Multiple sequence alignment - TraesCS3D01G306600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G306600 chr3D 100.000 2660 0 0 1 2660 420452784 420450125 0.000000e+00 4913.0
1 TraesCS3D01G306600 chr3D 85.082 610 55 15 1431 2025 420056102 420055514 8.200000e-165 590.0
2 TraesCS3D01G306600 chr3D 93.095 391 17 5 2014 2396 420053491 420053103 4.970000e-157 564.0
3 TraesCS3D01G306600 chr3D 94.737 76 4 0 2549 2624 420052966 420052891 4.650000e-23 119.0
4 TraesCS3D01G306600 chr3A 93.679 1851 75 24 582 2401 530496215 530498054 0.000000e+00 2732.0
5 TraesCS3D01G306600 chr3A 95.312 64 3 0 2593 2656 530498434 530498497 4.680000e-18 102.0
6 TraesCS3D01G306600 chr3A 85.870 92 11 2 580 669 530495619 530495710 2.180000e-16 97.1
7 TraesCS3D01G306600 chr3B 94.702 1208 41 13 605 1804 547334606 547333414 0.000000e+00 1855.0
8 TraesCS3D01G306600 chr3B 88.148 540 27 15 1899 2401 547333040 547332501 2.260000e-170 608.0
9 TraesCS3D01G306600 chr3B 94.944 178 6 3 2224 2401 547332499 547332325 2.610000e-70 276.0
10 TraesCS3D01G306600 chr3B 91.304 92 8 0 1805 1896 547333296 547333205 2.780000e-25 126.0
11 TraesCS3D01G306600 chr3B 89.189 74 8 0 2551 2624 547332090 547332017 2.820000e-15 93.5
12 TraesCS3D01G306600 chr3B 80.833 120 6 5 2403 2521 547332199 547332096 7.890000e-11 78.7
13 TraesCS3D01G306600 chr2A 96.053 152 6 0 1071 1222 528094735 528094584 5.690000e-62 248.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G306600 chr3D 420450125 420452784 2659 True 4913.000000 4913 100.000000 1 2660 1 chr3D.!!$R1 2659
1 TraesCS3D01G306600 chr3D 420052891 420056102 3211 True 424.333333 590 90.971333 1431 2624 3 chr3D.!!$R2 1193
2 TraesCS3D01G306600 chr3A 530495619 530498497 2878 False 977.033333 2732 91.620333 580 2656 3 chr3A.!!$F1 2076
3 TraesCS3D01G306600 chr3B 547332017 547334606 2589 True 506.200000 1855 89.853333 605 2624 6 chr3B.!!$R1 2019

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
47 48 0.033504 TCCAAGTCCTCAACGACTGC 59.966 55.0 0.0 0.0 42.35 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1877 2605 0.386113 GACAGTAGCCGTGAGATCCC 59.614 60.0 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.624913 AGAGAGAGAGAGAGAAGAGGAGA 58.375 47.826 0.00 0.00 0.00 3.71
23 24 5.222870 AGAGAGAGAGAGAGAAGAGGAGAT 58.777 45.833 0.00 0.00 0.00 2.75
24 25 5.669447 AGAGAGAGAGAGAGAAGAGGAGATT 59.331 44.000 0.00 0.00 0.00 2.40
25 26 5.688807 AGAGAGAGAGAGAAGAGGAGATTG 58.311 45.833 0.00 0.00 0.00 2.67
26 27 4.210331 AGAGAGAGAGAAGAGGAGATTGC 58.790 47.826 0.00 0.00 0.00 3.56
27 28 4.079558 AGAGAGAGAGAAGAGGAGATTGCT 60.080 45.833 0.00 0.00 0.00 3.91
28 29 4.613437 AGAGAGAGAAGAGGAGATTGCTT 58.387 43.478 0.00 0.00 0.00 3.91
