55
1665 2169 2.238646 ACATCCGTATGTGGTGACCATT 59.761 45.455 7.94 0.86 44.79 3.16
1666 2170 3.278574 CATCCGTATGTGGTGACCATTT 58.721 45.455 7.94 0.45 35.28 2.32
1667 2171 4.080807 ACATCCGTATGTGGTGACCATTTA 60.081 41.667 7.94 0.00 44.79 1.40
1668 2172 4.554960 TCCGTATGTGGTGACCATTTAA 57.445 40.909 7.94 0.00 35.28 1.52
1669 2173 4.907809 TCCGTATGTGGTGACCATTTAAA 58.092 39.130 7.94 0.00 35.28 1.52
1670 2174 5.314529 TCCGTATGTGGTGACCATTTAAAA 58.685 37.500 7.94 0.00 35.28 1.52
1671 2175 5.946972 TCCGTATGTGGTGACCATTTAAAAT 59.053 36.000 7.94 0.00 35.28 1.82
1672 2176 6.094325 TCCGTATGTGGTGACCATTTAAAATC 59.906 38.462 7.94 0.00 35.28 2.17
1673 2177 6.094881 CCGTATGTGGTGACCATTTAAAATCT 59.905 38.462 7.94 0.00 35.28 2.40
1674 2178 7.186804 CGTATGTGGTGACCATTTAAAATCTC 58.813 38.462 7.94 0.00 35.28 2.75
1675 2179 7.065803 CGTATGTGGTGACCATTTAAAATCTCT 59.934 37.037 7.94 0.00 35.28 3.10
1676 2180 9.391006 GTATGTGGTGACCATTTAAAATCTCTA 57.609 33.333 7.94 0.00 35.28 2.43
1677 2181 7.921786 TGTGGTGACCATTTAAAATCTCTAG 57.078 36.000 7.94 0.00 35.28 2.43
1678 2182 7.685481 TGTGGTGACCATTTAAAATCTCTAGA 58.315 34.615 7.94 0.00 35.28 2.43
1679 2183 8.160765 TGTGGTGACCATTTAAAATCTCTAGAA 58.839 33.333 7.94 0.00 35.28 2.10
1680 2184 9.010029 GTGGTGACCATTTAAAATCTCTAGAAA 57.990 33.333 7.94 0.00 35.28 2.52
1681 2185 9.231297 TGGTGACCATTTAAAATCTCTAGAAAG 57.769 33.333 0.00 0.00 0.00 2.62
1682 2186 9.449719 GGTGACCATTTAAAATCTCTAGAAAGA 57.550 33.333 0.00 0.00 0.00 2.52
1699 2203 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
1700 2204 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
1701 2205 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
1702 2206 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
1703 2207 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
1704 2208 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
1705 2209 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
1706 2210 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
1707 2211 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
1746 2250 7.817962 TGCTCCTCTGTTTTATCAACTAGTAAC 59.182 37.037 0.00 0.00 0.00 2.50
1770 2274 8.641498 ACTTTTTATGGGATTATATCAGCTGG 57.359 34.615 15.13 0.00 0.00 4.85
1797 2305 8.565896 TCTATTTATAATGCGATGCTCCATTT 57.434 30.769 0.00 0.00 33.93 2.32
1817 2325 7.971168 TCCATTTGCGTAAACGATTCATATTTT 59.029 29.630 6.71 0.00 43.02 1.82
2263 2784 1.224069 CCACAGCGTTGACTCCAGTG 61.224 60.000 6.16 0.00 0.00 3.66
2304 2826 3.372206 GCTGCGAGTTGACTTCACATAAT 59.628 43.478 0.00 0.00 0.00 1.28
2305 2827 4.566759 GCTGCGAGTTGACTTCACATAATA 59.433 41.667 0.00 0.00 0.00 0.98
2306 2828 5.276584 GCTGCGAGTTGACTTCACATAATAG 60.277 44.000 0.00 0.00 0.00 1.73
2365 2887 2.156098 AGGCTGGCGATAAACGAAAAA 58.844 42.857 0.00 0.00 45.77 1.94
2419 2941 4.681483 GCAATTTTTAGCTCGAGCAGTTTT 59.319 37.500 36.87 19.82 45.16 2.43
2494 3069 5.720202 AGAAATGTCGTACATGCTGTAAGA 58.280 37.500 0.00 7.48 37.97 2.10
2683 3263 4.344102 TCAGACACTAGTAGCACCAAAAGT 59.656 41.667 0.00 0.00 0.00 2.66
2709 3289 2.497107 AAGTGCTCAAACATGTGTGC 57.503 45.000 11.46 7.23 38.26 4.57
2850 3430 8.292444 TGCTTTCAGGCACATAATATAAGTTT 57.708 30.769 0.00 0.00 37.29 2.66
2941 3521 3.243201 GCCTTGGATGTTTGCACTATAGC 60.243 47.826 0.00 0.00 0.00 2.97
2951 3531 0.601311 GCACTATAGCGCAAGGGGAG 60.601 60.000 11.47 0.00 38.28 4.30
2954 3534 1.689273 ACTATAGCGCAAGGGGAGAAG 59.311 52.381 11.47 0.00 38.28 2.85
2956 3536 1.428869 ATAGCGCAAGGGGAGAAGAT 58.571 50.000 11.47 0.00 38.28 2.40
2957 3537 1.204146 TAGCGCAAGGGGAGAAGATT 58.796 50.000 11.47 0.00 38.28 2.40
2978 3558 0.380378 TTTTCAGCGTGCTGTCAACC 59.620 50.000 20.33 0.00 43.96 3.77
2981 3561 2.591715 AGCGTGCTGTCAACCACC 60.592 61.111 0.00 0.00 0.00 4.61
3163 3749 6.854496 TTATGTGCGTATAATCTTGGTTCC 57.146 37.500 0.00 0.00 0.00 3.62
3188 3774 8.925700 CCTTTGTAATAACTTGAAATCTTTGGC 58.074 33.333 0.00 0.00 0.00 4.52
3191 3777 9.823647 TTGTAATAACTTGAAATCTTTGGCAAA 57.176 25.926 12.79 12.79 0.00 3.68
3192 3778 9.255304 TGTAATAACTTGAAATCTTTGGCAAAC 57.745 29.630 8.93 0.00 0.00 2.93
3193 3779 7.728847 AATAACTTGAAATCTTTGGCAAACC 57.271 32.000 8.93 0.00 0.00 3.27
3206 3792 0.527565 GCAAACCGATGCCTCACATT 59.472 50.000 0.00 0.00 39.84 2.71
3220 3806 4.213482 GCCTCACATTGTAACGAGTTCTTT 59.787 41.667 0.00 0.00 0.00 2.52
3225 3811 7.184106 TCACATTGTAACGAGTTCTTTTTGAC 58.816 34.615 0.00 0.00 0.00 3.18
3331 3917 1.556911 ACGGAGATCCTGTCAAGCAAT 59.443 47.619 0.00 0.00 0.00 3.56
3363 3949 2.556287 GTGGAGCAAAACGGCGAG 59.444 61.111 16.62 0.95 39.27 5.03
3406 3992 0.902531 TCCTAGGGCCGAGTTTCAAG 59.097 55.000 12.90 0.00 0.00 3.02
3643 4238 2.890474 GGCTACATGGACGCGGTG 60.890 66.667 12.47 6.28 0.00 4.94
3667 4262 1.001406 CTGAAAGACTGTCCGAAGGCT 59.999 52.381 3.76 0.00 44.13 4.58
3730 4325 2.769376 GTGAAATCGCCACATGTTACG 58.231 47.619 10.32 10.32 34.81 3.18
3733 4328 3.368539 TGAAATCGCCACATGTTACGTAC 59.631 43.478 14.89 7.53 0.00 3.67
3783 4381 6.371548 GTCAACCTGATAATCAACTTACAGCA 59.628 38.462 0.00 0.00 0.00 4.41
3784 4382 6.595326 TCAACCTGATAATCAACTTACAGCAG 59.405 38.462 0.00 0.00 0.00 4.24
3814 4413 1.737793 CGTGCCAACCTTCTTCCATAC 59.262 52.381 0.00 0.00 0.00 2.39
3983 4582 1.064463 ACGGCATGAACCAGGATCAAT 60.064 47.619 3.04 0.00 0.00 2.57
4058 4663 4.991056 CCACTGTATATCGTCCCAAATGAG 59.009 45.833 0.00 0.00 0.00 2.90
4059 4664 5.221441 CCACTGTATATCGTCCCAAATGAGA 60.221 44.000 0.00 0.00 0.00 3.27
4060 4665 6.459066 CACTGTATATCGTCCCAAATGAGAT 58.541 40.000 0.00 0.00 0.00 2.75
4165 4802 1.135046 CACGTCTCTGAGCAACACAG 58.865 55.000 0.00 0.00 36.80 3.66
4198 4835 1.949525 TGCTTCAGTTTCAGTTCCAGC 59.050 47.619 0.00 0.00 0.00 4.85
4319 4962 2.094182 GCGATGTCTTCACTTCCCAGTA 60.094 50.000 0.00 0.00 0.00 2.74
4323 4966 2.288825 TGTCTTCACTTCCCAGTAAGCG 60.289 50.000 0.00 0.00 0.00 4.68
4332 4975 3.343941 TCCCAGTAAGCGCATTTAACT 57.656 42.857 11.47 1.91 0.00 2.24
4333 4976 4.475051 TCCCAGTAAGCGCATTTAACTA 57.525 40.909 11.47 0.00 0.00 2.24
4347 4990 7.569591 GCGCATTTAACTATATTCACTCAGTCC 60.570 40.741 0.30 0.00 0.00 3.85
4352 4995 5.759506 ACTATATTCACTCAGTCCTGACG 57.240 43.478 0.00 0.00 35.46 4.35
4356 4999 2.271944 TCACTCAGTCCTGACGAAGA 57.728 50.000 8.37 1.15 35.46 2.87
4358 5001 1.201181 CACTCAGTCCTGACGAAGAGG 59.799 57.143 16.20 0.00 35.48 3.69
4361 5004 2.182030 GTCCTGACGAAGAGGCCG 59.818 66.667 0.00 0.00 0.00 6.13
4367 5010 1.143183 GACGAAGAGGCCGCCAATA 59.857 57.895 13.15 0.00 0.00 1.90
4373 5016 0.394352 AGAGGCCGCCAATAACCTTG 60.394 55.000 13.15 0.00 30.95 3.61
4374 5017 0.393808 GAGGCCGCCAATAACCTTGA 60.394 55.000 13.15 0.00 30.95 3.02
