Multiple sequence alignment - TraesCS3D01G306900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G306900 chr3D 100.000 4179 0 0 1 4179 420483443 420487621 0.000000e+00 7718
1 TraesCS3D01G306900 chr3A 92.451 2411 104 25 1030 3394 530437386 530435008 0.000000e+00 3373
2 TraesCS3D01G306900 chr3A 91.517 778 38 17 3421 4179 530435018 530434250 0.000000e+00 1046
3 TraesCS3D01G306900 chr3A 94.194 465 25 2 513 976 704647532 704647069 0.000000e+00 708
4 TraesCS3D01G306900 chr3A 88.346 266 19 6 15 272 530472973 530472712 4.060000e-80 309
5 TraesCS3D01G306900 chr3B 89.610 1001 78 12 1948 2932 547448970 547449960 0.000000e+00 1249
6 TraesCS3D01G306900 chr3B 89.211 1001 67 24 3195 4179 547450137 547451112 0.000000e+00 1212
7 TraesCS3D01G306900 chr3B 88.235 408 35 7 1502 1905 547448573 547448971 3.780000e-130 475
8 TraesCS3D01G306900 chr3B 88.439 173 13 5 1 170 547346719 547346887 7.080000e-48 202
9 TraesCS3D01G306900 chr3B 85.500 200 12 7 2965 3159 547449963 547450150 4.260000e-45 193
10 TraesCS3D01G306900 chr1D 94.624 465 20 5 513 976 376863720 376863260 0.000000e+00 715
11 TraesCS3D01G306900 chr1A 93.590 468 28 2 513 978 30638461 30638928 0.000000e+00 697
12 TraesCS3D01G306900 chr1A 91.824 477 33 6 504 976 472948397 472948871 0.000000e+00 660
13 TraesCS3D01G306900 chr1A 82.540 189 24 5 265 449 185529035 185528852 1.560000e-34 158
14 TraesCS3D01G306900 chr1A 82.011 189 26 5 265 449 158522235 158522419 2.010000e-33 154
15 TraesCS3D01G306900 chr5D 93.191 470 27 3 514 978 430534269 430533800 0.000000e+00 686
16 TraesCS3D01G306900 chr1B 92.979 470 26 5 514 977 547281107 547280639 0.000000e+00 678
17 TraesCS3D01G306900 chr1B 92.888 464 31 2 514 976 108867098 108867560 0.000000e+00 673
18 TraesCS3D01G306900 chr5B 92.918 466 29 3 514 977 61558515 61558978 0.000000e+00 675
19 TraesCS3D01G306900 chr6A 92.719 467 28 6 513 976 580322223 580321760 0.000000e+00 669
20 TraesCS3D01G306900 chr6D 91.667 180 12 2 265 443 159860570 159860747 3.230000e-61 246


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G306900 chr3D 420483443 420487621 4178 False 7718.00 7718 100.000 1 4179 1 chr3D.!!$F1 4178
1 TraesCS3D01G306900 chr3A 530434250 530437386 3136 True 2209.50 3373 91.984 1030 4179 2 chr3A.!!$R3 3149
2 TraesCS3D01G306900 chr3B 547448573 547451112 2539 False 782.25 1249 88.139 1502 4179 4 chr3B.!!$F2 2677

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
606 607 0.025770 CGCCGTGGCACGTTTAATAG 59.974 55.000 34.74 20.30 40.58 1.73 F
717 718 0.031857 CGTTGGGCTGCATGTTTTCA 59.968 50.000 0.50 0.00 0.00 2.69 F
815 816 0.038067 AAAAATAAACCGGCCGTGCC 60.038 50.000 26.12 4.96 46.75 5.01 F
1000 1001 0.171903 GGCCGACGAGTAAAGCTGTA 59.828 55.000 0.00 0.00 0.00 2.74 F
1025 1026 0.385598 TCTTGCGAGAGACGAACACG 60.386 55.000 0.00 0.00 45.77 4.49 F
1026 1027 0.385598 CTTGCGAGAGACGAACACGA 60.386 55.000 0.00 0.00 45.77 4.35 F
1027 1028 0.659417 TTGCGAGAGACGAACACGAC 60.659 55.000 0.00 0.00 45.77 4.34 F
1071 1072 1.019805 GTAGGCTTCCGTGTCAAGGC 61.020 60.000 0.00 0.00 44.76 4.35 F
1446 1464 1.077930 GGTAAAAGTCCCGGCTCCC 60.078 63.158 0.00 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1972 2013 0.457853 GTGATGTCCGCGCTCAACTA 60.458 55.000 5.56 0.0 0.00 2.24 R
1973 2014 1.738099 GTGATGTCCGCGCTCAACT 60.738 57.895 5.56 0.0 0.00 3.16 R
2758 2815 0.324614 TCTCATTGGGCTTCTTCGCA 59.675 50.000 0.00 0.0 0.00 5.10 R
2809 2866 4.234574 TGACTGTAGCTTGTTACACATCG 58.765 43.478 0.00 0.0 30.74 3.84 R
2872 2935 6.134754 CACTTTAGTACCCTAGATACCCAGT 58.865 44.000 0.00 0.0 0.00 4.00 R
3067 3130 5.912396 CAGAGAAGATAGATACACTTCGCAC 59.088 44.000 0.00 0.0 42.95 5.34 R
3120 3188 2.483714 GCCCTAAGATCTTCATGTCGCA 60.484 50.000 12.24 0.0 0.00 5.10 R
3158 3226 6.589523 CAGCCCTAAGATCTTCAGATTTATCG 59.410 42.308 12.24 0.0 34.37 2.92 R
3421 3493 1.079127 GTGTGGGCGCTGTACAGAT 60.079 57.895 27.08 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.658757 AACAAATACAGCGGTTGCATT 57.341 38.095 0.00 0.00 46.23 3.56
21 22 3.658757 ACAAATACAGCGGTTGCATTT 57.341 38.095 0.00 0.00 46.23 2.32
22 23 4.775058 ACAAATACAGCGGTTGCATTTA 57.225 36.364 0.00 0.00 46.23 1.40
23 24 5.127693 ACAAATACAGCGGTTGCATTTAA 57.872 34.783 0.00 0.00 46.23 1.52
24 25 5.533482 ACAAATACAGCGGTTGCATTTAAA 58.467 33.333 0.00 0.00 46.23 1.52
25 26 5.633182 ACAAATACAGCGGTTGCATTTAAAG 59.367 36.000 0.00 0.00 46.23 1.85
26 27 5.637006 AATACAGCGGTTGCATTTAAAGA 57.363 34.783 0.00 0.00 46.23 2.52
27 28 5.637006 ATACAGCGGTTGCATTTAAAGAA 57.363 34.783 0.00 0.00 46.23 2.52
28 29 4.314740 ACAGCGGTTGCATTTAAAGAAA 57.685 36.364 0.00 0.00 46.23 2.52
29 30 4.048504 ACAGCGGTTGCATTTAAAGAAAC 58.951 39.130 0.00 0.00 46.23 2.78
30 31 3.119463 CAGCGGTTGCATTTAAAGAAACG 59.881 43.478 9.37 9.37 46.23 3.60
31 32 2.160026 GCGGTTGCATTTAAAGAAACGC 60.160 45.455 18.31 18.31 42.15 4.84
32 33 2.088360 CGGTTGCATTTAAAGAAACGCG 59.912 45.455 3.53 3.53 36.54 6.01
33 34 3.301706 GGTTGCATTTAAAGAAACGCGA 58.698 40.909 15.93 0.00 36.54 5.87
34 35 3.731717 GGTTGCATTTAAAGAAACGCGAA 59.268 39.130 15.93 0.00 36.54 4.70
35 36 4.207429 GGTTGCATTTAAAGAAACGCGAAA 59.793 37.500 15.93 0.12 36.54 3.46
36 37 5.107645 GGTTGCATTTAAAGAAACGCGAAAT 60.108 36.000 15.93 3.09 36.54 2.17
37 38 6.351749 GTTGCATTTAAAGAAACGCGAAATT 58.648 32.000 15.93 4.41 36.54 1.82
38 39 7.358517 GGTTGCATTTAAAGAAACGCGAAATTA 60.359 33.333 15.93 1.68 36.54 1.40
39 40 7.259482 TGCATTTAAAGAAACGCGAAATTAG 57.741 32.000 15.93 0.00 36.54 1.73
40 41 6.858993 TGCATTTAAAGAAACGCGAAATTAGT 59.141 30.769 15.93 0.00 36.54 2.24
41 42 7.380065 TGCATTTAAAGAAACGCGAAATTAGTT 59.620 29.630 15.93 5.21 36.54 2.24
42 43 8.211838 GCATTTAAAGAAACGCGAAATTAGTTT 58.788 29.630 15.93 0.00 40.32 2.66
75 76 9.786105 AAAGAAATGGTTAATTTTGCAACAAAG 57.214 25.926 0.00 0.00 38.64 2.77
76 77 7.416817 AGAAATGGTTAATTTTGCAACAAAGC 58.583 30.769 0.00 1.68 38.64 3.51
77 78 6.690194 AATGGTTAATTTTGCAACAAAGCA 57.310 29.167 0.00 7.55 43.99 3.91
88 89 4.864633 TGCAACAAAGCAAATACAATCGA 58.135 34.783 0.00 0.00 42.46 3.59
89 90 4.679197 TGCAACAAAGCAAATACAATCGAC 59.321 37.500 0.00 0.00 42.46 4.20
90 91 4.917415 GCAACAAAGCAAATACAATCGACT 59.083 37.500 0.00 0.00 0.00 4.18
91 92 5.402270 GCAACAAAGCAAATACAATCGACTT 59.598 36.000 0.00 0.00 0.00 3.01
92 93 6.580791 GCAACAAAGCAAATACAATCGACTTA 59.419 34.615 0.00 0.00 0.00 2.24
93 94 7.273381 GCAACAAAGCAAATACAATCGACTTAT 59.727 33.333 0.00 0.00 0.00 1.73
94 95 9.128107 CAACAAAGCAAATACAATCGACTTATT 57.872 29.630 0.00 0.00 0.00 1.40
95 96 8.673626 ACAAAGCAAATACAATCGACTTATTG 57.326 30.769 0.00 0.00 41.65 1.90
96 97 7.273381 ACAAAGCAAATACAATCGACTTATTGC 59.727 33.333 12.03 12.03 39.93 3.56
97 98 6.435430 AGCAAATACAATCGACTTATTGCA 57.565 33.333 18.47 0.00 39.93 4.08
98 99 6.258160 AGCAAATACAATCGACTTATTGCAC 58.742 36.000 18.47 4.55 39.93 4.57
99 100 5.455525 GCAAATACAATCGACTTATTGCACC 59.544 40.000 14.00 0.00 39.93 5.01
100 101 6.550843 CAAATACAATCGACTTATTGCACCA 58.449 36.000 0.00 0.00 39.93 4.17
101 102 6.751514 AATACAATCGACTTATTGCACCAA 57.248 33.333 0.00 0.00 39.93 3.67
102 103 6.751514 ATACAATCGACTTATTGCACCAAA 57.248 33.333 0.00 0.00 39.93 3.28
103 104 5.446143 ACAATCGACTTATTGCACCAAAA 57.554 34.783 0.00 0.00 39.93 2.44
104 105 5.460646 ACAATCGACTTATTGCACCAAAAG 58.539 37.500 0.00 0.00 39.93 2.27
105 106 5.240623 ACAATCGACTTATTGCACCAAAAGA 59.759 36.000 0.00 0.00 39.93 2.52
106 107 5.957842 ATCGACTTATTGCACCAAAAGAA 57.042 34.783 0.00 0.00 0.00 2.52
107 108 5.103290 TCGACTTATTGCACCAAAAGAAC 57.897 39.130 0.00 0.00 0.00 3.01
108 109 4.576873 TCGACTTATTGCACCAAAAGAACA 59.423 37.500 0.00 0.00 0.00 3.18
109 110 5.066634 TCGACTTATTGCACCAAAAGAACAA 59.933 36.000 0.00 0.00 0.00 2.83
110 111 5.920273 CGACTTATTGCACCAAAAGAACAAT 59.080 36.000 0.00 0.00 35.31 2.71
111 112 6.129115 CGACTTATTGCACCAAAAGAACAATG 60.129 38.462 0.00 0.00 33.31 2.82
112 113 6.815089 ACTTATTGCACCAAAAGAACAATGA 58.185 32.000 0.00 0.00 33.31 2.57
113 114 7.271511 ACTTATTGCACCAAAAGAACAATGAA 58.728 30.769 0.00 0.00 33.31 2.57
114 115 7.933033 ACTTATTGCACCAAAAGAACAATGAAT 59.067 29.630 0.00 0.00 33.31 2.57
115 116 6.790285 ATTGCACCAAAAGAACAATGAATC 57.210 33.333 0.00 0.00 30.14 2.52
116 117 5.273674 TGCACCAAAAGAACAATGAATCA 57.726 34.783 0.00 0.00 0.00 2.57
117 118 5.668471 TGCACCAAAAGAACAATGAATCAA 58.332 33.333 0.00 0.00 0.00 2.57
118 119 5.523188 TGCACCAAAAGAACAATGAATCAAC 59.477 36.000 0.00 0.00 0.00 3.18
119 120 5.754890 GCACCAAAAGAACAATGAATCAACT 59.245 36.000 0.00 0.00 0.00 3.16
120 121 6.922957 GCACCAAAAGAACAATGAATCAACTA 59.077 34.615 0.00 0.00 0.00 2.24
121 122 7.437862 GCACCAAAAGAACAATGAATCAACTAA 59.562 33.333 0.00 0.00 0.00 2.24
122 123 9.311916 CACCAAAAGAACAATGAATCAACTAAA 57.688 29.630 0.00 0.00 0.00 1.85
123 124 9.533253 ACCAAAAGAACAATGAATCAACTAAAG 57.467 29.630 0.00 0.00 0.00 1.85
124 125 8.490355 CCAAAAGAACAATGAATCAACTAAAGC 58.510 33.333 0.00 0.00 0.00 3.51
125 126 7.858052 AAAGAACAATGAATCAACTAAAGCG 57.142 32.000 0.00 0.00 0.00 4.68
126 127 6.560253 AGAACAATGAATCAACTAAAGCGT 57.440 33.333 0.00 0.00 0.00 5.07
127 128 7.667043 AGAACAATGAATCAACTAAAGCGTA 57.333 32.000 0.00 0.00 0.00 4.42
128 129 8.268850 AGAACAATGAATCAACTAAAGCGTAT 57.731 30.769 0.00 0.00 0.00 3.06
129 130 8.730680 AGAACAATGAATCAACTAAAGCGTATT 58.269 29.630 0.00 0.00 0.00 1.89
130 131 8.895932 AACAATGAATCAACTAAAGCGTATTC 57.104 30.769 0.00 0.00 0.00 1.75
131 132 7.180079 ACAATGAATCAACTAAAGCGTATTCG 58.820 34.615 0.00 0.00 40.37 3.34
132 133 6.903883 ATGAATCAACTAAAGCGTATTCGT 57.096 33.333 0.00 0.00 39.49 3.85
133 134 6.327177 TGAATCAACTAAAGCGTATTCGTC 57.673 37.500 0.00 0.00 39.49 4.20
134 135 5.865013 TGAATCAACTAAAGCGTATTCGTCA 59.135 36.000 0.00 0.00 39.49 4.35
135 136 6.533723 TGAATCAACTAAAGCGTATTCGTCAT 59.466 34.615 0.00 0.00 39.49 3.06
