Multiple sequence alignment - TraesCS3D01G307600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G307600 chr3D 100.000 6791 0 0 1 6791 421321067 421314277 0.000000e+00 12541
1 TraesCS3D01G307600 chr3D 87.694 837 84 6 5856 6682 421291954 421291127 0.000000e+00 957
2 TraesCS3D01G307600 chr3D 89.125 377 35 5 13 385 553333878 553334252 1.330000e-126 464
3 TraesCS3D01G307600 chr3D 88.542 384 40 3 7 386 581096020 581095637 4.800000e-126 462
4 TraesCS3D01G307600 chr3D 81.703 317 47 9 6148 6462 421704614 421704307 3.140000e-63 254
5 TraesCS3D01G307600 chr3D 80.126 317 48 11 6148 6462 422023175 422022872 8.860000e-54 222
6 TraesCS3D01G307600 chr3A 94.125 6281 227 46 534 6775 529771494 529777671 0.000000e+00 9424
7 TraesCS3D01G307600 chr3A 87.292 842 88 10 5853 6684 529842642 529843474 0.000000e+00 944
8 TraesCS3D01G307600 chr3B 94.235 5291 182 45 569 5789 548051334 548046097 0.000000e+00 7967
9 TraesCS3D01G307600 chr3B 94.319 1021 38 6 5784 6791 548045930 548044917 0.000000e+00 1546
10 TraesCS3D01G307600 chr3B 86.754 838 91 6 5856 6682 548040165 548039337 0.000000e+00 915
11 TraesCS3D01G307600 chr3B 88.718 390 39 3 1 385 21162643 21162254 7.970000e-129 472
12 TraesCS3D01G307600 chr3B 80.442 317 51 8 6148 6462 549427794 549427487 1.470000e-56 231
13 TraesCS3D01G307600 chr5B 87.234 423 42 10 1 416 568186002 568185585 7.970000e-129 472
14 TraesCS3D01G307600 chr5B 87.437 398 44 3 1 392 311547638 311547241 2.890000e-123 453
15 TraesCS3D01G307600 chr1D 88.462 390 40 2 1 386 254638037 254638425 3.710000e-127 466
16 TraesCS3D01G307600 chr1D 88.773 383 39 2 7 385 446756378 446755996 3.710000e-127 466
17 TraesCS3D01G307600 chr7B 88.235 391 40 4 1 385 31556053 31555663 4.800000e-126 462
18 TraesCS3D01G307600 chr2A 87.786 393 42 5 5 392 726299708 726299317 8.030000e-124 455
19 TraesCS3D01G307600 chr2A 81.731 312 51 6 6138 6447 15815214 15815521 8.740000e-64 255


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G307600 chr3D 421314277 421321067 6790 True 12541.0 12541 100.000 1 6791 1 chr3D.!!$R2 6790
1 TraesCS3D01G307600 chr3D 421291127 421291954 827 True 957.0 957 87.694 5856 6682 1 chr3D.!!$R1 826
2 TraesCS3D01G307600 chr3A 529771494 529777671 6177 False 9424.0 9424 94.125 534 6775 1 chr3A.!!$F1 6241
3 TraesCS3D01G307600 chr3A 529842642 529843474 832 False 944.0 944 87.292 5853 6684 1 chr3A.!!$F2 831
4 TraesCS3D01G307600 chr3B 548044917 548051334 6417 True 4756.5 7967 94.277 569 6791 2 chr3B.!!$R4 6222
5 TraesCS3D01G307600 chr3B 548039337 548040165 828 True 915.0 915 86.754 5856 6682 1 chr3B.!!$R2 826

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 0.034574 TTAGCATTGTCGGTGGGCAT 60.035 50.000 0.00 0.00 0.00 4.40 F
225 226 0.036294 AAGGTTTGCCTAGCTCCGAC 60.036 55.000 0.00 0.00 46.33 4.79 F
269 270 0.039074 CGTCTTCGGCTCACTTCAGT 60.039 55.000 0.00 0.00 0.00 3.41 F
273 274 0.106708 TTCGGCTCACTTCAGTGCTT 59.893 50.000 1.74 0.00 45.25 3.91 F
1877 1966 0.108329 ACGCCAAGTACAAGGATCCG 60.108 55.000 5.98 0.00 0.00 4.18 F
2128 2223 0.455410 TGCAGGTTGACAGCACAAAC 59.545 50.000 0.00 0.00 37.69 2.93 F
3236 3333 3.386078 TCTGCCTAGATGGACATTCTGTC 59.614 47.826 0.00 0.00 46.23 3.51 F
3791 3889 0.610174 TTACTCTGTGCAGGCTGGAG 59.390 55.000 17.64 15.78 0.00 3.86 F
4720 4828 1.275291 ACATTACAGCTGGTACGTGCT 59.725 47.619 19.93 5.55 41.01 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1088 1138 0.108585 CGAATGGGGGTGTATCTGGG 59.891 60.000 0.00 0.00 0.00 4.45 R
1090 1140 0.180171 TGCGAATGGGGGTGTATCTG 59.820 55.000 0.00 0.00 0.00 2.90 R
1091 1141 0.469917 CTGCGAATGGGGGTGTATCT 59.530 55.000 0.00 0.00 0.00 1.98 R
2104 2193 0.740149 TGCTGTCAACCTGCAAACAG 59.260 50.000 7.92 7.92 43.98 3.16 R
3583 3681 1.198713 AGCCAGTGACTAGGTCATGG 58.801 55.000 16.90 16.90 44.63 3.66 R
3687 3785 1.399440 CCTGCAATCAGTCACCATTCG 59.601 52.381 0.00 0.00 38.66 3.34 R
4656 4764 1.135960 TTGACCATCCACCACACTGA 58.864 50.000 0.00 0.00 0.00 3.41 R
5250 5358 0.882042 GCACATCAGCGATACCCTGG 60.882 60.000 0.00 0.00 0.00 4.45 R
6539 6845 0.110010 GCGACAAAGAAAGGCTCTGC 60.110 55.000 0.00 0.00 33.37 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.967734 CGTTTAGCATTGTCGGTGG 57.032 52.632 0.00 0.00 0.00 4.61
19 20 0.446222 CGTTTAGCATTGTCGGTGGG 59.554 55.000 0.00 0.00 0.00 4.61
20 21 0.170339 GTTTAGCATTGTCGGTGGGC 59.830 55.000 0.00 0.00 0.00 5.36
21 22 0.250945 TTTAGCATTGTCGGTGGGCA 60.251 50.000 0.00 0.00 0.00 5.36
22 23 0.034574 TTAGCATTGTCGGTGGGCAT 60.035 50.000 0.00 0.00 0.00 4.40
23 24 0.747644 TAGCATTGTCGGTGGGCATG 60.748 55.000 0.00 0.00 0.00 4.06
24 25 2.342650 GCATTGTCGGTGGGCATGT 61.343 57.895 0.00 0.00 0.00 3.21
25 26 1.507630 CATTGTCGGTGGGCATGTG 59.492 57.895 0.00 0.00 0.00 3.21
26 27 1.678635 ATTGTCGGTGGGCATGTGG 60.679 57.895 0.00 0.00 0.00 4.17
27 28 2.135903 ATTGTCGGTGGGCATGTGGA 62.136 55.000 0.00 0.00 0.00 4.02
28 29 2.436646 GTCGGTGGGCATGTGGAG 60.437 66.667 0.00 0.00 0.00 3.86
29 30 3.716195 TCGGTGGGCATGTGGAGG 61.716 66.667 0.00 0.00 0.00 4.30
30 31 4.033776 CGGTGGGCATGTGGAGGT 62.034 66.667 0.00 0.00 0.00 3.85
31 32 2.361610 GGTGGGCATGTGGAGGTG 60.362 66.667 0.00 0.00 0.00 4.00
32 33 2.436109 GTGGGCATGTGGAGGTGT 59.564 61.111 0.00 0.00 0.00 4.16
33 34 1.973281 GTGGGCATGTGGAGGTGTG 60.973 63.158 0.00 0.00 0.00 3.82
34 35 2.436109 GGGCATGTGGAGGTGTGT 59.564 61.111 0.00 0.00 0.00 3.72
35 36 1.675641 GGGCATGTGGAGGTGTGTC 60.676 63.158 0.00 0.00 0.00 3.67
36 37 1.376466 GGCATGTGGAGGTGTGTCT 59.624 57.895 0.00 0.00 0.00 3.41
37 38 0.674895 GGCATGTGGAGGTGTGTCTC 60.675 60.000 0.00 0.00 0.00 3.36
42 43 3.311110 GGAGGTGTGTCTCCGGCA 61.311 66.667 0.00 0.00 43.19 5.69
43 44 2.660064 GGAGGTGTGTCTCCGGCAT 61.660 63.158 0.00 0.00 43.19 4.40
44 45 1.327690 GGAGGTGTGTCTCCGGCATA 61.328 60.000 0.00 0.00 43.19 3.14
45 46 0.753262 GAGGTGTGTCTCCGGCATAT 59.247 55.000 0.00 0.00 0.00 1.78
46 47 1.139058 GAGGTGTGTCTCCGGCATATT 59.861 52.381 0.00 0.00 0.00 1.28
47 48 1.559682 AGGTGTGTCTCCGGCATATTT 59.440 47.619 0.00 0.00 0.00 1.40
48 49 1.670811 GGTGTGTCTCCGGCATATTTG 59.329 52.381 0.00 0.00 0.00 2.32
49 50 2.356135 GTGTGTCTCCGGCATATTTGT 58.644 47.619 0.00 0.00 0.00 2.83
50 51 2.351726 GTGTGTCTCCGGCATATTTGTC 59.648 50.000 0.00 0.00 0.00 3.18
51 52 2.236146 TGTGTCTCCGGCATATTTGTCT 59.764 45.455 0.00 0.00 0.00 3.41
52 53 3.270877 GTGTCTCCGGCATATTTGTCTT 58.729 45.455 0.00 0.00 0.00 3.01
53 54 3.689649 GTGTCTCCGGCATATTTGTCTTT 59.310 43.478 0.00 0.00 0.00 2.52
54 55 3.689161 TGTCTCCGGCATATTTGTCTTTG 59.311 43.478 0.00 0.00 0.00 2.77
55 56 3.065371 GTCTCCGGCATATTTGTCTTTGG 59.935 47.826 0.00 0.00 0.00 3.28
56 57 3.016736 CTCCGGCATATTTGTCTTTGGT 58.983 45.455 0.00 0.00 0.00 3.67
57 58 2.752354 TCCGGCATATTTGTCTTTGGTG 59.248 45.455 0.00 0.00 0.00 4.17
58 59 2.752354 CCGGCATATTTGTCTTTGGTGA 59.248 45.455 0.00 0.00 0.00 4.02
59 60 3.192422 CCGGCATATTTGTCTTTGGTGAA 59.808 43.478 0.00 0.00 0.00 3.18
60 61 4.142182 CCGGCATATTTGTCTTTGGTGAAT 60.142 41.667 0.00 0.00 0.00 2.57
61 62 5.410067 CGGCATATTTGTCTTTGGTGAATT 58.590 37.500 0.00 0.00 0.00 2.17
62 63 5.868801 CGGCATATTTGTCTTTGGTGAATTT 59.131 36.000 0.00 0.00 0.00 1.82
63 64 6.183360 CGGCATATTTGTCTTTGGTGAATTTG 60.183 38.462 0.00 0.00 0.00 2.32
64 65 6.402442 GGCATATTTGTCTTTGGTGAATTTGC 60.402 38.462 0.00 0.00 35.41 3.68
65 66 6.369615 GCATATTTGTCTTTGGTGAATTTGCT 59.630 34.615 0.00 0.00 34.24 3.91
66 67 7.412237 GCATATTTGTCTTTGGTGAATTTGCTC 60.412 37.037 0.00 0.00 34.24 4.26
67 68 3.624326 TGTCTTTGGTGAATTTGCTCG 57.376 42.857 0.00 0.00 0.00 5.03
68 69 2.293122 TGTCTTTGGTGAATTTGCTCGG 59.707 45.455 0.00 0.00 0.00 4.63
69 70 2.552315 GTCTTTGGTGAATTTGCTCGGA 59.448 45.455 0.00 0.00 0.00 4.55
70 71 3.191371 GTCTTTGGTGAATTTGCTCGGAT 59.809 43.478 0.00 0.00 0.00 4.18
71 72 3.440173 TCTTTGGTGAATTTGCTCGGATC 59.560 43.478 0.00 0.00 0.00 3.36
72 73 2.787473 TGGTGAATTTGCTCGGATCT 57.213 45.000 0.00 0.00 0.00 2.75
73 74 3.904800 TGGTGAATTTGCTCGGATCTA 57.095 42.857 0.00 0.00 0.00 1.98
74 75 4.422073 TGGTGAATTTGCTCGGATCTAT 57.578 40.909 0.00 0.00 0.00 1.98
75 76 4.780815 TGGTGAATTTGCTCGGATCTATT 58.219 39.130 0.00 0.00 0.00 1.73
76 77 4.816385 TGGTGAATTTGCTCGGATCTATTC 59.184 41.667 0.00 0.00 0.00 1.75
77 78 4.816385 GGTGAATTTGCTCGGATCTATTCA 59.184 41.667 0.00 0.00 31.63 2.57
78 79 5.471456 GGTGAATTTGCTCGGATCTATTCAT 59.529 40.000 10.70 0.00 35.31 2.57
79 80 6.348050 GGTGAATTTGCTCGGATCTATTCATC 60.348 42.308 10.70 8.10 35.31 2.92
80 81 5.406477 TGAATTTGCTCGGATCTATTCATCG 59.594 40.000 0.00 0.00 29.76 3.84
81 82 4.322080 TTTGCTCGGATCTATTCATCGT 57.678 40.909 0.00 0.00 0.00 3.73
82 83 4.322080 TTGCTCGGATCTATTCATCGTT 57.678 40.909 0.00 0.00 0.00 3.85
83 84 4.322080 TGCTCGGATCTATTCATCGTTT 57.678 40.909 0.00 0.00 0.00 3.60
84 85 5.447624 TGCTCGGATCTATTCATCGTTTA 57.552 39.130 0.00 0.00 0.00 2.01
85 86 6.025749 TGCTCGGATCTATTCATCGTTTAT 57.974 37.500 0.00 0.00 0.00 1.40
86 87 5.863935 TGCTCGGATCTATTCATCGTTTATG 59.136 40.000 0.00 0.00 36.88 1.90
87 88 5.864474 GCTCGGATCTATTCATCGTTTATGT 59.136 40.000 0.00 0.00 36.89 2.29
88 89 6.366332 GCTCGGATCTATTCATCGTTTATGTT 59.634 38.462 0.00 0.00 36.89 2.71
89 90 7.410942 GCTCGGATCTATTCATCGTTTATGTTC 60.411 40.741 0.00 0.00 36.89 3.18
90 91 7.658261 TCGGATCTATTCATCGTTTATGTTCT 58.342 34.615 0.00 0.00 36.89 3.01
91 92 8.141909 TCGGATCTATTCATCGTTTATGTTCTT 58.858 33.333 0.00 0.00 36.89 2.52
92 93 8.217115 CGGATCTATTCATCGTTTATGTTCTTG 58.783 37.037 0.00 0.00 36.89 3.02
93 94 9.046296 GGATCTATTCATCGTTTATGTTCTTGT 57.954 33.333 0.00 0.00 36.89 3.16
94 95 9.855361 GATCTATTCATCGTTTATGTTCTTGTG 57.145 33.333 0.00 0.00 36.89 3.33