4400 5044 5.066505 CCAAAAGTAACTGCAGAAGTTCAGT 59.933 40.000 23.35 0.00 46.60 3.41
4403 5047 7.859325 AAAGTAACTGCAGAAGTTCAGTTAA 57.141 32.000 23.35 1.47 46.60 2.01
4423 5067 8.283291 CAGTTAAAATACGGAATTATGGAGCTC 58.717 37.037 4.71 4.71 0.00 4.09
4424 5068 5.924475 AAAATACGGAATTATGGAGCTCG 57.076 39.130 7.83 0.00 0.00 5.03
4425 5069 4.866508 AATACGGAATTATGGAGCTCGA 57.133 40.909 7.83 3.70 0.00 4.04
4436 5080 1.671901 GGAGCTCGACCCTCCAGAAG 61.672 65.000 18.16 0.00 46.51 2.85
4437 5081 0.968393 GAGCTCGACCCTCCAGAAGT 60.968 60.000 0.00 0.00 0.00 3.01
4438 5082 0.331954 AGCTCGACCCTCCAGAAGTA 59.668 55.000 0.00 0.00 0.00 2.24
4439 5083 0.456628 GCTCGACCCTCCAGAAGTAC 59.543 60.000 0.00 0.00 0.00 2.73
4440 5084 1.956159 GCTCGACCCTCCAGAAGTACT 60.956 57.143 0.00 0.00 0.00 2.73
4441 5085 2.683152 GCTCGACCCTCCAGAAGTACTA 60.683 54.545 0.00 0.00 0.00 1.82
4443 5087 2.575279 TCGACCCTCCAGAAGTACTACT 59.425 50.000 0.00 0.00 0.00 2.57
4445 5089 3.876320 CGACCCTCCAGAAGTACTACTAC 59.124 52.174 0.00 0.00 0.00 2.73
4446 5090 3.876320 GACCCTCCAGAAGTACTACTACG 59.124 52.174 0.00 0.00 0.00 3.51
4447 5091 2.617774 CCCTCCAGAAGTACTACTACGC 59.382 54.545 0.00 0.00 0.00 4.42
4448 5092 2.617774 CCTCCAGAAGTACTACTACGCC 59.382 54.545 0.00 0.00 0.00 5.68
4449 5093 2.617774 CTCCAGAAGTACTACTACGCCC 59.382 54.545 0.00 0.00 0.00 6.13
4451 5095 2.617774 CCAGAAGTACTACTACGCCCTC 59.382 54.545 0.00 0.00 0.00 4.30
4452 5096 3.543665 CAGAAGTACTACTACGCCCTCT 58.456 50.000 0.00 0.00 0.00 3.69
4455 5099 2.916640 AGTACTACTACGCCCTCTGTC 58.083 52.381 0.00 0.00 0.00 3.51
4459 5103 0.040058 TACTACGCCCTCTGTCCCAA 59.960 55.000 0.00 0.00 0.00 4.12
4460 5104 1.258445 ACTACGCCCTCTGTCCCAAG 61.258 60.000 0.00 0.00 0.00 3.61
4461 5105 0.970937 CTACGCCCTCTGTCCCAAGA 60.971 60.000 0.00 0.00 0.00 3.02
4462 5106 0.543410 TACGCCCTCTGTCCCAAGAA 60.543 55.000 0.00 0.00 0.00 2.52
4463 5107 1.078848 CGCCCTCTGTCCCAAGAAG 60.079 63.158 0.00 0.00 0.00 2.85
4465 5109 1.846712 GCCCTCTGTCCCAAGAAGCT 61.847 60.000 0.00 0.00 0.00 3.74
4466 5110 0.695347 CCCTCTGTCCCAAGAAGCTT 59.305 55.000 0.00 0.00 0.00 3.74
4469 5113 2.421619 CTCTGTCCCAAGAAGCTTGTC 58.578 52.381 2.10 0.00 0.00 3.18
4470 5114 2.038295 CTCTGTCCCAAGAAGCTTGTCT 59.962 50.000 2.10 0.00 0.00 3.41
4471 5115 2.439507 TCTGTCCCAAGAAGCTTGTCTT 59.560 45.455 2.10 0.00 38.41 3.01
4472 5116 3.646162 TCTGTCCCAAGAAGCTTGTCTTA 59.354 43.478 2.10 0.00 35.63 2.10
4474 5118 3.646162 TGTCCCAAGAAGCTTGTCTTAGA 59.354 43.478 2.10 0.00 35.63 2.10
4475 5119 4.287067 TGTCCCAAGAAGCTTGTCTTAGAT 59.713 41.667 2.10 0.00 35.63 1.98
4476 5120 5.221925 TGTCCCAAGAAGCTTGTCTTAGATT 60.222 40.000 2.10 0.00 35.63 2.40
4477 5121 5.707764 GTCCCAAGAAGCTTGTCTTAGATTT 59.292 40.000 2.10 0.00 35.63 2.17
4478 5122 6.879458 GTCCCAAGAAGCTTGTCTTAGATTTA 59.121 38.462 2.10 0.00 35.63 1.40
4479 5123 7.554476 GTCCCAAGAAGCTTGTCTTAGATTTAT 59.446 37.037 2.10 0.00 35.63 1.40
4481 5125 7.772757 CCCAAGAAGCTTGTCTTAGATTTATCT 59.227 37.037 2.10 0.00 35.63 1.98
4482 5126 9.823647 CCAAGAAGCTTGTCTTAGATTTATCTA 57.176 33.333 2.10 0.00 35.63 1.98
4488 5132 8.637986 AGCTTGTCTTAGATTTATCTAGACAGG 58.362 37.037 21.06 21.06 42.03 4.00
4499 5365 7.756395 TTTATCTAGACAGGGAGGTAATACG 57.244 40.000 0.00 0.00 0.00 3.06
4596 5462 3.440173 ACGCCAAGACAGGATAACAAATG 59.560 43.478 0.00 0.00 0.00 2.32
4670 5536 0.951040 GTGGTGGAGCCGTTCAGAAG 60.951 60.000 0.00 0.00 41.21 2.85
4672 5538 1.671742 GTGGAGCCGTTCAGAAGGA 59.328 57.895 4.33 0.00 0.00 3.36
4674 5540 0.321671 TGGAGCCGTTCAGAAGGAAG 59.678 55.000 4.33 0.00 35.82 3.46
4675 5541 0.608640 GGAGCCGTTCAGAAGGAAGA 59.391 55.000 4.33 0.00 35.82 2.87
4676 5542 1.404851 GGAGCCGTTCAGAAGGAAGAG 60.405 57.143 4.33 0.00 35.82 2.85
4677 5543 0.036858 AGCCGTTCAGAAGGAAGAGC 60.037 55.000 4.33 0.00 35.82 4.09
4678 5544 1.355066 GCCGTTCAGAAGGAAGAGCG 61.355 60.000 4.33 0.00 35.82 5.03
4719 5637 1.889454 CGGCAGAGAGAGCTGAAGT 59.111 57.895 0.00 0.00 40.83 3.01
4720 5638 0.458197 CGGCAGAGAGAGCTGAAGTG 60.458 60.000 0.00 0.00 40.83 3.16
4721 5639 0.740516 GGCAGAGAGAGCTGAAGTGC 60.741 60.000 0.00 0.00 38.14 4.40
4722 5640 0.037512 GCAGAGAGAGCTGAAGTGCA 60.038 55.000 0.00 0.00 38.14 4.57
4723 5641 1.607509 GCAGAGAGAGCTGAAGTGCAA 60.608 52.381 0.00 0.00 38.14 4.08
4724 5642 2.339418 CAGAGAGAGCTGAAGTGCAAG 58.661 52.381 0.00 0.00 38.14 4.01
4725 5643 1.969923 AGAGAGAGCTGAAGTGCAAGT 59.030 47.619 0.00 0.00 34.99 3.16
4726 5644 2.067766 GAGAGAGCTGAAGTGCAAGTG 58.932 52.381 0.00 0.00 34.99 3.16
4727 5645 1.690893 AGAGAGCTGAAGTGCAAGTGA 59.309 47.619 0.00 0.00 34.99 3.41
4728 5646 2.067766 GAGAGCTGAAGTGCAAGTGAG 58.932 52.381 0.00 0.00 34.99 3.51
4729 5647 1.690893 AGAGCTGAAGTGCAAGTGAGA 59.309 47.619 0.00 0.00 34.99 3.27
4730 5648 2.302445 AGAGCTGAAGTGCAAGTGAGAT 59.698 45.455 0.00 0.00 34.99 2.75
4731 5649 3.072944 GAGCTGAAGTGCAAGTGAGATT 58.927 45.455 0.00 0.00 34.99 2.40
4732 5650 2.812591 AGCTGAAGTGCAAGTGAGATTG 59.187 45.455 0.00 0.00 34.99 2.67
4733 5651 2.810274 GCTGAAGTGCAAGTGAGATTGA 59.190 45.455 0.00 0.00 31.55 2.57
4734 5652 3.120269 GCTGAAGTGCAAGTGAGATTGAG 60.120 47.826 0.00 0.00 31.55 3.02
4735 5653 3.405831 TGAAGTGCAAGTGAGATTGAGG 58.594 45.455 0.00 0.00 31.55 3.86
4736 5654 1.818642 AGTGCAAGTGAGATTGAGGC 58.181 50.000 0.00 0.00 31.55 4.70
4737 5655 1.072806 AGTGCAAGTGAGATTGAGGCA 59.927 47.619 0.00 0.00 31.55 4.75
4738 5656 1.198637 GTGCAAGTGAGATTGAGGCAC 59.801 52.381 0.00 0.00 42.54 5.01
4739 5657 3.132563 GTGCAAGTGAGATTGAGGCACT 61.133 50.000 0.00 0.00 44.80 4.40
4740 5658 1.467734 GCAAGTGAGATTGAGGCACTG 59.532 52.381 0.00 0.00 41.55 3.66
4741 5659 1.467734 CAAGTGAGATTGAGGCACTGC 59.532 52.381 0.00 0.00 41.55 4.40
4742 5660 0.689055 AGTGAGATTGAGGCACTGCA 59.311 50.000 2.82 0.00 41.55 4.41
4743 5661 0.801251 GTGAGATTGAGGCACTGCAC 59.199 55.000 2.82 0.00 41.55 4.57
4744 5662 0.689055 TGAGATTGAGGCACTGCACT 59.311 50.000 2.82 0.00 41.55 4.40
4745 5663 1.338484 TGAGATTGAGGCACTGCACTC 60.338 52.381 2.82 7.80 41.55 3.51
4746 5664 0.035630 AGATTGAGGCACTGCACTCC 60.036 55.000 13.72 0.00 41.55 3.85
4747 5665 0.321919 GATTGAGGCACTGCACTCCA 60.322 55.000 13.72 6.46 41.55 3.86
4748 5666 0.607489 ATTGAGGCACTGCACTCCAC 60.607 55.000 13.72 0.00 41.55 4.02
4749 5667 1.699054 TTGAGGCACTGCACTCCACT 61.699 55.000 13.72 0.00 41.55 4.00
4750 5668 1.072159 GAGGCACTGCACTCCACTT 59.928 57.895 2.82 0.00 41.55 3.16
4751 5669 1.228063 AGGCACTGCACTCCACTTG 60.228 57.895 2.82 0.00 37.18 3.16
4752 5670 1.227943 GGCACTGCACTCCACTTGA 60.228 57.895 2.82 0.00 0.00 3.02
4753 5671 1.510480 GGCACTGCACTCCACTTGAC 61.510 60.000 2.82 0.00 0.00 3.18
4754 5672 0.815213 GCACTGCACTCCACTTGACA 60.815 55.000 0.00 0.00 0.00 3.58