136 137 5.696260 TCAACTAAAGCGTATTCGTCATG 57.304 39.130 0.00 0.00 39.49 3.07
137 138 4.032445 TCAACTAAAGCGTATTCGTCATGC 59.968 41.667 0.00 0.00 39.49 4.06
138 139 3.517602 ACTAAAGCGTATTCGTCATGCA 58.482 40.909 0.00 0.00 39.49 3.96
139 140 3.930229 ACTAAAGCGTATTCGTCATGCAA 59.070 39.130 0.00 0.00 39.49 4.08
140 141 3.822594 AAAGCGTATTCGTCATGCAAA 57.177 38.095 0.00 0.00 39.49 3.68
141 142 3.822594 AAGCGTATTCGTCATGCAAAA 57.177 38.095 0.00 0.00 39.49 2.44
142 143 3.822594 AGCGTATTCGTCATGCAAAAA 57.177 38.095 0.00 0.00 39.49 1.94
178 179 7.826690 GGTAACCATTTTCTGCTATTTTCTGA 58.173 34.615 0.00 0.00 0.00 3.27
179 180 7.755373 GGTAACCATTTTCTGCTATTTTCTGAC 59.245 37.037 0.00 0.00 0.00 3.51
180 181 6.272822 ACCATTTTCTGCTATTTTCTGACC 57.727 37.500 0.00 0.00 0.00 4.02
181 182 5.106157 ACCATTTTCTGCTATTTTCTGACCG 60.106 40.000 0.00 0.00 0.00 4.79
182 183 5.106157 CCATTTTCTGCTATTTTCTGACCGT 60.106 40.000 0.00 0.00 0.00 4.83
183 184 6.093495 CCATTTTCTGCTATTTTCTGACCGTA 59.907 38.462 0.00 0.00 0.00 4.02
184 185 6.721571 TTTTCTGCTATTTTCTGACCGTAG 57.278 37.500 0.00 0.00 0.00 3.51
185 186 3.782046 TCTGCTATTTTCTGACCGTAGC 58.218 45.455 7.18 7.18 38.52 3.58
186 187 2.535984 CTGCTATTTTCTGACCGTAGCG 59.464 50.000 8.77 0.00 40.37 4.26
187 188 2.164827 TGCTATTTTCTGACCGTAGCGA 59.835 45.455 0.00 0.00 40.37 4.93
188 189 3.184541 GCTATTTTCTGACCGTAGCGAA 58.815 45.455 0.00 0.00 0.00 4.70
189 190 3.802685 GCTATTTTCTGACCGTAGCGAAT 59.197 43.478 0.00 0.00 0.00 3.34
190 191 4.270325 GCTATTTTCTGACCGTAGCGAATT 59.730 41.667 0.00 0.00 0.00 2.17
191 192 5.461078 GCTATTTTCTGACCGTAGCGAATTA 59.539 40.000 0.00 0.00 0.00 1.40
192 193 6.145696 GCTATTTTCTGACCGTAGCGAATTAT 59.854 38.462 0.00 0.00 0.00 1.28
193 194 6.920569 ATTTTCTGACCGTAGCGAATTATT 57.079 33.333 0.00 0.00 0.00 1.40
194 195 6.730960 TTTTCTGACCGTAGCGAATTATTT 57.269 33.333 0.00 0.00 0.00 1.40
195 196 6.730960 TTTCTGACCGTAGCGAATTATTTT 57.269 33.333 0.00 0.00 0.00 1.82
196 197 5.712217 TCTGACCGTAGCGAATTATTTTG 57.288 39.130 0.00 0.00 0.00 2.44
197 198 5.172934 TCTGACCGTAGCGAATTATTTTGT 58.827 37.500 0.00 0.00 0.00 2.83
198 199 5.640357 TCTGACCGTAGCGAATTATTTTGTT 59.360 36.000 0.00 0.00 0.00 2.83
199 200 6.148150 TCTGACCGTAGCGAATTATTTTGTTT 59.852 34.615 0.00 0.00 0.00 2.83
200 201 6.670233 TGACCGTAGCGAATTATTTTGTTTT 58.330 32.000 0.00 0.00 0.00 2.43
201 202 6.797995 TGACCGTAGCGAATTATTTTGTTTTC 59.202 34.615 0.00 0.00 0.00 2.29
202 203 6.670233 ACCGTAGCGAATTATTTTGTTTTCA 58.330 32.000 0.00 0.00 0.00 2.69
203 204 6.799925 ACCGTAGCGAATTATTTTGTTTTCAG 59.200 34.615 0.00 0.00 0.00 3.02
204 205 6.799925 CCGTAGCGAATTATTTTGTTTTCAGT 59.200 34.615 0.00 0.00 0.00 3.41
205 206 7.958567 CCGTAGCGAATTATTTTGTTTTCAGTA 59.041 33.333 0.00 0.00 0.00 2.74
206 207 8.985694 CGTAGCGAATTATTTTGTTTTCAGTAG 58.014 33.333 0.00 0.00 0.00 2.57
207 208 7.796958 AGCGAATTATTTTGTTTTCAGTAGC 57.203 32.000 0.00 0.00 0.00 3.58
208 209 7.367285 AGCGAATTATTTTGTTTTCAGTAGCA 58.633 30.769 0.00 0.00 0.00 3.49
209 210 7.865385 AGCGAATTATTTTGTTTTCAGTAGCAA 59.135 29.630 0.00 0.00 0.00 3.91
210 211 8.155923 GCGAATTATTTTGTTTTCAGTAGCAAG 58.844 33.333 0.00 0.00 0.00 4.01
211 212 8.638565 CGAATTATTTTGTTTTCAGTAGCAAGG 58.361 33.333 0.00 0.00 0.00 3.61
212 213 9.691362 GAATTATTTTGTTTTCAGTAGCAAGGA 57.309 29.630 0.00 0.00 0.00 3.36
216 217 8.962884 ATTTTGTTTTCAGTAGCAAGGAAATT 57.037 26.923 0.00 0.00 31.30 1.82
218 219 9.877178 TTTTGTTTTCAGTAGCAAGGAAATTAA 57.123 25.926 0.00 0.00 31.30 1.40
219 220 8.865590 TTGTTTTCAGTAGCAAGGAAATTAAC 57.134 30.769 0.00 0.00 31.30 2.01
220 221 8.232913 TGTTTTCAGTAGCAAGGAAATTAACT 57.767 30.769 0.00 0.00 31.30 2.24
221 222 8.349983 TGTTTTCAGTAGCAAGGAAATTAACTC 58.650 33.333 0.00 0.00 31.30 3.01
222 223 6.721571 TTCAGTAGCAAGGAAATTAACTCG 57.278 37.500 0.00 0.00 0.00 4.18
223 224 6.032956 TCAGTAGCAAGGAAATTAACTCGA 57.967 37.500 0.00 0.00 0.00 4.04
224 225 6.100004 TCAGTAGCAAGGAAATTAACTCGAG 58.900 40.000 11.84 11.84 0.00 4.04
225 226 5.292101 CAGTAGCAAGGAAATTAACTCGAGG 59.708 44.000 18.41 0.00 0.00 4.63
226 227 3.610911 AGCAAGGAAATTAACTCGAGGG 58.389 45.455 18.41 0.00 0.00 4.30
227 228 3.263425 AGCAAGGAAATTAACTCGAGGGA 59.737 43.478 18.41 0.16 0.00 4.20
228 229 3.374367 GCAAGGAAATTAACTCGAGGGAC 59.626 47.826 18.41 0.82 0.00 4.46
229 230 3.908643 AGGAAATTAACTCGAGGGACC 57.091 47.619 18.41 9.69 0.00 4.46
230 231 3.178865 AGGAAATTAACTCGAGGGACCA 58.821 45.455 18.41 0.00 0.00 4.02
231 232 3.585732 AGGAAATTAACTCGAGGGACCAA 59.414 43.478 18.41 3.28 0.00 3.67
232 233 4.042435 AGGAAATTAACTCGAGGGACCAAA 59.958 41.667 18.41 1.85 0.00 3.28
233 234 4.948004 GGAAATTAACTCGAGGGACCAAAT 59.052 41.667 18.41 4.13 0.00 2.32
234 235 5.417894 GGAAATTAACTCGAGGGACCAAATT 59.582 40.000 18.41 9.61 0.00 1.82
235 236 6.071560 GGAAATTAACTCGAGGGACCAAATTT 60.072 38.462 18.41 16.35 0.00 1.82
236 237 6.911250 AATTAACTCGAGGGACCAAATTTT 57.089 33.333 18.41 0.00 0.00 1.82
237 238 5.699097 TTAACTCGAGGGACCAAATTTTG 57.301 39.130 18.41 1.99 0.00 2.44
300 301 9.875708 TTCAATAAATAGGCATATTTGGTAGGT 57.124 29.630 22.98 1.11 40.88 3.08
301 302 9.875708 TCAATAAATAGGCATATTTGGTAGGTT 57.124 29.630 22.98 8.05 40.88 3.50
336 337 9.230122 TCACAATTTATCATCAAAAGCTAGACA 57.770 29.630 0.00 0.00 0.00 3.41
337 338 9.282247 CACAATTTATCATCAAAAGCTAGACAC 57.718 33.333 0.00 0.00 0.00 3.67
338 339 8.177663 ACAATTTATCATCAAAAGCTAGACACG 58.822 33.333 0.00 0.00 0.00 4.49
339 340 6.662414 TTTATCATCAAAAGCTAGACACGG 57.338 37.500 0.00 0.00 0.00 4.94
340 341 3.953712 TCATCAAAAGCTAGACACGGA 57.046 42.857 0.00 0.00 0.00 4.69
341 342 4.471904 TCATCAAAAGCTAGACACGGAT 57.528 40.909 0.00 0.00 0.00 4.18
342 343 5.592104 TCATCAAAAGCTAGACACGGATA 57.408 39.130 0.00 0.00 0.00 2.59
343 344 5.972935 TCATCAAAAGCTAGACACGGATAA 58.027 37.500 0.00 0.00 0.00 1.75
344 345 6.042777 TCATCAAAAGCTAGACACGGATAAG 58.957 40.000 0.00 0.00 0.00 1.73
345 346 5.401531 TCAAAAGCTAGACACGGATAAGT 57.598 39.130 0.00 0.00 0.00 2.24
346 347 6.519679 TCAAAAGCTAGACACGGATAAGTA 57.480 37.500 0.00 0.00 0.00 2.24
347 348 6.561614 TCAAAAGCTAGACACGGATAAGTAG 58.438 40.000 0.00 0.00 0.00 2.57
348 349 5.517322 AAAGCTAGACACGGATAAGTAGG 57.483 43.478 0.00 0.00 0.00 3.18
349 350 4.167652 AGCTAGACACGGATAAGTAGGT 57.832 45.455 0.00 0.00 0.00 3.08
350 351 5.301835 AGCTAGACACGGATAAGTAGGTA 57.698 43.478 0.00 0.00 0.00 3.08
351 352 5.688807 AGCTAGACACGGATAAGTAGGTAA 58.311 41.667 0.00 0.00 0.00 2.85
352 353 5.764192 AGCTAGACACGGATAAGTAGGTAAG 59.236 44.000 0.00 0.00 0.00 2.34
353 354 5.762218 GCTAGACACGGATAAGTAGGTAAGA 59.238 44.000 0.00 0.00 0.00 2.10
354 355 6.430616 GCTAGACACGGATAAGTAGGTAAGAT 59.569 42.308 0.00 0.00 0.00 2.40
355 356 7.605691 GCTAGACACGGATAAGTAGGTAAGATA 59.394 40.741 0.00 0.00 0.00 1.98
356 357 9.499479 CTAGACACGGATAAGTAGGTAAGATAA 57.501 37.037 0.00 0.00 0.00 1.75
357 358 8.757982 AGACACGGATAAGTAGGTAAGATAAA 57.242 34.615 0.00 0.00 0.00 1.40
358 359 9.364653 AGACACGGATAAGTAGGTAAGATAAAT 57.635 33.333 0.00 0.00 0.00 1.40
359 360 9.978044 GACACGGATAAGTAGGTAAGATAAATT 57.022 33.333 0.00 0.00 0.00 1.82
360 361 9.978044 ACACGGATAAGTAGGTAAGATAAATTC 57.022 33.333 0.00 0.00 0.00 2.17
361 362 9.976511 CACGGATAAGTAGGTAAGATAAATTCA 57.023 33.333 0.00 0.00 0.00 2.57
376 377 9.836864 AAGATAAATTCAAAATTCATTAGGCCC 57.163 29.630 0.00 0.00 0.00 5.80
377 378 8.991275 AGATAAATTCAAAATTCATTAGGCCCA 58.009 29.630 0.00 0.00 0.00 5.36
378 379 8.962884 ATAAATTCAAAATTCATTAGGCCCAC 57.037 30.769 0.00 0.00 0.00 4.61
379 380 6.625532 AATTCAAAATTCATTAGGCCCACT 57.374 33.333 0.00 0.00 0.00 4.00
380 381 5.404466 TTCAAAATTCATTAGGCCCACTG 57.596 39.130 0.00 0.00 0.00 3.66
381 382 4.415596 TCAAAATTCATTAGGCCCACTGT 58.584 39.130 0.00 0.00 0.00 3.55
382 383 4.837860 TCAAAATTCATTAGGCCCACTGTT 59.162 37.500 0.00 0.00 0.00 3.16
383 384 6.013379 TCAAAATTCATTAGGCCCACTGTTA 58.987 36.000 0.00 0.00 0.00 2.41
384 385 6.152661 TCAAAATTCATTAGGCCCACTGTTAG 59.847 38.462 0.00 0.00 0.00 2.34
385 386 2.710096 TCATTAGGCCCACTGTTAGC 57.290 50.000 0.00 0.00 0.00 3.09
386 387 2.196595 TCATTAGGCCCACTGTTAGCT 58.803 47.619 0.00 0.00 0.00 3.32
387 388 2.576191 TCATTAGGCCCACTGTTAGCTT 59.424 45.455 0.00 0.00 0.00 3.74
388 389 3.778075 TCATTAGGCCCACTGTTAGCTTA 59.222 43.478 0.00 0.00 0.00 3.09
389 390 4.412199 TCATTAGGCCCACTGTTAGCTTAT 59.588 41.667 0.00 0.00 0.00 1.73
390 391 4.855298 TTAGGCCCACTGTTAGCTTATT 57.145 40.909 0.00 0.00 0.00 1.40
391 392 3.739401 AGGCCCACTGTTAGCTTATTT 57.261 42.857 0.00 0.00 0.00 1.40
392 393 4.047627 AGGCCCACTGTTAGCTTATTTT 57.952 40.909 0.00 0.00 0.00 1.82
393 394 3.763897 AGGCCCACTGTTAGCTTATTTTG 59.236 43.478 0.00 0.00 0.00 2.44
394 395 3.509967 GGCCCACTGTTAGCTTATTTTGT 59.490 43.478 0.00 0.00 0.00 2.83
395 396 4.703093 GGCCCACTGTTAGCTTATTTTGTA 59.297 41.667 0.00 0.00 0.00 2.41
396 397 5.359860 GGCCCACTGTTAGCTTATTTTGTAT 59.640 40.000 0.00 0.00 0.00 2.29
397 398 6.265577 GCCCACTGTTAGCTTATTTTGTATG 58.734 40.000 0.00 0.00 0.00 2.39
398 399 6.265577 CCCACTGTTAGCTTATTTTGTATGC 58.734 40.000 0.00 0.00 0.00 3.14
399 400 6.265577 CCACTGTTAGCTTATTTTGTATGCC 58.734 40.000 0.00 0.00 0.00 4.40
400 401 6.095440 CCACTGTTAGCTTATTTTGTATGCCT 59.905 38.462 0.00 0.00 0.00 4.75
401 402 7.189512 CACTGTTAGCTTATTTTGTATGCCTC 58.810 38.462 0.00 0.00 0.00 4.70
402 403 7.066284 CACTGTTAGCTTATTTTGTATGCCTCT 59.934 37.037 0.00 0.00 0.00 3.69
403 404 7.066284 ACTGTTAGCTTATTTTGTATGCCTCTG 59.934 37.037 0.00 0.00 0.00 3.35
404 405 4.907879 AGCTTATTTTGTATGCCTCTGC 57.092 40.909 0.00 0.00 38.26 4.26
405 406 3.313526 AGCTTATTTTGTATGCCTCTGCG 59.686 43.478 0.00 0.00 41.78 5.18
406 407 3.621794 CTTATTTTGTATGCCTCTGCGC 58.378 45.455 0.00 0.00 41.78 6.09
407 408 0.740737 ATTTTGTATGCCTCTGCGCC 59.259 50.000 4.18 0.00 41.78 6.53