95 96 8.771920 TCTATTCATCGTTTATGTTCTTGTGT 57.228 30.769 0.00 0.00 36.89 3.72
96 97 8.869897 TCTATTCATCGTTTATGTTCTTGTGTC 58.130 33.333 0.00 0.00 36.89 3.67
97 98 7.672983 ATTCATCGTTTATGTTCTTGTGTCT 57.327 32.000 0.00 0.00 36.89 3.41
98 99 7.490962 TTCATCGTTTATGTTCTTGTGTCTT 57.509 32.000 0.00 0.00 36.89 3.01
99 100 7.117241 TCATCGTTTATGTTCTTGTGTCTTC 57.883 36.000 0.00 0.00 36.89 2.87
100 101 6.704050 TCATCGTTTATGTTCTTGTGTCTTCA 59.296 34.615 0.00 0.00 36.89 3.02
101 102 6.525121 TCGTTTATGTTCTTGTGTCTTCAG 57.475 37.500 0.00 0.00 0.00 3.02
102 103 5.465390 TCGTTTATGTTCTTGTGTCTTCAGG 59.535 40.000 0.00 0.00 0.00 3.86
103 104 5.236478 CGTTTATGTTCTTGTGTCTTCAGGT 59.764 40.000 0.00 0.00 0.00 4.00
104 105 6.238374 CGTTTATGTTCTTGTGTCTTCAGGTT 60.238 38.462 0.00 0.00 0.00 3.50
105 106 6.618287 TTATGTTCTTGTGTCTTCAGGTTG 57.382 37.500 0.00 0.00 0.00 3.77
106 107 3.278574 TGTTCTTGTGTCTTCAGGTTGG 58.721 45.455 0.00 0.00 0.00 3.77
107 108 3.054728 TGTTCTTGTGTCTTCAGGTTGGA 60.055 43.478 0.00 0.00 0.00 3.53
108 109 4.137543 GTTCTTGTGTCTTCAGGTTGGAT 58.862 43.478 0.00 0.00 0.00 3.41
109 110 4.008074 TCTTGTGTCTTCAGGTTGGATC 57.992 45.455 0.00 0.00 0.00 3.36
110 111 2.859165 TGTGTCTTCAGGTTGGATCC 57.141 50.000 4.20 4.20 0.00 3.36
111 112 2.338809 TGTGTCTTCAGGTTGGATCCT 58.661 47.619 14.23 0.00 38.51 3.24
112 113 2.711009 TGTGTCTTCAGGTTGGATCCTT 59.289 45.455 14.23 0.00 35.37 3.36
113 114 3.244561 TGTGTCTTCAGGTTGGATCCTTC 60.245 47.826 14.23 5.77 35.37 3.46
114 115 3.008485 GTGTCTTCAGGTTGGATCCTTCT 59.992 47.826 14.23 4.81 35.37 2.85
115 116 3.008375 TGTCTTCAGGTTGGATCCTTCTG 59.992 47.826 14.23 16.37 35.37 3.02
116 117 2.026822 TCTTCAGGTTGGATCCTTCTGC 60.027 50.000 14.23 0.00 35.37 4.26
117 118 1.661463 TCAGGTTGGATCCTTCTGCT 58.339 50.000 14.23 0.00 35.37 4.24
118 119 1.988107 TCAGGTTGGATCCTTCTGCTT 59.012 47.619 14.23 0.00 35.37 3.91
119 120 2.376518 TCAGGTTGGATCCTTCTGCTTT 59.623 45.455 14.23 0.00 35.37 3.51
120 121 3.587061 TCAGGTTGGATCCTTCTGCTTTA 59.413 43.478 14.23 0.00 35.37 1.85
121 122 3.691609 CAGGTTGGATCCTTCTGCTTTAC 59.308 47.826 14.23 0.00 35.37 2.01
122 123 3.330701 AGGTTGGATCCTTCTGCTTTACA 59.669 43.478 14.23 0.00 33.52 2.41
123 124 3.440522 GGTTGGATCCTTCTGCTTTACAC 59.559 47.826 14.23 0.00 0.00 2.90
124 125 4.327680 GTTGGATCCTTCTGCTTTACACT 58.672 43.478 14.23 0.00 0.00 3.55
125 126 4.207891 TGGATCCTTCTGCTTTACACTC 57.792 45.455 14.23 0.00 0.00 3.51
126 127 3.840666 TGGATCCTTCTGCTTTACACTCT 59.159 43.478 14.23 0.00 0.00 3.24
127 128 4.287067 TGGATCCTTCTGCTTTACACTCTT 59.713 41.667 14.23 0.00 0.00 2.85
128 129 4.873259 GGATCCTTCTGCTTTACACTCTTC 59.127 45.833 3.84 0.00 0.00 2.87
129 130 4.955811 TCCTTCTGCTTTACACTCTTCA 57.044 40.909 0.00 0.00 0.00 3.02
130 131 5.489792 TCCTTCTGCTTTACACTCTTCAT 57.510 39.130 0.00 0.00 0.00 2.57
131 132 5.869579 TCCTTCTGCTTTACACTCTTCATT 58.130 37.500 0.00 0.00 0.00 2.57
132 133 5.702670 TCCTTCTGCTTTACACTCTTCATTG 59.297 40.000 0.00 0.00 0.00 2.82
133 134 5.106396 CCTTCTGCTTTACACTCTTCATTGG 60.106 44.000 0.00 0.00 0.00 3.16
134 135 3.753272 TCTGCTTTACACTCTTCATTGGC 59.247 43.478 0.00 0.00 0.00 4.52
135 136 2.483877 TGCTTTACACTCTTCATTGGCG 59.516 45.455 0.00 0.00 0.00 5.69
136 137 2.159517 GCTTTACACTCTTCATTGGCGG 60.160 50.000 0.00 0.00 0.00 6.13
137 138 1.448985 TTACACTCTTCATTGGCGGC 58.551 50.000 0.00 0.00 0.00 6.53
138 139 0.739462 TACACTCTTCATTGGCGGCG 60.739 55.000 0.51 0.51 0.00 6.46
139 140 2.034879 CACTCTTCATTGGCGGCGT 61.035 57.895 9.37 0.00 0.00 5.68
140 141 1.302511 ACTCTTCATTGGCGGCGTT 60.303 52.632 9.37 0.00 0.00 4.84
141 142 0.889186 ACTCTTCATTGGCGGCGTTT 60.889 50.000 9.37 0.00 0.00 3.60
142 143 0.454957 CTCTTCATTGGCGGCGTTTG 60.455 55.000 9.37 1.60 0.00 2.93
143 144 2.049618 TTCATTGGCGGCGTTTGC 60.050 55.556 9.37 0.00 41.71 3.68
144 145 2.476534 CTTCATTGGCGGCGTTTGCT 62.477 55.000 9.37 0.00 42.25 3.91
151 152 2.252260 CGGCGTTTGCTGTTCTGG 59.748 61.111 0.00 0.00 42.79 3.86
152 153 2.542907 CGGCGTTTGCTGTTCTGGT 61.543 57.895 0.00 0.00 42.79 4.00
153 154 1.008538 GGCGTTTGCTGTTCTGGTG 60.009 57.895 0.00 0.00 42.25 4.17
154 155 1.724582 GGCGTTTGCTGTTCTGGTGT 61.725 55.000 0.00 0.00 42.25 4.16
155 156 0.592247 GCGTTTGCTGTTCTGGTGTG 60.592 55.000 0.00 0.00 38.39 3.82
156 157 0.732571 CGTTTGCTGTTCTGGTGTGT 59.267 50.000 0.00 0.00 0.00 3.72
157 158 1.132262 CGTTTGCTGTTCTGGTGTGTT 59.868 47.619 0.00 0.00 0.00 3.32
158 159 2.529151 GTTTGCTGTTCTGGTGTGTTG 58.471 47.619 0.00 0.00 0.00 3.33
159 160 0.455410 TTGCTGTTCTGGTGTGTTGC 59.545 50.000 0.00 0.00 0.00 4.17
160 161 0.394216 TGCTGTTCTGGTGTGTTGCT 60.394 50.000 0.00 0.00 0.00 3.91
161 162 0.740737 GCTGTTCTGGTGTGTTGCTT 59.259 50.000 0.00 0.00 0.00 3.91
162 163 1.268743 GCTGTTCTGGTGTGTTGCTTC 60.269 52.381 0.00 0.00 0.00 3.86
163 164 2.292267 CTGTTCTGGTGTGTTGCTTCT 58.708 47.619 0.00 0.00 0.00 2.85
164 165 3.466836 CTGTTCTGGTGTGTTGCTTCTA 58.533 45.455 0.00 0.00 0.00 2.10
165 166 4.067896 CTGTTCTGGTGTGTTGCTTCTAT 58.932 43.478 0.00 0.00 0.00 1.98
166 167 3.814842 TGTTCTGGTGTGTTGCTTCTATG 59.185 43.478 0.00 0.00 0.00 2.23
167 168 3.057969 TCTGGTGTGTTGCTTCTATGG 57.942 47.619 0.00 0.00 0.00 2.74
168 169 2.086869 CTGGTGTGTTGCTTCTATGGG 58.913 52.381 0.00 0.00 0.00 4.00
169 170 1.271871 TGGTGTGTTGCTTCTATGGGG 60.272 52.381 0.00 0.00 0.00 4.96
170 171 0.811281 GTGTGTTGCTTCTATGGGGC 59.189 55.000 0.00 0.00 0.00 5.80
171 172 0.698238 TGTGTTGCTTCTATGGGGCT 59.302 50.000 0.00 0.00 0.00 5.19
172 173 1.075374 TGTGTTGCTTCTATGGGGCTT 59.925 47.619 0.00 0.00 0.00 4.35
173 174 2.171003 GTGTTGCTTCTATGGGGCTTT 58.829 47.619 0.00 0.00 0.00 3.51
174 175 3.245087 TGTGTTGCTTCTATGGGGCTTTA 60.245 43.478 0.00 0.00 0.00 1.85
175 176 3.378427 GTGTTGCTTCTATGGGGCTTTAG 59.622 47.826 0.00 0.00 0.00 1.85
176 177 2.348411 TGCTTCTATGGGGCTTTAGC 57.652 50.000 0.00 0.00 41.14 3.09
177 178 1.563879 TGCTTCTATGGGGCTTTAGCA 59.436 47.619 3.88 0.00 44.36 3.49
178 179 1.950216 GCTTCTATGGGGCTTTAGCAC 59.050 52.381 3.88 0.00 45.53 4.40
184 185 3.471399 GGGCTTTAGCACGACGAC 58.529 61.111 0.00 0.00 44.36 4.34
185 186 1.080025 GGGCTTTAGCACGACGACT 60.080 57.895 0.00 0.59 44.36 4.18
186 187 0.669625 GGGCTTTAGCACGACGACTT 60.670 55.000 0.00 0.00 44.36 3.01
187 188 0.714439 GGCTTTAGCACGACGACTTC 59.286 55.000 0.00 0.00 44.36 3.01
188 189 0.714439 GCTTTAGCACGACGACTTCC 59.286 55.000 0.00 0.00 41.59 3.46
189 190 1.347320 CTTTAGCACGACGACTTCCC 58.653 55.000 0.00 0.00 0.00 3.97
190 191 0.387622 TTTAGCACGACGACTTCCCG 60.388 55.000 0.00 0.00 0.00 5.14
191 192 1.236616 TTAGCACGACGACTTCCCGA 61.237 55.000 0.00 0.00 0.00 5.14
192 193 1.915614 TAGCACGACGACTTCCCGAC 61.916 60.000 0.00 0.00 0.00 4.79
193 194 2.952245 CACGACGACTTCCCGACT 59.048 61.111 0.00 0.00 0.00 4.18
194 195 1.442184 CACGACGACTTCCCGACTG 60.442 63.158 0.00 0.00 0.00 3.51
195 196 1.895707 ACGACGACTTCCCGACTGT 60.896 57.895 0.00 0.00 0.00 3.55
196 197 1.154263 CGACGACTTCCCGACTGTC 60.154 63.158 0.00 0.00 0.00 3.51
197 198 1.575576 CGACGACTTCCCGACTGTCT 61.576 60.000 6.21 0.00 0.00 3.41
198 199 1.446907 GACGACTTCCCGACTGTCTA 58.553 55.000 6.21 0.00 0.00 2.59
199 200 1.130186 GACGACTTCCCGACTGTCTAC 59.870 57.143 6.21 0.00 0.00 2.59
200 201 1.271271 ACGACTTCCCGACTGTCTACT 60.271 52.381 6.21 0.00 0.00 2.57
201 202 2.027745 ACGACTTCCCGACTGTCTACTA 60.028 50.000 6.21 0.00 0.00 1.82
202 203 2.351111 CGACTTCCCGACTGTCTACTAC 59.649 54.545 6.21 0.00 0.00 2.73
203 204 3.341823 GACTTCCCGACTGTCTACTACA 58.658 50.000 6.21 0.00 36.42 2.74
204 205 3.755378 GACTTCCCGACTGTCTACTACAA 59.245 47.826 6.21 0.00 37.74 2.41
205 206 4.342359 ACTTCCCGACTGTCTACTACAAT 58.658 43.478 6.21 0.00 37.74 2.71
206 207 5.503927 ACTTCCCGACTGTCTACTACAATA 58.496 41.667 6.21 0.00 37.74 1.90
207 208 5.948162 ACTTCCCGACTGTCTACTACAATAA 59.052 40.000 6.21 0.00 37.74 1.40
208 209 6.095160 ACTTCCCGACTGTCTACTACAATAAG 59.905 42.308 6.21 0.00 37.74 1.73
209 210 4.885907 TCCCGACTGTCTACTACAATAAGG 59.114 45.833 6.21 0.00 37.74 2.69
210 211 4.643784 CCCGACTGTCTACTACAATAAGGT 59.356 45.833 6.21 0.00 37.74 3.50
211 212 5.126707 CCCGACTGTCTACTACAATAAGGTT 59.873 44.000 6.21 0.00 37.74 3.50
212 213 6.350780 CCCGACTGTCTACTACAATAAGGTTT 60.351 42.308 6.21 0.00 37.74 3.27
213 214 6.530534 CCGACTGTCTACTACAATAAGGTTTG 59.469 42.308 6.21 0.00 37.74 2.93
214 215 6.034683 CGACTGTCTACTACAATAAGGTTTGC 59.965 42.308 6.21 0.00 37.74 3.68
215 216 6.171213 ACTGTCTACTACAATAAGGTTTGCC 58.829 40.000 0.00 0.00 37.74 4.52
216 217 6.013639 ACTGTCTACTACAATAAGGTTTGCCT 60.014 38.462 0.00 0.00 42.03 4.75
217 218 7.179694 ACTGTCTACTACAATAAGGTTTGCCTA 59.820 37.037 0.00 0.00 40.31 3.93
218 219 7.553334 TGTCTACTACAATAAGGTTTGCCTAG 58.447 38.462 0.00 0.00 38.70 3.02
219 220 6.479331 GTCTACTACAATAAGGTTTGCCTAGC 59.521 42.308 0.00 0.00 46.33 3.42
220 221 5.437191 ACTACAATAAGGTTTGCCTAGCT 57.563 39.130 0.00 0.00 46.33 3.32
221 222 5.429130 ACTACAATAAGGTTTGCCTAGCTC 58.571 41.667 0.00 0.00 46.33 4.09
222 223 3.621558 ACAATAAGGTTTGCCTAGCTCC 58.378 45.455 0.00 0.00 46.33 4.70
223 224 2.614057 CAATAAGGTTTGCCTAGCTCCG 59.386 50.000 0.00 0.00 46.33 4.63
224 225 1.563924 TAAGGTTTGCCTAGCTCCGA 58.436 50.000 0.00 0.00 46.33 4.55
225 226 0.036294 AAGGTTTGCCTAGCTCCGAC 60.036 55.000 0.00 0.00 46.33 4.79
226 227 1.810030 GGTTTGCCTAGCTCCGACG 60.810 63.158 0.00 0.00 0.00 5.12
227 228 1.214589 GTTTGCCTAGCTCCGACGA 59.785 57.895 0.00 0.00 0.00 4.20
228 229 0.802607 GTTTGCCTAGCTCCGACGAG 60.803 60.000 0.00 0.00 39.33 4.18
229 230 1.945354 TTTGCCTAGCTCCGACGAGG 61.945 60.000 0.00 0.00 42.97 4.63
230 231 3.597728 GCCTAGCTCCGACGAGGG 61.598 72.222 0.00 0.00 41.52 4.30