29 30 4.646492 AGAGAGAGAAGAGGAGATTGCTTC 59.354 45.833 0.00 0.00 38.58 3.86
30 31 3.706086 AGAGAGAAGAGGAGATTGCTTCC 59.294 47.826 0.00 0.00 38.98 3.46
31 32 3.448934 AGAGAAGAGGAGATTGCTTCCA 58.551 45.455 0.00 0.00 38.98 3.53
32 33 3.843027 AGAGAAGAGGAGATTGCTTCCAA 59.157 43.478 0.00 0.00 38.98 3.53
33 34 4.080975 AGAGAAGAGGAGATTGCTTCCAAG 60.081 45.833 0.00 0.00 38.98 3.61
34 35 3.586618 AGAAGAGGAGATTGCTTCCAAGT 59.413 43.478 0.00 0.00 38.98 3.16
35 36 3.625649 AGAGGAGATTGCTTCCAAGTC 57.374 47.619 0.00 0.00 33.80 3.01
36 37 2.238395 AGAGGAGATTGCTTCCAAGTCC 59.762 50.000 0.00 0.00 37.89 3.85
37 38 2.238395 GAGGAGATTGCTTCCAAGTCCT 59.762 50.000 8.91 8.91 44.82 3.85
38 39 2.238395 AGGAGATTGCTTCCAAGTCCTC 59.762 50.000 4.95 0.00 41.27 3.71
39 40 2.026822 GGAGATTGCTTCCAAGTCCTCA 60.027 50.000 0.00 0.00 36.10 3.86
40 41 3.560025 GGAGATTGCTTCCAAGTCCTCAA 60.560 47.826 0.00 0.00 36.10 3.02
41 42 3.416156 AGATTGCTTCCAAGTCCTCAAC 58.584 45.455 0.00 0.00 33.80 3.18
42 43 1.593196 TTGCTTCCAAGTCCTCAACG 58.407 50.000 0.00 0.00 0.00 4.10
43 44 0.756294 TGCTTCCAAGTCCTCAACGA 59.244 50.000 0.00 0.00 0.00 3.85
44 45 1.149148 GCTTCCAAGTCCTCAACGAC 58.851 55.000 0.00 0.00 0.00 4.34
45 46 1.270358 GCTTCCAAGTCCTCAACGACT 60.270 52.381 0.00 0.00 45.12 4.18
46 47 2.408050 CTTCCAAGTCCTCAACGACTG 58.592 52.381 0.00 0.00 42.35 3.51
47 48 0.033504 TCCAAGTCCTCAACGACTGC 59.966 55.000 0.00 0.00 42.35 4.40
48 49 0.034059 CCAAGTCCTCAACGACTGCT 59.966 55.000 0.00 0.00 42.35 4.24
49 50 1.272490 CCAAGTCCTCAACGACTGCTA 59.728 52.381 0.00 0.00 42.35 3.49
50 51 2.600731 CAAGTCCTCAACGACTGCTAG 58.399 52.381 0.00 0.00 42.35 3.42
51 52 1.912417 AGTCCTCAACGACTGCTAGT 58.088 50.000 0.00 0.00 41.60 2.57
52 53 1.542030 AGTCCTCAACGACTGCTAGTG 59.458 52.381 0.00 0.00 41.60 2.74
53 54 1.540267 GTCCTCAACGACTGCTAGTGA 59.460 52.381 0.00 0.00 0.00 3.41
54 55 2.164624 GTCCTCAACGACTGCTAGTGAT 59.835 50.000 0.00 0.00 0.00 3.06
55 56 2.826128 TCCTCAACGACTGCTAGTGATT 59.174 45.455 0.00 0.00 0.00 2.57
56 57 4.014406 TCCTCAACGACTGCTAGTGATTA 58.986 43.478 0.00 0.00 0.00 1.75
57 58 4.106197 CCTCAACGACTGCTAGTGATTAC 58.894 47.826 0.00 0.00 0.00 1.89
58 59 4.380550 CCTCAACGACTGCTAGTGATTACA 60.381 45.833 0.00 0.00 0.00 2.41
59 60 5.128992 TCAACGACTGCTAGTGATTACAA 57.871 39.130 0.00 0.00 0.00 2.41
60 61 5.161358 TCAACGACTGCTAGTGATTACAAG 58.839 41.667 0.00 0.00 0.00 3.16
61 62 4.785511 ACGACTGCTAGTGATTACAAGT 57.214 40.909 0.00 0.00 0.00 3.16
62 63 5.135508 ACGACTGCTAGTGATTACAAGTT 57.864 39.130 0.00 0.00 0.00 2.66
63 64 4.923871 ACGACTGCTAGTGATTACAAGTTG 59.076 41.667 0.00 0.00 0.00 3.16
64 65 4.923871 CGACTGCTAGTGATTACAAGTTGT 59.076 41.667 14.05 14.05 0.00 3.32