408 409 0.607762 TTTTGTATGCCTCTGCGCCA 60.608 50.000 4.18 0.00 41.78 5.69
409 410 0.394216 TTTGTATGCCTCTGCGCCAT 60.394 50.000 4.18 2.70 41.78 4.40
410 411 0.394216 TTGTATGCCTCTGCGCCATT 60.394 50.000 4.18 0.00 41.78 3.16
411 412 0.394216 TGTATGCCTCTGCGCCATTT 60.394 50.000 4.18 0.00 41.78 2.32
412 413 0.740737 GTATGCCTCTGCGCCATTTT 59.259 50.000 4.18 0.00 41.78 1.82
413 414 1.024271 TATGCCTCTGCGCCATTTTC 58.976 50.000 4.18 0.00 41.78 2.29
414 415 0.682209 ATGCCTCTGCGCCATTTTCT 60.682 50.000 4.18 0.00 41.78 2.52
415 416 1.138247 GCCTCTGCGCCATTTTCTG 59.862 57.895 4.18 0.00 0.00 3.02
416 417 1.308069 GCCTCTGCGCCATTTTCTGA 61.308 55.000 4.18 0.00 0.00 3.27
417 418 1.386533 CCTCTGCGCCATTTTCTGAT 58.613 50.000 4.18 0.00 0.00 2.90
418 419 1.332997 CCTCTGCGCCATTTTCTGATC 59.667 52.381 4.18 0.00 0.00 2.92
419 420 2.286872 CTCTGCGCCATTTTCTGATCT 58.713 47.619 4.18 0.00 0.00 2.75
420 421 2.681848 CTCTGCGCCATTTTCTGATCTT 59.318 45.455 4.18 0.00 0.00 2.40
421 422 2.679837 TCTGCGCCATTTTCTGATCTTC 59.320 45.455 4.18 0.00 0.00 2.87
422 423 1.745087 TGCGCCATTTTCTGATCTTCC 59.255 47.619 4.18 0.00 0.00 3.46
423 424 1.745087 GCGCCATTTTCTGATCTTCCA 59.255 47.619 0.00 0.00 0.00 3.53
424 425 2.360165 GCGCCATTTTCTGATCTTCCAT 59.640 45.455 0.00 0.00 0.00 3.41
425 426 3.181483 GCGCCATTTTCTGATCTTCCATT 60.181 43.478 0.00 0.00 0.00 3.16
426 427 4.357142 CGCCATTTTCTGATCTTCCATTG 58.643 43.478 0.00 0.00 0.00 2.82
427 428 4.117685 GCCATTTTCTGATCTTCCATTGC 58.882 43.478 0.00 0.00 0.00 3.56
428 429 4.382254 GCCATTTTCTGATCTTCCATTGCA 60.382 41.667 0.00 0.00 0.00 4.08
429 430 5.726397 CCATTTTCTGATCTTCCATTGCAA 58.274 37.500 0.00 0.00 0.00 4.08
430 431 5.579511 CCATTTTCTGATCTTCCATTGCAAC 59.420 40.000 0.00 0.00 0.00 4.17
431 432 4.424061 TTTCTGATCTTCCATTGCAACG 57.576 40.909 0.00 0.00 0.00 4.10
432 433 1.739466 TCTGATCTTCCATTGCAACGC 59.261 47.619 0.00 0.00 0.00 4.84
433 434 1.469703 CTGATCTTCCATTGCAACGCA 59.530 47.619 0.00 0.00 36.47 5.24
434 435 1.199789 TGATCTTCCATTGCAACGCAC 59.800 47.619 0.00 0.00 38.71 5.34
435 436 0.168788 ATCTTCCATTGCAACGCACG 59.831 50.000 0.00 0.00 38.71 5.34
436 437 1.442520 CTTCCATTGCAACGCACGG 60.443 57.895 0.00 0.00 38.71 4.94
437 438 2.128853 CTTCCATTGCAACGCACGGT 62.129 55.000 0.00 0.00 38.71 4.83
438 439 2.123988 TTCCATTGCAACGCACGGTC 62.124 55.000 0.00 0.00 38.71 4.79
439 440 2.636462 CATTGCAACGCACGGTCA 59.364 55.556 0.00 0.00 38.71 4.02
440 441 1.209898 CATTGCAACGCACGGTCAT 59.790 52.632 0.00 0.00 38.71 3.06
441 442 1.066656 CATTGCAACGCACGGTCATG 61.067 55.000 0.00 0.00 38.71 3.07
442 443 1.233950 ATTGCAACGCACGGTCATGA 61.234 50.000 0.00 0.00 38.71 3.07
443 444 1.233950 TTGCAACGCACGGTCATGAT 61.234 50.000 0.00 0.00 38.71 2.45
444 445 1.233950 TGCAACGCACGGTCATGATT 61.234 50.000 0.00 0.00 31.71 2.57
445 446 0.724549 GCAACGCACGGTCATGATTA 59.275 50.000 0.00 0.00 0.00 1.75
446 447 1.529010 GCAACGCACGGTCATGATTAC 60.529 52.381 0.00 0.00 0.00 1.89
447 448 1.999735 CAACGCACGGTCATGATTACT 59.000 47.619 0.00 0.00 0.00 2.24
448 449 3.183754 CAACGCACGGTCATGATTACTA 58.816 45.455 0.00 0.00 0.00 1.82
449 450 3.513680 ACGCACGGTCATGATTACTAA 57.486 42.857 0.00 0.00 0.00 2.24
450 451 4.054780 ACGCACGGTCATGATTACTAAT 57.945 40.909 0.00 0.00 0.00 1.73
451 452 5.190992 ACGCACGGTCATGATTACTAATA 57.809 39.130 0.00 0.00 0.00 0.98
452 453 4.980434 ACGCACGGTCATGATTACTAATAC 59.020 41.667 0.00 0.00 0.00 1.89
453 454 4.979815 CGCACGGTCATGATTACTAATACA 59.020 41.667 0.00 0.00 0.00 2.29
454 455 5.460748 CGCACGGTCATGATTACTAATACAA 59.539 40.000 0.00 0.00 0.00 2.41
455 456 6.561533 CGCACGGTCATGATTACTAATACAAC 60.562 42.308 0.00 0.00 0.00 3.32
456 457 6.479001 GCACGGTCATGATTACTAATACAACT 59.521 38.462 0.00 0.00 0.00 3.16
457 458 7.650504 GCACGGTCATGATTACTAATACAACTA 59.349 37.037 0.00 0.00 0.00 2.24
458 459 9.524106 CACGGTCATGATTACTAATACAACTAA 57.476 33.333 0.00 0.00 0.00 2.24
492 493 6.533639 TTTTTCCTAAAGACCCCCTCTTAA 57.466 37.500 0.00 0.00 38.37 1.85
493 494 6.730001 TTTTCCTAAAGACCCCCTCTTAAT 57.270 37.500 0.00 0.00 38.37 1.40
494 495 6.730001 TTTCCTAAAGACCCCCTCTTAATT 57.270 37.500 0.00 0.00 38.37 1.40
495 496 7.834100 TTTCCTAAAGACCCCCTCTTAATTA 57.166 36.000 0.00 0.00 38.37 1.40
496 497 6.819947 TCCTAAAGACCCCCTCTTAATTAC 57.180 41.667 0.00 0.00 38.37 1.89
497 498 6.518534 TCCTAAAGACCCCCTCTTAATTACT 58.481 40.000 0.00 0.00 38.37 2.24
498 499 6.970041 TCCTAAAGACCCCCTCTTAATTACTT 59.030 38.462 0.00 0.00 38.37 2.24
499 500 7.463295 TCCTAAAGACCCCCTCTTAATTACTTT 59.537 37.037 0.00 0.00 38.37 2.66
500 501 7.774157 CCTAAAGACCCCCTCTTAATTACTTTC 59.226 40.741 0.00 0.00 38.37 2.62
501 502 6.713731 AAGACCCCCTCTTAATTACTTTCA 57.286 37.500 0.00 0.00 37.46 2.69
502 503 6.063496 AGACCCCCTCTTAATTACTTTCAC 57.937 41.667 0.00 0.00 0.00 3.18
503 504 5.045066 AGACCCCCTCTTAATTACTTTCACC 60.045 44.000 0.00 0.00 0.00 4.02
504 505 4.604490 ACCCCCTCTTAATTACTTTCACCA 59.396 41.667 0.00 0.00 0.00 4.17
505 506 4.948004 CCCCCTCTTAATTACTTTCACCAC 59.052 45.833 0.00 0.00 0.00 4.16
506 507 5.515886 CCCCCTCTTAATTACTTTCACCACA 60.516 44.000 0.00 0.00 0.00 4.17
507 508 5.414765 CCCCTCTTAATTACTTTCACCACAC 59.585 44.000 0.00 0.00 0.00 3.82
508 509 6.238648 CCCTCTTAATTACTTTCACCACACT 58.761 40.000 0.00 0.00 0.00 3.55
509 510 6.371825 CCCTCTTAATTACTTTCACCACACTC 59.628 42.308 0.00 0.00 0.00 3.51
510 511 6.090898 CCTCTTAATTACTTTCACCACACTCG 59.909 42.308 0.00 0.00 0.00 4.18
511 512 5.929992 TCTTAATTACTTTCACCACACTCGG 59.070 40.000 0.00 0.00 0.00 4.63
512 513 1.873698 TTACTTTCACCACACTCGGC 58.126 50.000 0.00 0.00 0.00 5.54
513 514 0.034337 TACTTTCACCACACTCGGCC 59.966 55.000 0.00 0.00 0.00 6.13
514 515 1.227823 CTTTCACCACACTCGGCCA 60.228 57.895 2.24 0.00 0.00 5.36
515 516 0.606401 CTTTCACCACACTCGGCCAT 60.606 55.000 2.24 0.00 0.00 4.40
516 517 0.687920 TTTCACCACACTCGGCCATA 59.312 50.000 2.24 0.00 0.00 2.74
517 518 0.036765 TTCACCACACTCGGCCATAC 60.037 55.000 2.24 0.00 0.00 2.39
518 519 1.449601 CACCACACTCGGCCATACC 60.450 63.158 2.24 0.00 0.00 2.73
519 520 1.612442 ACCACACTCGGCCATACCT 60.612 57.895 2.24 0.00 35.61 3.08
520 521 1.153369 CCACACTCGGCCATACCTG 60.153 63.158 2.24 0.00 35.61 4.00
521 522 1.153369 CACACTCGGCCATACCTGG 60.153 63.158 2.24 0.00 46.17 4.45
529 530 3.918544 CCATACCTGGCCAAACGG 58.081 61.111 7.01 7.56 35.23 4.44
572 573 3.442996 GCCTGTGCTAATCGTGTCT 57.557 52.632 0.00 0.00 33.53 3.41
573 574 1.002366 GCCTGTGCTAATCGTGTCTG 58.998 55.000 0.00 0.00 33.53 3.51
574 575 1.645034 CCTGTGCTAATCGTGTCTGG 58.355 55.000 0.00 0.00 0.00 3.86
575 576 1.002366 CTGTGCTAATCGTGTCTGGC 58.998 55.000 0.00 0.00 0.00 4.85
576 577 0.391130 TGTGCTAATCGTGTCTGGCC 60.391 55.000 0.00 0.00 0.00 5.36
577 578 1.090052 GTGCTAATCGTGTCTGGCCC 61.090 60.000 0.00 0.00 0.00 5.80
578 579 1.883084 GCTAATCGTGTCTGGCCCG 60.883 63.158 0.00 0.00 0.00 6.13
579 580 1.227263 CTAATCGTGTCTGGCCCGG 60.227 63.158 0.00 0.00 0.00 5.73
580 581 3.379865 TAATCGTGTCTGGCCCGGC 62.380 63.158 0.00 0.00 0.00 6.13
602 603 2.735478 CTCGCCGTGGCACGTTTA 60.735 61.111 34.74 19.65 40.58 2.01
603 604 2.279985 TCGCCGTGGCACGTTTAA 60.280 55.556 34.74 16.82 40.58 1.52
604 605 1.632046 CTCGCCGTGGCACGTTTAAT 61.632 55.000 34.74 0.00 40.58 1.40
605 606 0.389556 TCGCCGTGGCACGTTTAATA 60.390 50.000 34.74 13.78 40.58 0.98
606 607 0.025770 CGCCGTGGCACGTTTAATAG 59.974 55.000 34.74 20.30 40.58 1.73
607 608 0.247934 GCCGTGGCACGTTTAATAGC 60.248 55.000 34.74 25.38 40.58 2.97
611 612 2.019337 GGCACGTTTAATAGCCGGG 58.981 57.895 2.18 0.00 37.41 5.73
612 613 1.354155 GCACGTTTAATAGCCGGGC 59.646 57.895 12.11 12.11 44.35 6.13
613 614 2.019337 CACGTTTAATAGCCGGGCC 58.981 57.895 17.02 0.00 0.00 5.80
614 615 1.522130 ACGTTTAATAGCCGGGCCG 60.522 57.895 21.46 21.46 0.00 6.13
615 616 1.522130 CGTTTAATAGCCGGGCCGT 60.522 57.895 26.32 10.07 0.00 5.68
616 617 1.768112 CGTTTAATAGCCGGGCCGTG 61.768 60.000 26.32 17.25 0.00 4.94
617 618 1.820481 TTTAATAGCCGGGCCGTGC 60.820 57.895 26.32 25.86 0.00 5.34
668 669 3.612251 GGCACGGCCTGACTAGTA 58.388 61.111 0.00 0.00 46.69 1.82
669 670 1.895238 GGCACGGCCTGACTAGTAA 59.105 57.895 0.00 0.00 46.69 2.24
670 671 0.248289 GGCACGGCCTGACTAGTAAA 59.752 55.000 0.00 0.00 46.69 2.01
671 672 1.134491 GGCACGGCCTGACTAGTAAAT 60.134 52.381 0.00 0.00 46.69 1.40
672 673 1.933853 GCACGGCCTGACTAGTAAATG 59.066 52.381 0.00 0.00 0.00 2.32
673 674 2.550978 CACGGCCTGACTAGTAAATGG 58.449 52.381 0.00 0.00 0.00 3.16
674 675 1.134491 ACGGCCTGACTAGTAAATGGC 60.134 52.381 15.38 15.38 39.61 4.40
676 677 1.968704 GCCTGACTAGTAAATGGCCC 58.031 55.000 0.00 0.00 34.81 5.80
677 678 1.810412 GCCTGACTAGTAAATGGCCCG 60.810 57.143 0.00 0.00 34.81 6.13
678 679 1.202651 CCTGACTAGTAAATGGCCCGG 60.203 57.143 0.00 0.00 0.00 5.73
679 680 0.179468 TGACTAGTAAATGGCCCGGC 59.821 55.000 0.00 0.00 0.00 6.13
696 697 2.900337 CCCGATGGCCCGTTTAGC 60.900 66.667 0.00 0.00 0.00 3.09
697 698 2.124901 CCGATGGCCCGTTTAGCA 60.125 61.111 0.00 0.00 0.00 3.49
698 699 2.469516 CCGATGGCCCGTTTAGCAC 61.470 63.158 0.00 0.00 0.00 4.40
706 707 3.650369 CGTTTAGCACGTTGGGCT 58.350 55.556 4.18 4.18 44.49 5.19
707 708 1.206578 CGTTTAGCACGTTGGGCTG 59.793 57.895 8.99 0.00 44.49 4.85
708 709 1.081442 GTTTAGCACGTTGGGCTGC 60.081 57.895 8.99 0.00 42.62 5.25
709 710 1.527148 TTTAGCACGTTGGGCTGCA 60.527 52.632 8.99 0.00 42.62 4.41
710 711 0.893270 TTTAGCACGTTGGGCTGCAT 60.893 50.000 8.99 0.00 42.62 3.96
711 712 1.585267 TTAGCACGTTGGGCTGCATG 61.585 55.000 8.99 0.00 42.62 4.06
712 713 2.746412 TAGCACGTTGGGCTGCATGT 62.746 55.000 8.99 0.00 42.62 3.21
713 714 3.041701 CACGTTGGGCTGCATGTT 58.958 55.556 0.50 0.00 0.00 2.71
714 715 1.363443 CACGTTGGGCTGCATGTTT 59.637 52.632 0.50 0.00 0.00 2.83
715 716 0.249405 CACGTTGGGCTGCATGTTTT 60.249 50.000 0.50 0.00 0.00 2.43