231 232 2.192443 CCTAGCTCCGACGAGGGA 59.808 66.667 0.00 0.00 41.52 4.20
240 241 3.917760 GACGAGGGAGGGCCGATG 61.918 72.222 0.00 0.00 33.83 3.84
241 242 4.458829 ACGAGGGAGGGCCGATGA 62.459 66.667 0.00 0.00 33.83 2.92
242 243 3.917760 CGAGGGAGGGCCGATGAC 61.918 72.222 0.00 0.00 33.83 3.06
243 244 2.764128 GAGGGAGGGCCGATGACA 60.764 66.667 0.00 0.00 33.83 3.58
244 245 2.765807 AGGGAGGGCCGATGACAG 60.766 66.667 0.00 0.00 33.83 3.51
245 246 4.554036 GGGAGGGCCGATGACAGC 62.554 72.222 0.00 0.00 33.83 4.40
246 247 4.899239 GGAGGGCCGATGACAGCG 62.899 72.222 6.03 6.03 0.00 5.18
255 256 4.742201 ATGACAGCGGCGCGTCTT 62.742 61.111 36.37 31.42 34.86 3.01
265 266 2.430921 CGCGTCTTCGGCTCACTT 60.431 61.111 0.00 0.00 37.56 3.16
266 267 2.437343 CGCGTCTTCGGCTCACTTC 61.437 63.158 0.00 0.00 37.56 3.01
267 268 1.372997 GCGTCTTCGGCTCACTTCA 60.373 57.895 0.00 0.00 37.56 3.02
268 269 1.347817 GCGTCTTCGGCTCACTTCAG 61.348 60.000 0.00 0.00 37.56 3.02
269 270 0.039074 CGTCTTCGGCTCACTTCAGT 60.039 55.000 0.00 0.00 0.00 3.41
270 271 1.423395 GTCTTCGGCTCACTTCAGTG 58.577 55.000 0.02 0.02 46.91 3.66
271 272 0.319900 TCTTCGGCTCACTTCAGTGC 60.320 55.000 1.74 0.00 45.25 4.40
272 273 0.320247 CTTCGGCTCACTTCAGTGCT 60.320 55.000 1.74 0.00 45.25 4.40
273 274 0.106708 TTCGGCTCACTTCAGTGCTT 59.893 50.000 1.74 0.00 45.25 3.91
274 275 0.601046 TCGGCTCACTTCAGTGCTTG 60.601 55.000 1.74 0.00 45.25 4.01
275 276 0.882042 CGGCTCACTTCAGTGCTTGT 60.882 55.000 1.74 0.00 45.25 3.16
276 277 1.605457 CGGCTCACTTCAGTGCTTGTA 60.605 52.381 1.74 0.00 45.25 2.41
277 278 1.801178 GGCTCACTTCAGTGCTTGTAC 59.199 52.381 1.74 0.00 45.25 2.90
278 279 2.548920 GGCTCACTTCAGTGCTTGTACT 60.549 50.000 1.74 0.00 45.25 2.73
279 280 2.734079 GCTCACTTCAGTGCTTGTACTC 59.266 50.000 1.74 0.00 45.25 2.59
280 281 2.983136 CTCACTTCAGTGCTTGTACTCG 59.017 50.000 1.74 0.00 45.25 4.18
281 282 2.361119 TCACTTCAGTGCTTGTACTCGT 59.639 45.455 1.74 0.00 45.25 4.18
282 283 2.726760 CACTTCAGTGCTTGTACTCGTC 59.273 50.000 0.00 0.00 39.39 4.20
283 284 1.979469 CTTCAGTGCTTGTACTCGTCG 59.021 52.381 0.00 0.00 0.00 5.12
284 285 0.386858 TCAGTGCTTGTACTCGTCGC 60.387 55.000 0.00 0.00 0.00 5.19
285 286 0.387367 CAGTGCTTGTACTCGTCGCT 60.387 55.000 0.00 0.00 0.00 4.93
286 287 1.135774 CAGTGCTTGTACTCGTCGCTA 60.136 52.381 0.00 0.00 0.00 4.26
287 288 1.130749 AGTGCTTGTACTCGTCGCTAG 59.869 52.381 0.00 0.00 0.00 3.42
288 289 1.129998 GTGCTTGTACTCGTCGCTAGA 59.870 52.381 0.00 0.00 0.00 2.43
289 290 2.014857 TGCTTGTACTCGTCGCTAGAT 58.985 47.619 0.00 0.00 0.00 1.98
290 291 2.223272 TGCTTGTACTCGTCGCTAGATG 60.223 50.000 0.00 0.00 34.75 2.90
291 292 2.031807 GCTTGTACTCGTCGCTAGATGA 59.968 50.000 0.00 0.00 39.89 2.92
292 293 3.304123 GCTTGTACTCGTCGCTAGATGAT 60.304 47.826 0.00 0.00 41.18 2.45
293 294 4.459606 CTTGTACTCGTCGCTAGATGATC 58.540 47.826 0.00 0.00 41.18 2.92
294 295 3.729966 TGTACTCGTCGCTAGATGATCT 58.270 45.455 0.00 0.00 41.18 2.75
295 296 4.879598 TGTACTCGTCGCTAGATGATCTA 58.120 43.478 1.72 1.72 41.18 1.98
296 297 4.685165 TGTACTCGTCGCTAGATGATCTAC 59.315 45.833 0.00 0.00 41.18 2.59
297 298 2.732500 ACTCGTCGCTAGATGATCTACG 59.267 50.000 8.71 8.71 41.18 3.51
298 299 2.067013 TCGTCGCTAGATGATCTACGG 58.933 52.381 13.56 3.01 37.48 4.02
299 300 2.067013 CGTCGCTAGATGATCTACGGA 58.933 52.381 17.72 8.38 35.43 4.69
300 301 2.673862 CGTCGCTAGATGATCTACGGAT 59.326 50.000 17.72 0.00 35.43 4.18
301 302 3.242155 CGTCGCTAGATGATCTACGGATC 60.242 52.174 17.72 0.00 46.20 3.36
302 303 3.936453 GTCGCTAGATGATCTACGGATCT 59.064 47.826 17.72 0.00 46.18 2.75
303 304 3.935828 TCGCTAGATGATCTACGGATCTG 59.064 47.826 17.72 0.00 46.18 2.90
304 305 3.064682 CGCTAGATGATCTACGGATCTGG 59.935 52.174 6.47 1.93 46.18 3.86
305 306 4.265893 GCTAGATGATCTACGGATCTGGA 58.734 47.826 6.47 0.00 46.18 3.86
306 307 4.887071 GCTAGATGATCTACGGATCTGGAT 59.113 45.833 6.47 0.00 46.18 3.41
307 308 5.221028 GCTAGATGATCTACGGATCTGGATG 60.221 48.000 6.47 0.00 46.18 3.51
308 309 4.671831 AGATGATCTACGGATCTGGATGT 58.328 43.478 6.47 0.00 46.18 3.06
309 310 5.821097 AGATGATCTACGGATCTGGATGTA 58.179 41.667 6.47 0.00 46.18 2.29
310 311 6.249192 AGATGATCTACGGATCTGGATGTAA 58.751 40.000 6.47 0.00 46.18 2.41
311 312 6.894654 AGATGATCTACGGATCTGGATGTAAT 59.105 38.462 6.47 0.00 46.18 1.89
312 313 6.918067 TGATCTACGGATCTGGATGTAATT 57.082 37.500 6.47 0.00 46.18 1.40
313 314 7.303182 TGATCTACGGATCTGGATGTAATTT 57.697 36.000 6.47 0.00 46.18 1.82
314 315 7.735917 TGATCTACGGATCTGGATGTAATTTT 58.264 34.615 6.47 0.00 46.18 1.82
315 316 8.210946 TGATCTACGGATCTGGATGTAATTTTT 58.789 33.333 6.47 0.00 46.18 1.94
316 317 9.706691 GATCTACGGATCTGGATGTAATTTTTA 57.293 33.333 6.47 0.00 43.55 1.52
342 343 8.970691 TTATTTCTAGTGTTCGTTGTACTACC 57.029 34.615 1.76 0.00 0.00 3.18
343 344 6.389830 TTTCTAGTGTTCGTTGTACTACCA 57.610 37.500 1.76 0.00 0.00 3.25
344 345 6.579666 TTCTAGTGTTCGTTGTACTACCAT 57.420 37.500 1.76 0.00 0.00 3.55
345 346 6.579666 TCTAGTGTTCGTTGTACTACCATT 57.420 37.500 1.76 0.00 0.00 3.16
346 347 7.686438 TCTAGTGTTCGTTGTACTACCATTA 57.314 36.000 1.76 0.00 0.00 1.90
347 348 8.284945 TCTAGTGTTCGTTGTACTACCATTAT 57.715 34.615 1.76 0.00 0.00 1.28
348 349 8.742777 TCTAGTGTTCGTTGTACTACCATTATT 58.257 33.333 1.76 0.00 0.00 1.40
349 350 7.591006 AGTGTTCGTTGTACTACCATTATTG 57.409 36.000 1.76 0.00 0.00 1.90
350 351 7.380536 AGTGTTCGTTGTACTACCATTATTGA 58.619 34.615 1.76 0.00 0.00 2.57
351 352 7.874016 AGTGTTCGTTGTACTACCATTATTGAA 59.126 33.333 1.76 0.00 0.00 2.69
352 353 8.166706 GTGTTCGTTGTACTACCATTATTGAAG 58.833 37.037 1.76 0.00 0.00 3.02
353 354 8.089597 TGTTCGTTGTACTACCATTATTGAAGA 58.910 33.333 1.76 0.00 0.00 2.87
354 355 9.095065 GTTCGTTGTACTACCATTATTGAAGAT 57.905 33.333 1.76 0.00 0.00 2.40
355 356 8.642908 TCGTTGTACTACCATTATTGAAGATG 57.357 34.615 1.76 0.00 0.00 2.90
356 357 8.471609 TCGTTGTACTACCATTATTGAAGATGA 58.528 33.333 1.76 0.00 0.00 2.92
357 358 9.093970 CGTTGTACTACCATTATTGAAGATGAA 57.906 33.333 1.76 0.00 0.00 2.57
405 406 8.887036 AAAAAGGAATAACCAAGTGATTTCAC 57.113 30.769 2.41 2.41 43.28 3.18
406 407 7.595819 AAAGGAATAACCAAGTGATTTCACA 57.404 32.000 12.87 0.00 44.40 3.58
407 408 7.595819 AAGGAATAACCAAGTGATTTCACAA 57.404 32.000 12.87 0.00 44.40 3.33
408 409 7.595819 AGGAATAACCAAGTGATTTCACAAA 57.404 32.000 12.87 0.00 44.40 2.83
409 410 8.193953 AGGAATAACCAAGTGATTTCACAAAT 57.806 30.769 12.87 0.00 44.40 2.32
410 411 8.650490 AGGAATAACCAAGTGATTTCACAAATT 58.350 29.630 12.87 4.64 44.40 1.82
411 412 9.921637 GGAATAACCAAGTGATTTCACAAATTA 57.078 29.630 12.87 6.39 42.84 1.40
450 451 8.188531 GTGATTTCACAAATTTCATGGTATGG 57.811 34.615 5.84 0.00 45.75 2.74
451 452 6.817641 TGATTTCACAAATTTCATGGTATGGC 59.182 34.615 0.00 0.00 0.00 4.40
452 453 5.999205 TTCACAAATTTCATGGTATGGCT 57.001 34.783 0.00 0.00 0.00 4.75
453 454 5.581126 TCACAAATTTCATGGTATGGCTC 57.419 39.130 0.00 0.00 0.00 4.70
454 455 4.096231 TCACAAATTTCATGGTATGGCTCG 59.904 41.667 0.00 0.00 0.00 5.03
455 456 4.096231 CACAAATTTCATGGTATGGCTCGA 59.904 41.667 0.00 0.00 0.00 4.04
456 457 4.889409 ACAAATTTCATGGTATGGCTCGAT 59.111 37.500 0.00 0.00 0.00 3.59
457 458 5.217393 CAAATTTCATGGTATGGCTCGATG 58.783 41.667 0.00 0.00 0.00 3.84
458 459 3.836365 TTTCATGGTATGGCTCGATGA 57.164 42.857 0.00 0.00 0.00 2.92
459 460 3.836365 TTCATGGTATGGCTCGATGAA 57.164 42.857 0.00 9.56 37.56 2.57
460 461 3.391506 TCATGGTATGGCTCGATGAAG 57.608 47.619 0.00 0.00 29.79 3.02
461 462 1.802960 CATGGTATGGCTCGATGAAGC 59.197 52.381 0.00 0.00 41.73 3.86
462 463 0.829990 TGGTATGGCTCGATGAAGCA 59.170 50.000 0.00 0.00 44.35 3.91
463 464 1.417517 TGGTATGGCTCGATGAAGCAT 59.582 47.619 0.00 0.00 44.35 3.79
464 465 2.632512 TGGTATGGCTCGATGAAGCATA 59.367 45.455 0.00 0.00 44.35 3.14
465 466 2.996621 GGTATGGCTCGATGAAGCATAC 59.003 50.000 0.00 0.00 44.35 2.39
466 467 3.306364 GGTATGGCTCGATGAAGCATACT 60.306 47.826 0.00 0.00 44.35 2.12
467 468 2.229675 TGGCTCGATGAAGCATACTG 57.770 50.000 0.00 0.00 44.35 2.74
468 469 1.756538 TGGCTCGATGAAGCATACTGA 59.243 47.619 0.00 0.00 44.35 3.41
469 470 2.223900 TGGCTCGATGAAGCATACTGAG 60.224 50.000 0.00 0.00 44.35 3.35
470 471 2.035193 GGCTCGATGAAGCATACTGAGA 59.965 50.000 0.00 0.00 44.35 3.27
471 472 3.307674 GCTCGATGAAGCATACTGAGAG 58.692 50.000 0.00 0.00 42.05 3.20
472 473 3.243367 GCTCGATGAAGCATACTGAGAGT 60.243 47.826 0.00 0.00 42.05 3.24
473 474 4.023622 GCTCGATGAAGCATACTGAGAGTA 60.024 45.833 0.00 0.00 42.05 2.59
474 475 5.335583 GCTCGATGAAGCATACTGAGAGTAT 60.336 44.000 0.00 0.00 41.82 2.12
475 476 6.128145 GCTCGATGAAGCATACTGAGAGTATA 60.128 42.308 0.00 0.00 39.26 1.47
476 477 7.415095 GCTCGATGAAGCATACTGAGAGTATAT 60.415 40.741 0.00 0.00 39.26 0.86
477 478 8.341892 TCGATGAAGCATACTGAGAGTATATT 57.658 34.615 0.00 0.00 39.26 1.28
478 479 8.454894 TCGATGAAGCATACTGAGAGTATATTC 58.545 37.037 0.00 0.00 39.26 1.75
479 480 7.700234 CGATGAAGCATACTGAGAGTATATTCC 59.300 40.741 13.26 4.43 39.26 3.01
480 481 8.663209 ATGAAGCATACTGAGAGTATATTCCT 57.337 34.615 13.26 6.03 39.26 3.36
481 482 8.484214 TGAAGCATACTGAGAGTATATTCCTT 57.516 34.615 13.26 7.50 39.26 3.36
482 483 8.363390 TGAAGCATACTGAGAGTATATTCCTTG 58.637 37.037 13.26 0.00 39.26 3.61
483 484 8.484214 AAGCATACTGAGAGTATATTCCTTGA 57.516 34.615 0.00 0.00 39.26 3.02
484 485 8.121305 AGCATACTGAGAGTATATTCCTTGAG 57.879 38.462 0.00 0.00 39.26 3.02
485 486 7.947332 AGCATACTGAGAGTATATTCCTTGAGA 59.053 37.037 0.00 0.00 39.26 3.27
486 487 8.580720 GCATACTGAGAGTATATTCCTTGAGAA 58.419 37.037 0.00 0.00 39.26 2.87
489 490 8.774546 ACTGAGAGTATATTCCTTGAGAATGA 57.225 34.615 0.00 0.00 45.11 2.57
490 491 8.637986 ACTGAGAGTATATTCCTTGAGAATGAC 58.362 37.037 0.00 0.00 45.11 3.06