4755 5673 1.224075 CACTGCACTCCACTTGACAG 58.776 55.000 0.00 0.00 0.00 3.51
4756 5674 0.107456 ACTGCACTCCACTTGACAGG 59.893 55.000 0.00 0.00 0.00 4.00
4757 5675 1.227943 TGCACTCCACTTGACAGGC 60.228 57.895 0.00 0.00 0.00 4.85
4758 5676 1.227943 GCACTCCACTTGACAGGCA 60.228 57.895 0.00 0.00 0.00 4.75
4759 5677 1.233285 GCACTCCACTTGACAGGCAG 61.233 60.000 0.00 0.00 0.00 4.85
4760 5678 1.072159 ACTCCACTTGACAGGCAGC 59.928 57.895 0.00 0.00 0.00 5.25
4761 5679 1.071987 CTCCACTTGACAGGCAGCA 59.928 57.895 0.00 0.00 0.00 4.41
4762 5680 0.954449 CTCCACTTGACAGGCAGCAG 60.954 60.000 0.00 0.00 0.00 4.24
4763 5681 1.970114 CCACTTGACAGGCAGCAGG 60.970 63.158 0.00 0.00 0.00 4.85
4764 5682 1.228063 CACTTGACAGGCAGCAGGT 60.228 57.895 0.00 0.00 0.00 4.00
4765 5683 1.228063 ACTTGACAGGCAGCAGGTG 60.228 57.895 0.00 0.00 0.00 4.00
4766 5684 1.071987 CTTGACAGGCAGCAGGTGA 59.928 57.895 3.02 0.00 0.00 4.02
4767 5685 0.535780 CTTGACAGGCAGCAGGTGAA 60.536 55.000 3.02 0.00 0.00 3.18
4768 5686 0.535780 TTGACAGGCAGCAGGTGAAG 60.536 55.000 3.02 0.00 0.00 3.02
4954 5874 4.526970 AGTTGTGAGTCTGAATTGGTTGT 58.473 39.130 0.00 0.00 0.00 3.32
4981 5901 2.866762 GCAACTTCTTCAGACTTCACGT 59.133 45.455 0.00 0.00 0.00 4.49
4997 5917 4.732285 TCACGTTTCTCATCTTCAAAGC 57.268 40.909 0.00 0.00 0.00 3.51
4998 5918 4.126437 TCACGTTTCTCATCTTCAAAGCA 58.874 39.130 0.00 0.00 0.00 3.91
5038 5958 1.803555 GCTCAGTCTTGACAAAGAGGC 59.196 52.381 14.72 7.60 43.13 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.606889 AGTGGGAGGAGACGTCACC 60.607 63.158 22.82 22.82 32.55 4.02
1 2 0.894184 TCAGTGGGAGGAGACGTCAC 60.894 60.000 19.50 11.89 0.00 3.67
3 4 0.244178 GTTCAGTGGGAGGAGACGTC 59.756 60.000 7.70 7.70 0.00 4.34
4 5 0.469331 TGTTCAGTGGGAGGAGACGT 60.469 55.000 0.00 0.00 0.00 4.34
5 6 0.679505 TTGTTCAGTGGGAGGAGACG 59.320 55.000 0.00 0.00 0.00 4.18
6 7 2.569404 AGATTGTTCAGTGGGAGGAGAC 59.431 50.000 0.00 0.00 0.00 3.36
7 8 2.907892 AGATTGTTCAGTGGGAGGAGA 58.092 47.619 0.00 0.00 0.00 3.71
8 9 3.604582 GAAGATTGTTCAGTGGGAGGAG 58.395 50.000 0.00 0.00 0.00 3.69
9 10 2.028112 CGAAGATTGTTCAGTGGGAGGA 60.028 50.000 0.00 0.00 0.00 3.71
10 11 2.289694 ACGAAGATTGTTCAGTGGGAGG 60.290 50.000 0.00 0.00 0.00 4.30
11 12 2.996621 GACGAAGATTGTTCAGTGGGAG 59.003 50.000 0.00 0.00 0.00 4.30
12 13 2.609491 CGACGAAGATTGTTCAGTGGGA 60.609 50.000 0.00 0.00 0.00 4.37
13 14 1.726791 CGACGAAGATTGTTCAGTGGG 59.273 52.381 0.00 0.00 0.00 4.61
14 15 1.726791 CCGACGAAGATTGTTCAGTGG 59.273 52.381 0.00 0.00 0.00 4.00
15 16 2.672714 TCCGACGAAGATTGTTCAGTG 58.327 47.619 0.00 0.00 0.00 3.66
16 17 3.380479 TTCCGACGAAGATTGTTCAGT 57.620 42.857 0.00 0.00 0.00 3.41
17 18 3.679980 ACATTCCGACGAAGATTGTTCAG 59.320 43.478 0.00 0.00 0.00 3.02
18 19 3.659786 ACATTCCGACGAAGATTGTTCA 58.340 40.909 0.00 0.00 0.00 3.18
19 20 3.927142 AGACATTCCGACGAAGATTGTTC 59.073 43.478 0.00 0.00 30.25 3.18
20 21 3.679980 CAGACATTCCGACGAAGATTGTT 59.320 43.478 0.00 0.00 30.25 2.83
21 22 3.056821 TCAGACATTCCGACGAAGATTGT 60.057 43.478 0.00 0.00 32.17 2.71
22 23 3.511699 TCAGACATTCCGACGAAGATTG 58.488 45.455 0.00 0.00 0.00 2.67
23 24 3.868757 TCAGACATTCCGACGAAGATT 57.131 42.857 0.00 0.00 0.00 2.40
24 25 3.868757 TTCAGACATTCCGACGAAGAT 57.131 42.857 0.00 0.00 0.00 2.40
25 26 3.653539 TTTCAGACATTCCGACGAAGA 57.346 42.857 0.00 0.00 0.00 2.87
26 27 4.388773 TGAATTTCAGACATTCCGACGAAG 59.611 41.667 6.81 0.00 30.64 3.79
27 28 4.311606 TGAATTTCAGACATTCCGACGAA 58.688 39.130 6.81 0.00 30.64 3.85
28 29 3.920446 TGAATTTCAGACATTCCGACGA 58.080 40.909 6.81 0.00 30.64 4.20
29 30 4.388773 TCTTGAATTTCAGACATTCCGACG 59.611 41.667 6.81 0.00 30.64 5.12
30 31 5.862924 TCTTGAATTTCAGACATTCCGAC 57.137 39.130 6.81 0.00 30.64 4.79
31 32 6.875948 TTTCTTGAATTTCAGACATTCCGA 57.124 33.333 6.81 1.81 30.64 4.55
32 33 7.411157 GCATTTTCTTGAATTTCAGACATTCCG 60.411 37.037 6.81 0.00 30.64 4.30
33 34 7.411157 CGCATTTTCTTGAATTTCAGACATTCC 60.411 37.037 6.81 0.00 30.64 3.01
34 35 7.326789 TCGCATTTTCTTGAATTTCAGACATTC 59.673 33.333 2.70 2.70 0.00 2.67
35 36 7.147312 TCGCATTTTCTTGAATTTCAGACATT 58.853 30.769 0.00 0.00 0.00 2.71
36 37 6.680810 TCGCATTTTCTTGAATTTCAGACAT 58.319 32.000 0.00 0.00 0.00 3.06
37 38 6.070897 TCGCATTTTCTTGAATTTCAGACA 57.929 33.333 0.00 0.00 0.00 3.41
38 39 5.060200 GCTCGCATTTTCTTGAATTTCAGAC 59.940 40.000 0.00 0.00 0.00 3.51
39 40 5.156355 GCTCGCATTTTCTTGAATTTCAGA 58.844 37.500 0.00 0.00 0.00 3.27
40 41 4.919168 TGCTCGCATTTTCTTGAATTTCAG 59.081 37.500 0.00 0.00 0.00 3.02
41 42 4.681025 GTGCTCGCATTTTCTTGAATTTCA 59.319 37.500 0.00 0.00 0.00 2.69
42 43 4.090498 GGTGCTCGCATTTTCTTGAATTTC 59.910 41.667 0.00 0.00 0.00 2.17
43 44 3.989817 GGTGCTCGCATTTTCTTGAATTT 59.010 39.130 0.00 0.00 0.00 1.82
44 45 3.005684 TGGTGCTCGCATTTTCTTGAATT 59.994 39.130 0.00 0.00 0.00 2.17
45 46 2.557924 TGGTGCTCGCATTTTCTTGAAT 59.442 40.909 0.00 0.00 0.00 2.57
46 47 1.952990 TGGTGCTCGCATTTTCTTGAA 59.047 42.857 0.00 0.00 0.00 2.69
47 48 1.603456 TGGTGCTCGCATTTTCTTGA 58.397 45.000 0.00 0.00 0.00 3.02
48 49 2.420628 TTGGTGCTCGCATTTTCTTG 57.579 45.000 0.00 0.00 0.00 3.02
49 50 2.950433 CATTGGTGCTCGCATTTTCTT 58.050 42.857 0.00 0.00 0.00 2.52
50 51 2.642139 CATTGGTGCTCGCATTTTCT 57.358 45.000 0.00 0.00 0.00 2.52
62 63 4.853924 AAACTTAGACTTGGCATTGGTG 57.146 40.909 0.00 0.00 0.00 4.17
63 64 4.892934 TCAAAACTTAGACTTGGCATTGGT 59.107 37.500 0.00 0.00 0.00 3.67
64 65 5.452078 TCAAAACTTAGACTTGGCATTGG 57.548 39.130 0.00 0.00 0.00 3.16
65 66 6.198966 GTGTTCAAAACTTAGACTTGGCATTG 59.801 38.462 0.00 0.00 0.00 2.82
66 67 6.096846 AGTGTTCAAAACTTAGACTTGGCATT 59.903 34.615 0.00 0.00 0.00 3.56
67 68 5.594317 AGTGTTCAAAACTTAGACTTGGCAT 59.406 36.000 0.00 0.00 0.00 4.40
68 69 4.947388 AGTGTTCAAAACTTAGACTTGGCA 59.053 37.500 0.00 0.00 0.00 4.92
69 70 5.500645 AGTGTTCAAAACTTAGACTTGGC 57.499 39.130 0.00 0.00 0.00 4.52
70 71 7.254795 CCACTAGTGTTCAAAACTTAGACTTGG 60.255 40.741 21.18 0.00 0.00 3.61
71 72 7.254795 CCCACTAGTGTTCAAAACTTAGACTTG 60.255 40.741 21.18 0.00 0.00 3.16
72 73 6.766467 CCCACTAGTGTTCAAAACTTAGACTT 59.234 38.462 21.18 0.00 0.00 3.01
73 74 6.289064 CCCACTAGTGTTCAAAACTTAGACT 58.711 40.000 21.18 0.00 0.00 3.24
74 75 5.049612 GCCCACTAGTGTTCAAAACTTAGAC 60.050 44.000 21.18 0.00 0.00 2.59
75 76 5.061179 GCCCACTAGTGTTCAAAACTTAGA 58.939 41.667 21.18 0.00 0.00 2.10
76 77 5.063880 AGCCCACTAGTGTTCAAAACTTAG 58.936 41.667 21.18 1.61 0.00 2.18
77 78 5.043737 AGCCCACTAGTGTTCAAAACTTA 57.956 39.130 21.18 0.00 0.00 2.24
78 79 3.898482 AGCCCACTAGTGTTCAAAACTT 58.102 40.909 21.18 0.00 0.00 2.66
79 80 3.577805 AGCCCACTAGTGTTCAAAACT 57.422 42.857 21.18 5.15 0.00 2.66
91 92 2.827755 TGTGATGGAACTAGCCCACTA 58.172 47.619 6.61 0.00 36.36 2.74