716 717 0.031994 ACGTTGGGCTGCATGTTTTC 59.968 50.000 0.50 0.00 0.00 2.29
717 718 0.031857 CGTTGGGCTGCATGTTTTCA 59.968 50.000 0.50 0.00 0.00 2.69
718 719 1.537776 CGTTGGGCTGCATGTTTTCAA 60.538 47.619 0.50 0.00 0.00 2.69
719 720 1.866601 GTTGGGCTGCATGTTTTCAAC 59.133 47.619 0.50 0.45 0.00 3.18
720 721 0.392336 TGGGCTGCATGTTTTCAACC 59.608 50.000 0.50 0.00 0.00 3.77
721 722 0.681175 GGGCTGCATGTTTTCAACCT 59.319 50.000 0.50 0.00 0.00 3.50
722 723 1.606224 GGGCTGCATGTTTTCAACCTG 60.606 52.381 0.50 0.00 0.00 4.00
723 724 1.069049 GGCTGCATGTTTTCAACCTGT 59.931 47.619 0.50 0.00 30.82 4.00
724 725 2.483538 GGCTGCATGTTTTCAACCTGTT 60.484 45.455 0.50 0.00 30.82 3.16
725 726 2.540931 GCTGCATGTTTTCAACCTGTTG 59.459 45.455 3.61 3.61 41.71 3.33
726 727 3.125316 CTGCATGTTTTCAACCTGTTGG 58.875 45.455 9.94 0.00 40.78 3.77
727 728 2.158986 TGCATGTTTTCAACCTGTTGGG 60.159 45.455 9.94 0.00 40.78 4.12
728 729 2.482864 CATGTTTTCAACCTGTTGGGC 58.517 47.619 9.94 0.20 40.78 5.36
729 730 1.859302 TGTTTTCAACCTGTTGGGCT 58.141 45.000 9.94 0.00 40.78 5.19
730 731 1.480137 TGTTTTCAACCTGTTGGGCTG 59.520 47.619 9.94 0.00 40.78 4.85
731 732 1.118838 TTTTCAACCTGTTGGGCTGG 58.881 50.000 9.94 0.00 40.78 4.85
736 737 3.315544 ACCTGTTGGGCTGGTTTTT 57.684 47.368 0.00 0.00 45.59 1.94
737 738 2.463047 ACCTGTTGGGCTGGTTTTTA 57.537 45.000 0.00 0.00 45.59 1.52
738 739 2.316108 ACCTGTTGGGCTGGTTTTTAG 58.684 47.619 0.00 0.00 45.59 1.85
739 740 1.618343 CCTGTTGGGCTGGTTTTTAGG 59.382 52.381 0.00 0.00 0.00 2.69
740 741 1.000843 CTGTTGGGCTGGTTTTTAGGC 59.999 52.381 0.00 0.00 39.76 3.93
746 747 3.801114 GGCTGGTTTTTAGGCCTATTG 57.199 47.619 14.74 0.49 41.20 1.90
747 748 2.430694 GGCTGGTTTTTAGGCCTATTGG 59.569 50.000 14.74 1.56 41.20 3.16
748 749 2.430694 GCTGGTTTTTAGGCCTATTGGG 59.569 50.000 14.74 2.10 38.36 4.12
749 750 3.708451 CTGGTTTTTAGGCCTATTGGGT 58.292 45.455 14.74 0.00 37.43 4.51
750 751 4.862371 CTGGTTTTTAGGCCTATTGGGTA 58.138 43.478 14.74 0.00 37.43 3.69
751 752 5.454966 CTGGTTTTTAGGCCTATTGGGTAT 58.545 41.667 14.74 0.00 37.43 2.73
752 753 6.593759 TGGTTTTTAGGCCTATTGGGTATA 57.406 37.500 14.74 0.00 37.43 1.47
753 754 7.169287 TGGTTTTTAGGCCTATTGGGTATAT 57.831 36.000 14.74 0.00 37.43 0.86
754 755 7.597327 TGGTTTTTAGGCCTATTGGGTATATT 58.403 34.615 14.74 0.00 37.43 1.28
755 756 8.068733 TGGTTTTTAGGCCTATTGGGTATATTT 58.931 33.333 14.74 0.00 37.43 1.40
756 757 8.930527 GGTTTTTAGGCCTATTGGGTATATTTT 58.069 33.333 14.74 0.00 37.43 1.82
814 815 3.500455 AAAAATAAACCGGCCGTGC 57.500 47.368 26.12 0.00 0.00 5.34
815 816 0.038067 AAAAATAAACCGGCCGTGCC 60.038 50.000 26.12 4.96 46.75 5.01
902 903 3.784412 CGTTTAGCCCGTGCCGTG 61.784 66.667 0.00 0.00 38.69 4.94
903 904 4.097863 GTTTAGCCCGTGCCGTGC 62.098 66.667 0.00 0.00 38.69 5.34
977 978 2.363306 CCCATTTGGCCAGCTATACA 57.637 50.000 5.11 0.00 0.00 2.29
978 979 1.956477 CCCATTTGGCCAGCTATACAC 59.044 52.381 5.11 0.00 0.00 2.90
979 980 2.423373 CCCATTTGGCCAGCTATACACT 60.423 50.000 5.11 0.00 0.00 3.55
980 981 2.880890 CCATTTGGCCAGCTATACACTC 59.119 50.000 5.11 0.00 0.00 3.51
981 982 2.309528 TTTGGCCAGCTATACACTCG 57.690 50.000 5.11 0.00 0.00 4.18
982 983 0.464036 TTGGCCAGCTATACACTCGG 59.536 55.000 5.11 0.00 0.00 4.63
983 984 1.301009 GGCCAGCTATACACTCGGC 60.301 63.158 0.00 0.00 38.85 5.54
984 985 1.301009 GCCAGCTATACACTCGGCC 60.301 63.158 0.00 0.00 33.31 6.13
985 986 1.007271 CCAGCTATACACTCGGCCG 60.007 63.158 22.12 22.12 0.00 6.13
986 987 1.452953 CCAGCTATACACTCGGCCGA 61.453 60.000 29.03 29.03 0.00 5.54
987 988 0.317938 CAGCTATACACTCGGCCGAC 60.318 60.000 27.28 12.29 0.00 4.79
988 989 1.370172 GCTATACACTCGGCCGACG 60.370 63.158 27.28 22.20 46.11 5.12
998 999 3.782042 GGCCGACGAGTAAAGCTG 58.218 61.111 0.00 0.00 0.00 4.24
999 1000 1.080025 GGCCGACGAGTAAAGCTGT 60.080 57.895 0.00 0.00 0.00 4.40
1000 1001 0.171903 GGCCGACGAGTAAAGCTGTA 59.828 55.000 0.00 0.00 0.00 2.74
1001 1002 1.546834 GCCGACGAGTAAAGCTGTAG 58.453 55.000 0.00 0.00 0.00 2.74
1002 1003 1.546834 CCGACGAGTAAAGCTGTAGC 58.453 55.000 0.00 0.00 42.49 3.58
1003 1004 1.135489 CCGACGAGTAAAGCTGTAGCA 60.135 52.381 6.65 0.00 45.16 3.49
1004 1005 2.592194 CGACGAGTAAAGCTGTAGCAA 58.408 47.619 6.65 0.00 45.16 3.91
1005 1006 3.179830 CGACGAGTAAAGCTGTAGCAAT 58.820 45.455 6.65 0.00 45.16 3.56
1006 1007 3.612860 CGACGAGTAAAGCTGTAGCAATT 59.387 43.478 6.65 3.72 45.16 2.32
1007 1008 4.259451 CGACGAGTAAAGCTGTAGCAATTC 60.259 45.833 6.65 0.00 45.16 2.17
1008 1009 4.822026 ACGAGTAAAGCTGTAGCAATTCT 58.178 39.130 6.65 0.00 45.16 2.40
1009 1010 5.238583 ACGAGTAAAGCTGTAGCAATTCTT 58.761 37.500 6.65 0.00 45.16 2.52
1010 1011 5.120830 ACGAGTAAAGCTGTAGCAATTCTTG 59.879 40.000 6.65 5.93 45.16 3.02
1022 1023 3.360775 CAATTCTTGCGAGAGACGAAC 57.639 47.619 3.32 0.00 45.77 3.95
1023 1024 2.724977 ATTCTTGCGAGAGACGAACA 57.275 45.000 3.32 0.00 45.77 3.18
1024 1025 1.767289 TTCTTGCGAGAGACGAACAC 58.233 50.000 3.32 0.00 45.77 3.32
1025 1026 0.385598 TCTTGCGAGAGACGAACACG 60.386 55.000 0.00 0.00 45.77 4.49
1026 1027 0.385598 CTTGCGAGAGACGAACACGA 60.386 55.000 0.00 0.00 45.77 4.35
1027 1028 0.659417 TTGCGAGAGACGAACACGAC 60.659 55.000 0.00 0.00 45.77 4.34
1028 1029 1.082300 GCGAGAGACGAACACGACA 60.082 57.895 0.00 0.00 45.77 4.35
1042 1043 2.425668 ACACGACAAACTTTTCCCAAGG 59.574 45.455 0.00 0.00 0.00 3.61
1046 1047 3.633065 CGACAAACTTTTCCCAAGGGTTA 59.367 43.478 4.80 0.00 36.47 2.85
1053 1054 1.426751 TTCCCAAGGGTTAGACACGT 58.573 50.000 4.80 0.00 36.47 4.49
1056 1057 1.206371 CCCAAGGGTTAGACACGTAGG 59.794 57.143 0.00 0.00 0.00 3.18
1071 1072 1.019805 GTAGGCTTCCGTGTCAAGGC 61.020 60.000 0.00 0.00 44.76 4.35
1074 1075 2.328099 GCTTCCGTGTCAAGGCTGG 61.328 63.158 0.00 0.00 0.00 4.85
1089 1090 4.308458 TGGTCACGCCCTTCCACG 62.308 66.667 0.00 0.00 36.04 4.94
1164 1165 1.094785 CACGCCACCAGAAATAAGGG 58.905 55.000 0.00 0.00 0.00 3.95
1201 1202 2.110578 CCCCAATTCAGATTCCCCAAC 58.889 52.381 0.00 0.00 0.00 3.77
1435 1453 3.960237 TGCGTCGGCAGGTAAAAG 58.040 55.556 0.00 0.00 46.21 2.27
1446 1464 1.077930 GGTAAAAGTCCCGGCTCCC 60.078 63.158 0.00 0.00 0.00 4.30
1448 1466 3.319441 TAAAAGTCCCGGCTCCCGC 62.319 63.158 0.00 0.00 46.86 6.13
1570 1588 1.398390 GTAGTGCTTTCCTGGAATGCG 59.602 52.381 30.37 16.00 42.88 4.73
1615 1633 2.852075 TCCCGGTTTGAGGTGCCT 60.852 61.111 0.00 0.00 0.00 4.75
1616 1634 2.115266 CCCGGTTTGAGGTGCCTT 59.885 61.111 0.00 0.00 0.00 4.35
1687 1706 2.295909 ACCGATTGTTTTGGTCATGTGG 59.704 45.455 0.00 0.00 37.60 4.17
1718 1740 7.921214 GGATGAGTGAAAATGACGAGTAATCTA 59.079 37.037 0.00 0.00 0.00 1.98
1721 1743 9.731819 TGAGTGAAAATGACGAGTAATCTATAC 57.268 33.333 0.00 0.00 0.00 1.47
1723 1745 9.737427 AGTGAAAATGACGAGTAATCTATACAG 57.263 33.333 0.00 0.00 0.00 2.74
1746 1769 7.023575 CAGAACAATTATTTCTTCGGGTTCAG 58.976 38.462 0.00 0.00 36.69 3.02
1756 1779 2.406616 CGGGTTCAGAATTGGGCCG 61.407 63.158 0.00 0.00 0.00 6.13
1763 1786 2.374184 TCAGAATTGGGCCGTTAATGG 58.626 47.619 9.55 9.55 0.00 3.16
1848 1872 3.123804 CTCTGTTGTTAGCGTCTTGTGT 58.876 45.455 0.00 0.00 0.00 3.72
1858 1882 1.525619 GCGTCTTGTGTTGTACCTGTC 59.474 52.381 0.00 0.00 0.00 3.51
1876 1900 4.631377 CCTGTCGATTTACAGCTTTGATGA 59.369 41.667 0.00 0.00 44.56 2.92
1905 1929 7.079182 ACAGTTCGAAAGTAAAATTGTGTGA 57.921 32.000 0.00 0.00 0.00 3.58
1937 1978 7.847096 TGTATGGTTGATACACTTGTCTGTAT 58.153 34.615 0.00 0.00 41.75 2.29
1972 2013 6.042781 TGTTCATTCTTGGTAGACTTGTAGGT 59.957 38.462 0.00 0.00 0.00 3.08
1973 2014 7.233962 TGTTCATTCTTGGTAGACTTGTAGGTA 59.766 37.037 0.00 0.00 0.00 3.08
1981 2022 3.851976 AGACTTGTAGGTAGTTGAGCG 57.148 47.619 0.00 0.00 0.00 5.03
2071 2112 2.564771 CTTGTCAGTTGAGGAACAGCA 58.435 47.619 0.00 0.00 34.17 4.41
2074 2115 2.682856 TGTCAGTTGAGGAACAGCAAAC 59.317 45.455 0.00 0.00 34.17 2.93
2075 2116 2.682856 GTCAGTTGAGGAACAGCAAACA 59.317 45.455 0.00 0.00 34.17 2.83
2076 2117 2.945008 TCAGTTGAGGAACAGCAAACAG 59.055 45.455 0.00 0.00 34.17 3.16
2077 2118 2.945008 CAGTTGAGGAACAGCAAACAGA 59.055 45.455 0.00 0.00 34.17 3.41
2078 2119 3.003068 CAGTTGAGGAACAGCAAACAGAG 59.997 47.826 0.00 0.00 34.17 3.35
2119 2164 5.771469 CACATTGTTATGATGTGGTGTGTT 58.229 37.500 8.87 0.00 46.62 3.32
2191 2236 9.868277 TTATCAATGGAAATACAAATGTGGAAC 57.132 29.630 0.00 0.00 37.35 3.62
2192 2237 6.696411 TCAATGGAAATACAAATGTGGAACC 58.304 36.000 0.00 0.00 34.36 3.62
2197 2242 4.981806 AATACAAATGTGGAACCCATCG 57.018 40.909 0.00 0.00 35.28 3.84
2204 2249 2.442413 TGTGGAACCCATCGGAAATTC 58.558 47.619 0.00 0.00 35.28 2.17
2209 2254 4.101274 TGGAACCCATCGGAAATTCGTATA 59.899 41.667 0.00 0.00 0.00 1.47
2215 2260 6.037830 ACCCATCGGAAATTCGTATAAACTTG 59.962 38.462 0.00 0.00 0.00 3.16
2216 2261 5.907391 CCATCGGAAATTCGTATAAACTTGC 59.093 40.000 0.00 0.00 0.00 4.01
2240 2287 3.502191 TTTGTCAACTTCCTTGCACAC 57.498 42.857 0.00 0.00 0.00 3.82
2294 2343 3.939740 TCATGAATTCCCCTTCCTCAG 57.060 47.619 2.27 0.00 0.00 3.35
2348 2405 4.637534 ACAGAATACTGCATCATGTCCAAC 59.362 41.667 0.00 0.00 46.95 3.77
2359 2416 3.653164 TCATGTCCAACTAGGCTGGATA 58.347 45.455 16.43 14.59 44.69 2.59
2437 2494 4.009675 TGTGCTTTATTCCTACTTGGCTG 58.990 43.478 0.00 0.00 35.26 4.85
2449 2506 6.349300 TCCTACTTGGCTGATCTGAATTAAC 58.651 40.000 3.42 0.00 35.26 2.01
2749 2806 1.544982 CCTGCAGAGAGGCATATTGGG 60.545 57.143 17.39 0.00 43.97 4.12
2809 2866 4.058817 CAGAATTCGGTAGCCAGATAACC 58.941 47.826 0.00 0.00 0.00 2.85
2857 2920 2.034687 GCCTTGGAGCTGAAGCCA 59.965 61.111 0.00 0.00 43.38 4.75
2872 2935 3.206150 GAAGCCAGAGAAGTGTGTTTCA 58.794 45.455 0.00 0.00 0.00 2.69
2933 2996 9.613428 TGAACTCTTCATTATGGTTGTAATAGG 57.387 33.333 0.00 0.00 34.08 2.57
3067 3130 7.611079 ACATTTTAATTTGGGATGGAATTGTGG 59.389 33.333 0.00 0.00 0.00 4.17
3120 3188 7.624549 CCTATCATATAACCAGGTATTGCAGT 58.375 38.462 0.00 0.00 0.00 4.40