491 492 8.774546 TGAGAGTATATTCCTTGAGAATGACT 57.225 34.615 0.00 2.28 45.11 3.41
492 493 9.868160 TGAGAGTATATTCCTTGAGAATGACTA 57.132 33.333 0.00 0.00 45.11 2.59
500 501 8.868522 ATTCCTTGAGAATGACTAAATTGTGA 57.131 30.769 0.00 0.00 43.81 3.58
501 502 8.868522 TTCCTTGAGAATGACTAAATTGTGAT 57.131 30.769 0.00 0.00 0.00 3.06
502 503 8.868522 TCCTTGAGAATGACTAAATTGTGATT 57.131 30.769 0.00 0.00 0.00 2.57
503 504 8.950210 TCCTTGAGAATGACTAAATTGTGATTC 58.050 33.333 1.43 1.43 39.62 2.52
504 505 8.186821 CCTTGAGAATGACTAAATTGTGATTCC 58.813 37.037 5.03 0.10 39.98 3.01
505 506 8.634335 TTGAGAATGACTAAATTGTGATTCCA 57.366 30.769 5.03 2.03 39.98 3.53
506 507 8.812513 TGAGAATGACTAAATTGTGATTCCAT 57.187 30.769 5.03 0.00 39.98 3.41
507 508 9.904198 TGAGAATGACTAAATTGTGATTCCATA 57.096 29.630 5.03 0.00 39.98 2.74
509 510 9.125026 AGAATGACTAAATTGTGATTCCATACC 57.875 33.333 5.03 0.00 39.98 2.73
510 511 8.821686 AATGACTAAATTGTGATTCCATACCA 57.178 30.769 0.00 0.00 0.00 3.25
511 512 8.821686 ATGACTAAATTGTGATTCCATACCAA 57.178 30.769 0.00 0.00 0.00 3.67
512 513 8.050778 TGACTAAATTGTGATTCCATACCAAC 57.949 34.615 0.00 0.00 0.00 3.77
513 514 7.122055 TGACTAAATTGTGATTCCATACCAACC 59.878 37.037 0.00 0.00 0.00 3.77
514 515 6.951198 ACTAAATTGTGATTCCATACCAACCA 59.049 34.615 0.00 0.00 0.00 3.67
515 516 6.678568 AAATTGTGATTCCATACCAACCAA 57.321 33.333 0.00 0.00 0.00 3.67
516 517 6.678568 AATTGTGATTCCATACCAACCAAA 57.321 33.333 0.00 0.00 0.00 3.28
517 518 5.461032 TTGTGATTCCATACCAACCAAAC 57.539 39.130 0.00 0.00 0.00 2.93
518 519 4.474394 TGTGATTCCATACCAACCAAACA 58.526 39.130 0.00 0.00 0.00 2.83
519 520 4.895889 TGTGATTCCATACCAACCAAACAA 59.104 37.500 0.00 0.00 0.00 2.83
520 521 5.541868 TGTGATTCCATACCAACCAAACAAT 59.458 36.000 0.00 0.00 0.00 2.71
521 522 5.868801 GTGATTCCATACCAACCAAACAATG 59.131 40.000 0.00 0.00 0.00 2.82
544 545 6.101332 TGGAATGAAATGCTAGCAATGAAAC 58.899 36.000 23.54 10.52 0.00 2.78
550 551 1.892474 TGCTAGCAATGAAACCAACCC 59.108 47.619 16.84 0.00 0.00 4.11
560 561 0.763035 AAACCAACCCGTCTAGTGCT 59.237 50.000 0.00 0.00 0.00 4.40
562 563 1.741770 CCAACCCGTCTAGTGCTGC 60.742 63.158 0.00 0.00 0.00 5.25
563 564 1.293498 CAACCCGTCTAGTGCTGCT 59.707 57.895 0.00 0.00 0.00 4.24
564 565 0.530744 CAACCCGTCTAGTGCTGCTA 59.469 55.000 0.00 0.00 0.00 3.49
565 566 1.137086 CAACCCGTCTAGTGCTGCTAT 59.863 52.381 0.00 0.00 0.00 2.97
566 567 2.359981 ACCCGTCTAGTGCTGCTATA 57.640 50.000 0.00 0.00 0.00 1.31
567 568 2.877866 ACCCGTCTAGTGCTGCTATAT 58.122 47.619 0.00 0.00 0.00 0.86
579 580 6.520272 AGTGCTGCTATATCCTCTAACAAAG 58.480 40.000 0.00 0.00 0.00 2.77
740 743 0.820871 GCTCAGTGAGGGGACTGTAG 59.179 60.000 21.54 0.00 44.43 2.74
1095 1145 2.844362 CTCGCCCCAGCCCAGATA 60.844 66.667 0.00 0.00 34.57 1.98
1096 1146 3.161450 TCGCCCCAGCCCAGATAC 61.161 66.667 0.00 0.00 34.57 2.24
1097 1147 3.479203 CGCCCCAGCCCAGATACA 61.479 66.667 0.00 0.00 34.57 2.29
1098 1148 2.193248 GCCCCAGCCCAGATACAC 59.807 66.667 0.00 0.00 0.00 2.90
1099 1149 2.919043 CCCCAGCCCAGATACACC 59.081 66.667 0.00 0.00 0.00 4.16
1100 1150 2.757124 CCCCAGCCCAGATACACCC 61.757 68.421 0.00 0.00 0.00 4.61
1101 1151 2.757124 CCCAGCCCAGATACACCCC 61.757 68.421 0.00 0.00 0.00 4.95
1102 1152 2.757124 CCAGCCCAGATACACCCCC 61.757 68.421 0.00 0.00 0.00 5.40
1103 1153 2.000701 CAGCCCAGATACACCCCCA 61.001 63.158 0.00 0.00 0.00 4.96
1215 1270 4.683334 GCAACGGGAAGCACGCAC 62.683 66.667 0.00 0.00 34.00 5.34
1354 1409 1.877617 CTGCTGCTACTGCTCTCGC 60.878 63.158 0.00 0.00 40.48 5.03
1356 1411 1.153667 GCTGCTACTGCTCTCGCTT 60.154 57.895 0.00 0.00 40.48 4.68
1380 1438 1.384525 TTAGTTGTTGTGCTTGGCGT 58.615 45.000 0.00 0.00 0.00 5.68
1444 1502 9.231297 CATTCTCTTGTATTAAAAGACCCAAGA 57.769 33.333 0.00 0.00 36.79 3.02
1521 1583 8.474710 TTGACCTAGTCTAGTTTAGTTGTTCT 57.525 34.615 6.15 0.00 33.15 3.01
1634 1697 9.490663 GAATGAACAATTTACTAATTCTCACCG 57.509 33.333 0.00 0.00 31.63 4.94
1635 1698 7.972832 TGAACAATTTACTAATTCTCACCGT 57.027 32.000 0.00 0.00 31.63 4.83
1644 1707 1.078709 ATTCTCACCGTGCAATGTCG 58.921 50.000 0.00 0.00 0.00 4.35
1648 1711 1.464608 CTCACCGTGCAATGTCGAAAT 59.535 47.619 0.00 0.00 0.00 2.17
1662 1725 4.503910 TGTCGAAATCCCTCTGTACATTG 58.496 43.478 0.00 0.00 0.00 2.82
1667 1730 6.592607 TCGAAATCCCTCTGTACATTGTAAAC 59.407 38.462 0.00 0.00 0.00 2.01
1684 1747 2.685850 AACGCCCTGTATGAACTACC 57.314 50.000 0.00 0.00 0.00 3.18
1693 1756 6.183360 GCCCTGTATGAACTACCACTATTACA 60.183 42.308 0.00 0.00 0.00 2.41
1694 1757 7.472945 GCCCTGTATGAACTACCACTATTACAT 60.473 40.741 0.00 0.00 0.00 2.29
1695 1758 9.085645 CCCTGTATGAACTACCACTATTACATA 57.914 37.037 0.00 0.00 0.00 2.29
1736 1825 5.659525 TCATACTCGGGTATTTTCTTCAGGA 59.340 40.000 4.85 0.00 36.60 3.86
1769 1858 0.668706 CACGCTGAGGAGACACTTGG 60.669 60.000 0.00 0.00 0.00 3.61
1770 1859 1.079543 CGCTGAGGAGACACTTGGG 60.080 63.158 0.00 0.00 0.00 4.12
1812 1901 0.243636 CAACGTTTCTTGGGGATGCC 59.756 55.000 0.00 0.00 0.00 4.40
1813 1902 0.112412 AACGTTTCTTGGGGATGCCT 59.888 50.000 2.19 0.00 0.00 4.75
1814 1903 0.112412 ACGTTTCTTGGGGATGCCTT 59.888 50.000 2.19 0.00 0.00 4.35
1843 1932 2.590821 ACTGCTCTGTTTTGCTTGGAT 58.409 42.857 0.00 0.00 0.00 3.41
1860 1949 1.000283 GGATGGGAGATGCAGAGTACG 60.000 57.143 0.00 0.00 0.00 3.67
1861 1950 0.390860 ATGGGAGATGCAGAGTACGC 59.609 55.000 0.00 0.00 0.00 4.42
1862 1951 1.068250 GGGAGATGCAGAGTACGCC 59.932 63.158 0.00 0.00 0.00 5.68
1877 1966 0.108329 ACGCCAAGTACAAGGATCCG 60.108 55.000 5.98 0.00 0.00 4.18
2066 2155 4.319477 GCTTAGTGCAAGAATGTTGTTCGA 60.319 41.667 0.00 0.00 42.31 3.71
2082 2171 3.926527 TGTTCGATAGCTCACACATGTTC 59.073 43.478 0.00 0.00 0.00 3.18
2104 2193 1.203523 CTATCCTGCATCCGGAGTAGC 59.796 57.143 11.34 14.70 33.29 3.58
2111 2206 1.009829 CATCCGGAGTAGCTGTTTGC 58.990 55.000 11.34 0.00 43.29 3.68
2128 2223 0.455410 TGCAGGTTGACAGCACAAAC 59.545 50.000 0.00 0.00 37.69 2.93
2143 2238 4.161377 AGCACAAACCTTTAACACCACATT 59.839 37.500 0.00 0.00 0.00 2.71
2236 2331 4.934356 AGGCAATTCAACTTCTAATCCCA 58.066 39.130 0.00 0.00 0.00 4.37
2627 2722 4.037565 TCAATGAGCATTTCATCTCCATGC 59.962 41.667 0.00 0.00 45.82 4.06
3145 3242 8.197439 TCTCAGTGTTAATGTGTATGGTAGATG 58.803 37.037 0.00 0.00 0.00 2.90
3236 3333 3.386078 TCTGCCTAGATGGACATTCTGTC 59.614 47.826 0.00 0.00 46.23 3.51
3454 3552 6.889301 ACGCATAATGGAATCAATGAGAAT 57.111 33.333 0.00 0.00 0.00 2.40
3687 3785 3.059800 GCTGTTGTCGTAAACTGACTTCC 60.060 47.826 11.76 0.00 37.26 3.46
3784 3882 5.869344 TGCAAACTATACTTACTCTGTGCAG 59.131 40.000 0.00 0.00 33.64 4.41
3791 3889 0.610174 TTACTCTGTGCAGGCTGGAG 59.390 55.000 17.64 15.78 0.00 3.86
4009 4116 5.295540 GGACTCCATTTCTTGCATCTAAGAC 59.704 44.000 0.00 0.00 36.48 3.01
4134 4241 2.158682 TGGTACTGCAACATGAAGTGGT 60.159 45.455 0.00 0.00 36.76 4.16
4135 4242 2.884639 GGTACTGCAACATGAAGTGGTT 59.115 45.455 0.00 0.00 36.76 3.67
4136 4243 4.069304 GGTACTGCAACATGAAGTGGTTA 58.931 43.478 0.00 0.00 36.76 2.85
4137 4244 4.154195 GGTACTGCAACATGAAGTGGTTAG 59.846 45.833 0.00 0.00 36.76 2.34
4138 4245 3.820557 ACTGCAACATGAAGTGGTTAGT 58.179 40.909 0.00 0.00 34.21 2.24
4139 4246 4.968259 ACTGCAACATGAAGTGGTTAGTA 58.032 39.130 0.00 0.00 34.21 1.82
4140 4247 4.755123 ACTGCAACATGAAGTGGTTAGTAC 59.245 41.667 0.00 0.00 34.21 2.73
4158 4265 8.734386 GGTTAGTACTTAGTACTTACTGAGCAA 58.266 37.037 28.74 15.18 45.68 3.91
4656 4764 5.874093 AGTCATGCTAGCAATTTAGGCTAT 58.126 37.500 23.54 0.00 42.51 2.97
4720 4828 1.275291 ACATTACAGCTGGTACGTGCT 59.725 47.619 19.93 5.55 41.01 4.40
4721 4829 2.289444 ACATTACAGCTGGTACGTGCTT 60.289 45.455 19.93 0.00 38.57 3.91
5169 5277 2.116736 AATGCGCAGTGGTTGTCGTG 62.117 55.000 18.32 0.00 0.00 4.35
5257 5365 3.077907 GCACAGAAGGCCAGGGTA 58.922 61.111 5.01 0.00 0.00 3.69
5283 5391 4.747931 GCTGATGTGCTATTTGGGGACTAT 60.748 45.833 0.00 0.00 0.00 2.12
5310 5418 2.126850 GGAAAGCTTTCGCGCACC 60.127 61.111 28.17 13.78 42.32 5.01
5325 5433 0.947244 GCACCTGGTTCAAGTCTGTG 59.053 55.000 0.00 0.00 0.00 3.66
5328 5436 2.057922 ACCTGGTTCAAGTCTGTGGAT 58.942 47.619 0.00 0.00 0.00 3.41
5379 5487 2.338577 ATGATCCGCTCTTCCCTTTG 57.661 50.000 0.00 0.00 0.00 2.77
5395 5503 1.330655 TTTGGGCTTCGGTTTGGCAA 61.331 50.000 0.00 0.00 0.00 4.52
5460 5568 1.474077 CTGAAACAATGCTACAGGCCC 59.526 52.381 0.00 0.00 40.92 5.80
5476 5584 4.141344 ACAGGCCCAGTTTGAACTACTTTA 60.141 41.667 0.00 0.00 37.08 1.85
5477 5585 4.825085 CAGGCCCAGTTTGAACTACTTTAA 59.175 41.667 0.00 0.00 37.08 1.52
5524 5632 1.301401 CGTTTCAGGTTCTCGGGCA 60.301 57.895 0.00 0.00 0.00 5.36
5593 5701 5.550290 TGAGTTTGCTACTGTCAATGATGA 58.450 37.500 0.00 0.00 37.17 2.92
5618 5726 3.316308 GCTTGGGCATAGGTGTATTTCAG 59.684 47.826 0.00 0.00 38.54 3.02
5729 5837 2.364647 GGCGTTATGCTAACCTAGGTCT 59.635 50.000 16.64 8.31 45.43 3.85
5789 6077 5.812652 TGGTTCACGTCTTGTATTTGTTTC 58.187 37.500 0.00 0.00 0.00 2.78
5820 6111 6.254522 AGTGGTGAGGACAAAGTAGTAGTAT 58.745 40.000 0.00 0.00 0.00 2.12
5866 6157 6.135290 TGTTGGATAATGAATTACAGCAGC 57.865 37.500 0.00 0.00 0.00 5.25
5982 6275 5.671493 ACCCAAAGATGGTCTACGATTTAG 58.329 41.667 0.00 0.00 46.01 1.85
6004 6297 4.112634 GCGCTGAATCTGTCATAACTGTA 58.887 43.478 0.00 0.00 35.07 2.74
6098 6394 4.555709 TTGTCGCGGGTGTTGCCT 62.556 61.111 6.13 0.00 37.43 4.75
6507 6813 1.187974 CATGGGGAAAAGCATGAGCA 58.812 50.000 0.00 0.00 45.49 4.26
6532 6838 4.457603 CACCAGTGGAACCGAAAATATCAA 59.542 41.667 18.40 0.00 37.80 2.57
6533 6839 5.125417 CACCAGTGGAACCGAAAATATCAAT 59.875 40.000 18.40 0.00 37.80 2.57
6539 6845 6.912591 GTGGAACCGAAAATATCAATAGCAAG 59.087 38.462 0.00 0.00 0.00 4.01