92 93 1.656587 TGTGATGGAACTAGCCCACT 58.343 50.000 6.61 0.00 36.36 4.00
93 94 2.489938 TTGTGATGGAACTAGCCCAC 57.510 50.000 6.61 0.00 36.36 4.61
94 95 4.853468 TTATTGTGATGGAACTAGCCCA 57.147 40.909 6.89 6.89 38.19 5.36
95 96 5.193679 AGTTTATTGTGATGGAACTAGCCC 58.806 41.667 0.00 0.00 0.00 5.19
96 97 6.759497 AAGTTTATTGTGATGGAACTAGCC 57.241 37.500 0.00 0.00 30.91 3.93
97 98 8.182227 GGTTAAGTTTATTGTGATGGAACTAGC 58.818 37.037 0.00 0.00 30.91 3.42
98 99 9.226606 TGGTTAAGTTTATTGTGATGGAACTAG 57.773 33.333 0.00 0.00 30.91 2.57
99 100 9.747898 ATGGTTAAGTTTATTGTGATGGAACTA 57.252 29.630 0.00 0.00 30.91 2.24
100 101 8.650143 ATGGTTAAGTTTATTGTGATGGAACT 57.350 30.769 0.00 0.00 32.33 3.01
101 102 7.696453 CGATGGTTAAGTTTATTGTGATGGAAC 59.304 37.037 0.00 0.00 0.00 3.62
102 103 7.148154 CCGATGGTTAAGTTTATTGTGATGGAA 60.148 37.037 0.00 0.00 0.00 3.53
103 104 6.317642 CCGATGGTTAAGTTTATTGTGATGGA 59.682 38.462 0.00 0.00 0.00 3.41
104 105 6.317642 TCCGATGGTTAAGTTTATTGTGATGG 59.682 38.462 0.00 0.00 0.00 3.51
105 106 7.315247 TCCGATGGTTAAGTTTATTGTGATG 57.685 36.000 0.00 0.00 0.00 3.07
106 107 6.038271 GCTCCGATGGTTAAGTTTATTGTGAT 59.962 38.462 0.00 0.00 0.00 3.06
107 108 5.353123 GCTCCGATGGTTAAGTTTATTGTGA 59.647 40.000 0.00 0.00 0.00 3.58
108 109 5.354234 AGCTCCGATGGTTAAGTTTATTGTG 59.646 40.000 0.00 0.00 0.00 3.33
109 110 5.497474 AGCTCCGATGGTTAAGTTTATTGT 58.503 37.500 0.00 0.00 0.00 2.71
110 111 6.202954 CCTAGCTCCGATGGTTAAGTTTATTG 59.797 42.308 0.00 0.00 0.00 1.90
111 112 6.289064 CCTAGCTCCGATGGTTAAGTTTATT 58.711 40.000 0.00 0.00 0.00 1.40
112 113 5.221661 CCCTAGCTCCGATGGTTAAGTTTAT 60.222 44.000 0.00 0.00 0.00 1.40
113 114 4.100498 CCCTAGCTCCGATGGTTAAGTTTA 59.900 45.833 0.00 0.00 0.00 2.01
114 115 3.118371 CCCTAGCTCCGATGGTTAAGTTT 60.118 47.826 0.00 0.00 0.00 2.66
115 116 2.434702 CCCTAGCTCCGATGGTTAAGTT 59.565 50.000 0.00 0.00 0.00 2.66
116 117 2.040178 CCCTAGCTCCGATGGTTAAGT 58.960 52.381 0.00 0.00 0.00 2.24
117 118 2.040178 ACCCTAGCTCCGATGGTTAAG 58.960 52.381 0.00 0.00 0.00 1.85
118 119 2.170012 ACCCTAGCTCCGATGGTTAA 57.830 50.000 0.00 0.00 0.00 2.01
119 120 2.037144 GAACCCTAGCTCCGATGGTTA 58.963 52.381 0.00 0.00 39.32 2.85
120 121 0.831307 GAACCCTAGCTCCGATGGTT 59.169 55.000 0.00 0.00 41.81 3.67
121 122 1.049289 GGAACCCTAGCTCCGATGGT 61.049 60.000 0.00 0.00 0.00 3.55
122 123 0.760945 AGGAACCCTAGCTCCGATGG 60.761 60.000 0.00 0.00 36.78 3.51
123 124 0.676736 GAGGAACCCTAGCTCCGATG 59.323 60.000 0.00 0.00 36.78 3.84
124 125 0.558712 AGAGGAACCCTAGCTCCGAT 59.441 55.000 0.00 0.00 36.78 4.18
125 126 0.395862 CAGAGGAACCCTAGCTCCGA 60.396 60.000 0.00 0.00 36.78 4.55
126 127 2.022240 GCAGAGGAACCCTAGCTCCG 62.022 65.000 0.00 0.00 36.78 4.63
127 128 1.691195 GGCAGAGGAACCCTAGCTCC 61.691 65.000 0.00 0.00 35.79 4.70
128 129 0.689412 AGGCAGAGGAACCCTAGCTC 60.689 60.000 0.00 0.00 35.79 4.09
129 130 0.689412 GAGGCAGAGGAACCCTAGCT 60.689 60.000 0.00 0.00 35.79 3.32
130 131 1.691195 GGAGGCAGAGGAACCCTAGC 61.691 65.000 0.00 0.00 35.06 3.42
131 132 1.051556 GGGAGGCAGAGGAACCCTAG 61.052 65.000 0.00 0.00 37.75 3.02
132 133 1.003051 GGGAGGCAGAGGAACCCTA 59.997 63.158 0.00 0.00 37.75 3.53
133 134 2.285743 GGGAGGCAGAGGAACCCT 60.286 66.667 0.00 0.00 37.75 4.34
134 135 3.787001 CGGGAGGCAGAGGAACCC 61.787 72.222 0.00 0.00 37.42 4.11
135 136 4.475135 GCGGGAGGCAGAGGAACC 62.475 72.222 0.00 0.00 42.87 3.62
155 156 4.828925 GACGAGGCAGGCTGGAGC 62.829 72.222 17.64 0.97 41.14 4.70
156 157 3.073735 AGACGAGGCAGGCTGGAG 61.074 66.667 17.64 1.21 0.00 3.86
157 158 3.071206 GAGACGAGGCAGGCTGGA 61.071 66.667 17.64 0.00 0.00 3.86
158 159 4.154347 GGAGACGAGGCAGGCTGG 62.154 72.222 17.64 1.83 0.00 4.85
170 171 2.522193 CCTAGGGCCTCCGGAGAC 60.522 72.222 33.39 22.36 38.33 3.36
171 172 3.834056 CCCTAGGGCCTCCGGAGA 61.834 72.222 33.39 11.52 38.33 3.71
189 190 3.770040 TCCACCACGCCTCGATGG 61.770 66.667 1.14 1.14 42.13 3.51
190 191 2.509336 GTCCACCACGCCTCGATG 60.509 66.667 0.00 0.00 0.00 3.84
191 192 3.771160 GGTCCACCACGCCTCGAT 61.771 66.667 0.00 0.00 35.64 3.59
192 193 4.988716 AGGTCCACCACGCCTCGA 62.989 66.667 0.00 0.00 38.89 4.04
193 194 4.436998 GAGGTCCACCACGCCTCG 62.437 72.222 0.00 0.00 39.29 4.63
194 195 3.302347 CTGAGGTCCACCACGCCTC 62.302 68.421 0.00 0.00 46.61 4.70
195 196 3.314331 CTGAGGTCCACCACGCCT 61.314 66.667 0.00 0.00 38.89 5.52
198 199 2.469465 AATGGCTGAGGTCCACCACG 62.469 60.000 0.00 0.00 38.89 4.94
199 200 0.962356 CAATGGCTGAGGTCCACCAC 60.962 60.000 0.00 0.00 38.89 4.16
200 201 1.379916 CAATGGCTGAGGTCCACCA 59.620 57.895 0.00 0.00 38.89 4.17
201 202 2.048603 GCAATGGCTGAGGTCCACC 61.049 63.158 0.00 0.00 36.26 4.61
202 203 2.048603 GGCAATGGCTGAGGTCCAC 61.049 63.158 0.00 0.00 40.87 4.02
203 204 2.356278 GGCAATGGCTGAGGTCCA 59.644 61.111 0.00 0.00 40.87 4.02
222 223 0.919289 TGGAACAAGATCCCTCCCCC 60.919 60.000 0.00 0.00 38.82 5.40
241 242 9.665719 AAATGAACTCACAAAACACCTAAAAAT 57.334 25.926 0.00 0.00 0.00 1.82
278 280 2.229784 GGTTTTGTCTTCCTGAGCATGG 59.770 50.000 0.00 0.00 0.00 3.66
288 290 1.404035 AGTTGCCACGGTTTTGTCTTC 59.596 47.619 0.00 0.00 0.00 2.87
293 295 1.106944 AGGGAGTTGCCACGGTTTTG 61.107 55.000 0.00 0.00 38.95 2.44
294 296 0.475044 TAGGGAGTTGCCACGGTTTT 59.525 50.000 0.00 0.00 38.95 2.43
296 298 0.475044 TTTAGGGAGTTGCCACGGTT 59.525 50.000 0.00 0.00 38.95 4.44
297 299 0.036306 CTTTAGGGAGTTGCCACGGT 59.964 55.000 0.00 0.00 38.95 4.83
299 301 2.009774 CATCTTTAGGGAGTTGCCACG 58.990 52.381 0.00 0.00 38.95 4.94
305 307 6.394345 ACCTCATTTCATCTTTAGGGAGTT 57.606 37.500 0.00 0.00 0.00 3.01
306 308 6.012508 TGAACCTCATTTCATCTTTAGGGAGT 60.013 38.462 0.00 0.00 30.29 3.85
319 321 1.087501 GGCGGAGTGAACCTCATTTC 58.912 55.000 0.00 0.00 42.40 2.17
345 347 3.524541 GCTAAAGGCATCACCAAAATGG 58.475 45.455 0.00 0.00 43.14 3.16
357 359 0.454600 CTCCTACGACGCTAAAGGCA 59.545 55.000 0.00 0.00 41.91 4.75
362 364 2.475466 CGCCCTCCTACGACGCTAA 61.475 63.158 0.00 0.00 0.00 3.09
379 381 2.570181 GAGACGTACCCCCACACG 59.430 66.667 0.00 0.00 43.63 4.49
399 401 0.663568 CCGAATACCGCGAGATCCAC 60.664 60.000 8.23 0.00 36.84 4.02
407 409 1.293267 AACACCAACCGAATACCGCG 61.293 55.000 0.00 0.00 36.84 6.46
412 414 3.404899 GAAGACCAACACCAACCGAATA 58.595 45.455 0.00 0.00 0.00 1.75
418 420 0.661020 CACCGAAGACCAACACCAAC 59.339 55.000 0.00 0.00 0.00 3.77
420 422 1.147376 CCACCGAAGACCAACACCA 59.853 57.895 0.00 0.00 0.00 4.17
456 458 5.810525 ACACATGAACGAAGAAGAACAAAG 58.189 37.500 0.00 0.00 0.00 2.77
464 466 7.392494 AGAGTATAGACACATGAACGAAGAA 57.608 36.000 0.00 0.00 0.00 2.52
468 470 8.155510 ACCTATAGAGTATAGACACATGAACGA 58.844 37.037 0.00 0.00 40.43 3.85