65 66 5.061064 CGACTGCTAGTGATTACAAGTTGTC 59.939 44.000 12.82 0.00 0.00 3.18
66 67 4.923871 ACTGCTAGTGATTACAAGTTGTCG 59.076 41.667 12.82 0.00 0.00 4.35
67 68 3.678072 TGCTAGTGATTACAAGTTGTCGC 59.322 43.478 12.82 5.21 0.00 5.19
68 69 3.062234 GCTAGTGATTACAAGTTGTCGCC 59.938 47.826 12.82 3.29 0.00 5.54
69 70 3.402628 AGTGATTACAAGTTGTCGCCT 57.597 42.857 12.82 0.03 0.00 5.52
70 71 3.067106 AGTGATTACAAGTTGTCGCCTG 58.933 45.455 12.82 0.00 0.00 4.85
71 72 3.064207 GTGATTACAAGTTGTCGCCTGA 58.936 45.455 12.82 0.00 0.00 3.86
72 73 3.064207 TGATTACAAGTTGTCGCCTGAC 58.936 45.455 12.82 0.00 45.71 3.51
73 74 1.873698 TTACAAGTTGTCGCCTGACC 58.126 50.000 12.82 0.00 44.86 4.02
74 75 0.319211 TACAAGTTGTCGCCTGACCG 60.319 55.000 12.82 0.00 44.86 4.79
75 76 2.030562 AAGTTGTCGCCTGACCGG 59.969 61.111 0.00 0.00 44.86 5.28
76 77 2.803817 AAGTTGTCGCCTGACCGGT 61.804 57.895 6.92 6.92 44.86 5.28
77 78 2.989055 AAGTTGTCGCCTGACCGGTG 62.989 60.000 14.63 0.00 44.86 4.94
78 79 3.542676 TTGTCGCCTGACCGGTGT 61.543 61.111 14.63 0.00 44.86 4.16
79 80 3.509137 TTGTCGCCTGACCGGTGTC 62.509 63.158 14.63 0.00 44.86 3.67
86 87 2.747022 TGACCGGTGTCATGGTGG 59.253 61.111 14.63 0.00 46.40 4.61
87 88 2.046314 GACCGGTGTCATGGTGGG 60.046 66.667 14.63 0.00 41.37 4.61
88 89 4.344865 ACCGGTGTCATGGTGGGC 62.345 66.667 6.12 0.00 37.02 5.36
98 99 3.484806 TGGTGGGCCACAACTCGT 61.485 61.111 35.69 0.00 40.46 4.18
99 100 2.141448 TGGTGGGCCACAACTCGTA 61.141 57.895 35.69 11.34 40.46 3.43
100 101 1.298667 GGTGGGCCACAACTCGTAT 59.701 57.895 35.69 0.00 35.86 3.06
101 102 0.322187 GGTGGGCCACAACTCGTATT 60.322 55.000 35.69 0.00 35.86 1.89
102 103 1.084289 GTGGGCCACAACTCGTATTC 58.916 55.000 31.26 0.00 34.08 1.75
103 104 0.687920 TGGGCCACAACTCGTATTCA 59.312 50.000 0.00 0.00 0.00 2.57
104 105 1.084289 GGGCCACAACTCGTATTCAC 58.916 55.000 4.39 0.00 0.00 3.18
105 106 1.084289 GGCCACAACTCGTATTCACC 58.916 55.000 0.00 0.00 0.00 4.02
106 107 0.719465 GCCACAACTCGTATTCACCG 59.281 55.000 0.00 0.00 0.00 4.94
107 108 1.355971 CCACAACTCGTATTCACCGG 58.644 55.000 0.00 0.00 0.00 5.28
108 109 1.337447 CCACAACTCGTATTCACCGGT 60.337 52.381 0.00 0.00 0.00 5.28
109 110 2.094597 CCACAACTCGTATTCACCGGTA 60.095 50.000 6.87 0.00 0.00 4.02
110 111 2.919229 CACAACTCGTATTCACCGGTAC 59.081 50.000 6.87 0.00 0.00 3.34
111 112 2.094545 ACAACTCGTATTCACCGGTACC 60.095 50.000 6.87 0.16 0.00 3.34
112 113 0.734889 ACTCGTATTCACCGGTACCG 59.265 55.000 27.68 27.68 39.44 4.02
113 114 1.016627 CTCGTATTCACCGGTACCGA 58.983 55.000 35.41 16.20 42.83 4.69
114 115 1.401552 CTCGTATTCACCGGTACCGAA 59.598 52.381 35.41 21.69 42.83 4.30
115 116 1.401552 TCGTATTCACCGGTACCGAAG 59.598 52.381 35.41 25.02 42.83 3.79
116 117 1.401552 CGTATTCACCGGTACCGAAGA 59.598 52.381 35.41 26.79 42.83 2.87