6540 6846 5.915196 GGAACCGAAAATATCAATAGCAAGC 59.085 40.000 0.00 0.00 0.00 4.01
6671 6992 1.112113 GCTCCAGGTCGAAGTCCATA 58.888 55.000 0.00 0.00 38.46 2.74
6687 7008 4.466370 AGTCCATACTTCGATCTTGGTTGA 59.534 41.667 0.00 0.00 29.00 3.18
6705 7027 5.473504 TGGTTGACCTGAATCTTTTTCTAGC 59.526 40.000 1.34 0.00 36.82 3.42
6727 7049 3.069586 CCTATACGATTGAGAGCCCAACA 59.930 47.826 0.00 0.00 0.00 3.33
6728 7050 2.672961 TACGATTGAGAGCCCAACAG 57.327 50.000 0.00 0.00 0.00 3.16
6775 7106 1.597027 CCCGAGGCAGTTCGTTTGT 60.597 57.895 4.25 0.00 38.88 2.83
6776 7107 1.164041 CCCGAGGCAGTTCGTTTGTT 61.164 55.000 4.25 0.00 38.88 2.83
6777 7108 0.661020 CCGAGGCAGTTCGTTTGTTT 59.339 50.000 4.25 0.00 38.88 2.83
6778 7109 1.596954 CCGAGGCAGTTCGTTTGTTTG 60.597 52.381 4.25 0.00 38.88 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.446222 CCCACCGACAATGCTAAACG 59.554 55.000 0.00 0.00 0.00 3.60
1 2 0.170339 GCCCACCGACAATGCTAAAC 59.830 55.000 0.00 0.00 0.00 2.01
2 3 0.250945 TGCCCACCGACAATGCTAAA 60.251 50.000 0.00 0.00 0.00 1.85
3 4 0.034574 ATGCCCACCGACAATGCTAA 60.035 50.000 0.00 0.00 0.00 3.09
4 5 0.747644 CATGCCCACCGACAATGCTA 60.748 55.000 0.00 0.00 0.00 3.49
5 6 2.048023 CATGCCCACCGACAATGCT 61.048 57.895 0.00 0.00 0.00 3.79
6 7 2.342650 ACATGCCCACCGACAATGC 61.343 57.895 0.00 0.00 0.00 3.56
7 8 1.507630 CACATGCCCACCGACAATG 59.492 57.895 0.00 0.00 0.00 2.82
8 9 1.678635 CCACATGCCCACCGACAAT 60.679 57.895 0.00 0.00 0.00 2.71
9 10 2.282110 CCACATGCCCACCGACAA 60.282 61.111 0.00 0.00 0.00 3.18
10 11 3.245346 TCCACATGCCCACCGACA 61.245 61.111 0.00 0.00 0.00 4.35
11 12 2.436646 CTCCACATGCCCACCGAC 60.437 66.667 0.00 0.00 0.00 4.79
12 13 3.716195 CCTCCACATGCCCACCGA 61.716 66.667 0.00 0.00 0.00 4.69
13 14 4.033776 ACCTCCACATGCCCACCG 62.034 66.667 0.00 0.00 0.00 4.94
14 15 2.361610 CACCTCCACATGCCCACC 60.362 66.667 0.00 0.00 0.00 4.61
15 16 1.973281 CACACCTCCACATGCCCAC 60.973 63.158 0.00 0.00 0.00 4.61
16 17 2.410322 GACACACCTCCACATGCCCA 62.410 60.000 0.00 0.00 0.00 5.36
17 18 1.675641 GACACACCTCCACATGCCC 60.676 63.158 0.00 0.00 0.00 5.36
18 19 0.674895 GAGACACACCTCCACATGCC 60.675 60.000 0.00 0.00 0.00 4.40
19 20 2.846371 GAGACACACCTCCACATGC 58.154 57.895 0.00 0.00 0.00 4.06
26 27 0.753262 ATATGCCGGAGACACACCTC 59.247 55.000 5.05 0.00 0.00 3.85
27 28 1.204146 AATATGCCGGAGACACACCT 58.796 50.000 5.05 0.00 0.00 4.00
28 29 1.670811 CAAATATGCCGGAGACACACC 59.329 52.381 5.05 0.00 0.00 4.16
29 30 2.351726 GACAAATATGCCGGAGACACAC 59.648 50.000 5.05 0.00 0.00 3.82
30 31 2.236146 AGACAAATATGCCGGAGACACA 59.764 45.455 5.05 0.00 0.00 3.72
31 32 2.906354 AGACAAATATGCCGGAGACAC 58.094 47.619 5.05 0.00 0.00 3.67
32 33 3.627395 AAGACAAATATGCCGGAGACA 57.373 42.857 5.05 0.00 0.00 3.41
33 34 3.065371 CCAAAGACAAATATGCCGGAGAC 59.935 47.826 5.05 0.00 0.00 3.36
34 35 3.278574 CCAAAGACAAATATGCCGGAGA 58.721 45.455 5.05 0.00 0.00 3.71
35 36 3.016736 ACCAAAGACAAATATGCCGGAG 58.983 45.455 5.05 0.00 0.00 4.63
36 37 2.752354 CACCAAAGACAAATATGCCGGA 59.248 45.455 5.05 0.00 0.00 5.14
37 38 2.752354 TCACCAAAGACAAATATGCCGG 59.248 45.455 0.00 0.00 0.00 6.13
38 39 4.433186 TTCACCAAAGACAAATATGCCG 57.567 40.909 0.00 0.00 0.00 5.69
39 40 6.402442 GCAAATTCACCAAAGACAAATATGCC 60.402 38.462 0.00 0.00 0.00 4.40
40 41 6.369615 AGCAAATTCACCAAAGACAAATATGC 59.630 34.615 0.00 0.00 0.00 3.14
41 42 7.201376 CGAGCAAATTCACCAAAGACAAATATG 60.201 37.037 0.00 0.00 0.00 1.78
42 43 6.808212 CGAGCAAATTCACCAAAGACAAATAT 59.192 34.615 0.00 0.00 0.00 1.28
43 44 6.148948 CGAGCAAATTCACCAAAGACAAATA 58.851 36.000 0.00 0.00 0.00 1.40
44 45 4.984161 CGAGCAAATTCACCAAAGACAAAT 59.016 37.500 0.00 0.00 0.00 2.32
45 46 4.358851 CGAGCAAATTCACCAAAGACAAA 58.641 39.130 0.00 0.00 0.00 2.83
46 47 3.243367 CCGAGCAAATTCACCAAAGACAA 60.243 43.478 0.00 0.00 0.00 3.18
47 48 2.293122 CCGAGCAAATTCACCAAAGACA 59.707 45.455 0.00 0.00 0.00 3.41
48 49 2.552315 TCCGAGCAAATTCACCAAAGAC 59.448 45.455 0.00 0.00 0.00 3.01
49 50 2.857483 TCCGAGCAAATTCACCAAAGA 58.143 42.857 0.00 0.00 0.00 2.52
50 51 3.441572 AGATCCGAGCAAATTCACCAAAG 59.558 43.478 0.00 0.00 0.00 2.77
51 52 3.420893 AGATCCGAGCAAATTCACCAAA 58.579 40.909 0.00 0.00 0.00 3.28
52 53 3.071874 AGATCCGAGCAAATTCACCAA 57.928 42.857 0.00 0.00 0.00 3.67
53 54 2.787473 AGATCCGAGCAAATTCACCA 57.213 45.000 0.00 0.00 0.00 4.17
54 55 4.816385 TGAATAGATCCGAGCAAATTCACC 59.184 41.667 9.24 0.00 30.59 4.02
55 56 5.991328 TGAATAGATCCGAGCAAATTCAC 57.009 39.130 9.24 0.00 30.59 3.18
56 57 5.406477 CGATGAATAGATCCGAGCAAATTCA 59.594 40.000 13.54 13.54 37.64 2.57
57 58 5.406780 ACGATGAATAGATCCGAGCAAATTC 59.593 40.000 0.00 5.31 0.00 2.17
58 59 5.300752 ACGATGAATAGATCCGAGCAAATT 58.699 37.500 0.00 0.00 0.00 1.82
59 60 4.887748 ACGATGAATAGATCCGAGCAAAT 58.112 39.130 0.00 0.00 0.00 2.32
60 61 4.322080 ACGATGAATAGATCCGAGCAAA 57.678 40.909 0.00 0.00 0.00 3.68
61 62 4.322080 AACGATGAATAGATCCGAGCAA 57.678 40.909 0.00 0.00 0.00 3.91
62 63 4.322080 AAACGATGAATAGATCCGAGCA 57.678 40.909 0.00 0.00 0.00 4.26
63 64 5.864474 ACATAAACGATGAATAGATCCGAGC 59.136 40.000 0.00 0.00 39.06 5.03
64 65 7.810282 AGAACATAAACGATGAATAGATCCGAG 59.190 37.037 0.00 0.00 39.06 4.63
65 66 7.658261 AGAACATAAACGATGAATAGATCCGA 58.342 34.615 0.00 0.00 39.06 4.55
66 67 7.875316 AGAACATAAACGATGAATAGATCCG 57.125 36.000 0.00 0.00 39.06 4.18
67 68 9.046296 ACAAGAACATAAACGATGAATAGATCC 57.954 33.333 0.00 0.00 39.06 3.36
68 69 9.855361 CACAAGAACATAAACGATGAATAGATC 57.145 33.333 0.00 0.00 39.06 2.75
69 70 9.383519 ACACAAGAACATAAACGATGAATAGAT 57.616 29.630 0.00 0.00 39.06 1.98
70 71 8.771920 ACACAAGAACATAAACGATGAATAGA 57.228 30.769 0.00 0.00 39.06 1.98
71 72 8.873830 AGACACAAGAACATAAACGATGAATAG 58.126 33.333 0.00 0.00 39.06 1.73
72 73 8.771920 AGACACAAGAACATAAACGATGAATA 57.228 30.769 0.00 0.00 39.06 1.75
73 74 7.672983 AGACACAAGAACATAAACGATGAAT 57.327 32.000 0.00 0.00 39.06 2.57
74 75 7.225734 TGAAGACACAAGAACATAAACGATGAA 59.774 33.333 0.00 0.00 39.06 2.57
75 76 6.704050 TGAAGACACAAGAACATAAACGATGA 59.296 34.615 0.00 0.00 39.06 2.92
76 77 6.887368 TGAAGACACAAGAACATAAACGATG 58.113 36.000 0.00 0.00 41.79 3.84
77 78 6.147821 CCTGAAGACACAAGAACATAAACGAT 59.852 38.462 0.00 0.00 0.00 3.73
78 79 5.465390 CCTGAAGACACAAGAACATAAACGA 59.535 40.000 0.00 0.00 0.00 3.85
79 80 5.236478 ACCTGAAGACACAAGAACATAAACG 59.764 40.000 0.00 0.00 0.00 3.60
80 81 6.619801 ACCTGAAGACACAAGAACATAAAC 57.380 37.500 0.00 0.00 0.00 2.01
81 82 6.039270 CCAACCTGAAGACACAAGAACATAAA 59.961 38.462 0.00 0.00 0.00 1.40
82 83 5.530915 CCAACCTGAAGACACAAGAACATAA 59.469 40.000 0.00 0.00 0.00 1.90
83 84 5.063204 CCAACCTGAAGACACAAGAACATA 58.937 41.667 0.00 0.00 0.00 2.29
84 85 3.885297 CCAACCTGAAGACACAAGAACAT 59.115 43.478 0.00 0.00 0.00 2.71
85 86 3.054728 TCCAACCTGAAGACACAAGAACA 60.055 43.478 0.00 0.00 0.00 3.18
86 87 3.541632 TCCAACCTGAAGACACAAGAAC 58.458 45.455 0.00 0.00 0.00 3.01
87 88 3.924114 TCCAACCTGAAGACACAAGAA 57.076 42.857 0.00 0.00 0.00 2.52
88 89 3.244561 GGATCCAACCTGAAGACACAAGA 60.245 47.826 6.95 0.00 0.00 3.02
89 90 3.077359 GGATCCAACCTGAAGACACAAG 58.923 50.000 6.95 0.00 0.00 3.16
90 91 2.711009 AGGATCCAACCTGAAGACACAA 59.289 45.455 15.82 0.00 39.01 3.33
91 92 2.338809 AGGATCCAACCTGAAGACACA 58.661 47.619 15.82 0.00 39.01 3.72
92 93 3.008485 AGAAGGATCCAACCTGAAGACAC 59.992 47.826 15.82 0.00 40.49 3.67
93 94 3.008375 CAGAAGGATCCAACCTGAAGACA 59.992 47.826 15.82 0.00 40.49 3.41
94 95 3.604582 CAGAAGGATCCAACCTGAAGAC 58.395 50.000 15.82 0.00 40.49 3.01
95 96 2.026822 GCAGAAGGATCCAACCTGAAGA 60.027 50.000 23.71 0.00 40.49 2.87
96 97 2.026449 AGCAGAAGGATCCAACCTGAAG 60.026 50.000 23.71 5.35 40.49 3.02
97 98 1.988107 AGCAGAAGGATCCAACCTGAA 59.012 47.619 23.71 0.00 40.49 3.02
98 99 1.661463 AGCAGAAGGATCCAACCTGA 58.339 50.000 23.71 0.00 40.49 3.86
99 100 2.503895 AAGCAGAAGGATCCAACCTG 57.496 50.000 15.82 17.36 40.49 4.00
100 101 3.330701 TGTAAAGCAGAAGGATCCAACCT 59.669 43.478 15.82 4.58 42.69 3.50
101 102 3.440522 GTGTAAAGCAGAAGGATCCAACC 59.559 47.826 15.82 2.02 0.00 3.77
102 103 4.327680 AGTGTAAAGCAGAAGGATCCAAC 58.672 43.478 15.82 7.32 0.00 3.77
103 104 4.287067 AGAGTGTAAAGCAGAAGGATCCAA 59.713 41.667 15.82 0.00 0.00 3.53
104 105 3.840666 AGAGTGTAAAGCAGAAGGATCCA 59.159 43.478 15.82 0.00 0.00 3.41
105 106 4.479786 AGAGTGTAAAGCAGAAGGATCC 57.520 45.455 2.48 2.48 0.00 3.36
106 107 5.482908 TGAAGAGTGTAAAGCAGAAGGATC 58.517 41.667 0.00 0.00 0.00 3.36
107 108 5.489792 TGAAGAGTGTAAAGCAGAAGGAT 57.510 39.130 0.00 0.00 0.00 3.24
108 109 4.955811 TGAAGAGTGTAAAGCAGAAGGA 57.044 40.909 0.00 0.00 0.00 3.36
109 110 5.106396 CCAATGAAGAGTGTAAAGCAGAAGG 60.106 44.000 0.00 0.00 0.00 3.46
110 111 5.618640 GCCAATGAAGAGTGTAAAGCAGAAG 60.619 44.000 0.00 0.00 0.00 2.85
111 112 4.216257 GCCAATGAAGAGTGTAAAGCAGAA 59.784 41.667 0.00 0.00 0.00 3.02
112 113 3.753272 GCCAATGAAGAGTGTAAAGCAGA 59.247 43.478 0.00 0.00 0.00 4.26
113 114 3.425359 CGCCAATGAAGAGTGTAAAGCAG 60.425 47.826 0.00 0.00 0.00 4.24
114 115 2.483877 CGCCAATGAAGAGTGTAAAGCA 59.516 45.455 0.00 0.00 0.00 3.91
115 116 2.159517 CCGCCAATGAAGAGTGTAAAGC 60.160 50.000 0.00 0.00 0.00 3.51
116 117 2.159517 GCCGCCAATGAAGAGTGTAAAG 60.160 50.000 0.00 0.00 0.00 1.85
117 118 1.810151 GCCGCCAATGAAGAGTGTAAA 59.190 47.619 0.00 0.00 0.00 2.01
118 119 1.448985 GCCGCCAATGAAGAGTGTAA 58.551 50.000 0.00 0.00 0.00 2.41
119 120 0.739462 CGCCGCCAATGAAGAGTGTA 60.739 55.000 0.00 0.00 0.00 2.90
120 121 2.034879 CGCCGCCAATGAAGAGTGT 61.035 57.895 0.00 0.00 0.00 3.55
121 122 1.577328 AACGCCGCCAATGAAGAGTG 61.577 55.000 0.00 0.00 0.00 3.51
122 123 0.889186 AAACGCCGCCAATGAAGAGT 60.889 50.000 0.00 0.00 0.00 3.24