469 471 8.325421 ACCTATAGAGTATAGACACATGAACG 57.675 38.462 0.00 0.00 40.43 3.95
470 472 9.900710 CAACCTATAGAGTATAGACACATGAAC 57.099 37.037 0.00 0.00 40.43 3.18
471 473 9.078990 CCAACCTATAGAGTATAGACACATGAA 57.921 37.037 0.00 0.00 40.43 2.57
472 474 8.445588 TCCAACCTATAGAGTATAGACACATGA 58.554 37.037 0.00 0.00 40.43 3.07
473 475 8.637196 TCCAACCTATAGAGTATAGACACATG 57.363 38.462 0.00 0.00 40.43 3.21
474 476 9.469097 GATCCAACCTATAGAGTATAGACACAT 57.531 37.037 0.00 0.00 40.43 3.21
475 477 8.445588 TGATCCAACCTATAGAGTATAGACACA 58.554 37.037 0.00 0.00 40.43 3.72
476 478 8.865420 TGATCCAACCTATAGAGTATAGACAC 57.135 38.462 0.00 0.00 40.43 3.67
505 507 9.770097 GTCAATGAAGAGAAATATGGTAGATCA 57.230 33.333 0.00 0.00 0.00 2.92
513 515 5.520288 ACCGTCGTCAATGAAGAGAAATATG 59.480 40.000 0.00 0.00 0.00 1.78
515 517 5.068234 ACCGTCGTCAATGAAGAGAAATA 57.932 39.130 0.00 0.00 0.00 1.40
528 530 0.240145 CAGAGTAGCAACCGTCGTCA 59.760 55.000 0.00 0.00 0.00 4.35
540 542 1.478510 AGGACCAACGCATCAGAGTAG 59.521 52.381 0.00 0.00 0.00 2.57
542 544 0.036952 CAGGACCAACGCATCAGAGT 60.037 55.000 0.00 0.00 0.00 3.24
543 545 0.036952 ACAGGACCAACGCATCAGAG 60.037 55.000 0.00 0.00 0.00 3.35
559 561 3.627395 TGTTATGCTAAGGTCCCACAG 57.373 47.619 0.00 0.00 0.00 3.66
561 563 4.423625 AGATGTTATGCTAAGGTCCCAC 57.576 45.455 0.00 0.00 0.00 4.61
566 568 5.370880 AGATGGGAAGATGTTATGCTAAGGT 59.629 40.000 0.00 0.00 0.00 3.50
575 577 2.575735 TGCACCAGATGGGAAGATGTTA 59.424 45.455 3.48 0.00 41.15 2.41
578 580 1.747355 GTTGCACCAGATGGGAAGATG 59.253 52.381 3.48 0.00 41.15 2.90
579 581 1.355381 TGTTGCACCAGATGGGAAGAT 59.645 47.619 3.48 0.00 41.15 2.40
580 582 0.770499 TGTTGCACCAGATGGGAAGA 59.230 50.000 3.48 0.00 41.15 2.87
585 587 2.546373 CCAAACTTGTTGCACCAGATGG 60.546 50.000 0.00 0.00 42.17 3.51
588 590 1.846007 ACCAAACTTGTTGCACCAGA 58.154 45.000 0.00 0.00 0.00 3.86
592 594 1.555477 CCGAACCAAACTTGTTGCAC 58.445 50.000 0.00 0.00 0.00 4.57
607 613 1.409802 CCCTACCTCACTAGAGCCGAA 60.410 57.143 0.00 0.00 40.68 4.30
608 614 0.183014 CCCTACCTCACTAGAGCCGA 59.817 60.000 0.00 0.00 40.68 5.54
615 621 3.470709 CGTAATCGTCCCTACCTCACTA 58.529 50.000 0.00 0.00 0.00 2.74
616 622 2.295885 CGTAATCGTCCCTACCTCACT 58.704 52.381 0.00 0.00 0.00 3.41
623 629 1.447317 GACCGCCGTAATCGTCCCTA 61.447 60.000 0.00 0.00 35.01 3.53
668 674 1.137086 CCTAGCGACAACTACCAGCAT 59.863 52.381 0.00 0.00 0.00 3.79
671 677 1.135083 CCACCTAGCGACAACTACCAG 60.135 57.143 0.00 0.00 0.00 4.00
673 679 0.893447 ACCACCTAGCGACAACTACC 59.107 55.000 0.00 0.00 0.00 3.18
674 680 2.738013 AACCACCTAGCGACAACTAC 57.262 50.000 0.00 0.00 0.00 2.73
679 685 3.472283 TTTGTAAACCACCTAGCGACA 57.528 42.857 0.00 0.00 0.00 4.35
684 690 9.621629 TTACATCCATATTTGTAAACCACCTAG 57.378 33.333 0.00 0.00 35.86 3.02
749 755 7.761409 TCAAGAAAACCTCCGATTTATTCATG 58.239 34.615 0.00 0.00 0.00 3.07
861 877 3.410631 TGCCGAGTATTTTGGACAAGA 57.589 42.857 0.00 0.00 31.06 3.02
864 880 2.852449 TGTTGCCGAGTATTTTGGACA 58.148 42.857 0.00 0.00 31.06 4.02
889 916 2.441348 TCGCGGGCTCCAGTGATA 60.441 61.111 6.13 0.00 0.00 2.15
940 975 2.441168 GATCGATCGACCGACCCGTC 62.441 65.000 22.06 7.68 41.70 4.79
941 976 2.515523 ATCGATCGACCGACCCGT 60.516 61.111 22.06 0.00 41.70 5.28
942 977 2.251667 GATCGATCGACCGACCCG 59.748 66.667 22.06 8.89 41.70 5.28
948 983 0.455295 GAGATGCGGATCGATCGACC 60.455 60.000 22.06 20.92 33.34 4.79
949 984 0.455295 GGAGATGCGGATCGATCGAC 60.455 60.000 22.06 14.00 33.34 4.20
971 1006 2.180973 TGGAGATAGCTTGGAGGGAGAT 59.819 50.000 0.00 0.00 0.00 2.75
973 1008 2.094100 TGGAGATAGCTTGGAGGGAG 57.906 55.000 0.00 0.00 0.00 4.30
974 1009 2.119495 GTTGGAGATAGCTTGGAGGGA 58.881 52.381 0.00 0.00 0.00 4.20
975 1010 2.103941 GAGTTGGAGATAGCTTGGAGGG 59.896 54.545 0.00 0.00 0.00 4.30
976 1011 2.103941 GGAGTTGGAGATAGCTTGGAGG 59.896 54.545 0.00 0.00 0.00 4.30
977 1012 3.037549 AGGAGTTGGAGATAGCTTGGAG 58.962 50.000 0.00 0.00 0.00 3.86
978 1013 3.034635 GAGGAGTTGGAGATAGCTTGGA 58.965 50.000 0.00 0.00 0.00 3.53
979 1014 2.103941 GGAGGAGTTGGAGATAGCTTGG 59.896 54.545 0.00 0.00 0.00 3.61
980 1015 2.223923 CGGAGGAGTTGGAGATAGCTTG 60.224 54.545 0.00 0.00 0.00 4.01
981 1016 2.035632 CGGAGGAGTTGGAGATAGCTT 58.964 52.381 0.00 0.00 0.00 3.74
982 1017 1.698506 CGGAGGAGTTGGAGATAGCT 58.301 55.000 0.00 0.00 0.00 3.32
983 1018 0.032815 GCGGAGGAGTTGGAGATAGC 59.967 60.000 0.00 0.00 0.00 2.97
984 1019 0.676736 GGCGGAGGAGTTGGAGATAG 59.323 60.000 0.00 0.00 0.00 2.08
985 1020 0.759436 GGGCGGAGGAGTTGGAGATA 60.759 60.000 0.00 0.00 0.00 1.98
1358 1861 2.582498 CCGTCGGCCATCTCGAAC 60.582 66.667 2.24 0.00 38.42 3.95
1515 2019 2.654749 TGGAGAAGCAGTGTACATCG 57.345 50.000 0.00 0.00 0.00 3.84
1524 2028 3.037549 AGGGAGTAGATTGGAGAAGCAG 58.962 50.000 0.00 0.00 0.00 4.24
1540 2044 5.609533 TTTAGATTTAGGAACGGAGGGAG 57.390 43.478 0.00 0.00 0.00 4.30
1541 2045 6.842807 ACTATTTAGATTTAGGAACGGAGGGA 59.157 38.462 0.00 0.00 0.00 4.20
1542 2046 7.063934 ACTATTTAGATTTAGGAACGGAGGG 57.936 40.000 0.00 0.00 0.00 4.30
1543 2047 7.985752 ACAACTATTTAGATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
1544 2048 8.943909 ACAACTATTTAGATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
1545 2049 8.755977 AGACAACTATTTAGATTTAGGAACGGA 58.244 33.333 0.00 0.00 0.00 4.69
1546 2050 8.943909 AGACAACTATTTAGATTTAGGAACGG 57.056 34.615 0.00 0.00 0.00 4.44
1560 2064 9.847224 TTGAAACCTCTAGAAAGACAACTATTT 57.153 29.630 0.00 0.00 0.00 1.40
1561 2065 9.847224 TTTGAAACCTCTAGAAAGACAACTATT 57.153 29.630 0.00 0.00 0.00 1.73
1563 2067 9.273016 CATTTGAAACCTCTAGAAAGACAACTA 57.727 33.333 0.00 0.00 0.00 2.24
1564 2068 7.993183 TCATTTGAAACCTCTAGAAAGACAACT 59.007 33.333 0.00 0.00 0.00 3.16
1565 2069 8.154649 TCATTTGAAACCTCTAGAAAGACAAC 57.845 34.615 0.00 0.00 0.00 3.32
1566 2070 8.786898 CATCATTTGAAACCTCTAGAAAGACAA 58.213 33.333 0.00 0.00 0.00 3.18
1567 2071 8.156820 TCATCATTTGAAACCTCTAGAAAGACA 58.843 33.333 0.00 0.00 0.00 3.41
1568 2072 8.447053 GTCATCATTTGAAACCTCTAGAAAGAC 58.553 37.037 0.00 0.00 35.70 3.01
1569 2073 8.378565 AGTCATCATTTGAAACCTCTAGAAAGA 58.621 33.333 0.00 0.00 35.70 2.52
1570 2074 8.558973 AGTCATCATTTGAAACCTCTAGAAAG 57.441 34.615 0.00 0.00 35.70 2.62
1571 2075 9.436957 GTAGTCATCATTTGAAACCTCTAGAAA 57.563 33.333 0.00 0.00 35.70 2.52
1572 2076 8.593679 TGTAGTCATCATTTGAAACCTCTAGAA 58.406 33.333 0.00 0.00 35.70 2.10
1573 2077 8.134202 TGTAGTCATCATTTGAAACCTCTAGA 57.866 34.615 0.00 0.00 35.70 2.43
1574 2078 8.954950 ATGTAGTCATCATTTGAAACCTCTAG 57.045 34.615 0.00 0.00 35.70 2.43
1575 2079 9.817809 GTATGTAGTCATCATTTGAAACCTCTA 57.182 33.333 0.00 0.00 35.70 2.43
1576 2080 7.492669 CGTATGTAGTCATCATTTGAAACCTCT 59.507 37.037 0.00 0.00 35.70 3.69