3158 3226 1.336240 GGGCTGAACAGTTGCAACATC 60.336 52.381 30.11 23.15 0.00 3.06
3176 3244 7.496920 TGCAACATCGATAAATCTGAAGATCTT 59.503 33.333 7.95 7.95 32.75 2.40
3411 3483 1.066573 CAGTTCGGCAATGGAGAGAGT 60.067 52.381 0.00 0.00 0.00 3.24
3590 3667 1.625818 AGCGGATTGTCAGAAGAGGTT 59.374 47.619 0.00 0.00 0.00 3.50
3635 3713 2.507484 TGAGCATTTTGTCCAGTCCAG 58.493 47.619 0.00 0.00 0.00 3.86
3643 3721 6.694447 CATTTTGTCCAGTCCAGAATGAATT 58.306 36.000 0.00 0.00 39.69 2.17
3648 3726 5.013079 TGTCCAGTCCAGAATGAATTAGTGT 59.987 40.000 0.00 0.00 39.69 3.55
3743 3821 1.053264 CCTGCTCCTCTGCATACCCT 61.053 60.000 0.00 0.00 42.48 4.34
3899 3997 8.093307 ACATGCACAAAATGTCATAACCATAAA 58.907 29.630 0.00 0.00 32.83 1.40
3900 3998 9.100554 CATGCACAAAATGTCATAACCATAAAT 57.899 29.630 0.00 0.00 0.00 1.40
3902 4000 9.579768 TGCACAAAATGTCATAACCATAAATAC 57.420 29.630 0.00 0.00 0.00 1.89
3903 4001 9.579768 GCACAAAATGTCATAACCATAAATACA 57.420 29.630 0.00 0.00 0.00 2.29
3916 4014 7.938140 ACCATAAATACATTACTGTGCTGTT 57.062 32.000 0.00 0.00 36.79 3.16
4017 4116 2.768253 ACTGAATTCACAGATCGGCA 57.232 45.000 3.38 0.00 40.63 5.69
4029 4133 4.753610 CACAGATCGGCAATTCATGATACT 59.246 41.667 0.00 0.00 0.00 2.12
4030 4134 5.928264 CACAGATCGGCAATTCATGATACTA 59.072 40.000 0.00 0.00 0.00 1.82
4031 4135 5.928839 ACAGATCGGCAATTCATGATACTAC 59.071 40.000 0.00 0.00 0.00 2.73
4040 4144 6.454848 GCAATTCATGATACTACATCGCTAGC 60.455 42.308 4.06 4.06 0.00 3.42
4055 4159 2.029828 CGCTAGCTGGATAGGGTGTAAG 60.030 54.545 13.93 0.00 32.57 2.34
4086 4191 3.376540 CTTCAGCTCTAGTACAATCGCC 58.623 50.000 0.00 0.00 0.00 5.54
4125 4236 5.466393 CGGAGCAATTTCATTTCCAAAACTT 59.534 36.000 0.00 0.00 0.00 2.66
4153 4264 1.178276 GAGGAGACGAGAGCAAGGAA 58.822 55.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.658757 AATGCAACCGCTGTATTTGTT 57.341 38.095 0.00 0.00 37.05 2.83
1 2 3.658757 AAATGCAACCGCTGTATTTGT 57.341 38.095 9.78 0.00 45.35 2.83
2 3 5.861251 TCTTTAAATGCAACCGCTGTATTTG 59.139 36.000 16.57 5.83 46.18 2.32
4 5 5.637006 TCTTTAAATGCAACCGCTGTATT 57.363 34.783 0.00 0.00 41.59 1.89
5 6 5.637006 TTCTTTAAATGCAACCGCTGTAT 57.363 34.783 0.00 0.00 39.64 2.29
6 7 5.216648 GTTTCTTTAAATGCAACCGCTGTA 58.783 37.500 0.00 0.00 39.64 2.74
7 8 4.048504 GTTTCTTTAAATGCAACCGCTGT 58.951 39.130 0.00 0.00 39.64 4.40
8 9 3.119463 CGTTTCTTTAAATGCAACCGCTG 59.881 43.478 0.00 0.00 39.64 5.18
9 10 3.305110 CGTTTCTTTAAATGCAACCGCT 58.695 40.909 0.00 0.00 39.64 5.52
10 11 3.681424 CGTTTCTTTAAATGCAACCGC 57.319 42.857 0.00 0.00 39.24 5.68
49 50 9.786105 CTTTGTTGCAAAATTAACCATTTCTTT 57.214 25.926 0.00 0.00 33.60 2.52
50 51 7.914871 GCTTTGTTGCAAAATTAACCATTTCTT 59.085 29.630 0.00 0.00 33.60 2.52
51 52 7.066766 TGCTTTGTTGCAAAATTAACCATTTCT 59.933 29.630 0.00 0.00 40.29 2.52
52 53 7.192232 TGCTTTGTTGCAAAATTAACCATTTC 58.808 30.769 0.00 0.00 40.29 2.17
53 54 7.093322 TGCTTTGTTGCAAAATTAACCATTT 57.907 28.000 0.00 0.00 40.29 2.32
54 55 6.690194 TGCTTTGTTGCAAAATTAACCATT 57.310 29.167 0.00 0.00 40.29 3.16
66 67 4.679197 GTCGATTGTATTTGCTTTGTTGCA 59.321 37.500 0.00 0.00 41.65 4.08
67 68 4.917415 AGTCGATTGTATTTGCTTTGTTGC 59.083 37.500 0.00 0.00 0.00 4.17
68 69 6.991485 AAGTCGATTGTATTTGCTTTGTTG 57.009 33.333 0.00 0.00 0.00 3.33
69 70 9.128107 CAATAAGTCGATTGTATTTGCTTTGTT 57.872 29.630 0.00 0.00 33.01 2.83
70 71 7.273381 GCAATAAGTCGATTGTATTTGCTTTGT 59.727 33.333 11.18 0.00 38.77 2.83
71 72 7.273164 TGCAATAAGTCGATTGTATTTGCTTTG 59.727 33.333 16.26 0.00 38.77 2.77
72 73 7.273381 GTGCAATAAGTCGATTGTATTTGCTTT 59.727 33.333 16.26 0.00 38.77 3.51
73 74 6.747280 GTGCAATAAGTCGATTGTATTTGCTT 59.253 34.615 16.26 4.16 38.77 3.91
74 75 6.258160 GTGCAATAAGTCGATTGTATTTGCT 58.742 36.000 16.26 0.00 38.77 3.91
75 76 5.455525 GGTGCAATAAGTCGATTGTATTTGC 59.544 40.000 11.41 11.41 38.77 3.68
76 77 6.550843 TGGTGCAATAAGTCGATTGTATTTG 58.449 36.000 0.00 0.00 38.77 2.32
77 78 6.751514 TGGTGCAATAAGTCGATTGTATTT 57.248 33.333 0.00 0.00 38.77 1.40
78 79 6.751514 TTGGTGCAATAAGTCGATTGTATT 57.248 33.333 0.00 0.00 38.77 1.89
79 80 6.751514 TTTGGTGCAATAAGTCGATTGTAT 57.248 33.333 0.00 0.00 38.77 2.29
80 81 6.428465 TCTTTTGGTGCAATAAGTCGATTGTA 59.572 34.615 0.00 0.00 38.77 2.41
81 82 5.240623 TCTTTTGGTGCAATAAGTCGATTGT 59.759 36.000 0.00 0.00 38.77 2.71
82 83 5.698832 TCTTTTGGTGCAATAAGTCGATTG 58.301 37.500 0.00 0.00 39.41 2.67
83 84 5.957842 TCTTTTGGTGCAATAAGTCGATT 57.042 34.783 0.00 0.00 0.00 3.34
84 85 5.240623 TGTTCTTTTGGTGCAATAAGTCGAT 59.759 36.000 0.00 0.00 0.00 3.59
85 86 4.576873 TGTTCTTTTGGTGCAATAAGTCGA 59.423 37.500 0.00 0.00 0.00 4.20
86 87 4.854399 TGTTCTTTTGGTGCAATAAGTCG 58.146 39.130 0.00 0.00 0.00 4.18
87 88 6.922957 TCATTGTTCTTTTGGTGCAATAAGTC 59.077 34.615 0.00 0.00 0.00 3.01
88 89 6.815089 TCATTGTTCTTTTGGTGCAATAAGT 58.185 32.000 0.00 0.00 0.00 2.24
89 90 7.712264 TTCATTGTTCTTTTGGTGCAATAAG 57.288 32.000 0.00 0.00 0.00 1.73
90 91 7.930325 TGATTCATTGTTCTTTTGGTGCAATAA 59.070 29.630 0.00 0.00 0.00 1.40
91 92 7.440198 TGATTCATTGTTCTTTTGGTGCAATA 58.560 30.769 0.00 0.00 0.00 1.90
92 93 6.289834 TGATTCATTGTTCTTTTGGTGCAAT 58.710 32.000 0.00 0.00 0.00 3.56
93 94 5.668471 TGATTCATTGTTCTTTTGGTGCAA 58.332 33.333 0.00 0.00 0.00 4.08
94 95 5.273674 TGATTCATTGTTCTTTTGGTGCA 57.726 34.783 0.00 0.00 0.00 4.57
95 96 5.754890 AGTTGATTCATTGTTCTTTTGGTGC 59.245 36.000 0.00 0.00 0.00 5.01
96 97 8.870160 TTAGTTGATTCATTGTTCTTTTGGTG 57.130 30.769 0.00 0.00 0.00 4.17
97 98 9.533253 CTTTAGTTGATTCATTGTTCTTTTGGT 57.467 29.630 0.00 0.00 0.00 3.67
98 99 8.490355 GCTTTAGTTGATTCATTGTTCTTTTGG 58.510 33.333 0.00 0.00 0.00 3.28
99 100 8.209869 CGCTTTAGTTGATTCATTGTTCTTTTG 58.790 33.333 0.00 0.00 0.00 2.44
100 101 7.920682 ACGCTTTAGTTGATTCATTGTTCTTTT 59.079 29.630 0.00 0.00 0.00 2.27
101 102 7.425606 ACGCTTTAGTTGATTCATTGTTCTTT 58.574 30.769 0.00 0.00 0.00 2.52
102 103 6.970484 ACGCTTTAGTTGATTCATTGTTCTT 58.030 32.000 0.00 0.00 0.00 2.52
103 104 6.560253 ACGCTTTAGTTGATTCATTGTTCT 57.440 33.333 0.00 0.00 0.00 3.01
104 105 8.895932 AATACGCTTTAGTTGATTCATTGTTC 57.104 30.769 0.00 0.00 0.00 3.18
105 106 7.692291 CGAATACGCTTTAGTTGATTCATTGTT 59.308 33.333 0.00 0.00 0.00 2.83
106 107 7.148474 ACGAATACGCTTTAGTTGATTCATTGT 60.148 33.333 0.00 0.00 43.96 2.71
107 108 7.180079 ACGAATACGCTTTAGTTGATTCATTG 58.820 34.615 0.00 0.00 43.96 2.82
108 109 7.064134 TGACGAATACGCTTTAGTTGATTCATT 59.936 33.333 0.00 0.00 43.96 2.57
109 110 6.533723 TGACGAATACGCTTTAGTTGATTCAT 59.466 34.615 0.00 0.00 43.96 2.57
110 111 5.865013 TGACGAATACGCTTTAGTTGATTCA 59.135 36.000 0.00 0.00 43.96 2.57
111 112 6.327177 TGACGAATACGCTTTAGTTGATTC 57.673 37.500 0.00 0.00 43.96 2.52
112 113 6.705782 CATGACGAATACGCTTTAGTTGATT 58.294 36.000 0.00 0.00 43.96 2.57
113 114 5.276868 GCATGACGAATACGCTTTAGTTGAT 60.277 40.000 0.00 0.00 43.96 2.57
114 115 4.032445 GCATGACGAATACGCTTTAGTTGA 59.968 41.667 0.00 0.00 43.96 3.18
115 116 4.201676 TGCATGACGAATACGCTTTAGTTG 60.202 41.667 0.00 0.00 43.96 3.16
116 117 3.930229 TGCATGACGAATACGCTTTAGTT 59.070 39.130 0.00 0.00 43.96 2.24
117 118 3.517602 TGCATGACGAATACGCTTTAGT 58.482 40.909 0.00 0.00 43.96 2.24
118 119 4.514545 TTGCATGACGAATACGCTTTAG 57.485 40.909 0.00 0.00 43.96 1.85
119 120 4.930463 TTTGCATGACGAATACGCTTTA 57.070 36.364 0.00 0.00 43.96 1.85
120 121 3.822594 TTTGCATGACGAATACGCTTT 57.177 38.095 0.00 0.00 43.96 3.51
121 122 3.822594 TTTTGCATGACGAATACGCTT 57.177 38.095 0.00 0.00 43.96 4.68
122 123 3.822594 TTTTTGCATGACGAATACGCT 57.177 38.095 0.00 0.00 43.96 5.07
139 140 9.826574 GAAAATGGTTACCCTTTAGTTCTTTTT 57.173 29.630 5.14 0.00 0.00 1.94
140 141 9.209048 AGAAAATGGTTACCCTTTAGTTCTTTT 57.791 29.630 5.14 0.00 28.12 2.27
141 142 8.638873 CAGAAAATGGTTACCCTTTAGTTCTTT 58.361 33.333 5.14 0.00 29.25 2.52
142 143 7.255836 GCAGAAAATGGTTACCCTTTAGTTCTT 60.256 37.037 5.14 0.00 29.25 2.52
143 144 6.208797 GCAGAAAATGGTTACCCTTTAGTTCT 59.791 38.462 5.14 2.78 30.66 3.01
144 145 6.208797 AGCAGAAAATGGTTACCCTTTAGTTC 59.791 38.462 5.14 0.66 35.67 3.01
145 146 6.075315 AGCAGAAAATGGTTACCCTTTAGTT 58.925 36.000 5.14 0.00 35.67 2.24
146 147 5.641155 AGCAGAAAATGGTTACCCTTTAGT 58.359 37.500 5.14 0.00 35.67 2.24
147 148 7.881775 ATAGCAGAAAATGGTTACCCTTTAG 57.118 36.000 5.14 1.21 40.89 1.85
148 149 8.658840 AAATAGCAGAAAATGGTTACCCTTTA 57.341 30.769 5.14 0.00 40.89 1.85
149 150 7.553504 AAATAGCAGAAAATGGTTACCCTTT 57.446 32.000 0.00 0.00 40.89 3.11
150 151 7.454694 AGAAAATAGCAGAAAATGGTTACCCTT 59.545 33.333 0.00 0.00 40.89 3.95
151 152 6.954102 AGAAAATAGCAGAAAATGGTTACCCT 59.046 34.615 0.00 0.00 40.89 4.34
152 153 7.035612 CAGAAAATAGCAGAAAATGGTTACCC 58.964 38.462 0.00 0.00 40.89 3.69
153 154 7.755373 GTCAGAAAATAGCAGAAAATGGTTACC 59.245 37.037 0.00 0.00 40.89 2.85
154 155 7.755373 GGTCAGAAAATAGCAGAAAATGGTTAC 59.245 37.037 0.00 0.00 40.89 2.50
155 156 7.361713 CGGTCAGAAAATAGCAGAAAATGGTTA 60.362 37.037 0.00 0.00 40.89 2.85
156 157 6.570378 CGGTCAGAAAATAGCAGAAAATGGTT 60.570 38.462 0.00 0.00 40.89 3.67
157 158 5.106157 CGGTCAGAAAATAGCAGAAAATGGT 60.106 40.000 0.00 0.00 43.56 3.55
158 159 5.106157 ACGGTCAGAAAATAGCAGAAAATGG 60.106 40.000 0.00 0.00 0.00 3.16
159 160 5.942872 ACGGTCAGAAAATAGCAGAAAATG 58.057 37.500 0.00 0.00 0.00 2.32
160 161 6.183360 GCTACGGTCAGAAAATAGCAGAAAAT 60.183 38.462 0.00 0.00 38.49 1.82
161 162 5.121768 GCTACGGTCAGAAAATAGCAGAAAA 59.878 40.000 0.00 0.00 38.49 2.29
162 163 4.630069 GCTACGGTCAGAAAATAGCAGAAA 59.370 41.667 0.00 0.00 38.49 2.52
163 164 4.181578 GCTACGGTCAGAAAATAGCAGAA 58.818 43.478 0.00 0.00 38.49 3.02
164 165 3.733988 CGCTACGGTCAGAAAATAGCAGA 60.734 47.826 0.00 0.00 38.53 4.26
165 166 2.535984 CGCTACGGTCAGAAAATAGCAG 59.464 50.000 0.00 0.00 38.53 4.24
166 167 2.164827 TCGCTACGGTCAGAAAATAGCA 59.835 45.455 0.00 0.00 38.53 3.49