123 124 0.454957 CAAACGCCGCCAATGAAGAG 60.455 55.000 0.00 0.00 0.00 2.85
124 125 1.578926 CAAACGCCGCCAATGAAGA 59.421 52.632 0.00 0.00 0.00 2.87
125 126 2.088178 GCAAACGCCGCCAATGAAG 61.088 57.895 0.00 0.00 0.00 3.02
126 127 2.049618 GCAAACGCCGCCAATGAA 60.050 55.556 0.00 0.00 0.00 2.57
127 128 2.983030 AGCAAACGCCGCCAATGA 60.983 55.556 0.00 0.00 0.00 2.57
128 129 2.806198 CAGCAAACGCCGCCAATG 60.806 61.111 0.00 0.00 0.00 2.82
129 130 2.747507 GAACAGCAAACGCCGCCAAT 62.748 55.000 0.00 0.00 0.00 3.16
130 131 3.477224 GAACAGCAAACGCCGCCAA 62.477 57.895 0.00 0.00 0.00 4.52
131 132 3.959975 GAACAGCAAACGCCGCCA 61.960 61.111 0.00 0.00 0.00 5.69
132 133 3.660111 AGAACAGCAAACGCCGCC 61.660 61.111 0.00 0.00 0.00 6.13
133 134 2.427410 CAGAACAGCAAACGCCGC 60.427 61.111 0.00 0.00 0.00 6.53
134 135 2.252260 CCAGAACAGCAAACGCCG 59.748 61.111 0.00 0.00 0.00 6.46
135 136 1.008538 CACCAGAACAGCAAACGCC 60.009 57.895 0.00 0.00 0.00 5.68
136 137 0.592247 CACACCAGAACAGCAAACGC 60.592 55.000 0.00 0.00 0.00 4.84
137 138 0.732571 ACACACCAGAACAGCAAACG 59.267 50.000 0.00 0.00 0.00 3.60
138 139 2.529151 CAACACACCAGAACAGCAAAC 58.471 47.619 0.00 0.00 0.00 2.93
139 140 1.135141 GCAACACACCAGAACAGCAAA 60.135 47.619 0.00 0.00 0.00 3.68
140 141 0.455410 GCAACACACCAGAACAGCAA 59.545 50.000 0.00 0.00 0.00 3.91
141 142 0.394216 AGCAACACACCAGAACAGCA 60.394 50.000 0.00 0.00 0.00 4.41
142 143 0.740737 AAGCAACACACCAGAACAGC 59.259 50.000 0.00 0.00 0.00 4.40
143 144 2.292267 AGAAGCAACACACCAGAACAG 58.708 47.619 0.00 0.00 0.00 3.16
144 145 2.418368 AGAAGCAACACACCAGAACA 57.582 45.000 0.00 0.00 0.00 3.18
145 146 3.189287 CCATAGAAGCAACACACCAGAAC 59.811 47.826 0.00 0.00 0.00 3.01
146 147 3.411446 CCATAGAAGCAACACACCAGAA 58.589 45.455 0.00 0.00 0.00 3.02
147 148 2.290260 CCCATAGAAGCAACACACCAGA 60.290 50.000 0.00 0.00 0.00 3.86
148 149 2.086869 CCCATAGAAGCAACACACCAG 58.913 52.381 0.00 0.00 0.00 4.00
149 150 1.271871 CCCCATAGAAGCAACACACCA 60.272 52.381 0.00 0.00 0.00 4.17
150 151 1.463674 CCCCATAGAAGCAACACACC 58.536 55.000 0.00 0.00 0.00 4.16
151 152 0.811281 GCCCCATAGAAGCAACACAC 59.189 55.000 0.00 0.00 0.00 3.82
152 153 0.698238 AGCCCCATAGAAGCAACACA 59.302 50.000 0.00 0.00 0.00 3.72
153 154 1.839424 AAGCCCCATAGAAGCAACAC 58.161 50.000 0.00 0.00 0.00 3.32
154 155 2.603075 AAAGCCCCATAGAAGCAACA 57.397 45.000 0.00 0.00 0.00 3.33
155 156 2.359214 GCTAAAGCCCCATAGAAGCAAC 59.641 50.000 0.00 0.00 34.31 4.17
156 157 2.025416 TGCTAAAGCCCCATAGAAGCAA 60.025 45.455 0.00 0.00 41.18 3.91
157 158 1.563879 TGCTAAAGCCCCATAGAAGCA 59.436 47.619 0.00 0.00 41.18 3.91
158 159 1.950216 GTGCTAAAGCCCCATAGAAGC 59.050 52.381 0.00 0.00 41.18 3.86
159 160 2.158957 TCGTGCTAAAGCCCCATAGAAG 60.159 50.000 0.00 0.00 41.18 2.85
160 161 1.834896 TCGTGCTAAAGCCCCATAGAA 59.165 47.619 0.00 0.00 41.18 2.10
161 162 1.138266 GTCGTGCTAAAGCCCCATAGA 59.862 52.381 0.00 0.00 41.18 1.98
162 163 1.583054 GTCGTGCTAAAGCCCCATAG 58.417 55.000 0.00 0.00 41.18 2.23
163 164 0.179094 CGTCGTGCTAAAGCCCCATA 60.179 55.000 0.00 0.00 41.18 2.74
164 165 1.449601 CGTCGTGCTAAAGCCCCAT 60.450 57.895 0.00 0.00 41.18 4.00
165 166 2.047655 CGTCGTGCTAAAGCCCCA 60.048 61.111 0.00 0.00 41.18 4.96
166 167 2.098831 GTCGTCGTGCTAAAGCCCC 61.099 63.158 0.00 0.00 41.18 5.80
167 168 0.669625 AAGTCGTCGTGCTAAAGCCC 60.670 55.000 0.00 0.00 41.18 5.19
168 169 0.714439 GAAGTCGTCGTGCTAAAGCC 59.286 55.000 0.00 0.00 41.18 4.35
169 170 0.714439 GGAAGTCGTCGTGCTAAAGC 59.286 55.000 0.00 0.00 42.50 3.51
170 171 1.347320 GGGAAGTCGTCGTGCTAAAG 58.653 55.000 0.00 0.00 0.00 1.85
171 172 0.387622 CGGGAAGTCGTCGTGCTAAA 60.388 55.000 0.00 0.00 0.00 1.85
172 173 1.210931 CGGGAAGTCGTCGTGCTAA 59.789 57.895 0.00 0.00 0.00 3.09
173 174 1.672030 TCGGGAAGTCGTCGTGCTA 60.672 57.895 0.00 0.00 0.00 3.49
174 175 2.981909 TCGGGAAGTCGTCGTGCT 60.982 61.111 0.00 0.00 0.00 4.40
175 176 2.804090 GTCGGGAAGTCGTCGTGC 60.804 66.667 0.00 0.00 0.00 5.34
176 177 1.442184 CAGTCGGGAAGTCGTCGTG 60.442 63.158 0.00 0.00 0.00 4.35
177 178 1.849976 GACAGTCGGGAAGTCGTCGT 61.850 60.000 0.00 0.00 0.00 4.34
178 179 1.154263 GACAGTCGGGAAGTCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
179 180 1.130186 GTAGACAGTCGGGAAGTCGTC 59.870 57.143 0.00 0.00 37.36 4.20
180 181 1.163554 GTAGACAGTCGGGAAGTCGT 58.836 55.000 0.00 0.00 37.36 4.34
181 182 1.451067 AGTAGACAGTCGGGAAGTCG 58.549 55.000 0.00 0.00 37.36 4.18
182 183 3.341823 TGTAGTAGACAGTCGGGAAGTC 58.658 50.000 0.00 0.00 32.86 3.01
183 184 3.430042 TGTAGTAGACAGTCGGGAAGT 57.570 47.619 0.00 0.00 32.86 3.01
184 185 4.985538 ATTGTAGTAGACAGTCGGGAAG 57.014 45.455 0.00 0.00 39.88 3.46
185 186 5.359009 CCTTATTGTAGTAGACAGTCGGGAA 59.641 44.000 0.00 0.00 39.88 3.97
186 187 4.885907 CCTTATTGTAGTAGACAGTCGGGA 59.114 45.833 0.00 0.00 39.88 5.14
187 188 4.643784 ACCTTATTGTAGTAGACAGTCGGG 59.356 45.833 0.00 0.00 39.88 5.14
188 189 5.831702 ACCTTATTGTAGTAGACAGTCGG 57.168 43.478 0.00 0.00 39.88 4.79
189 190 6.034683 GCAAACCTTATTGTAGTAGACAGTCG 59.965 42.308 0.00 0.00 39.88 4.18
190 191 6.313164 GGCAAACCTTATTGTAGTAGACAGTC 59.687 42.308 0.00 0.00 39.88 3.51
191 192 6.171213 GGCAAACCTTATTGTAGTAGACAGT 58.829 40.000 0.00 0.00 39.88 3.55
192 193 6.663944 GGCAAACCTTATTGTAGTAGACAG 57.336 41.667 0.00 0.00 39.88 3.51
208 209 1.810030 CGTCGGAGCTAGGCAAACC 60.810 63.158 0.00 0.00 0.00 3.27
209 210 0.802607 CTCGTCGGAGCTAGGCAAAC 60.803 60.000 0.00 0.00 32.61 2.93
210 211 1.511305 CTCGTCGGAGCTAGGCAAA 59.489 57.895 0.00 0.00 32.61 3.68
211 212 2.415608 CCTCGTCGGAGCTAGGCAA 61.416 63.158 0.00 0.00 39.06 4.52
212 213 2.829003 CCTCGTCGGAGCTAGGCA 60.829 66.667 0.00 0.00 39.06 4.75
213 214 3.597728 CCCTCGTCGGAGCTAGGC 61.598 72.222 0.00 0.00 39.06 3.93
214 215 1.894756 CTCCCTCGTCGGAGCTAGG 60.895 68.421 7.46 0.00 43.01 3.02
215 216 3.739167 CTCCCTCGTCGGAGCTAG 58.261 66.667 7.46 0.00 43.01 3.42
223 224 3.917760 CATCGGCCCTCCCTCGTC 61.918 72.222 0.00 0.00 0.00 4.20
224 225 4.458829 TCATCGGCCCTCCCTCGT 62.459 66.667 0.00 0.00 0.00 4.18
225 226 3.917760 GTCATCGGCCCTCCCTCG 61.918 72.222 0.00 0.00 0.00 4.63
226 227 2.764128 TGTCATCGGCCCTCCCTC 60.764 66.667 0.00 0.00 0.00 4.30
227 228 2.765807 CTGTCATCGGCCCTCCCT 60.766 66.667 0.00 0.00 0.00 4.20
228 229 4.554036 GCTGTCATCGGCCCTCCC 62.554 72.222 0.00 0.00 39.82 4.30
229 230 4.899239 CGCTGTCATCGGCCCTCC 62.899 72.222 0.00 0.00 42.47 4.30
230 231 4.899239 CCGCTGTCATCGGCCCTC 62.899 72.222 1.54 0.00 42.47 4.30
238 239 4.742201 AAGACGCGCCGCTGTCAT 62.742 61.111 26.60 17.30 35.68 3.06
248 249 2.430921 AAGTGAGCCGAAGACGCG 60.431 61.111 3.53 3.53 38.29 6.01
249 250 1.347817 CTGAAGTGAGCCGAAGACGC 61.348 60.000 0.00 0.00 38.29 5.19
250 251 0.039074 ACTGAAGTGAGCCGAAGACG 60.039 55.000 0.00 0.00 39.43 4.18
251 252 3.896317 ACTGAAGTGAGCCGAAGAC 57.104 52.632 0.00 0.00 0.00 3.01
262 263 2.604855 CGACGAGTACAAGCACTGAAGT 60.605 50.000 0.00 0.00 0.00 3.01
263 264 1.979469 CGACGAGTACAAGCACTGAAG 59.021 52.381 0.00 0.00 0.00 3.02
264 265 1.929038 GCGACGAGTACAAGCACTGAA 60.929 52.381 0.00 0.00 0.00 3.02
265 266 0.386858 GCGACGAGTACAAGCACTGA 60.387 55.000 0.00 0.00 0.00 3.41
266 267 0.387367 AGCGACGAGTACAAGCACTG 60.387 55.000 0.00 0.00 0.00 3.66
267 268 1.130749 CTAGCGACGAGTACAAGCACT 59.869 52.381 0.00 0.00 0.00 4.40
268 269 1.129998 TCTAGCGACGAGTACAAGCAC 59.870 52.381 0.00 0.00 0.00 4.40
269 270 1.445871 TCTAGCGACGAGTACAAGCA 58.554 50.000 0.00 0.00 0.00 3.91
270 271 2.031807 TCATCTAGCGACGAGTACAAGC 59.968 50.000 0.00 0.00 0.00 4.01
271 272 3.946308 TCATCTAGCGACGAGTACAAG 57.054 47.619 0.00 0.00 0.00 3.16
272 273 4.127907 AGATCATCTAGCGACGAGTACAA 58.872 43.478 0.00 0.00 0.00 2.41
273 274 3.729966 AGATCATCTAGCGACGAGTACA 58.270 45.455 0.00 0.00 0.00 2.90
274 275 4.201513 CGTAGATCATCTAGCGACGAGTAC 60.202 50.000 0.00 0.00 44.05 2.73
275 276 3.919197 CGTAGATCATCTAGCGACGAGTA 59.081 47.826 0.00 0.00 44.05 2.59
276 277 2.732500 CGTAGATCATCTAGCGACGAGT 59.267 50.000 0.00 0.00 44.05 4.18
277 278 2.092995 CCGTAGATCATCTAGCGACGAG 59.907 54.545 8.93 0.00 44.05 4.18
278 279 2.067013 CCGTAGATCATCTAGCGACGA 58.933 52.381 8.93 0.00 44.05 4.20
279 280 2.067013 TCCGTAGATCATCTAGCGACG 58.933 52.381 14.55 8.84 41.49 5.12
316 317 9.578439 GGTAGTACAACGAACACTAGAAATAAT 57.422 33.333 2.06 0.00 0.00 1.28
317 318 8.575589 TGGTAGTACAACGAACACTAGAAATAA 58.424 33.333 2.06 0.00 0.00 1.40
318 319 8.109705 TGGTAGTACAACGAACACTAGAAATA 57.890 34.615 2.06 0.00 0.00 1.40
319 320 6.985117 TGGTAGTACAACGAACACTAGAAAT 58.015 36.000 2.06 0.00 0.00 2.17
320 321 6.389830 TGGTAGTACAACGAACACTAGAAA 57.610 37.500 2.06 0.00 0.00 2.52
321 322 6.579666 ATGGTAGTACAACGAACACTAGAA 57.420 37.500 2.06 0.00 0.00 2.10
322 323 6.579666 AATGGTAGTACAACGAACACTAGA 57.420 37.500 2.06 0.00 0.00 2.43
323 324 8.804743 CAATAATGGTAGTACAACGAACACTAG 58.195 37.037 2.06 0.00 0.00 2.57
324 325 8.522003 TCAATAATGGTAGTACAACGAACACTA 58.478 33.333 2.06 0.00 0.00 2.74
325 326 7.380536 TCAATAATGGTAGTACAACGAACACT 58.619 34.615 2.06 0.00 0.00 3.55
326 327 7.585286 TCAATAATGGTAGTACAACGAACAC 57.415 36.000 2.06 0.00 0.00 3.32
327 328 8.089597 TCTTCAATAATGGTAGTACAACGAACA 58.910 33.333 2.06 0.00 0.00 3.18
328 329 8.470040 TCTTCAATAATGGTAGTACAACGAAC 57.530 34.615 2.06 0.00 0.00 3.95
329 330 9.093970 CATCTTCAATAATGGTAGTACAACGAA 57.906 33.333 2.06 0.00 0.00 3.85
330 331 8.471609 TCATCTTCAATAATGGTAGTACAACGA 58.528 33.333 2.06 0.00 0.00 3.85
331 332 8.642908 TCATCTTCAATAATGGTAGTACAACG 57.357 34.615 2.06 0.00 0.00 4.10
380 381 8.482128 TGTGAAATCACTTGGTTATTCCTTTTT 58.518 29.630 14.15 0.00 46.55 1.94
381 382 8.017418 TGTGAAATCACTTGGTTATTCCTTTT 57.983 30.769 14.15 0.00 46.55 2.27