117 118 2.159393 CGTATTCACCGGTACCGAAGAA 60.159 50.000 35.41 32.21 42.83 2.52
118 119 2.667473 ATTCACCGGTACCGAAGAAG 57.333 50.000 35.41 20.02 42.83 2.85
119 120 1.619654 TTCACCGGTACCGAAGAAGA 58.380 50.000 35.41 20.27 42.83 2.87
120 121 1.843368 TCACCGGTACCGAAGAAGAT 58.157 50.000 35.41 8.53 42.83 2.40
121 122 1.475280 TCACCGGTACCGAAGAAGATG 59.525 52.381 35.41 17.79 42.83 2.90
122 123 1.475280 CACCGGTACCGAAGAAGATGA 59.525 52.381 35.41 0.00 42.83 2.92
123 124 1.749634 ACCGGTACCGAAGAAGATGAG 59.250 52.381 35.41 16.32 42.83 2.90
124 125 1.749634 CCGGTACCGAAGAAGATGAGT 59.250 52.381 35.41 0.00 42.83 3.41
125 126 2.479730 CCGGTACCGAAGAAGATGAGTG 60.480 54.545 35.41 9.88 42.83 3.51
126 127 2.422479 CGGTACCGAAGAAGATGAGTGA 59.578 50.000 30.64 0.00 42.83 3.41
127 128 3.487711 CGGTACCGAAGAAGATGAGTGAG 60.488 52.174 30.64 0.00 42.83 3.51
128 129 3.695060 GGTACCGAAGAAGATGAGTGAGA 59.305 47.826 0.00 0.00 0.00 3.27
129 130 4.201970 GGTACCGAAGAAGATGAGTGAGAG 60.202 50.000 0.00 0.00 0.00 3.20
130 131 3.691575 ACCGAAGAAGATGAGTGAGAGA 58.308 45.455 0.00 0.00 0.00 3.10
131 132 4.082845 ACCGAAGAAGATGAGTGAGAGAA 58.917 43.478 0.00 0.00 0.00 2.87
132 133 4.157656 ACCGAAGAAGATGAGTGAGAGAAG 59.842 45.833 0.00 0.00 0.00 2.85
133 134 4.397730 CCGAAGAAGATGAGTGAGAGAAGA 59.602 45.833 0.00 0.00 0.00 2.87
134 135 5.449041 CCGAAGAAGATGAGTGAGAGAAGAG 60.449 48.000 0.00 0.00 0.00 2.85
135 136 5.449041 CGAAGAAGATGAGTGAGAGAAGAGG 60.449 48.000 0.00 0.00 0.00 3.69
136 137 5.191727 AGAAGATGAGTGAGAGAAGAGGA 57.808 43.478 0.00 0.00 0.00 3.71
137 138 5.195940 AGAAGATGAGTGAGAGAAGAGGAG 58.804 45.833 0.00 0.00 0.00 3.69
138 139 4.860802 AGATGAGTGAGAGAAGAGGAGA 57.139 45.455 0.00 0.00 0.00 3.71
139 140 5.393068 AGATGAGTGAGAGAAGAGGAGAT 57.607 43.478 0.00 0.00 0.00 2.75
140 141 5.769835 AGATGAGTGAGAGAAGAGGAGATT 58.230 41.667 0.00 0.00 0.00 2.40
141 142 5.595542 AGATGAGTGAGAGAAGAGGAGATTG 59.404 44.000 0.00 0.00 0.00 2.67
142 143 4.671831 TGAGTGAGAGAAGAGGAGATTGT 58.328 43.478 0.00 0.00 0.00 2.71
143 144 5.083122 TGAGTGAGAGAAGAGGAGATTGTT 58.917 41.667 0.00 0.00 0.00 2.83
144 145 5.541868 TGAGTGAGAGAAGAGGAGATTGTTT 59.458 40.000 0.00 0.00 0.00 2.83
145 146 6.036577 AGTGAGAGAAGAGGAGATTGTTTC 57.963 41.667 0.00 0.00 0.00 2.78
146 147 5.046663 AGTGAGAGAAGAGGAGATTGTTTCC 60.047 44.000 0.00 0.00 34.83 3.13
147 148 4.840680 TGAGAGAAGAGGAGATTGTTTCCA 59.159 41.667 0.00 0.00 37.18 3.53
148 149 5.307976 TGAGAGAAGAGGAGATTGTTTCCAA 59.692 40.000 0.00 0.00 37.18 3.53
149 150 5.555966 AGAGAAGAGGAGATTGTTTCCAAC 58.444 41.667 0.00 0.00 37.18 3.77
150 151 5.072329 AGAGAAGAGGAGATTGTTTCCAACA 59.928 40.000 0.00 0.00 40.21 3.33
175 176 4.681074 AAAAACCCGATTGTTGGTGAAT 57.319 36.364 0.00 0.00 34.34 2.57