167 168 2.805845 TCGCTACGGTCAGAAAATAGC 58.194 47.619 0.00 0.00 35.87 2.97
168 169 5.968387 AATTCGCTACGGTCAGAAAATAG 57.032 39.130 0.00 0.00 0.00 1.73
169 170 8.428186 AAATAATTCGCTACGGTCAGAAAATA 57.572 30.769 0.00 0.00 0.00 1.40
170 171 6.920569 AATAATTCGCTACGGTCAGAAAAT 57.079 33.333 0.00 0.00 0.00 1.82
171 172 6.730960 AAATAATTCGCTACGGTCAGAAAA 57.269 33.333 0.00 0.00 0.00 2.29
172 173 6.148150 ACAAAATAATTCGCTACGGTCAGAAA 59.852 34.615 0.00 0.00 0.00 2.52
173 174 5.640357 ACAAAATAATTCGCTACGGTCAGAA 59.360 36.000 0.00 0.00 0.00 3.02
174 175 5.172934 ACAAAATAATTCGCTACGGTCAGA 58.827 37.500 0.00 0.00 0.00 3.27
175 176 5.464965 ACAAAATAATTCGCTACGGTCAG 57.535 39.130 0.00 0.00 0.00 3.51
176 177 5.866335 AACAAAATAATTCGCTACGGTCA 57.134 34.783 0.00 0.00 0.00 4.02
177 178 6.797995 TGAAAACAAAATAATTCGCTACGGTC 59.202 34.615 0.00 0.00 0.00 4.79
178 179 6.670233 TGAAAACAAAATAATTCGCTACGGT 58.330 32.000 0.00 0.00 0.00 4.83
179 180 6.799925 ACTGAAAACAAAATAATTCGCTACGG 59.200 34.615 0.00 0.00 0.00 4.02
180 181 7.775729 ACTGAAAACAAAATAATTCGCTACG 57.224 32.000 0.00 0.00 0.00 3.51
181 182 8.786028 GCTACTGAAAACAAAATAATTCGCTAC 58.214 33.333 0.00 0.00 0.00 3.58
182 183 8.508062 TGCTACTGAAAACAAAATAATTCGCTA 58.492 29.630 0.00 0.00 0.00 4.26
183 184 7.367285 TGCTACTGAAAACAAAATAATTCGCT 58.633 30.769 0.00 0.00 0.00 4.93
184 185 7.561237 TGCTACTGAAAACAAAATAATTCGC 57.439 32.000 0.00 0.00 0.00 4.70
185 186 8.638565 CCTTGCTACTGAAAACAAAATAATTCG 58.361 33.333 0.00 0.00 0.00 3.34
186 187 9.691362 TCCTTGCTACTGAAAACAAAATAATTC 57.309 29.630 0.00 0.00 0.00 2.17
191 192 8.962884 AATTTCCTTGCTACTGAAAACAAAAT 57.037 26.923 0.00 0.00 32.29 1.82
192 193 9.877178 TTAATTTCCTTGCTACTGAAAACAAAA 57.123 25.926 0.00 0.00 32.29 2.44
193 194 9.308318 GTTAATTTCCTTGCTACTGAAAACAAA 57.692 29.630 0.00 0.00 32.29 2.83
194 195 8.691797 AGTTAATTTCCTTGCTACTGAAAACAA 58.308 29.630 0.00 0.00 32.29 2.83
195 196 8.232913 AGTTAATTTCCTTGCTACTGAAAACA 57.767 30.769 0.00 0.00 32.29 2.83
196 197 7.534239 CGAGTTAATTTCCTTGCTACTGAAAAC 59.466 37.037 0.00 0.00 32.29 2.43
197 198 7.442969 TCGAGTTAATTTCCTTGCTACTGAAAA 59.557 33.333 0.00 0.00 32.29 2.29
198 199 6.932400 TCGAGTTAATTTCCTTGCTACTGAAA 59.068 34.615 0.00 0.00 33.00 2.69
199 200 6.460781 TCGAGTTAATTTCCTTGCTACTGAA 58.539 36.000 0.00 0.00 0.00 3.02
200 201 6.032956 TCGAGTTAATTTCCTTGCTACTGA 57.967 37.500 0.00 0.00 0.00 3.41
201 202 5.292101 CCTCGAGTTAATTTCCTTGCTACTG 59.708 44.000 12.31 0.00 0.00 2.74
202 203 5.420409 CCTCGAGTTAATTTCCTTGCTACT 58.580 41.667 12.31 0.00 0.00 2.57
203 204 4.571176 CCCTCGAGTTAATTTCCTTGCTAC 59.429 45.833 12.31 0.00 0.00 3.58
204 205 4.468510 TCCCTCGAGTTAATTTCCTTGCTA 59.531 41.667 12.31 0.00 0.00 3.49
205 206 3.263425 TCCCTCGAGTTAATTTCCTTGCT 59.737 43.478 12.31 0.00 0.00 3.91
206 207 3.374367 GTCCCTCGAGTTAATTTCCTTGC 59.626 47.826 12.31 0.00 0.00 4.01
207 208 3.939592 GGTCCCTCGAGTTAATTTCCTTG 59.060 47.826 12.31 0.00 0.00 3.61
208 209 3.585732 TGGTCCCTCGAGTTAATTTCCTT 59.414 43.478 12.31 0.00 0.00 3.36
209 210 3.178865 TGGTCCCTCGAGTTAATTTCCT 58.821 45.455 12.31 0.00 0.00 3.36
210 211 3.622166 TGGTCCCTCGAGTTAATTTCC 57.378 47.619 12.31 4.65 0.00 3.13
211 212 6.510879 AATTTGGTCCCTCGAGTTAATTTC 57.489 37.500 12.31 0.00 0.00 2.17
212 213 6.911250 AAATTTGGTCCCTCGAGTTAATTT 57.089 33.333 12.31 10.11 0.00 1.82
213 214 6.295067 CCAAAATTTGGTCCCTCGAGTTAATT 60.295 38.462 16.24 5.05 45.93 1.40
214 215 5.185056 CCAAAATTTGGTCCCTCGAGTTAAT 59.815 40.000 16.24 0.00 45.93 1.40
215 216 4.521256 CCAAAATTTGGTCCCTCGAGTTAA 59.479 41.667 16.24 0.00 45.93 2.01
216 217 4.076394 CCAAAATTTGGTCCCTCGAGTTA 58.924 43.478 16.24 0.00 45.93 2.24
217 218 2.890945 CCAAAATTTGGTCCCTCGAGTT 59.109 45.455 16.24 0.00 45.93 3.01
218 219 2.514803 CCAAAATTTGGTCCCTCGAGT 58.485 47.619 16.24 0.00 45.93 4.18
274 275 9.875708 ACCTACCAAATATGCCTATTTATTGAA 57.124 29.630 6.66 0.00 35.77 2.69
275 276 9.875708 AACCTACCAAATATGCCTATTTATTGA 57.124 29.630 6.66 0.00 35.77 2.57
310 311 9.230122 TGTCTAGCTTTTGATGATAAATTGTGA 57.770 29.630 0.00 0.00 0.00 3.58
311 312 9.282247 GTGTCTAGCTTTTGATGATAAATTGTG 57.718 33.333 0.00 0.00 0.00 3.33
312 313 8.177663 CGTGTCTAGCTTTTGATGATAAATTGT 58.822 33.333 0.00 0.00 0.00 2.71
313 314 7.641411 CCGTGTCTAGCTTTTGATGATAAATTG 59.359 37.037 0.00 0.00 0.00 2.32
314 315 7.552687 TCCGTGTCTAGCTTTTGATGATAAATT 59.447 33.333 0.00 0.00 0.00 1.82
315 316 7.047891 TCCGTGTCTAGCTTTTGATGATAAAT 58.952 34.615 0.00 0.00 0.00 1.40
316 317 6.403049 TCCGTGTCTAGCTTTTGATGATAAA 58.597 36.000 0.00 0.00 0.00 1.40
317 318 5.972935 TCCGTGTCTAGCTTTTGATGATAA 58.027 37.500 0.00 0.00 0.00 1.75
318 319 5.592104 TCCGTGTCTAGCTTTTGATGATA 57.408 39.130 0.00 0.00 0.00 2.15
319 320 4.471904 TCCGTGTCTAGCTTTTGATGAT 57.528 40.909 0.00 0.00 0.00 2.45
320 321 3.953712 TCCGTGTCTAGCTTTTGATGA 57.046 42.857 0.00 0.00 0.00 2.92
321 322 5.812642 ACTTATCCGTGTCTAGCTTTTGATG 59.187 40.000 0.00 0.00 0.00 3.07
322 323 5.978814 ACTTATCCGTGTCTAGCTTTTGAT 58.021 37.500 0.00 0.00 0.00 2.57
323 324 5.401531 ACTTATCCGTGTCTAGCTTTTGA 57.598 39.130 0.00 0.00 0.00 2.69
324 325 5.749109 CCTACTTATCCGTGTCTAGCTTTTG 59.251 44.000 0.00 0.00 0.00 2.44
325 326 5.421374 ACCTACTTATCCGTGTCTAGCTTTT 59.579 40.000 0.00 0.00 0.00 2.27
326 327 4.954826 ACCTACTTATCCGTGTCTAGCTTT 59.045 41.667 0.00 0.00 0.00 3.51
327 328 4.534797 ACCTACTTATCCGTGTCTAGCTT 58.465 43.478 0.00 0.00 0.00 3.74
328 329 4.167652 ACCTACTTATCCGTGTCTAGCT 57.832 45.455 0.00 0.00 0.00 3.32
329 330 5.762218 TCTTACCTACTTATCCGTGTCTAGC 59.238 44.000 0.00 0.00 0.00 3.42
330 331 7.982761 ATCTTACCTACTTATCCGTGTCTAG 57.017 40.000 0.00 0.00 0.00 2.43
331 332 9.851686 TTTATCTTACCTACTTATCCGTGTCTA 57.148 33.333 0.00 0.00 0.00 2.59
332 333 8.757982 TTTATCTTACCTACTTATCCGTGTCT 57.242 34.615 0.00 0.00 0.00 3.41
333 334 9.978044 AATTTATCTTACCTACTTATCCGTGTC 57.022 33.333 0.00 0.00 0.00 3.67
334 335 9.978044 GAATTTATCTTACCTACTTATCCGTGT 57.022 33.333 0.00 0.00 0.00 4.49
335 336 9.976511 TGAATTTATCTTACCTACTTATCCGTG 57.023 33.333 0.00 0.00 0.00 4.94
350 351 9.836864 GGGCCTAATGAATTTTGAATTTATCTT 57.163 29.630 0.84 0.00 0.00 2.40
351 352 8.991275 TGGGCCTAATGAATTTTGAATTTATCT 58.009 29.630 4.53 0.00 0.00 1.98
352 353 9.045223 GTGGGCCTAATGAATTTTGAATTTATC 57.955 33.333 4.53 0.00 0.00 1.75
353 354 8.771286 AGTGGGCCTAATGAATTTTGAATTTAT 58.229 29.630 4.53 0.00 0.00 1.40
354 355 8.040132 CAGTGGGCCTAATGAATTTTGAATTTA 58.960 33.333 11.60 0.00 0.00 1.40
355 356 6.880529 CAGTGGGCCTAATGAATTTTGAATTT 59.119 34.615 11.60 0.00 0.00 1.82
356 357 6.013466 ACAGTGGGCCTAATGAATTTTGAATT 60.013 34.615 24.15 0.00 0.00 2.17
357 358 5.484998 ACAGTGGGCCTAATGAATTTTGAAT 59.515 36.000 24.15 0.00 0.00 2.57
358 359 4.837860 ACAGTGGGCCTAATGAATTTTGAA 59.162 37.500 24.15 0.00 0.00 2.69
359 360 4.415596 ACAGTGGGCCTAATGAATTTTGA 58.584 39.130 24.15 0.00 0.00 2.69
360 361 4.806640 ACAGTGGGCCTAATGAATTTTG 57.193 40.909 24.15 0.00 0.00 2.44
361 362 5.105351 GCTAACAGTGGGCCTAATGAATTTT 60.105 40.000 24.15 9.33 0.00 1.82
362 363 4.402474 GCTAACAGTGGGCCTAATGAATTT 59.598 41.667 24.15 9.70 0.00 1.82
363 364 3.954258 GCTAACAGTGGGCCTAATGAATT 59.046 43.478 24.15 10.43 0.00 2.17
364 365 3.203040 AGCTAACAGTGGGCCTAATGAAT 59.797 43.478 24.15 13.44 0.00 2.57
365 366 2.576191 AGCTAACAGTGGGCCTAATGAA 59.424 45.455 24.15 9.64 0.00 2.57
366 367 2.196595 AGCTAACAGTGGGCCTAATGA 58.803 47.619 24.15 0.12 0.00 2.57
367 368 2.717639 AGCTAACAGTGGGCCTAATG 57.282 50.000 15.61 15.61 0.00 1.90
368 369 5.388599 AATAAGCTAACAGTGGGCCTAAT 57.611 39.130 4.53 0.00 0.00 1.73
369 370 4.855298 AATAAGCTAACAGTGGGCCTAA 57.145 40.909 4.53 0.00 0.00 2.69
370 371 4.855298 AAATAAGCTAACAGTGGGCCTA 57.145 40.909 4.53 0.00 0.00 3.93
371 372 3.739401 AAATAAGCTAACAGTGGGCCT 57.261 42.857 4.53 0.00 0.00 5.19
372 373 3.509967 ACAAAATAAGCTAACAGTGGGCC 59.490 43.478 0.00 0.00 0.00 5.80
373 374 4.783764 ACAAAATAAGCTAACAGTGGGC 57.216 40.909 0.00 0.00 0.00 5.36
374 375 6.265577 GCATACAAAATAAGCTAACAGTGGG 58.734 40.000 0.00 0.00 0.00 4.61
375 376 6.095440 AGGCATACAAAATAAGCTAACAGTGG 59.905 38.462 0.00 0.00 0.00 4.00
376 377 7.066284 AGAGGCATACAAAATAAGCTAACAGTG 59.934 37.037 0.00 0.00 0.00 3.66
377 378 7.066284 CAGAGGCATACAAAATAAGCTAACAGT 59.934 37.037 0.00 0.00 0.00 3.55
378 379 7.412853 CAGAGGCATACAAAATAAGCTAACAG 58.587 38.462 0.00 0.00 0.00 3.16
379 380 6.183360 GCAGAGGCATACAAAATAAGCTAACA 60.183 38.462 0.00 0.00 40.72 2.41
380 381 6.202226 GCAGAGGCATACAAAATAAGCTAAC 58.798 40.000 0.00 0.00 40.72 2.34
381 382 5.007626 CGCAGAGGCATACAAAATAAGCTAA 59.992 40.000 0.00 0.00 41.24 3.09
382 383 4.511454 CGCAGAGGCATACAAAATAAGCTA 59.489 41.667 0.00 0.00 41.24 3.32
383 384 3.313526 CGCAGAGGCATACAAAATAAGCT 59.686 43.478 0.00 0.00 41.24 3.74
384 385 3.621794 CGCAGAGGCATACAAAATAAGC 58.378 45.455 0.00 0.00 41.24 3.09
385 386 3.548818 GGCGCAGAGGCATACAAAATAAG 60.549 47.826 10.83 0.00 45.92 1.73
386 387 2.357637 GGCGCAGAGGCATACAAAATAA 59.642 45.455 10.83 0.00 45.92 1.40
387 388 1.946768 GGCGCAGAGGCATACAAAATA 59.053 47.619 10.83 0.00 45.92 1.40
388 389 0.740737 GGCGCAGAGGCATACAAAAT 59.259 50.000 10.83 0.00 45.92 1.82
389 390 2.179764 GGCGCAGAGGCATACAAAA 58.820 52.632 10.83 0.00 45.92 2.44
390 391 3.903783 GGCGCAGAGGCATACAAA 58.096 55.556 10.83 0.00 45.92 2.83
397 398 1.138247 CAGAAAATGGCGCAGAGGC 59.862 57.895 10.83 0.00 46.95 4.70
398 399 1.332997 GATCAGAAAATGGCGCAGAGG 59.667 52.381 10.83 0.00 0.00 3.69
399 400 2.286872 AGATCAGAAAATGGCGCAGAG 58.713 47.619 10.83 0.00 0.00 3.35
400 401 2.408271 AGATCAGAAAATGGCGCAGA 57.592 45.000 10.83 0.00 0.00 4.26
401 402 2.223433 GGAAGATCAGAAAATGGCGCAG 60.223 50.000 10.83 0.00 0.00 5.18
402 403 1.745087 GGAAGATCAGAAAATGGCGCA 59.255 47.619 10.83 0.00 0.00 6.09