382 383 7.595819 TGTGAAATCACTTGGTTATTCCTTT 57.404 32.000 14.15 0.00 46.55 3.11
383 384 7.595819 TTGTGAAATCACTTGGTTATTCCTT 57.404 32.000 14.15 0.00 46.55 3.36
384 385 7.595819 TTTGTGAAATCACTTGGTTATTCCT 57.404 32.000 14.15 0.00 46.55 3.36
385 386 8.831715 AATTTGTGAAATCACTTGGTTATTCC 57.168 30.769 14.15 0.00 46.55 3.01
419 420 8.623030 CCATGAAATTTGTGAAATCACCTTTTT 58.377 29.630 10.83 7.51 45.88 1.94
420 421 7.774625 ACCATGAAATTTGTGAAATCACCTTTT 59.225 29.630 10.83 7.81 45.88 2.27
421 422 7.281841 ACCATGAAATTTGTGAAATCACCTTT 58.718 30.769 10.83 7.97 45.88 3.11
422 423 6.829849 ACCATGAAATTTGTGAAATCACCTT 58.170 32.000 10.83 0.22 45.88 3.50
423 424 6.423776 ACCATGAAATTTGTGAAATCACCT 57.576 33.333 10.83 0.00 45.88 4.00
424 425 7.278424 CCATACCATGAAATTTGTGAAATCACC 59.722 37.037 10.83 0.00 45.88 4.02
425 426 7.201548 GCCATACCATGAAATTTGTGAAATCAC 60.202 37.037 6.60 6.60 46.59 3.06
426 427 6.817641 GCCATACCATGAAATTTGTGAAATCA 59.182 34.615 0.00 0.00 0.00 2.57
427 428 7.043565 AGCCATACCATGAAATTTGTGAAATC 58.956 34.615 0.00 0.00 0.00 2.17
428 429 6.949715 AGCCATACCATGAAATTTGTGAAAT 58.050 32.000 0.00 0.00 0.00 2.17
429 430 6.357579 AGCCATACCATGAAATTTGTGAAA 57.642 33.333 0.00 0.00 0.00 2.69
430 431 5.392919 CGAGCCATACCATGAAATTTGTGAA 60.393 40.000 0.00 0.00 0.00 3.18
431 432 4.096231 CGAGCCATACCATGAAATTTGTGA 59.904 41.667 0.00 0.00 0.00 3.58
432 433 4.096231 TCGAGCCATACCATGAAATTTGTG 59.904 41.667 0.00 0.00 0.00 3.33
433 434 4.269183 TCGAGCCATACCATGAAATTTGT 58.731 39.130 0.00 0.00 0.00 2.83
434 435 4.898829 TCGAGCCATACCATGAAATTTG 57.101 40.909 0.00 0.00 0.00 2.32
435 436 5.132502 TCATCGAGCCATACCATGAAATTT 58.867 37.500 0.00 0.00 0.00 1.82
436 437 4.717877 TCATCGAGCCATACCATGAAATT 58.282 39.130 0.00 0.00 0.00 1.82
437 438 4.356405 TCATCGAGCCATACCATGAAAT 57.644 40.909 0.00 0.00 0.00 2.17
438 439 3.836365 TCATCGAGCCATACCATGAAA 57.164 42.857 0.00 0.00 0.00 2.69
439 440 3.732212 CTTCATCGAGCCATACCATGAA 58.268 45.455 0.00 0.00 33.48 2.57
440 441 2.548707 GCTTCATCGAGCCATACCATGA 60.549 50.000 0.00 0.00 36.66 3.07
441 442 1.802960 GCTTCATCGAGCCATACCATG 59.197 52.381 0.00 0.00 36.66 3.66
442 443 1.417517 TGCTTCATCGAGCCATACCAT 59.582 47.619 0.00 0.00 42.01 3.55
443 444 0.829990 TGCTTCATCGAGCCATACCA 59.170 50.000 0.00 0.00 42.01 3.25
444 445 2.175878 ATGCTTCATCGAGCCATACC 57.824 50.000 0.00 0.00 42.01 2.73
445 446 3.677121 CAGTATGCTTCATCGAGCCATAC 59.323 47.826 12.13 12.13 42.01 2.39
446 447 3.573967 TCAGTATGCTTCATCGAGCCATA 59.426 43.478 0.00 0.00 42.01 2.74
447 448 2.366590 TCAGTATGCTTCATCGAGCCAT 59.633 45.455 0.00 0.00 42.01 4.40
448 449 1.756538 TCAGTATGCTTCATCGAGCCA 59.243 47.619 0.00 0.00 42.01 4.75
449 450 2.035193 TCTCAGTATGCTTCATCGAGCC 59.965 50.000 0.00 0.00 42.01 4.70
450 451 3.243367 ACTCTCAGTATGCTTCATCGAGC 60.243 47.826 0.00 0.00 43.00 5.03
451 452 4.566545 ACTCTCAGTATGCTTCATCGAG 57.433 45.455 0.00 0.00 34.76 4.04
452 453 7.929941 ATATACTCTCAGTATGCTTCATCGA 57.070 36.000 6.46 0.00 41.23 3.59
453 454 7.700234 GGAATATACTCTCAGTATGCTTCATCG 59.300 40.741 15.51 0.00 41.23 3.84
454 455 8.748412 AGGAATATACTCTCAGTATGCTTCATC 58.252 37.037 15.51 6.30 41.23 2.92
455 456 8.663209 AGGAATATACTCTCAGTATGCTTCAT 57.337 34.615 15.51 10.09 41.23 2.57
456 457 8.363390 CAAGGAATATACTCTCAGTATGCTTCA 58.637 37.037 15.51 0.00 41.23 3.02
457 458 8.580720 TCAAGGAATATACTCTCAGTATGCTTC 58.419 37.037 6.46 8.53 41.23 3.86
458 459 8.484214 TCAAGGAATATACTCTCAGTATGCTT 57.516 34.615 6.46 1.16 41.23 3.91
459 460 7.947332 TCTCAAGGAATATACTCTCAGTATGCT 59.053 37.037 6.46 0.00 41.23 3.79
460 461 8.116651 TCTCAAGGAATATACTCTCAGTATGC 57.883 38.462 6.46 0.00 41.23 3.14
463 464 9.868160 TCATTCTCAAGGAATATACTCTCAGTA 57.132 33.333 0.00 0.00 42.20 2.74
464 465 8.637986 GTCATTCTCAAGGAATATACTCTCAGT 58.362 37.037 0.00 0.00 42.20 3.41
465 466 8.859090 AGTCATTCTCAAGGAATATACTCTCAG 58.141 37.037 0.00 0.00 42.20 3.35
466 467 8.774546 AGTCATTCTCAAGGAATATACTCTCA 57.225 34.615 0.00 0.00 42.20 3.27
474 475 9.958180 TCACAATTTAGTCATTCTCAAGGAATA 57.042 29.630 0.00 0.00 42.20 1.75
475 476 8.868522 TCACAATTTAGTCATTCTCAAGGAAT 57.131 30.769 0.00 0.00 44.66 3.01
476 477 8.868522 ATCACAATTTAGTCATTCTCAAGGAA 57.131 30.769 0.00 0.00 38.41 3.36
477 478 8.868522 AATCACAATTTAGTCATTCTCAAGGA 57.131 30.769 0.00 0.00 0.00 3.36
478 479 8.186821 GGAATCACAATTTAGTCATTCTCAAGG 58.813 37.037 0.00 0.00 0.00 3.61
479 480 8.733458 TGGAATCACAATTTAGTCATTCTCAAG 58.267 33.333 0.00 0.00 0.00 3.02
480 481 8.634335 TGGAATCACAATTTAGTCATTCTCAA 57.366 30.769 0.00 0.00 0.00 3.02
481 482 8.812513 ATGGAATCACAATTTAGTCATTCTCA 57.187 30.769 0.00 0.00 0.00 3.27
483 484 9.125026 GGTATGGAATCACAATTTAGTCATTCT 57.875 33.333 0.00 0.00 0.00 2.40
484 485 8.902806 TGGTATGGAATCACAATTTAGTCATTC 58.097 33.333 0.00 0.00 0.00 2.67
485 486 8.821686 TGGTATGGAATCACAATTTAGTCATT 57.178 30.769 0.00 0.00 0.00 2.57
486 487 8.686334 GTTGGTATGGAATCACAATTTAGTCAT 58.314 33.333 0.00 0.00 0.00 3.06
487 488 7.122055 GGTTGGTATGGAATCACAATTTAGTCA 59.878 37.037 0.00 0.00 0.00 3.41
488 489 7.122055 TGGTTGGTATGGAATCACAATTTAGTC 59.878 37.037 0.00 0.00 0.00 2.59
489 490 6.951198 TGGTTGGTATGGAATCACAATTTAGT 59.049 34.615 0.00 0.00 0.00 2.24
490 491 7.403312 TGGTTGGTATGGAATCACAATTTAG 57.597 36.000 0.00 0.00 0.00 1.85
491 492 7.782897 TTGGTTGGTATGGAATCACAATTTA 57.217 32.000 0.00 0.00 0.00 1.40
492 493 6.678568 TTGGTTGGTATGGAATCACAATTT 57.321 33.333 0.00 0.00 0.00 1.82
493 494 6.042552 TGTTTGGTTGGTATGGAATCACAATT 59.957 34.615 0.00 0.00 0.00 2.32
494 495 5.541868 TGTTTGGTTGGTATGGAATCACAAT 59.458 36.000 0.00 0.00 0.00 2.71
495 496 4.895889 TGTTTGGTTGGTATGGAATCACAA 59.104 37.500 0.00 0.00 0.00 3.33
496 497 4.474394 TGTTTGGTTGGTATGGAATCACA 58.526 39.130 0.00 0.00 0.00 3.58
497 498 5.461032 TTGTTTGGTTGGTATGGAATCAC 57.539 39.130 0.00 0.00 0.00 3.06
498 499 5.046735 CCATTGTTTGGTTGGTATGGAATCA 60.047 40.000 0.00 0.00 40.99 2.57
499 500 5.186797 TCCATTGTTTGGTTGGTATGGAATC 59.813 40.000 0.00 0.00 46.52 2.52
500 501 5.090139 TCCATTGTTTGGTTGGTATGGAAT 58.910 37.500 0.00 0.00 46.52 3.01
501 502 4.483950 TCCATTGTTTGGTTGGTATGGAA 58.516 39.130 0.00 0.00 46.52 3.53
502 503 4.119556 TCCATTGTTTGGTTGGTATGGA 57.880 40.909 0.00 0.00 46.52 3.41
503 504 4.881019 TTCCATTGTTTGGTTGGTATGG 57.119 40.909 0.00 0.00 46.52 2.74
504 505 6.035368 TCATTCCATTGTTTGGTTGGTATG 57.965 37.500 0.00 0.00 46.52 2.39
505 506 6.678568 TTCATTCCATTGTTTGGTTGGTAT 57.321 33.333 0.00 0.00 46.52 2.73
506 507 6.485830 TTTCATTCCATTGTTTGGTTGGTA 57.514 33.333 0.00 0.00 46.52 3.25
507 508 5.365021 TTTCATTCCATTGTTTGGTTGGT 57.635 34.783 0.00 0.00 46.52 3.67
508 509 5.335035 GCATTTCATTCCATTGTTTGGTTGG 60.335 40.000 0.00 0.00 46.52 3.77
509 510 5.470777 AGCATTTCATTCCATTGTTTGGTTG 59.529 36.000 0.00 0.00 46.52 3.77
510 511 5.623169 AGCATTTCATTCCATTGTTTGGTT 58.377 33.333 0.00 0.00 46.52 3.67
511 512 5.231702 AGCATTTCATTCCATTGTTTGGT 57.768 34.783 0.00 0.00 46.52 3.67
513 514 5.870433 TGCTAGCATTTCATTCCATTGTTTG 59.130 36.000 14.93 0.00 0.00 2.93
514 515 6.040209 TGCTAGCATTTCATTCCATTGTTT 57.960 33.333 14.93 0.00 0.00 2.83
515 516 5.664294 TGCTAGCATTTCATTCCATTGTT 57.336 34.783 14.93 0.00 0.00 2.83
516 517 5.664294 TTGCTAGCATTTCATTCCATTGT 57.336 34.783 20.13 0.00 0.00 2.71
517 518 6.277605 TCATTGCTAGCATTTCATTCCATTG 58.722 36.000 20.13 0.00 0.00 2.82
518 519 6.474140 TCATTGCTAGCATTTCATTCCATT 57.526 33.333 20.13 0.00 0.00 3.16
519 520 6.474140 TTCATTGCTAGCATTTCATTCCAT 57.526 33.333 20.13 2.25 0.00 3.41
520 521 5.918426 TTCATTGCTAGCATTTCATTCCA 57.082 34.783 20.13 0.00 0.00 3.53
521 522 5.521372 GGTTTCATTGCTAGCATTTCATTCC 59.479 40.000 20.13 12.07 0.00 3.01
522 523 6.101332 TGGTTTCATTGCTAGCATTTCATTC 58.899 36.000 20.13 7.58 0.00 2.67
523 524 6.040209 TGGTTTCATTGCTAGCATTTCATT 57.960 33.333 20.13 0.00 0.00 2.57
524 525 5.664294 TGGTTTCATTGCTAGCATTTCAT 57.336 34.783 20.13 5.97 0.00 2.57
525 526 5.229423 GTTGGTTTCATTGCTAGCATTTCA 58.771 37.500 20.13 3.28 0.00 2.69
526 527 4.627035 GGTTGGTTTCATTGCTAGCATTTC 59.373 41.667 20.13 6.31 0.00 2.17
527 528 4.563374 GGGTTGGTTTCATTGCTAGCATTT 60.563 41.667 20.13 6.55 0.00 2.32
528 529 3.055891 GGGTTGGTTTCATTGCTAGCATT 60.056 43.478 20.13 12.71 0.00 3.56
529 530 2.497273 GGGTTGGTTTCATTGCTAGCAT 59.503 45.455 20.13 6.03 0.00 3.79
530 531 1.892474 GGGTTGGTTTCATTGCTAGCA 59.108 47.619 14.93 14.93 0.00 3.49
531 532 1.135402 CGGGTTGGTTTCATTGCTAGC 60.135 52.381 8.10 8.10 0.00 3.42
532 533 2.159382 ACGGGTTGGTTTCATTGCTAG 58.841 47.619 0.00 0.00 0.00 3.42
544 545 1.741770 GCAGCACTAGACGGGTTGG 60.742 63.158 0.00 0.00 0.00 3.77
550 551 4.006989 AGAGGATATAGCAGCACTAGACG 58.993 47.826 0.00 0.00 33.29 4.18
560 561 5.903010 TGGGTCTTTGTTAGAGGATATAGCA 59.097 40.000 0.00 0.00 32.23 3.49
562 563 6.239629 GGGTGGGTCTTTGTTAGAGGATATAG 60.240 46.154 0.00 0.00 32.23 1.31
563 564 5.605488 GGGTGGGTCTTTGTTAGAGGATATA 59.395 44.000 0.00 0.00 32.23 0.86
564 565 4.412528 GGGTGGGTCTTTGTTAGAGGATAT 59.587 45.833 0.00 0.00 32.23 1.63
565 566 3.778629 GGGTGGGTCTTTGTTAGAGGATA 59.221 47.826 0.00 0.00 32.23 2.59
566 567 2.576648 GGGTGGGTCTTTGTTAGAGGAT 59.423 50.000 0.00 0.00 32.23 3.24
567 568 1.982958 GGGTGGGTCTTTGTTAGAGGA 59.017 52.381 0.00 0.00 32.23 3.71
579 580 1.207329 CTGTGCTACTTAGGGTGGGTC 59.793 57.143 0.00 0.00 0.00 4.46
644 647 8.933653 TGTTGAACTAGATGAATGGTATGGATA 58.066 33.333 0.00 0.00 0.00 2.59
666 669 6.063640 TGTGAGATCTGTGTTTTCATGTTG 57.936 37.500 0.00 0.00 0.00 3.33
740 743 0.603975 AGCTCCTCTTGCCACGAAAC 60.604 55.000 0.00 0.00 0.00 2.78
779 791 2.639327 CCTTGGCCCGCTTTTCCTG 61.639 63.158 0.00 0.00 0.00 3.86