176 177 4.681074 AAAACCCGATTGTTGGTGAATT 57.319 36.364 0.00 0.00 34.34 2.17
177 178 3.934457 AACCCGATTGTTGGTGAATTC 57.066 42.857 0.00 0.00 34.34 2.17
178 179 2.870175 ACCCGATTGTTGGTGAATTCA 58.130 42.857 3.38 3.38 32.36 2.57
179 180 3.226777 ACCCGATTGTTGGTGAATTCAA 58.773 40.909 10.35 0.00 32.36 2.69
180 181 3.831911 ACCCGATTGTTGGTGAATTCAAT 59.168 39.130 10.35 0.00 32.36 2.57
181 182 4.283212 ACCCGATTGTTGGTGAATTCAATT 59.717 37.500 10.35 0.00 32.36 2.32
182 183 5.221621 ACCCGATTGTTGGTGAATTCAATTT 60.222 36.000 10.35 0.00 32.36 1.82
183 184 5.700373 CCCGATTGTTGGTGAATTCAATTTT 59.300 36.000 10.35 0.00 31.87 1.82
184 185 6.870965 CCCGATTGTTGGTGAATTCAATTTTA 59.129 34.615 10.35 0.00 31.87 1.52
185 186 7.063308 CCCGATTGTTGGTGAATTCAATTTTAG 59.937 37.037 10.35 0.00 31.87 1.85
186 187 7.598493 CCGATTGTTGGTGAATTCAATTTTAGT 59.402 33.333 10.35 0.00 31.87 2.24
187 188 8.977505 CGATTGTTGGTGAATTCAATTTTAGTT 58.022 29.630 10.35 0.00 31.87 2.24
213 214 7.840342 ACACAAAATTAACAAATCTGTTGCA 57.160 28.000 0.00 0.00 45.53 4.08
214 215 8.261492 ACACAAAATTAACAAATCTGTTGCAA 57.739 26.923 0.00 0.00 45.53 4.08
215 216 8.891720 ACACAAAATTAACAAATCTGTTGCAAT 58.108 25.926 0.59 0.00 45.53 3.56
220 221 9.439500 AAATTAACAAATCTGTTGCAATATGCT 57.561 25.926 0.59 0.00 45.53 3.79
257 258 8.954950 ATGTAGGACATCAAATTAGTCTCTTG 57.045 34.615 0.00 0.00 32.38 3.02
258 259 8.134202 TGTAGGACATCAAATTAGTCTCTTGA 57.866 34.615 0.00 0.00 33.82 3.02
259 260 8.253810 TGTAGGACATCAAATTAGTCTCTTGAG 58.746 37.037 0.00 0.00 32.87 3.02
260 261 7.487822 AGGACATCAAATTAGTCTCTTGAGA 57.512 36.000 0.00 0.00 32.87 3.27
261 262 8.088463 AGGACATCAAATTAGTCTCTTGAGAT 57.912 34.615 3.50 0.00 32.87 2.75
262 263 8.547173 AGGACATCAAATTAGTCTCTTGAGATT 58.453 33.333 3.50 2.43 32.87 2.40
263 264 9.171877 GGACATCAAATTAGTCTCTTGAGATTT 57.828 33.333 3.50 0.00 32.87 2.17
265 266 9.956640 ACATCAAATTAGTCTCTTGAGATTTCT 57.043 29.630 3.50 0.00 32.87 2.52
275 276 8.257306 AGTCTCTTGAGATTTCTTTAGTCATCC 58.743 37.037 3.50 0.00 0.00 3.51
276 277 8.257306 GTCTCTTGAGATTTCTTTAGTCATCCT 58.743 37.037 3.50 0.00 0.00 3.24
277 278 8.474025 TCTCTTGAGATTTCTTTAGTCATCCTC 58.526 37.037 0.00 0.00 0.00 3.71
278 279 7.261325 TCTTGAGATTTCTTTAGTCATCCTCG 58.739 38.462 0.00 0.00 0.00 4.63
279 280 5.352284 TGAGATTTCTTTAGTCATCCTCGC 58.648 41.667 0.00 0.00 0.00 5.03
280 281 5.127845 TGAGATTTCTTTAGTCATCCTCGCT 59.872 40.000 0.00 0.00 0.00 4.93
281 282 5.596845 AGATTTCTTTAGTCATCCTCGCTC 58.403 41.667 0.00 0.00 0.00 5.03
282 283 5.362430 AGATTTCTTTAGTCATCCTCGCTCT 59.638 40.000 0.00 0.00 0.00 4.09
283 284 5.407407 TTTCTTTAGTCATCCTCGCTCTT 57.593 39.130 0.00 0.00 0.00 2.85