1577 2081 7.277981 ACGTATGTAGTCATCATTTGAAACCTC 59.722 37.037 0.00 0.00 35.70 3.85
1578 2082 7.103641 ACGTATGTAGTCATCATTTGAAACCT 58.896 34.615 0.00 0.00 35.70 3.50
1579 2083 7.303634 ACGTATGTAGTCATCATTTGAAACC 57.696 36.000 0.00 0.00 35.70 3.27
1595 2099 7.979537 AGATTCACTCATTTTGCTACGTATGTA 59.020 33.333 0.00 0.00 0.00 2.29
1596 2100 6.818644 AGATTCACTCATTTTGCTACGTATGT 59.181 34.615 0.00 0.00 0.00 2.29
1597 2101 7.239166 AGATTCACTCATTTTGCTACGTATG 57.761 36.000 0.00 0.00 0.00 2.39
1598 2102 7.979537 TGTAGATTCACTCATTTTGCTACGTAT 59.020 33.333 0.00 0.00 31.97 3.06
1599 2103 7.274904 GTGTAGATTCACTCATTTTGCTACGTA 59.725 37.037 0.00 0.00 35.68 3.57
1600 2104 6.090898 GTGTAGATTCACTCATTTTGCTACGT 59.909 38.462 0.00 0.00 35.68 3.57
1601 2105 6.311445 AGTGTAGATTCACTCATTTTGCTACG 59.689 38.462 0.00 0.00 44.07 3.51
1602 2106 7.602517 AGTGTAGATTCACTCATTTTGCTAC 57.397 36.000 0.00 0.00 44.07 3.58
1632 2136 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
1633 2137 8.899771 CACCACATACGGATGTATATAGACATA 58.100 37.037 14.23 0.00 44.82 2.29
1634 2138 7.614192 TCACCACATACGGATGTATATAGACAT 59.386 37.037 14.23 12.70 44.82 3.06
1635 2139 6.943718 TCACCACATACGGATGTATATAGACA 59.056 38.462 14.23 2.07 44.82 3.41
1636 2140 7.249147 GTCACCACATACGGATGTATATAGAC 58.751 42.308 14.23 12.97 44.82 2.59
1637 2141 6.376299 GGTCACCACATACGGATGTATATAGA 59.624 42.308 14.23 4.80 44.82 1.98
1638 2142 6.152154 TGGTCACCACATACGGATGTATATAG 59.848 42.308 14.23 0.00 44.82 1.31
1639 2143 6.011481 TGGTCACCACATACGGATGTATATA 58.989 40.000 14.23 0.00 44.82 0.86
1640 2144 4.836175 TGGTCACCACATACGGATGTATAT 59.164 41.667 14.23 0.00 44.82 0.86
1641 2145 4.216708 TGGTCACCACATACGGATGTATA 58.783 43.478 14.23 0.00 44.82 1.47
1642 2146 3.035363 TGGTCACCACATACGGATGTAT 58.965 45.455 14.23 1.38 44.82 2.29
1643 2147 2.458620 TGGTCACCACATACGGATGTA 58.541 47.619 14.23 0.00 44.82 2.29
1645 2149 2.620251 ATGGTCACCACATACGGATG 57.380 50.000 5.94 5.94 35.80 3.51
1646 2150 3.644966 AAATGGTCACCACATACGGAT 57.355 42.857 0.00 0.00 35.80 4.18
1647 2151 4.554960 TTAAATGGTCACCACATACGGA 57.445 40.909 0.00 0.00 35.80 4.69
1648 2152 5.630661 TTTTAAATGGTCACCACATACGG 57.369 39.130 0.00 0.00 35.80 4.02
1649 2153 7.065803 AGAGATTTTAAATGGTCACCACATACG 59.934 37.037 0.00 0.00 35.80 3.06
1650 2154 8.281212 AGAGATTTTAAATGGTCACCACATAC 57.719 34.615 0.00 0.00 35.80 2.39
1651 2155 9.613428 CTAGAGATTTTAAATGGTCACCACATA 57.387 33.333 0.00 0.00 35.80 2.29
1652 2156 8.328758 TCTAGAGATTTTAAATGGTCACCACAT 58.671 33.333 0.00 0.00 35.80 3.21
1653 2157 7.685481 TCTAGAGATTTTAAATGGTCACCACA 58.315 34.615 0.00 0.00 35.80 4.17
1654 2158 8.561738 TTCTAGAGATTTTAAATGGTCACCAC 57.438 34.615 0.00 0.00 35.80 4.16
1655 2159 9.231297 CTTTCTAGAGATTTTAAATGGTCACCA 57.769 33.333 0.00 0.00 38.19 4.17
1656 2160 9.449719 TCTTTCTAGAGATTTTAAATGGTCACC 57.550 33.333 0.00 0.00 0.00 4.02
1673 2177 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
1674 2178 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
1675 2179 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
1676 2180 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
1677 2181 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
1678 2182 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
1679 2183 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
1680 2184 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
1681 2185 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
1682 2186 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
1683 2187 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
1684 2188 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
1685 2189 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
1686 2190 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
1687 2191 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
1688 2192 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
1689 2193 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
1690 2194 3.053095 ACATCTACTCCCTCCGTTCCTAA 60.053 47.826 0.00 0.00 0.00 2.69
1691 2195 2.512896 ACATCTACTCCCTCCGTTCCTA 59.487 50.000 0.00 0.00 0.00 2.94
1692 2196 1.288335 ACATCTACTCCCTCCGTTCCT 59.712 52.381 0.00 0.00 0.00 3.36
1693 2197 1.409427 CACATCTACTCCCTCCGTTCC 59.591 57.143 0.00 0.00 0.00 3.62
1694 2198 2.099427 GTCACATCTACTCCCTCCGTTC 59.901 54.545 0.00 0.00 0.00 3.95
1695 2199 2.100989 GTCACATCTACTCCCTCCGTT 58.899 52.381 0.00 0.00 0.00 4.44
1696 2200 1.765230 GTCACATCTACTCCCTCCGT 58.235 55.000 0.00 0.00 0.00 4.69
1697 2201 0.663688 CGTCACATCTACTCCCTCCG 59.336 60.000 0.00 0.00 0.00 4.63
1698 2202 1.950909 CTCGTCACATCTACTCCCTCC 59.049 57.143 0.00 0.00 0.00 4.30
1699 2203 1.335496 GCTCGTCACATCTACTCCCTC 59.665 57.143 0.00 0.00 0.00 4.30
1700 2204 1.064314 AGCTCGTCACATCTACTCCCT 60.064 52.381 0.00 0.00 0.00 4.20
1701 2205 1.066303 CAGCTCGTCACATCTACTCCC 59.934 57.143 0.00 0.00 0.00 4.30
1702 2206 1.535015 GCAGCTCGTCACATCTACTCC 60.535 57.143 0.00 0.00 0.00 3.85
1703 2207 1.403679 AGCAGCTCGTCACATCTACTC 59.596 52.381 0.00 0.00 0.00 2.59
1704 2208 1.403679 GAGCAGCTCGTCACATCTACT 59.596 52.381 6.67 0.00 0.00 2.57
1705 2209 1.535015 GGAGCAGCTCGTCACATCTAC 60.535 57.143 16.47 0.00 0.00 2.59
1706 2210 0.741326 GGAGCAGCTCGTCACATCTA 59.259 55.000 16.47 0.00 0.00 1.98
1707 2211 0.969917 AGGAGCAGCTCGTCACATCT 60.970 55.000 16.47 2.84 0.00 2.90
1746 2250 8.641498 ACCAGCTGATATAATCCCATAAAAAG 57.359 34.615 17.39 0.00 0.00 2.27
1770 2274 7.364522 TGGAGCATCGCATTATAAATAGAAC 57.635 36.000 0.00 0.00 34.37 3.01
1797 2305 6.832804 TCACAAAATATGAATCGTTTACGCA 58.167 32.000 0.00 0.00 39.60 5.24
1817 2325 5.764686 GCCCTATTATCACATGTTCATCACA 59.235 40.000 0.00 0.00 40.71 3.58
1987 2499 7.334090 CCAAGAATGTAGGAGAAGAAGATCAA 58.666 38.462 0.00 0.00 0.00 2.57
1988 2502 6.631314 GCCAAGAATGTAGGAGAAGAAGATCA 60.631 42.308 0.00 0.00 0.00 2.92
2213 2728 4.501714 CATGCCGTGCCATGCCAC 62.502 66.667 0.00 0.00 36.52 5.01
2263 2784 0.877071 CTGCATATCGGATGCCAACC 59.123 55.000 17.17 0.00 43.94 3.77
2304 2826 5.467738 AGTGAGATCCATCCATTACCACTA 58.532 41.667 0.00 0.00 31.49 2.74
2305 2827 4.302067 AGTGAGATCCATCCATTACCACT 58.698 43.478 0.00 0.00 0.00 4.00
2306 2828 4.696479 AGTGAGATCCATCCATTACCAC 57.304 45.455 0.00 0.00 0.00 4.16
2400 2922 6.427150 CACTAAAAACTGCTCGAGCTAAAAA 58.573 36.000 35.27 16.10 42.66 1.94
2404 2926 2.993899 GCACTAAAAACTGCTCGAGCTA 59.006 45.455 35.27 21.41 42.66 3.32
2405 2927 1.801178 GCACTAAAAACTGCTCGAGCT 59.199 47.619 35.27 18.41 42.66 4.09
2406 2928 1.135944 GGCACTAAAAACTGCTCGAGC 60.136 52.381 30.42 30.42 42.50 5.03