403 404 1.745087 TGGAAGATCAGAAAATGGCGC 59.255 47.619 0.00 0.00 0.00 6.53
404 405 4.357142 CAATGGAAGATCAGAAAATGGCG 58.643 43.478 0.00 0.00 0.00 5.69
405 406 4.117685 GCAATGGAAGATCAGAAAATGGC 58.882 43.478 0.00 0.00 0.00 4.40
406 407 5.333299 TGCAATGGAAGATCAGAAAATGG 57.667 39.130 0.00 0.00 0.00 3.16
407 408 5.287752 CGTTGCAATGGAAGATCAGAAAATG 59.712 40.000 11.00 0.00 0.00 2.32
408 409 5.404946 CGTTGCAATGGAAGATCAGAAAAT 58.595 37.500 11.00 0.00 0.00 1.82
409 410 4.797471 CGTTGCAATGGAAGATCAGAAAA 58.203 39.130 11.00 0.00 0.00 2.29
410 411 3.366273 GCGTTGCAATGGAAGATCAGAAA 60.366 43.478 19.93 0.00 0.00 2.52
411 412 2.162208 GCGTTGCAATGGAAGATCAGAA 59.838 45.455 19.93 0.00 0.00 3.02
412 413 1.739466 GCGTTGCAATGGAAGATCAGA 59.261 47.619 19.93 0.00 0.00 3.27
413 414 1.469703 TGCGTTGCAATGGAAGATCAG 59.530 47.619 19.93 0.00 34.76 2.90
414 415 1.199789 GTGCGTTGCAATGGAAGATCA 59.800 47.619 19.93 5.62 41.47 2.92
415 416 1.791555 CGTGCGTTGCAATGGAAGATC 60.792 52.381 18.69 4.57 41.47 2.75
416 417 0.168788 CGTGCGTTGCAATGGAAGAT 59.831 50.000 18.69 0.00 41.47 2.40
417 418 1.573932 CGTGCGTTGCAATGGAAGA 59.426 52.632 18.69 0.00 41.47 2.87
418 419 1.442520 CCGTGCGTTGCAATGGAAG 60.443 57.895 19.93 18.38 41.47 3.46
419 420 2.123988 GACCGTGCGTTGCAATGGAA 62.124 55.000 19.93 0.00 41.47 3.53
420 421 2.593148 ACCGTGCGTTGCAATGGA 60.593 55.556 19.93 14.92 41.47 3.41
421 422 2.126888 GACCGTGCGTTGCAATGG 60.127 61.111 19.93 6.80 41.47 3.16
422 423 1.066656 CATGACCGTGCGTTGCAATG 61.067 55.000 14.54 14.54 41.47 2.82
423 424 1.209898 CATGACCGTGCGTTGCAAT 59.790 52.632 0.59 0.00 41.47 3.56
424 425 1.233950 ATCATGACCGTGCGTTGCAA 61.234 50.000 0.00 0.00 41.47 4.08
425 426 1.233950 AATCATGACCGTGCGTTGCA 61.234 50.000 0.00 0.00 35.60 4.08
426 427 0.724549 TAATCATGACCGTGCGTTGC 59.275 50.000 0.00 0.00 0.00 4.17
427 428 1.999735 AGTAATCATGACCGTGCGTTG 59.000 47.619 0.00 0.00 0.00 4.10
428 429 2.380084 AGTAATCATGACCGTGCGTT 57.620 45.000 0.00 0.00 0.00 4.84
429 430 3.513680 TTAGTAATCATGACCGTGCGT 57.486 42.857 0.00 0.00 0.00 5.24
430 431 4.979815 TGTATTAGTAATCATGACCGTGCG 59.020 41.667 0.00 0.00 0.00 5.34
431 432 6.479001 AGTTGTATTAGTAATCATGACCGTGC 59.521 38.462 0.00 0.00 0.00 5.34
432 433 9.524106 TTAGTTGTATTAGTAATCATGACCGTG 57.476 33.333 0.00 0.00 0.00 4.94
469 470 6.533639 TTAAGAGGGGGTCTTTAGGAAAAA 57.466 37.500 0.00 0.00 43.54 1.94
470 471 6.730001 ATTAAGAGGGGGTCTTTAGGAAAA 57.270 37.500 0.00 0.00 43.54 2.29
471 472 6.730001 AATTAAGAGGGGGTCTTTAGGAAA 57.270 37.500 0.00 0.00 43.54 3.13
472 473 6.970041 AGTAATTAAGAGGGGGTCTTTAGGAA 59.030 38.462 0.00 0.00 43.54 3.36
473 474 6.518534 AGTAATTAAGAGGGGGTCTTTAGGA 58.481 40.000 0.00 0.00 43.54 2.94
474 475 6.826632 AGTAATTAAGAGGGGGTCTTTAGG 57.173 41.667 0.00 0.00 43.54 2.69
475 476 8.326529 TGAAAGTAATTAAGAGGGGGTCTTTAG 58.673 37.037 0.00 0.00 43.54 1.85
476 477 8.105197 GTGAAAGTAATTAAGAGGGGGTCTTTA 58.895 37.037 0.00 0.00 43.54 1.85
477 478 6.946583 GTGAAAGTAATTAAGAGGGGGTCTTT 59.053 38.462 0.00 0.00 43.54 2.52
479 480 5.045066 GGTGAAAGTAATTAAGAGGGGGTCT 60.045 44.000 0.00 0.00 36.94 3.85
480 481 5.191426 GGTGAAAGTAATTAAGAGGGGGTC 58.809 45.833 0.00 0.00 0.00 4.46
481 482 4.604490 TGGTGAAAGTAATTAAGAGGGGGT 59.396 41.667 0.00 0.00 0.00 4.95
482 483 4.948004 GTGGTGAAAGTAATTAAGAGGGGG 59.052 45.833 0.00 0.00 0.00 5.40
483 484 5.414765 GTGTGGTGAAAGTAATTAAGAGGGG 59.585 44.000 0.00 0.00 0.00 4.79
484 485 6.238648 AGTGTGGTGAAAGTAATTAAGAGGG 58.761 40.000 0.00 0.00 0.00 4.30
485 486 6.090898 CGAGTGTGGTGAAAGTAATTAAGAGG 59.909 42.308 0.00 0.00 0.00 3.69
486 487 6.090898 CCGAGTGTGGTGAAAGTAATTAAGAG 59.909 42.308 0.00 0.00 0.00 2.85
487 488 5.929992 CCGAGTGTGGTGAAAGTAATTAAGA 59.070 40.000 0.00 0.00 0.00 2.10
488 489 5.390567 GCCGAGTGTGGTGAAAGTAATTAAG 60.391 44.000 0.00 0.00 0.00 1.85
489 490 4.453136 GCCGAGTGTGGTGAAAGTAATTAA 59.547 41.667 0.00 0.00 0.00 1.40
490 491 3.998341 GCCGAGTGTGGTGAAAGTAATTA 59.002 43.478 0.00 0.00 0.00 1.40
491 492 2.812011 GCCGAGTGTGGTGAAAGTAATT 59.188 45.455 0.00 0.00 0.00 1.40
492 493 2.423577 GCCGAGTGTGGTGAAAGTAAT 58.576 47.619 0.00 0.00 0.00 1.89
493 494 1.541670 GGCCGAGTGTGGTGAAAGTAA 60.542 52.381 0.00 0.00 0.00 2.24
494 495 0.034337 GGCCGAGTGTGGTGAAAGTA 59.966 55.000 0.00 0.00 0.00 2.24
495 496 1.227853 GGCCGAGTGTGGTGAAAGT 60.228 57.895 0.00 0.00 0.00 2.66
496 497 0.606401 ATGGCCGAGTGTGGTGAAAG 60.606 55.000 0.00 0.00 0.00 2.62
497 498 0.687920 TATGGCCGAGTGTGGTGAAA 59.312 50.000 0.00 0.00 0.00 2.69
498 499 0.036765 GTATGGCCGAGTGTGGTGAA 60.037 55.000 0.00 0.00 0.00 3.18
499 500 1.594833 GTATGGCCGAGTGTGGTGA 59.405 57.895 0.00 0.00 0.00 4.02
500 501 1.449601 GGTATGGCCGAGTGTGGTG 60.450 63.158 0.00 0.00 0.00 4.17
501 502 1.612442 AGGTATGGCCGAGTGTGGT 60.612 57.895 0.00 0.00 43.70 4.16
502 503 1.153369 CAGGTATGGCCGAGTGTGG 60.153 63.158 0.00 0.00 43.70 4.17
503 504 1.153369 CCAGGTATGGCCGAGTGTG 60.153 63.158 0.00 0.00 40.52 3.82
504 505 3.309582 CCAGGTATGGCCGAGTGT 58.690 61.111 0.00 0.00 40.52 3.55
554 555 1.002366 CAGACACGATTAGCACAGGC 58.998 55.000 0.00 0.00 41.61 4.85
555 556 1.645034 CCAGACACGATTAGCACAGG 58.355 55.000 0.00 0.00 0.00 4.00
556 557 1.002366 GCCAGACACGATTAGCACAG 58.998 55.000 0.00 0.00 0.00 3.66
557 558 0.391130 GGCCAGACACGATTAGCACA 60.391 55.000 0.00 0.00 0.00 4.57
558 559 1.090052 GGGCCAGACACGATTAGCAC 61.090 60.000 4.39 0.00 0.00 4.40
559 560 1.220749 GGGCCAGACACGATTAGCA 59.779 57.895 4.39 0.00 0.00 3.49
560 561 1.883084 CGGGCCAGACACGATTAGC 60.883 63.158 4.39 0.00 0.00 3.09
561 562 1.227263 CCGGGCCAGACACGATTAG 60.227 63.158 4.39 0.00 0.00 1.73
562 563 2.897207 CCGGGCCAGACACGATTA 59.103 61.111 4.39 0.00 0.00 1.75
563 564 4.778143 GCCGGGCCAGACACGATT 62.778 66.667 8.12 0.00 0.00 3.34
591 592 0.375803 CCGGCTATTAAACGTGCCAC 59.624 55.000 12.24 0.00 45.13 5.01
592 593 0.745128 CCCGGCTATTAAACGTGCCA 60.745 55.000 12.24 0.00 45.13 4.92
593 594 2.019337 CCCGGCTATTAAACGTGCC 58.981 57.895 0.00 2.35 41.76 5.01
594 595 1.354155 GCCCGGCTATTAAACGTGC 59.646 57.895 0.71 0.00 0.00 5.34
595 596 1.768112 CGGCCCGGCTATTAAACGTG 61.768 60.000 9.86 0.00 0.00 4.49
596 597 1.522130 CGGCCCGGCTATTAAACGT 60.522 57.895 9.86 0.00 0.00 3.99
597 598 1.522130 ACGGCCCGGCTATTAAACG 60.522 57.895 8.57 4.87 0.00 3.60
598 599 2.019337 CACGGCCCGGCTATTAAAC 58.981 57.895 8.57 0.00 0.00 2.01
599 600 1.820481 GCACGGCCCGGCTATTAAA 60.820 57.895 8.57 0.00 0.00 1.52
600 601 2.203098 GCACGGCCCGGCTATTAA 60.203 61.111 8.57 0.00 0.00 1.40
601 602 4.244463 GGCACGGCCCGGCTATTA 62.244 66.667 8.57 0.00 44.06 0.98
652 653 1.933853 CATTTACTAGTCAGGCCGTGC 59.066 52.381 0.00 0.00 0.00 5.34
653 654 2.550978 CCATTTACTAGTCAGGCCGTG 58.449 52.381 0.00 0.00 0.00 4.94
654 655 1.134491 GCCATTTACTAGTCAGGCCGT 60.134 52.381 13.78 0.00 36.17 5.68
655 656 1.583054 GCCATTTACTAGTCAGGCCG 58.417 55.000 13.78 0.00 36.17 6.13
657 658 1.810412 CGGGCCATTTACTAGTCAGGC 60.810 57.143 4.39 15.55 41.29 4.85
658 659 1.202651 CCGGGCCATTTACTAGTCAGG 60.203 57.143 4.39 0.00 0.00 3.86
659 660 1.810412 GCCGGGCCATTTACTAGTCAG 60.810 57.143 8.12 0.00 0.00 3.51
660 661 0.179468 GCCGGGCCATTTACTAGTCA 59.821 55.000 8.12 0.00 0.00 3.41
661 662 3.002277 GCCGGGCCATTTACTAGTC 57.998 57.895 8.12 0.00 0.00 2.59
679 680 2.900337 GCTAAACGGGCCATCGGG 60.900 66.667 4.39 0.00 37.18 5.14
680 681 2.124901 TGCTAAACGGGCCATCGG 60.125 61.111 4.39 0.00 0.00 4.18
681 682 3.098555 GTGCTAAACGGGCCATCG 58.901 61.111 4.39 1.48 0.00 3.84
690 691 1.081442 GCAGCCCAACGTGCTAAAC 60.081 57.895 0.00 0.00 36.81 2.01
691 692 0.893270 ATGCAGCCCAACGTGCTAAA 60.893 50.000 0.00 0.00 40.54 1.85
692 693 1.303236 ATGCAGCCCAACGTGCTAA 60.303 52.632 0.00 0.00 40.54 3.09
693 694 2.039974 CATGCAGCCCAACGTGCTA 61.040 57.895 0.00 0.00 40.54 3.49
694 695 3.367743 CATGCAGCCCAACGTGCT 61.368 61.111 0.00 0.00 40.54 4.40
695 696 2.697992 AAACATGCAGCCCAACGTGC 62.698 55.000 0.00 0.00 40.29 5.34
696 697 0.249405 AAAACATGCAGCCCAACGTG 60.249 50.000 0.00 0.00 0.00 4.49
697 698 0.031994 GAAAACATGCAGCCCAACGT 59.968 50.000 0.00 0.00 0.00 3.99
698 699 0.031857 TGAAAACATGCAGCCCAACG 59.968 50.000 0.00 0.00 0.00 4.10
699 700 2.237393 TTGAAAACATGCAGCCCAAC 57.763 45.000 0.00 0.00 0.00 3.77
716 717 0.829990 AAAACCAGCCCAACAGGTTG 59.170 50.000 5.19 5.19 46.70 3.77
718 719 2.316108 CTAAAAACCAGCCCAACAGGT 58.684 47.619 0.00 0.00 40.53 4.00
719 720 1.618343 CCTAAAAACCAGCCCAACAGG 59.382 52.381 0.00 0.00 39.47 4.00
720 721 1.000843 GCCTAAAAACCAGCCCAACAG 59.999 52.381 0.00 0.00 0.00 3.16
721 722 1.044611 GCCTAAAAACCAGCCCAACA 58.955 50.000 0.00 0.00 0.00 3.33
722 723 0.320374 GGCCTAAAAACCAGCCCAAC 59.680 55.000 0.00 0.00 39.60 3.77
723 724 2.753319 GGCCTAAAAACCAGCCCAA 58.247 52.632 0.00 0.00 39.60 4.12
724 725 4.531351 GGCCTAAAAACCAGCCCA 57.469 55.556 0.00 0.00 39.60 5.36
726 727 2.430694 CCAATAGGCCTAAAAACCAGCC 59.569 50.000 18.42 0.00 46.13 4.85
727 728 2.430694 CCCAATAGGCCTAAAAACCAGC 59.569 50.000 18.42 0.00 0.00 4.85
728 729 3.708451 ACCCAATAGGCCTAAAAACCAG 58.292 45.455 18.42 4.84 40.58 4.00
729 730 3.837399 ACCCAATAGGCCTAAAAACCA 57.163 42.857 18.42 0.00 40.58 3.67
730 731 8.486942 AAATATACCCAATAGGCCTAAAAACC 57.513 34.615 18.42 0.00 40.58 3.27
796 797 0.038067 GGCACGGCCGGTTTATTTTT 60.038 50.000 31.76 0.57 39.62 1.94
797 798 1.587568 GGCACGGCCGGTTTATTTT 59.412 52.632 31.76 1.49 39.62 1.82
798 799 3.280211 GGCACGGCCGGTTTATTT 58.720 55.556 31.76 2.42 39.62 1.40
958 959 1.956477 GTGTATAGCTGGCCAAATGGG 59.044 52.381 7.01 0.00 40.85 4.00
959 960 2.880890 GAGTGTATAGCTGGCCAAATGG 59.119 50.000 7.01 0.00 38.53 3.16
960 961 2.545526 CGAGTGTATAGCTGGCCAAATG 59.454 50.000 7.01 0.00 0.00 2.32
961 962 2.485479 CCGAGTGTATAGCTGGCCAAAT 60.485 50.000 7.01 3.30 0.00 2.32