284 285 6.525578 TTTCTTTAGTCATCCTCGCTCTTA 57.474 37.500 0.00 0.00 0.00 2.10
285 286 6.716934 TTCTTTAGTCATCCTCGCTCTTAT 57.283 37.500 0.00 0.00 0.00 1.73
286 287 6.716934 TCTTTAGTCATCCTCGCTCTTATT 57.283 37.500 0.00 0.00 0.00 1.40
287 288 6.740110 TCTTTAGTCATCCTCGCTCTTATTC 58.260 40.000 0.00 0.00 0.00 1.75
288 289 5.455056 TTAGTCATCCTCGCTCTTATTCC 57.545 43.478 0.00 0.00 0.00 3.01
289 290 3.571590 AGTCATCCTCGCTCTTATTCCT 58.428 45.455 0.00 0.00 0.00 3.36
290 291 3.572255 AGTCATCCTCGCTCTTATTCCTC 59.428 47.826 0.00 0.00 0.00 3.71
291 292 2.894126 TCATCCTCGCTCTTATTCCTCC 59.106 50.000 0.00 0.00 0.00 4.30
292 293 1.319541 TCCTCGCTCTTATTCCTCCG 58.680 55.000 0.00 0.00 0.00 4.63
293 294 1.033574 CCTCGCTCTTATTCCTCCGT 58.966 55.000 0.00 0.00 0.00 4.69
294 295 1.409427 CCTCGCTCTTATTCCTCCGTT 59.591 52.381 0.00 0.00 0.00 4.44
295 296 2.159085 CCTCGCTCTTATTCCTCCGTTT 60.159 50.000 0.00 0.00 0.00 3.60
296 297 3.117046 CTCGCTCTTATTCCTCCGTTTC 58.883 50.000 0.00 0.00 0.00 2.78
297 298 1.852895 CGCTCTTATTCCTCCGTTTCG 59.147 52.381 0.00 0.00 0.00 3.46
298 299 2.734492 CGCTCTTATTCCTCCGTTTCGT 60.734 50.000 0.00 0.00 0.00 3.85
299 300 2.858941 GCTCTTATTCCTCCGTTTCGTC 59.141 50.000 0.00 0.00 0.00 4.20
300 301 3.106672 CTCTTATTCCTCCGTTTCGTCG 58.893 50.000 0.00 0.00 0.00 5.12
307 308 2.125673 CCGTTTCGTCGGCTCCAT 60.126 61.111 0.00 0.00 43.96 3.41
308 309 1.140161 CCGTTTCGTCGGCTCCATA 59.860 57.895 0.00 0.00 43.96 2.74
309 310 1.143969 CCGTTTCGTCGGCTCCATAC 61.144 60.000 0.00 0.00 43.96 2.39
310 311 1.143969 CGTTTCGTCGGCTCCATACC 61.144 60.000 0.00 0.00 0.00 2.73
311 312 0.108520 GTTTCGTCGGCTCCATACCA 60.109 55.000 0.00 0.00 0.00 3.25
312 313 0.828022 TTTCGTCGGCTCCATACCAT 59.172 50.000 0.00 0.00 0.00 3.55
313 314 0.387929 TTCGTCGGCTCCATACCATC 59.612 55.000 0.00 0.00 0.00 3.51
314 315 0.467474 TCGTCGGCTCCATACCATCT 60.467 55.000 0.00 0.00 0.00 2.90
315 316 1.202842 TCGTCGGCTCCATACCATCTA 60.203 52.381 0.00 0.00 0.00 1.98
316 317 1.200252 CGTCGGCTCCATACCATCTAG 59.800 57.143 0.00 0.00 0.00 2.43
317 318 2.240279 GTCGGCTCCATACCATCTAGT 58.760 52.381 0.00 0.00 0.00 2.57
318 319 2.628657 GTCGGCTCCATACCATCTAGTT 59.371 50.000 0.00 0.00 0.00 2.24
319 320 3.069729 GTCGGCTCCATACCATCTAGTTT 59.930 47.826 0.00 0.00 0.00 2.66
320 321 3.069586 TCGGCTCCATACCATCTAGTTTG 59.930 47.826 0.00 0.00 0.00 2.93
321 322 3.744660 GGCTCCATACCATCTAGTTTGG 58.255 50.000 11.45 11.45 39.44 3.28
323 324 4.130118 GCTCCATACCATCTAGTTTGGTG 58.870 47.826 22.46 11.71 46.81 4.17
324 325 4.708177 CTCCATACCATCTAGTTTGGTGG 58.292 47.826 22.46 17.69 46.81 4.61
325 326 3.118038 TCCATACCATCTAGTTTGGTGGC 60.118 47.826 22.46 0.00 46.81 5.01
326 327 3.214328 CATACCATCTAGTTTGGTGGCC 58.786 50.000 22.46 0.00 46.81 5.36