2407 2929 2.417719 AGGCACTAAAAACTGCTCGAG 58.582 47.619 8.45 8.45 36.02 4.04
2409 2931 2.548057 TGAAGGCACTAAAAACTGCTCG 59.452 45.455 0.00 0.00 38.49 5.03
2419 2941 7.042051 GCGAATGAGTATATTTGAAGGCACTAA 60.042 37.037 0.00 0.00 38.49 2.24
2509 3084 2.414481 CCAGAAATGTCAGCGTGAGAAG 59.586 50.000 0.00 0.00 0.00 2.85
2514 3089 0.806868 ATGCCAGAAATGTCAGCGTG 59.193 50.000 0.00 0.00 0.00 5.34
2515 3090 0.806868 CATGCCAGAAATGTCAGCGT 59.193 50.000 0.00 0.00 0.00 5.07
2634 3214 6.404623 CCAAAGATCGATTGTTATTCAGCCAA 60.405 38.462 0.00 0.00 0.00 4.52
2635 3215 5.066375 CCAAAGATCGATTGTTATTCAGCCA 59.934 40.000 0.00 0.00 0.00 4.75
2636 3216 5.066505 ACCAAAGATCGATTGTTATTCAGCC 59.933 40.000 0.00 0.00 0.00 4.85
2683 3263 5.105797 ACACATGTTTGAGCACTTTCAGAAA 60.106 36.000 0.00 0.00 0.00 2.52
2709 3289 3.130869 TGCCTGCATAAATAACAAGCCAG 59.869 43.478 0.00 0.00 0.00 4.85
2850 3430 3.007506 TCTCTATTTGAAACTGCCGTGGA 59.992 43.478 0.00 0.00 0.00 4.02
2941 3521 1.826385 AACAATCTTCTCCCCTTGCG 58.174 50.000 0.00 0.00 0.00 4.85
2951 3531 2.975851 CAGCACGCTGAAAACAATCTTC 59.024 45.455 13.87 0.00 46.30 2.87
2954 3534 2.286950 TGACAGCACGCTGAAAACAATC 60.287 45.455 25.09 10.74 46.30 2.67
2956 3536 1.090728 TGACAGCACGCTGAAAACAA 58.909 45.000 25.09 1.68 46.30 2.83
2957 3537 1.090728 TTGACAGCACGCTGAAAACA 58.909 45.000 25.09 15.00 46.30 2.83
2978 3558 2.359478 GGTTGCGTACCCCAGGTG 60.359 66.667 0.00 0.00 41.43 4.00
3001 3587 6.075762 TGGAATTTGACAGACATTGTTGAG 57.924 37.500 0.00 0.00 41.05 3.02
3101 3687 2.485479 CCCCATCCACCTGTATTTCTCG 60.485 54.545 0.00 0.00 0.00 4.04
3163 3749 9.474920 TGCCAAAGATTTCAAGTTATTACAAAG 57.525 29.630 0.00 0.00 0.00 2.77
3188 3774 1.541147 ACAATGTGAGGCATCGGTTTG 59.459 47.619 0.00 0.00 36.67 2.93
3191 3777 2.356135 GTTACAATGTGAGGCATCGGT 58.644 47.619 0.00 0.00 36.67 4.69
3192 3778 1.327460 CGTTACAATGTGAGGCATCGG 59.673 52.381 0.00 0.00 36.67 4.18
3193 3779 2.267426 TCGTTACAATGTGAGGCATCG 58.733 47.619 0.00 0.00 36.67 3.84
3206 3792 6.202188 GGATCAGTCAAAAAGAACTCGTTACA 59.798 38.462 0.00 0.00 0.00 2.41
3220 3806 1.280133 CAGAGCCTGGGATCAGTCAAA 59.720 52.381 7.64 0.00 39.31 2.69
3331 3917 1.753078 CCACGATGGGAGTCTCGGA 60.753 63.158 5.41 0.00 39.16 4.55
3363 3949 1.476891 TGATAAGAGCACACCCGAGAC 59.523 52.381 0.00 0.00 0.00 3.36
3474 4060 3.869272 GCTGCCATGGCGTTCTCG 61.869 66.667 30.87 15.32 45.51 4.04
3568 4155 3.067461 TCGCACAAATTAAACCAGCACTT 59.933 39.130 0.00 0.00 0.00 3.16
3643 4238 4.425520 CCTTCGGACAGTCTTTCAGTATC 58.574 47.826 0.00 0.00 0.00 2.24
3667 4262 1.171308 GCAGCAGAGCCAAAAGATCA 58.829 50.000 0.00 0.00 31.44 2.92
3733 4328 1.256812 AAAAATGGCCGACCTTGAGG 58.743 50.000 0.00 0.00 42.17 3.86
3769 4367 6.265577 GTGTTTGAACTGCTGTAAGTTGATT 58.734 36.000 0.00 0.00 40.48 2.57
3770 4368 5.221048 GGTGTTTGAACTGCTGTAAGTTGAT 60.221 40.000 0.00 0.00 40.48 2.57
3771 4369 4.095782 GGTGTTTGAACTGCTGTAAGTTGA 59.904 41.667 0.00 0.00 40.48 3.18
3783 4381 0.454196 GTTGGCACGGTGTTTGAACT 59.546 50.000 10.24 0.00 0.00 3.01
3784 4382 0.526739 GGTTGGCACGGTGTTTGAAC 60.527 55.000 10.24 7.41 0.00 3.18
3841 4440 5.284861 TCACCTGCAAAGTCAAACTAGTA 57.715 39.130 0.00 0.00 0.00 1.82
3845 4444 4.202151 GGATTTCACCTGCAAAGTCAAACT 60.202 41.667 0.00 0.00 0.00 2.66
4046 4651 4.229096 CACAAACAATCTCATTTGGGACG 58.771 43.478 0.00 0.00 40.93 4.79
4058 4663 8.981647 AGAATAAAGCAATTGACACAAACAATC 58.018 29.630 10.34 0.00 37.04 2.67
4059 4664 8.891671 AGAATAAAGCAATTGACACAAACAAT 57.108 26.923 10.34 0.00 39.25 2.71
4060 4665 8.602328 CAAGAATAAAGCAATTGACACAAACAA 58.398 29.630 10.34 0.00 0.00 2.83
4119 4756 9.003658 TGACCTTTTCTTGAGAGAATATTGTTC 57.996 33.333 0.00 0.00 41.35 3.18
4125 4762 5.926542 CGTGTGACCTTTTCTTGAGAGAATA 59.073 40.000 0.00 0.00 41.35 1.75
4131 4768 3.458189 AGACGTGTGACCTTTTCTTGAG 58.542 45.455 0.00 0.00 0.00 3.02
4165 4802 0.880278 TGAAGCAAGACGAGGCACAC 60.880 55.000 0.00 0.00 0.00 3.82
4198 4835 0.689412 ACAGTTTGGGTTGGTTGGGG 60.689 55.000 0.00 0.00 0.00 4.96
4319 4962 7.495934 ACTGAGTGAATATAGTTAAATGCGCTT 59.504 33.333 9.73 0.00 0.00 4.68
4323 4966 8.768955 CAGGACTGAGTGAATATAGTTAAATGC 58.231 37.037 0.00 0.00 0.00 3.56
4332 4975 6.120220 TCTTCGTCAGGACTGAGTGAATATA 58.880 40.000 13.90 4.74 40.75 0.86
4333 4976 4.950475 TCTTCGTCAGGACTGAGTGAATAT 59.050 41.667 13.90 0.00 40.75 1.28
4347 4990 2.859273 ATTGGCGGCCTCTTCGTCAG 62.859 60.000 21.46 0.00 43.18 3.51
4352 4995 0.107165 AGGTTATTGGCGGCCTCTTC 60.107 55.000 21.46 6.88 0.00 2.87
4356 4999 0.258774 ATCAAGGTTATTGGCGGCCT 59.741 50.000 21.46 2.87 0.00 5.19
4358 5001 0.668535 GGATCAAGGTTATTGGCGGC 59.331 55.000 0.00 0.00 0.00 6.53
4361 5004 5.405935 ACTTTTGGATCAAGGTTATTGGC 57.594 39.130 0.00 0.00 0.00 4.52
4367 5010 4.892934 TGCAGTTACTTTTGGATCAAGGTT 59.107 37.500 0.00 0.00 0.00 3.50
4373 5016 5.948992 ACTTCTGCAGTTACTTTTGGATC 57.051 39.130 14.67 0.00 27.32 3.36
4374 5017 5.827797 TGAACTTCTGCAGTTACTTTTGGAT 59.172 36.000 14.67 0.00 46.53 3.41
4400 5044 7.170320 GTCGAGCTCCATAATTCCGTATTTTAA 59.830 37.037 8.47 0.00 0.00 1.52
4403 5047 4.989168 GTCGAGCTCCATAATTCCGTATTT 59.011 41.667 8.47 0.00 0.00 1.40
4423 5067 3.002038 AGTAGTACTTCTGGAGGGTCG 57.998 52.381 0.00 0.00 0.00 4.79
4424 5068 3.876320 CGTAGTAGTACTTCTGGAGGGTC 59.124 52.174 8.40 0.00 0.00 4.46
4425 5069 3.883669 CGTAGTAGTACTTCTGGAGGGT 58.116 50.000 8.40 0.00 0.00 4.34
4433 5077 3.277715 ACAGAGGGCGTAGTAGTACTTC 58.722 50.000 8.40 2.20 0.00 3.01
4436 5080 1.946081 GGACAGAGGGCGTAGTAGTAC 59.054 57.143 0.00 0.00 0.00 2.73
4437 5081 1.133976 GGGACAGAGGGCGTAGTAGTA 60.134 57.143 0.00 0.00 0.00 1.82
4438 5082 0.395448 GGGACAGAGGGCGTAGTAGT 60.395 60.000 0.00 0.00 0.00 2.73
4439 5083 0.395311 TGGGACAGAGGGCGTAGTAG 60.395 60.000 0.00 0.00 0.00 2.57
4440 5084 0.040058 TTGGGACAGAGGGCGTAGTA 59.960 55.000 0.00 0.00 42.39 1.82
4441 5085 1.229082 TTGGGACAGAGGGCGTAGT 60.229 57.895 0.00 0.00 42.39 2.73
4443 5087 0.543410 TTCTTGGGACAGAGGGCGTA 60.543 55.000 0.00 0.00 42.39 4.42
4445 5089 1.078848 CTTCTTGGGACAGAGGGCG 60.079 63.158 0.00 0.00 42.39 6.13
4446 5090 1.377856 GCTTCTTGGGACAGAGGGC 60.378 63.158 0.00 0.00 42.39 5.19
4447 5091 0.695347 AAGCTTCTTGGGACAGAGGG 59.305 55.000 0.00 0.00 42.39 4.30
4448 5092 1.072965 ACAAGCTTCTTGGGACAGAGG 59.927 52.381 10.80 0.00 42.39 3.69
4449 5093 2.038295 AGACAAGCTTCTTGGGACAGAG 59.962 50.000 10.80 0.00 42.39 3.35
4451 5095 2.557920 AGACAAGCTTCTTGGGACAG 57.442 50.000 10.80 0.00 42.39 3.51
4452 5096 3.646162 TCTAAGACAAGCTTCTTGGGACA 59.354 43.478 10.37 0.00 36.48 4.02
4455 5099 7.772757 AGATAAATCTAAGACAAGCTTCTTGGG 59.227 37.037 10.37 4.42 36.48 4.12
4462 5106 8.637986 CCTGTCTAGATAAATCTAAGACAAGCT 58.362 37.037 20.41 0.00 41.41 3.74