962 963 1.134521 CCGAGTGTATAGCTGGCCAAA 60.135 52.381 7.01 0.00 0.00 3.28
963 964 0.464036 CCGAGTGTATAGCTGGCCAA 59.536 55.000 7.01 0.00 0.00 4.52
964 965 2.028125 GCCGAGTGTATAGCTGGCCA 62.028 60.000 4.71 4.71 36.51 5.36
965 966 1.301009 GCCGAGTGTATAGCTGGCC 60.301 63.158 0.00 0.00 36.51 5.36
966 967 1.301009 GGCCGAGTGTATAGCTGGC 60.301 63.158 0.00 0.00 41.72 4.85
967 968 1.007271 CGGCCGAGTGTATAGCTGG 60.007 63.158 24.07 0.00 0.00 4.85
968 969 0.317938 GTCGGCCGAGTGTATAGCTG 60.318 60.000 31.97 0.00 0.00 4.24
969 970 1.783031 CGTCGGCCGAGTGTATAGCT 61.783 60.000 31.97 0.00 39.56 3.32
970 971 1.370172 CGTCGGCCGAGTGTATAGC 60.370 63.158 31.97 13.45 39.56 2.97
971 972 2.314256 TCGTCGGCCGAGTGTATAG 58.686 57.895 31.97 13.73 41.60 1.31
972 973 4.538233 TCGTCGGCCGAGTGTATA 57.462 55.556 31.97 7.54 41.60 1.47
979 980 2.180017 GCTTTACTCGTCGGCCGA 59.820 61.111 27.28 27.28 45.00 5.54
980 981 2.158959 CAGCTTTACTCGTCGGCCG 61.159 63.158 22.12 22.12 38.13 6.13
981 982 0.171903 TACAGCTTTACTCGTCGGCC 59.828 55.000 0.00 0.00 0.00 6.13
982 983 1.546834 CTACAGCTTTACTCGTCGGC 58.453 55.000 0.00 0.00 0.00 5.54
983 984 1.135489 TGCTACAGCTTTACTCGTCGG 60.135 52.381 2.44 0.00 42.66 4.79
984 985 2.257974 TGCTACAGCTTTACTCGTCG 57.742 50.000 2.44 0.00 42.66 5.12
985 986 4.865365 AGAATTGCTACAGCTTTACTCGTC 59.135 41.667 2.44 0.00 42.66 4.20
986 987 4.822026 AGAATTGCTACAGCTTTACTCGT 58.178 39.130 2.44 0.00 42.66 4.18
987 988 5.554636 CAAGAATTGCTACAGCTTTACTCG 58.445 41.667 2.44 0.00 40.39 4.18
1003 1004 6.846013 TCGTGTTCGTCTCTCGCAAGAATT 62.846 45.833 0.00 0.00 41.68 2.17
1004 1005 5.446988 TCGTGTTCGTCTCTCGCAAGAAT 62.447 47.826 0.00 0.00 41.68 2.40
1005 1006 4.197764 TCGTGTTCGTCTCTCGCAAGAA 62.198 50.000 0.00 0.00 41.68 2.52
1006 1007 2.734095 TCGTGTTCGTCTCTCGCAAGA 61.734 52.381 0.00 0.00 40.63 3.02
1007 1008 0.385598 TCGTGTTCGTCTCTCGCAAG 60.386 55.000 0.00 0.00 39.67 4.01
1008 1009 0.659417 GTCGTGTTCGTCTCTCGCAA 60.659 55.000 0.00 0.00 39.67 4.85
1009 1010 1.082300 GTCGTGTTCGTCTCTCGCA 60.082 57.895 0.00 0.00 39.67 5.10
1010 1011 0.659417 TTGTCGTGTTCGTCTCTCGC 60.659 55.000 0.00 0.00 39.67 5.03
1011 1012 1.447201 GTTTGTCGTGTTCGTCTCTCG 59.553 52.381 0.00 0.00 41.41 4.04
1012 1013 2.728922 AGTTTGTCGTGTTCGTCTCTC 58.271 47.619 0.00 0.00 38.33 3.20
1013 1014 2.865343 AGTTTGTCGTGTTCGTCTCT 57.135 45.000 0.00 0.00 38.33 3.10
1014 1015 3.920112 AAAGTTTGTCGTGTTCGTCTC 57.080 42.857 0.00 0.00 38.33 3.36
1015 1016 3.063045 GGAAAAGTTTGTCGTGTTCGTCT 59.937 43.478 0.00 0.00 38.33 4.18
1016 1017 3.348309 GGAAAAGTTTGTCGTGTTCGTC 58.652 45.455 0.00 0.00 38.33 4.20
1017 1018 2.096335 GGGAAAAGTTTGTCGTGTTCGT 59.904 45.455 0.00 0.00 38.33 3.85
1018 1019 2.096174 TGGGAAAAGTTTGTCGTGTTCG 59.904 45.455 0.00 0.00 38.55 3.95
1019 1020 3.768468 TGGGAAAAGTTTGTCGTGTTC 57.232 42.857 0.00 0.00 0.00 3.18
1020 1021 3.119280 CCTTGGGAAAAGTTTGTCGTGTT 60.119 43.478 0.00 0.00 0.00 3.32
1021 1022 2.425668 CCTTGGGAAAAGTTTGTCGTGT 59.574 45.455 0.00 0.00 0.00 4.49
1022 1023 2.223711 CCCTTGGGAAAAGTTTGTCGTG 60.224 50.000 0.00 0.00 0.00 4.35
1023 1024 2.028876 CCCTTGGGAAAAGTTTGTCGT 58.971 47.619 0.00 0.00 0.00 4.34
1024 1025 2.028876 ACCCTTGGGAAAAGTTTGTCG 58.971 47.619 13.39 0.00 0.00 4.35
1025 1026 4.891168 TCTAACCCTTGGGAAAAGTTTGTC 59.109 41.667 13.39 0.00 0.00 3.18
1026 1027 4.647853 GTCTAACCCTTGGGAAAAGTTTGT 59.352 41.667 13.39 0.00 0.00 2.83
1027 1028 4.647399 TGTCTAACCCTTGGGAAAAGTTTG 59.353 41.667 13.39 0.00 0.00 2.93
1028 1029 4.647853 GTGTCTAACCCTTGGGAAAAGTTT 59.352 41.667 13.39 0.00 0.00 2.66
1042 1043 1.468736 CGGAAGCCTACGTGTCTAACC 60.469 57.143 0.00 0.00 0.00 2.85
1046 1047 4.092343 ACGGAAGCCTACGTGTCT 57.908 55.556 0.00 0.00 42.39 3.41
1053 1054 1.192146 AGCCTTGACACGGAAGCCTA 61.192 55.000 1.33 0.00 0.00 3.93
1056 1057 2.328099 CCAGCCTTGACACGGAAGC 61.328 63.158 1.33 0.00 0.00 3.86
1071 1072 2.358737 GTGGAAGGGCGTGACCAG 60.359 66.667 6.62 0.00 42.05 4.00
1180 1181 0.636101 TGGGGAATCTGAATTGGGGG 59.364 55.000 0.00 0.00 0.00 5.40
1201 1202 0.815213 AACCCATGGATGCGACGATG 60.815 55.000 15.22 0.00 0.00 3.84
1492 1510 1.221293 CCTTGCAGGAGAGCTCAGG 59.779 63.158 17.77 8.09 37.67 3.86
1494 1512 4.547166 TCCTTGCAGGAGAGCTCA 57.453 55.556 17.77 0.00 40.06 4.26
1570 1588 1.275291 TCACCAGGAAATCGACTCCAC 59.725 52.381 15.85 0.00 35.20 4.02
1615 1633 1.809619 CGATTCCAAGAGGCGCGAA 60.810 57.895 12.10 0.00 33.74 4.70
1616 1634 2.016393 ATCGATTCCAAGAGGCGCGA 62.016 55.000 12.10 0.00 36.44 5.87
1687 1706 2.352960 GTCATTTTCACTCATCCGCCTC 59.647 50.000 0.00 0.00 0.00 4.70
1718 1740 8.575649 AACCCGAAGAAATAATTGTTCTGTAT 57.424 30.769 6.91 0.00 36.84 2.29
1721 1743 6.908825 TGAACCCGAAGAAATAATTGTTCTG 58.091 36.000 6.91 0.00 36.84 3.02
1723 1745 7.141100 TCTGAACCCGAAGAAATAATTGTTC 57.859 36.000 0.00 0.00 35.92 3.18
1729 1751 5.417580 CCCAATTCTGAACCCGAAGAAATAA 59.582 40.000 0.00 0.00 36.09 1.40
1739 1761 0.898326 AACGGCCCAATTCTGAACCC 60.898 55.000 0.00 0.00 0.00 4.11
1858 1882 7.518161 TGTTAAGTCATCAAAGCTGTAAATCG 58.482 34.615 0.00 0.00 0.00 3.34
1876 1900 9.498307 CACAATTTTACTTTCGAACTGTTAAGT 57.502 29.630 10.88 10.88 38.71 2.24
1921 1945 5.230306 GCTCGTGAATACAGACAAGTGTATC 59.770 44.000 0.00 0.00 41.80 2.24
1937 1978 3.189080 CCAAGAATGAACATGCTCGTGAA 59.811 43.478 0.00 0.00 0.00 3.18
1972 2013 0.457853 GTGATGTCCGCGCTCAACTA 60.458 55.000 5.56 0.00 0.00 2.24
1973 2014 1.738099 GTGATGTCCGCGCTCAACT 60.738 57.895 5.56 0.00 0.00 3.16
1981 2022 2.526304 TATAGCAAGGTGATGTCCGC 57.474 50.000 0.00 0.00 0.00 5.54
2074 2115 4.753610 TGCAGAACAGAAAGATTGTCTCTG 59.246 41.667 0.00 0.00 41.93 3.35
2075 2116 4.754114 GTGCAGAACAGAAAGATTGTCTCT 59.246 41.667 0.00 0.00 34.96 3.10
2076 2117 4.512944 TGTGCAGAACAGAAAGATTGTCTC 59.487 41.667 0.00 0.00 33.78 3.36
2077 2118 4.454678 TGTGCAGAACAGAAAGATTGTCT 58.545 39.130 0.00 0.00 33.78 3.41
2078 2119 4.818534 TGTGCAGAACAGAAAGATTGTC 57.181 40.909 0.00 0.00 33.78 3.18
2119 2164 9.216117 GTACAAAGAAATTGCTTACTTCCTCTA 57.784 33.333 0.00 0.00 43.13 2.43
2171 2216 5.090139 TGGGTTCCACATTTGTATTTCCAT 58.910 37.500 0.00 0.00 0.00 3.41
2188 2233 6.259387 AGTTTATACGAATTTCCGATGGGTTC 59.741 38.462 0.00 0.00 33.83 3.62
2191 2236 6.427150 CAAGTTTATACGAATTTCCGATGGG 58.573 40.000 0.00 0.00 0.00 4.00
2192 2237 5.907391 GCAAGTTTATACGAATTTCCGATGG 59.093 40.000 0.00 0.00 0.00 3.51
2204 2249 9.607285 AAGTTGACAAAATAGCAAGTTTATACG 57.393 29.630 0.00 0.00 32.84 3.06
2209 2254 7.112452 AGGAAGTTGACAAAATAGCAAGTTT 57.888 32.000 0.00 0.00 35.85 2.66
2215 2260 4.681483 GTGCAAGGAAGTTGACAAAATAGC 59.319 41.667 0.00 0.00 38.60 2.97
2216 2261 5.687285 GTGTGCAAGGAAGTTGACAAAATAG 59.313 40.000 0.00 0.00 38.60 1.73
2240 2287 1.811965 TCACCAATCAATGTTGAGCCG 59.188 47.619 1.65 0.00 41.08 5.52
2294 2343 5.415077 TGAGCAGGTACTAAGTAACTCACTC 59.585 44.000 0.00 0.00 33.32 3.51
2339 2396 3.244353 CCTATCCAGCCTAGTTGGACATG 60.244 52.174 13.70 0.00 45.08 3.21
2348 2405 7.162082 CCAAAGTATAAACCTATCCAGCCTAG 58.838 42.308 0.00 0.00 0.00 3.02
2437 2494 6.378280 AGGAACATTGTGGGTTAATTCAGATC 59.622 38.462 0.00 0.00 0.00 2.75
2749 2806 1.360820 GCTTCTTCGCAGTACCTTCC 58.639 55.000 0.00 0.00 0.00 3.46
2758 2815 0.324614 TCTCATTGGGCTTCTTCGCA 59.675 50.000 0.00 0.00 0.00 5.10
2809 2866 4.234574 TGACTGTAGCTTGTTACACATCG 58.765 43.478 0.00 0.00 30.74 3.84
2872 2935 6.134754 CACTTTAGTACCCTAGATACCCAGT 58.865 44.000 0.00 0.00 0.00 4.00
3067 3130 5.912396 CAGAGAAGATAGATACACTTCGCAC 59.088 44.000 0.00 0.00 42.95 5.34
3120 3188 2.483714 GCCCTAAGATCTTCATGTCGCA 60.484 50.000 12.24 0.00 0.00 5.10
3158 3226 6.589523 CAGCCCTAAGATCTTCAGATTTATCG 59.410 42.308 12.24 0.00 34.37 2.92
3235 3303 9.020731 CCCCTGTTTAGTTCATGTTTTTATACT 57.979 33.333 0.00 0.00 0.00 2.12
3297 3365 5.245526 GTCCATGTATACCCGTCCTTAATCT 59.754 44.000 0.00 0.00 0.00 2.40
3411 3483 3.492656 GCGCTGTACAGATAAATGGAGGA 60.493 47.826 27.08 0.00 0.00 3.71
3413 3485 2.802816 GGCGCTGTACAGATAAATGGAG 59.197 50.000 27.08 0.33 0.00 3.86
3421 3493 1.079127 GTGTGGGCGCTGTACAGAT 60.079 57.895 27.08 0.00 0.00 2.90
3590 3667 3.218453 TCTTCATTTTGTCTTTCCGGCA 58.782 40.909 0.00 0.00 0.00 5.69
3643 3721 7.620880 AGCTGTTAATAGATCACCAAACACTA 58.379 34.615 3.01 0.00 0.00 2.74
3648 3726 7.090173 GCAAAAGCTGTTAATAGATCACCAAA 58.910 34.615 3.01 0.00 0.00 3.28
3684 3762 6.098124 TGTTTCATTTCCTTCCTTCACATTGT 59.902 34.615 0.00 0.00 0.00 2.71
3743 3821 0.110678 TAACGGGGTGGTTGAATGCA 59.889 50.000 0.00 0.00 0.00 3.96
3750 3828 2.269883 GCGGATAACGGGGTGGTT 59.730 61.111 0.00 0.00 44.51 3.67
3852 3930 1.464023 CGCACGCTCAAAACATACCTG 60.464 52.381 0.00 0.00 0.00 4.00
3856 3934 1.503294 TGTCGCACGCTCAAAACATA 58.497 45.000 0.00 0.00 0.00 2.29
3899 3997 7.171848 TGTTCGTTTAACAGCACAGTAATGTAT 59.828 33.333 0.00 0.00 43.22 2.29
3900 3998 6.479331 TGTTCGTTTAACAGCACAGTAATGTA 59.521 34.615 0.00 0.00 43.22 2.29
3901 3999 5.294799 TGTTCGTTTAACAGCACAGTAATGT 59.705 36.000 0.00 0.00 43.22 2.71
3902 4000 5.743467 TGTTCGTTTAACAGCACAGTAATG 58.257 37.500 0.00 0.00 43.22 1.90
3903 4001 5.994887 TGTTCGTTTAACAGCACAGTAAT 57.005 34.783 0.00 0.00 43.22 1.89
4017 4116 6.810676 CAGCTAGCGATGTAGTATCATGAATT 59.189 38.462 9.55 0.00 0.00 2.17
4029 4133 2.225041 ACCCTATCCAGCTAGCGATGTA 60.225 50.000 9.55 1.17 0.00 2.29
4030 4134 1.261480 CCCTATCCAGCTAGCGATGT 58.739 55.000 9.55 0.00 0.00 3.06
4031 4135 1.067283 CACCCTATCCAGCTAGCGATG 60.067 57.143 9.55 2.72 0.00 3.84
4040 4144 2.236146 TGCACACTTACACCCTATCCAG 59.764 50.000 0.00 0.00 0.00 3.86
4086 4191 0.248498 CTCCGCAGATGCATTGCTTG 60.248 55.000 22.65 16.53 42.21 4.01
4125 4236 3.540617 CTCTCGTCTCCTCTCTTGATCA 58.459 50.000 0.00 0.00 0.00 2.92
4153 4264 3.317449 GTGCTGGAAACGGTACCTT 57.683 52.632 10.90 0.00 45.53 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.