327 328 1.072266 ACCATCTAGTTTGGTGGCCA 58.928 50.000 16.17 0.00 45.71 5.36
328 329 1.271926 ACCATCTAGTTTGGTGGCCAC 60.272 52.381 28.57 28.57 45.71 5.01
329 330 5.211631 TACCATCTAGTTTGGTGGCCACC 62.212 52.174 42.81 42.81 46.81 4.61
339 340 4.555709 TGGCCACCGTCGCTTGTT 62.556 61.111 0.00 0.00 0.00 2.83
340 341 3.723348 GGCCACCGTCGCTTGTTC 61.723 66.667 0.00 0.00 0.00 3.18
341 342 2.970324 GCCACCGTCGCTTGTTCA 60.970 61.111 0.00 0.00 0.00 3.18
342 343 2.539338 GCCACCGTCGCTTGTTCAA 61.539 57.895 0.00 0.00 0.00 2.69
343 344 2.018544 CCACCGTCGCTTGTTCAAA 58.981 52.632 0.00 0.00 0.00 2.69
344 345 0.316689 CCACCGTCGCTTGTTCAAAC 60.317 55.000 0.00 0.00 0.00 2.93
345 346 0.375454 CACCGTCGCTTGTTCAAACA 59.625 50.000 0.00 0.00 37.08 2.83
346 347 1.088306 ACCGTCGCTTGTTCAAACAA 58.912 45.000 7.97 7.97 45.88 2.83
347 348 1.673920 ACCGTCGCTTGTTCAAACAAT 59.326 42.857 8.64 0.00 46.71 2.71
348 349 2.098443 ACCGTCGCTTGTTCAAACAATT 59.902 40.909 8.64 0.00 46.71 2.32
349 350 2.719046 CCGTCGCTTGTTCAAACAATTC 59.281 45.455 8.64 4.01 46.71 2.17
350 351 2.397154 CGTCGCTTGTTCAAACAATTCG 59.603 45.455 17.09 17.09 46.71 3.34
351 352 3.359654 GTCGCTTGTTCAAACAATTCGT 58.640 40.909 19.94 0.00 46.71 3.85
352 353 3.789224 GTCGCTTGTTCAAACAATTCGTT 59.211 39.130 19.94 0.00 46.71 3.85
353 354 4.965158 GTCGCTTGTTCAAACAATTCGTTA 59.035 37.500 19.94 8.05 46.71 3.18
354 355 5.452944 GTCGCTTGTTCAAACAATTCGTTAA 59.547 36.000 19.94 7.60 46.71 2.01
355 356 6.021311 GTCGCTTGTTCAAACAATTCGTTAAA 60.021 34.615 19.94 7.37 46.71 1.52
356 357 6.021311 TCGCTTGTTCAAACAATTCGTTAAAC 60.021 34.615 19.94 0.00 46.71 2.01
357 358 6.407623 GCTTGTTCAAACAATTCGTTAAACC 58.592 36.000 8.64 0.00 46.71 3.27
358 359 6.035112 GCTTGTTCAAACAATTCGTTAAACCA 59.965 34.615 8.64 5.51 46.71 3.67
359 360 7.254286 GCTTGTTCAAACAATTCGTTAAACCAT 60.254 33.333 8.64 0.00 46.71 3.55
360 361 7.687005 TGTTCAAACAATTCGTTAAACCATC 57.313 32.000 0.00 0.00 36.59 3.51
361 362 6.697892 TGTTCAAACAATTCGTTAAACCATCC 59.302 34.615 0.00 0.00 36.59 3.51
362 363 5.774630 TCAAACAATTCGTTAAACCATCCC 58.225 37.500 0.00 0.00 36.59 3.85
363 364 4.794278 AACAATTCGTTAAACCATCCCC 57.206 40.909 0.00 0.00 35.52 4.81
364 365 3.768878 ACAATTCGTTAAACCATCCCCA 58.231 40.909 0.00 0.00 0.00 4.96
365 366 3.761752 ACAATTCGTTAAACCATCCCCAG 59.238 43.478 0.00 0.00 0.00 4.45
366 367 3.732048 ATTCGTTAAACCATCCCCAGT 57.268 42.857 0.00 0.00 0.00 4.00
367 368 3.512219 TTCGTTAAACCATCCCCAGTT 57.488 42.857 0.00 0.00 0.00 3.16
368 369 3.512219 TCGTTAAACCATCCCCAGTTT 57.488 42.857 0.00 0.00 39.44 2.66
369 370 4.637387 TCGTTAAACCATCCCCAGTTTA 57.363 40.909 0.00 0.00 37.39 2.01
370 371 4.325972 TCGTTAAACCATCCCCAGTTTAC 58.674 43.478 0.00 0.00 37.98 2.01