860 877 2.289072 GCTGCCCTTCCTTTTCCTTTTC 60.289 50.000 0.00 0.00 0.00 2.29
1048 1072 2.595754 GGGATTGGATGCCGGAGC 60.596 66.667 5.05 0.00 40.48 4.70
1087 1137 0.178990 GAATGGGGGTGTATCTGGGC 60.179 60.000 0.00 0.00 0.00 5.36
1088 1138 0.108585 CGAATGGGGGTGTATCTGGG 59.891 60.000 0.00 0.00 0.00 4.45
1089 1139 0.535102 GCGAATGGGGGTGTATCTGG 60.535 60.000 0.00 0.00 0.00 3.86
1090 1140 0.180171 TGCGAATGGGGGTGTATCTG 59.820 55.000 0.00 0.00 0.00 2.90
1091 1141 0.469917 CTGCGAATGGGGGTGTATCT 59.530 55.000 0.00 0.00 0.00 1.98
1092 1142 1.166531 GCTGCGAATGGGGGTGTATC 61.167 60.000 0.00 0.00 0.00 2.24
1093 1143 1.152963 GCTGCGAATGGGGGTGTAT 60.153 57.895 0.00 0.00 0.00 2.29
1094 1144 2.270850 GCTGCGAATGGGGGTGTA 59.729 61.111 0.00 0.00 0.00 2.90
1175 1226 2.581953 GAGCTCGCTCGCCTTCTG 60.582 66.667 0.00 0.00 33.06 3.02
1186 1241 4.139420 CGTTGCAAGCCGAGCTCG 62.139 66.667 29.06 29.06 38.25 5.03
1215 1270 1.632422 GGATTGATTTGCTTGGCGTG 58.368 50.000 0.00 0.00 0.00 5.34
1225 1280 2.123897 CGGGCCGGGGATTGATTT 60.124 61.111 20.56 0.00 0.00 2.17
1289 1344 1.020437 GCCAGGTGAAATAGCAGAGC 58.980 55.000 0.00 0.00 0.00 4.09
1354 1409 5.858581 GCCAAGCACAACAACTAATCTAAAG 59.141 40.000 0.00 0.00 0.00 1.85
1356 1411 4.083537 CGCCAAGCACAACAACTAATCTAA 60.084 41.667 0.00 0.00 0.00 2.10
1479 1537 3.175133 AATGGTCCATTGACTCGGC 57.825 52.632 16.63 0.00 41.47 5.54
1536 1599 3.708403 TGATTCACTCCATTGTCAGCT 57.292 42.857 0.00 0.00 0.00 4.24
1571 1634 3.198635 AGAGCTAAAGTGATGGCAGCTTA 59.801 43.478 3.69 0.00 42.44 3.09
1575 1638 3.871485 AGAAGAGCTAAAGTGATGGCAG 58.129 45.455 0.00 0.00 0.00 4.85
1584 1647 4.999950 TCAGCAAGGAAAGAAGAGCTAAAG 59.000 41.667 0.00 0.00 0.00 1.85
1630 1693 1.465689 GGATTTCGACATTGCACGGTG 60.466 52.381 3.15 3.15 0.00 4.94
1634 1697 2.096496 CAGAGGGATTTCGACATTGCAC 59.904 50.000 0.00 0.00 0.00 4.57
1635 1698 2.290260 ACAGAGGGATTTCGACATTGCA 60.290 45.455 0.00 0.00 0.00 4.08
1644 1707 6.674760 GCGTTTACAATGTACAGAGGGATTTC 60.675 42.308 0.33 0.00 0.00 2.17
1648 1711 3.592059 GCGTTTACAATGTACAGAGGGA 58.408 45.455 0.33 0.00 0.00 4.20
1662 1725 3.867493 GGTAGTTCATACAGGGCGTTTAC 59.133 47.826 0.00 0.00 35.96 2.01
1667 1730 1.480954 AGTGGTAGTTCATACAGGGCG 59.519 52.381 0.00 0.00 35.96 6.13
1699 1762 7.018487 ACCCGAGTATGAGTACAGTATATCT 57.982 40.000 0.00 0.00 33.09 1.98
1720 1809 4.906618 TGACTGTCCTGAAGAAAATACCC 58.093 43.478 5.17 0.00 0.00 3.69
1736 1825 1.227556 GCGTGGTCAACCTGACTGT 60.228 57.895 6.74 0.00 46.19 3.55
1769 1858 2.035576 GCATGCCATCTCTGAAAATCCC 59.964 50.000 6.36 0.00 0.00 3.85
1770 1859 2.035576 GGCATGCCATCTCTGAAAATCC 59.964 50.000 32.08 0.00 35.81 3.01
1812 1901 6.565623 GCAAAACAGAGCAGTAGAAGAAGAAG 60.566 42.308 0.00 0.00 0.00 2.85
1813 1902 5.237344 GCAAAACAGAGCAGTAGAAGAAGAA 59.763 40.000 0.00 0.00 0.00 2.52
1814 1903 4.752101 GCAAAACAGAGCAGTAGAAGAAGA 59.248 41.667 0.00 0.00 0.00 2.87
1843 1932 1.676678 GGCGTACTCTGCATCTCCCA 61.677 60.000 0.00 0.00 0.00 4.37
1860 1949 2.280628 CTTCGGATCCTTGTACTTGGC 58.719 52.381 10.75 0.00 0.00 4.52
1861 1950 2.280628 GCTTCGGATCCTTGTACTTGG 58.719 52.381 10.75 0.00 0.00 3.61
1862 1951 2.932614 CTGCTTCGGATCCTTGTACTTG 59.067 50.000 10.75 0.00 0.00 3.16
1877 1966 0.819259 TGGTGTTGACAGGCTGCTTC 60.819 55.000 15.89 6.27 0.00 3.86
1952 2041 1.148310 CAACCGAACGCTCAATCTGT 58.852 50.000 0.00 0.00 0.00 3.41
2016 2105 5.138883 ACTGCAAGAAGCTAGGAGCTGTT 62.139 47.826 0.89 0.00 45.32 3.16
2032 2121 2.857483 TGCACTAAGCCTTTACTGCAA 58.143 42.857 2.03 0.00 44.83 4.08
2052 2141 5.120830 GTGTGAGCTATCGAACAACATTCTT 59.879 40.000 0.00 0.00 0.00 2.52
2055 2144 4.314961 TGTGTGAGCTATCGAACAACATT 58.685 39.130 0.00 0.00 0.00 2.71
2066 2155 2.680312 AGCGAACATGTGTGAGCTAT 57.320 45.000 13.56 0.00 38.94 2.97
2082 2171 1.080230 CTCCGGATGCAGGATAGCG 60.080 63.158 3.57 0.00 37.13 4.26
2104 2193 0.740149 TGCTGTCAACCTGCAAACAG 59.260 50.000 7.92 7.92 43.98 3.16
2111 2206 1.392589 AGGTTTGTGCTGTCAACCTG 58.607 50.000 1.97 0.00 32.25 4.00
2128 2223 5.003804 ACTCTAGCAATGTGGTGTTAAAGG 58.996 41.667 0.00 0.00 0.00 3.11
2317 2412 7.959658 TCTGGAATTCATTTACCATGTTGAT 57.040 32.000 7.93 0.00 0.00 2.57
2491 2586 2.252747 CACAGCCATGCGTTTACATTG 58.747 47.619 0.00 0.00 0.00 2.82
2532 2627 4.809815 ATTTTCAACAAAACGGCCATTG 57.190 36.364 2.24 7.49 34.24 2.82
2627 2722 5.030295 CAGAATTTATGTTGCTACTTGCCG 58.970 41.667 0.00 0.00 42.00 5.69
2682 2777 6.098409 CCGTTCCAAGATATAGCTACCCATAT 59.902 42.308 0.00 0.00 0.00 1.78
2850 2945 5.796350 ATAAAGCAAGACAACACCGTATC 57.204 39.130 0.00 0.00 0.00 2.24
2913 3008 9.912634 CAATCAACATAACTTTTAGTGAACCAT 57.087 29.630 0.00 0.00 0.00 3.55
3119 3216 7.712204 TCTACCATACACATTAACACTGAGA 57.288 36.000 0.00 0.00 0.00 3.27
3134 3231 6.159988 GGCTCACATCTTACATCTACCATAC 58.840 44.000 0.00 0.00 0.00 2.39
3145 3242 5.053145 CCTACAGATTGGCTCACATCTTAC 58.947 45.833 0.00 0.00 0.00 2.34
3194 3291 5.334414 GCAGATTACCTGTCAGTTCAAAGTG 60.334 44.000 0.00 0.00 44.71 3.16
3236 3333 6.867816 TGCTTGCCATAAAAAGTTGATTACTG 59.132 34.615 0.00 0.00 37.12 2.74
3454 3552 2.921121 GTGCTCGTCAATGATCGTGTTA 59.079 45.455 0.00 0.00 0.00 2.41
3583 3681 1.198713 AGCCAGTGACTAGGTCATGG 58.801 55.000 16.90 16.90 44.63 3.66
3589 3687 4.537135 TTTCAAGTAGCCAGTGACTAGG 57.463 45.455 0.00 0.00 0.00 3.02
3660 3758 3.067601 TCAGTTTACGACAACAGCAGAGA 59.932 43.478 0.00 0.00 0.00 3.10
3687 3785 1.399440 CCTGCAATCAGTCACCATTCG 59.601 52.381 0.00 0.00 38.66 3.34
3784 3882 2.710096 TACCAGCATTTACTCCAGCC 57.290 50.000 0.00 0.00 0.00 4.85
3791 3889 9.231297 ACATACCATATCAATACCAGCATTTAC 57.769 33.333 0.00 0.00 0.00 2.01
3892 3999 8.702163 AACCAGATACTTTTTGAACAACAAAG 57.298 30.769 14.29 14.29 46.93 2.77
4009 4116 3.433306 TTAGGTGATCTTGGGTTGTGG 57.567 47.619 0.00 0.00 0.00 4.17
4134 4241 9.288576 TGTTGCTCAGTAAGTACTAAGTACTAA 57.711 33.333 5.59 0.00 46.96 2.24
4135 4242 8.853077 TGTTGCTCAGTAAGTACTAAGTACTA 57.147 34.615 5.59 0.00 46.96 1.82
4137 4244 7.060403 CGTTGTTGCTCAGTAAGTACTAAGTAC 59.940 40.741 0.00 0.00 39.10 2.73
4138 4245 7.041167 TCGTTGTTGCTCAGTAAGTACTAAGTA 60.041 37.037 0.00 0.00 34.13 2.24
4139 4246 5.919141 CGTTGTTGCTCAGTAAGTACTAAGT 59.081 40.000 0.00 0.00 34.13 2.24
4140 4247 6.087820 GTCGTTGTTGCTCAGTAAGTACTAAG 59.912 42.308 0.00 0.00 34.13 2.18
4148 4255 3.067601 TCAGAGTCGTTGTTGCTCAGTAA 59.932 43.478 0.00 0.00 0.00 2.24
4158 4265 7.416154 TTCGATTAAAAATCAGAGTCGTTGT 57.584 32.000 0.00 0.00 0.00 3.32
4656 4764 1.135960 TTGACCATCCACCACACTGA 58.864 50.000 0.00 0.00 0.00 3.41
4701 4809 2.010145 AGCACGTACCAGCTGTAATG 57.990 50.000 13.81 8.02 40.13 1.90
4720 4828 7.003402 AGCAACCAAAGGCATATTAGAAAAA 57.997 32.000 0.00 0.00 0.00 1.94
4721 4829 6.437162 AGAGCAACCAAAGGCATATTAGAAAA 59.563 34.615 0.00 0.00 0.00 2.29
4774 4882 7.229306 TGGCAGGCAGTAATCTAAAATATTGAG 59.771 37.037 0.00 0.00 0.00 3.02
4941 5049 3.620488 GGTGGACTTTATGGCATCAAGA 58.380 45.455 24.20 3.26 0.00 3.02
5146 5254 2.584791 GACAACCACTGCGCATTTAAG 58.415 47.619 12.24 0.00 0.00 1.85
5169 5277 1.870055 TAACGACAGGCCGTCCAGAC 61.870 60.000 18.07 0.00 42.54 3.51
5250 5358 0.882042 GCACATCAGCGATACCCTGG 60.882 60.000 0.00 0.00 0.00 4.45
5257 5365 2.224606 CCCAAATAGCACATCAGCGAT 58.775 47.619 0.00 0.00 40.15 4.58
5310 5418 3.407424 TGATCCACAGACTTGAACCAG 57.593 47.619 0.00 0.00 0.00 4.00
5325 5433 1.700955 AATTCATGGGCAGCTGATCC 58.299 50.000 20.43 18.15 0.00 3.36
5328 5436 1.551430 CCAAAATTCATGGGCAGCTGA 59.449 47.619 20.43 0.00 34.15 4.26
5379 5487 0.892063 TTATTGCCAAACCGAAGCCC 59.108 50.000 0.00 0.00 0.00 5.19
5395 5503 4.255510 ACCCTGGCTGTGATGAATTTAT 57.744 40.909 0.00 0.00 0.00 1.40
5476 5584 9.442047 AACAAGACGAAAGATATCAGATTTCTT 57.558 29.630 9.65 9.65 32.96 2.52
5477 5585 9.442047 AAACAAGACGAAAGATATCAGATTTCT 57.558 29.630 5.32 0.00 32.08 2.52
5524 5632 1.327690 TTATCTCCGCGGCTTCTGGT 61.328 55.000 23.51 6.60 0.00 4.00
5593 5701 5.163099 TGAAATACACCTATGCCCAAGCTAT 60.163 40.000 0.00 0.00 40.80 2.97
5618 5726 4.393062 TGCTACAAAAGAGCAGATTAGTGC 59.607 41.667 0.00 0.00 44.89 4.40
5687 5795 2.620251 TCTGCAGGGAACAATATCCG 57.380 50.000 15.13 0.00 40.62 4.18
5729 5837 3.663995 TCAACAAATCTACCGACCGAA 57.336 42.857 0.00 0.00 0.00 4.30
5789 6077 6.287589 ACTTTGTCCTCACCACTAGATTAG 57.712 41.667 0.00 0.00 0.00 1.73
5800 6088 9.654663 AAAATCATACTACTACTTTGTCCTCAC 57.345 33.333 0.00 0.00 0.00 3.51
5820 6111 6.265196 ACAGGACTTGCATGTTCTTAAAATCA 59.735 34.615 10.78 0.00 38.59 2.57
5866 6157 7.827819 ATGATTCAATTTGAAGCTGAATGTG 57.172 32.000 23.42 0.00 42.72 3.21
5982 6275 2.932614 ACAGTTATGACAGATTCAGCGC 59.067 45.455 0.00 0.00 37.77 5.92
6004 6297 2.368875 CCATGGTATTCTCTACGGCCTT 59.631 50.000 2.57 0.00 0.00 4.35
6517 6823 6.494842 TGCTTGCTATTGATATTTTCGGTTC 58.505 36.000 0.00 0.00 0.00 3.62
6529 6835 2.795231 AAGGCTCTGCTTGCTATTGA 57.205 45.000 0.00 0.00 0.00 2.57
6532 6838 3.362870 AAGAAAGGCTCTGCTTGCTAT 57.637 42.857 0.00 0.00 33.37 2.97
6533 6839 2.816087 CAAAGAAAGGCTCTGCTTGCTA 59.184 45.455 0.00 0.00 33.37 3.49
6539 6845 0.110010 GCGACAAAGAAAGGCTCTGC 60.110 55.000 0.00 0.00 33.37 4.26
6540 6846 1.196354 CAGCGACAAAGAAAGGCTCTG 59.804 52.381 0.00 0.00 33.37 3.35
6671 6992 2.632996 TCAGGTCAACCAAGATCGAAGT 59.367 45.455 1.33 0.00 38.89 3.01
6687 7008 7.069578 TCGTATAGGCTAGAAAAAGATTCAGGT 59.930 37.037 0.00 0.00 0.00 4.00
6705 7027 3.069586 TGTTGGGCTCTCAATCGTATAGG 59.930 47.826 0.00 0.00 0.00 2.57
6727 7049 3.515630 CCGATATATTCGTGATGCAGCT 58.484 45.455 2.53 0.00 46.65 4.24
6728 7050 2.029728 GCCGATATATTCGTGATGCAGC 59.970 50.000 0.00 0.00 46.65 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.