4463 5107 7.870445 CCCTGTCTAGATAAATCTAAGACAAGC 59.130 40.741 20.41 0.00 41.41 4.01
4465 5109 9.137459 CTCCCTGTCTAGATAAATCTAAGACAA 57.863 37.037 20.41 12.46 41.41 3.18
4466 5110 7.726291 CCTCCCTGTCTAGATAAATCTAAGACA 59.274 40.741 19.64 19.64 40.71 3.41
4469 5113 9.589461 TTACCTCCCTGTCTAGATAAATCTAAG 57.411 37.037 0.00 0.00 38.80 2.18
4472 5116 9.536510 GTATTACCTCCCTGTCTAGATAAATCT 57.463 37.037 0.00 0.00 40.86 2.40
4474 5118 7.949006 ACGTATTACCTCCCTGTCTAGATAAAT 59.051 37.037 0.00 0.00 0.00 1.40
4475 5119 7.230108 CACGTATTACCTCCCTGTCTAGATAAA 59.770 40.741 0.00 0.00 0.00 1.40
4476 5120 6.713903 CACGTATTACCTCCCTGTCTAGATAA 59.286 42.308 0.00 0.00 0.00 1.75
4477 5121 6.043590 TCACGTATTACCTCCCTGTCTAGATA 59.956 42.308 0.00 0.00 0.00 1.98
4478 5122 5.071370 CACGTATTACCTCCCTGTCTAGAT 58.929 45.833 0.00 0.00 0.00 1.98
4479 5123 4.164796 TCACGTATTACCTCCCTGTCTAGA 59.835 45.833 0.00 0.00 0.00 2.43
4481 5125 4.508551 TCACGTATTACCTCCCTGTCTA 57.491 45.455 0.00 0.00 0.00 2.59
4482 5126 3.377253 TCACGTATTACCTCCCTGTCT 57.623 47.619 0.00 0.00 0.00 3.41
4483 5127 4.460948 TTTCACGTATTACCTCCCTGTC 57.539 45.455 0.00 0.00 0.00 3.51
4484 5128 5.431179 AATTTCACGTATTACCTCCCTGT 57.569 39.130 0.00 0.00 0.00 4.00
4486 5130 7.798071 TCAATAATTTCACGTATTACCTCCCT 58.202 34.615 0.00 0.00 0.00 4.20
4488 5132 9.878599 CATTCAATAATTTCACGTATTACCTCC 57.121 33.333 0.00 0.00 0.00 4.30
4527 5393 6.189133 TGTAAAAGTTACCCCTTGTGAACTT 58.811 36.000 0.00 0.00 42.45 2.66
4596 5462 7.813852 ATCTGTTCTACAGTTATTGTCGTTC 57.186 36.000 6.71 0.00 46.03 3.95
4622 5488 7.113965 GTGATGCAACACTTGTCTAAATTTGAG 59.886 37.037 18.91 0.00 37.73 3.02
4670 5536 2.821688 GCTGCATGCTCGCTCTTCC 61.822 63.158 20.33 0.00 38.95 3.46
4672 5538 1.030488 ATTGCTGCATGCTCGCTCTT 61.030 50.000 25.34 12.54 43.37 2.85
4674 5540 0.235144 CTATTGCTGCATGCTCGCTC 59.765 55.000 25.34 10.03 43.37 5.03
4675 5541 0.463295 ACTATTGCTGCATGCTCGCT 60.463 50.000 25.34 13.83 43.37 4.93
4676 5542 0.041488 GACTATTGCTGCATGCTCGC 60.041 55.000 20.33 20.59 43.37 5.03
4677 5543 0.585357 GGACTATTGCTGCATGCTCG 59.415 55.000 20.33 11.11 43.37 5.03
4678 5544 1.671979 TGGACTATTGCTGCATGCTC 58.328 50.000 20.33 11.24 43.37 4.26
4692 5560 2.604686 TCTCTGCCGCCTTGGACT 60.605 61.111 0.00 0.00 42.00 3.85
4719 5637 1.072806 AGTGCCTCAATCTCACTTGCA 59.927 47.619 0.00 0.00 37.78 4.08
4720 5638 1.467734 CAGTGCCTCAATCTCACTTGC 59.532 52.381 0.00 0.00 38.85 4.01
4721 5639 1.467734 GCAGTGCCTCAATCTCACTTG 59.532 52.381 2.85 0.00 38.85 3.16
4722 5640 1.072806 TGCAGTGCCTCAATCTCACTT 59.927 47.619 13.72 0.00 38.85 3.16
4723 5641 0.689055 TGCAGTGCCTCAATCTCACT 59.311 50.000 13.72 0.00 41.29 3.41
4724 5642 0.801251 GTGCAGTGCCTCAATCTCAC 59.199 55.000 13.72 0.00 0.00 3.51
4725 5643 0.689055 AGTGCAGTGCCTCAATCTCA 59.311 50.000 13.72 0.00 0.00 3.27
4726 5644 1.367659 GAGTGCAGTGCCTCAATCTC 58.632 55.000 21.64 12.49 0.00 2.75
4727 5645 0.035630 GGAGTGCAGTGCCTCAATCT 60.036 55.000 25.36 11.07 31.05 2.40
4728 5646 0.321919 TGGAGTGCAGTGCCTCAATC 60.322 55.000 25.36 12.60 31.05 2.67
4729 5647 0.607489 GTGGAGTGCAGTGCCTCAAT 60.607 55.000 25.36 4.98 31.05 2.57
4730 5648 1.227943 GTGGAGTGCAGTGCCTCAA 60.228 57.895 25.36 17.08 31.05 3.02
4731 5649 1.699054 AAGTGGAGTGCAGTGCCTCA 61.699 55.000 25.36 12.28 31.05 3.86
4732 5650 1.072159 AAGTGGAGTGCAGTGCCTC 59.928 57.895 19.56 19.56 0.00 4.70
4733 5651 1.228063 CAAGTGGAGTGCAGTGCCT 60.228 57.895 13.72 9.31 0.00 4.75
4734 5652 1.227943 TCAAGTGGAGTGCAGTGCC 60.228 57.895 13.72 6.81 0.00 5.01
4735 5653 0.815213 TGTCAAGTGGAGTGCAGTGC 60.815 55.000 8.58 8.58 0.00 4.40
4736 5654 1.224075 CTGTCAAGTGGAGTGCAGTG 58.776 55.000 0.00 0.00 0.00 3.66
4737 5655 0.107456 CCTGTCAAGTGGAGTGCAGT 59.893 55.000 0.00 0.00 0.00 4.40
4738 5656 1.233285 GCCTGTCAAGTGGAGTGCAG 61.233 60.000 0.00 0.00 0.00 4.41
4739 5657 1.227943 GCCTGTCAAGTGGAGTGCA 60.228 57.895 0.00 0.00 0.00 4.57
4740 5658 1.227943 TGCCTGTCAAGTGGAGTGC 60.228 57.895 0.00 0.00 0.00 4.40
4741 5659 1.233285 GCTGCCTGTCAAGTGGAGTG 61.233 60.000 0.00 0.00 0.00 3.51
4742 5660 1.072159 GCTGCCTGTCAAGTGGAGT 59.928 57.895 0.00 0.00 0.00 3.85
4743 5661 0.954449 CTGCTGCCTGTCAAGTGGAG 60.954 60.000 0.00 0.00 0.00 3.86
4744 5662 1.071987 CTGCTGCCTGTCAAGTGGA 59.928 57.895 0.00 0.00 0.00 4.02
4745 5663 1.970114 CCTGCTGCCTGTCAAGTGG 60.970 63.158 0.00 0.00 0.00 4.00
4746 5664 1.228063 ACCTGCTGCCTGTCAAGTG 60.228 57.895 0.00 0.00 0.00 3.16
4747 5665 1.228063 CACCTGCTGCCTGTCAAGT 60.228 57.895 0.00 0.00 0.00 3.16
4748 5666 0.535780 TTCACCTGCTGCCTGTCAAG 60.536 55.000 0.00 0.00 0.00 3.02
4749 5667 0.535780 CTTCACCTGCTGCCTGTCAA 60.536 55.000 0.00 0.00 0.00 3.18
4750 5668 1.071987 CTTCACCTGCTGCCTGTCA 59.928 57.895 0.00 0.00 0.00 3.58
4751 5669 1.673665 CCTTCACCTGCTGCCTGTC 60.674 63.158 0.00 0.00 0.00 3.51
4752 5670 2.433446 CCTTCACCTGCTGCCTGT 59.567 61.111 0.00 0.00 0.00 4.00
4753 5671 3.060615 GCCTTCACCTGCTGCCTG 61.061 66.667 0.00 0.00 0.00 4.85
4754 5672 4.711949 CGCCTTCACCTGCTGCCT 62.712 66.667 0.00 0.00 0.00 4.75
4755 5673 4.704833 TCGCCTTCACCTGCTGCC 62.705 66.667 0.00 0.00 0.00 4.85
4756 5674 3.123620 CTCGCCTTCACCTGCTGC 61.124 66.667 0.00 0.00 0.00 5.25
4757 5675 2.435586 CCTCGCCTTCACCTGCTG 60.436 66.667 0.00 0.00 0.00 4.41
4758 5676 2.925170 ACCTCGCCTTCACCTGCT 60.925 61.111 0.00 0.00 0.00 4.24
4759 5677 2.435059 GACCTCGCCTTCACCTGC 60.435 66.667 0.00 0.00 0.00 4.85
4760 5678 1.374758 GTGACCTCGCCTTCACCTG 60.375 63.158 0.00 0.00 36.85 4.00
4761 5679 1.534235 AGTGACCTCGCCTTCACCT 60.534 57.895 6.52 0.00 42.73 4.00
4762 5680 1.374758 CAGTGACCTCGCCTTCACC 60.375 63.158 6.52 0.00 42.73 4.02
4763 5681 1.374758 CCAGTGACCTCGCCTTCAC 60.375 63.158 0.00 2.84 42.17 3.18
4764 5682 1.533033 TCCAGTGACCTCGCCTTCA 60.533 57.895 0.00 0.00 0.00 3.02
4765 5683 1.216710 CTCCAGTGACCTCGCCTTC 59.783 63.158 0.00 0.00 0.00 3.46
4766 5684 2.286523 CCTCCAGTGACCTCGCCTT 61.287 63.158 0.00 0.00 0.00 4.35
4767 5685 2.681778 CCTCCAGTGACCTCGCCT 60.682 66.667 0.00 0.00 0.00 5.52
4768 5686 3.775654 CCCTCCAGTGACCTCGCC 61.776 72.222 0.00 0.00 0.00 5.54
4900 5818 2.177016 AGGTAAAGTTTTCCCCAGTGCT 59.823 45.455 7.59 0.00 0.00 4.40
4954 5874 2.558795 AGTCTGAAGAAGTTGCTAGCGA 59.441 45.455 10.77 5.12 0.00 4.93
4981 5901 7.750229 ATACACTTGCTTTGAAGATGAGAAA 57.250 32.000 0.00 0.00 0.00 2.52
4997 5917 8.352752 TGAGCGAATAGTTGAATATACACTTG 57.647 34.615 0.00 0.00 0.00 3.16
4998 5918 8.198109 ACTGAGCGAATAGTTGAATATACACTT 58.802 33.333 0.00 0.00 0.00 3.16
5038 5958 4.884164 GTCTTGGATGAAGGTAATTGGAGG 59.116 45.833 0.00 0.00 31.85 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.