371 372 3.441222 CGTTAAACCATCCCCAGTTTACC 59.559 47.826 0.00 0.00 37.98 2.85
372 373 2.209690 AAACCATCCCCAGTTTACCG 57.790 50.000 0.00 0.00 34.52 4.02
373 374 1.364269 AACCATCCCCAGTTTACCGA 58.636 50.000 0.00 0.00 0.00 4.69
374 375 1.591768 ACCATCCCCAGTTTACCGAT 58.408 50.000 0.00 0.00 0.00 4.18
375 376 1.211949 ACCATCCCCAGTTTACCGATG 59.788 52.381 0.00 0.00 0.00 3.84
376 377 1.488812 CCATCCCCAGTTTACCGATGA 59.511 52.381 0.00 0.00 33.66 2.92
377 378 2.561569 CATCCCCAGTTTACCGATGAC 58.438 52.381 0.00 0.00 33.66 3.06
378 379 1.946984 TCCCCAGTTTACCGATGACT 58.053 50.000 0.00 0.00 0.00 3.41
379 380 1.829222 TCCCCAGTTTACCGATGACTC 59.171 52.381 0.00 0.00 0.00 3.36
380 381 1.134491 CCCCAGTTTACCGATGACTCC 60.134 57.143 0.00 0.00 0.00 3.85
381 382 1.831736 CCCAGTTTACCGATGACTCCT 59.168 52.381 0.00 0.00 0.00 3.69
382 383 2.236395 CCCAGTTTACCGATGACTCCTT 59.764 50.000 0.00 0.00 0.00 3.36
383 384 3.522553 CCAGTTTACCGATGACTCCTTC 58.477 50.000 0.00 0.00 0.00 3.46
384 385 3.179830 CAGTTTACCGATGACTCCTTCG 58.820 50.000 0.00 0.00 38.99 3.79
385 386 2.824341 AGTTTACCGATGACTCCTTCGT 59.176 45.455 0.00 0.00 38.01 3.85
386 387 3.119566 AGTTTACCGATGACTCCTTCGTC 60.120 47.826 0.00 0.00 38.01 4.20
387 388 2.414994 TACCGATGACTCCTTCGTCT 57.585 50.000 0.00 0.00 38.03 4.18
388 389 1.096416 ACCGATGACTCCTTCGTCTC 58.904 55.000 0.00 0.00 38.03 3.36
389 390 1.095600 CCGATGACTCCTTCGTCTCA 58.904 55.000 0.00 0.00 38.03 3.27
390 391 1.472878 CCGATGACTCCTTCGTCTCAA 59.527 52.381 0.00 0.00 38.03 3.02
391 392 2.094700 CCGATGACTCCTTCGTCTCAAA 60.095 50.000 0.00 0.00 38.03 2.69
392 393 2.917971 CGATGACTCCTTCGTCTCAAAC 59.082 50.000 0.00 0.00 38.03 2.93
393 394 2.814280 TGACTCCTTCGTCTCAAACC 57.186 50.000 0.00 0.00 35.00 3.27
394 395 1.343465 TGACTCCTTCGTCTCAAACCC 59.657 52.381 0.00 0.00 35.00 4.11
395 396 1.619332 GACTCCTTCGTCTCAAACCCT 59.381 52.381 0.00 0.00 0.00 4.34
396 397 2.824341 GACTCCTTCGTCTCAAACCCTA 59.176 50.000 0.00 0.00 0.00 3.53
397 398 3.236896 ACTCCTTCGTCTCAAACCCTAA 58.763 45.455 0.00 0.00 0.00 2.69
398 399 3.838903 ACTCCTTCGTCTCAAACCCTAAT 59.161 43.478 0.00 0.00 0.00 1.73
399 400 4.081586 ACTCCTTCGTCTCAAACCCTAATC 60.082 45.833 0.00 0.00 0.00 1.75
400 401 4.094476 TCCTTCGTCTCAAACCCTAATCT 58.906 43.478 0.00 0.00 0.00 2.40
401 402 5.266788 TCCTTCGTCTCAAACCCTAATCTA 58.733 41.667 0.00 0.00 0.00 1.98
402 403 5.718130 TCCTTCGTCTCAAACCCTAATCTAA 59.282 40.000 0.00 0.00 0.00 2.10
403 404 6.211986 TCCTTCGTCTCAAACCCTAATCTAAA 59.788 38.462 0.00 0.00 0.00 1.85
404 405 6.313164 CCTTCGTCTCAAACCCTAATCTAAAC 59.687 42.308 0.00 0.00 0.00 2.01
405 406 5.727434 TCGTCTCAAACCCTAATCTAAACC 58.273 41.667 0.00 0.00 0.00 3.27
406 407 4.874396 CGTCTCAAACCCTAATCTAAACCC 59.126 45.833 0.00 0.00 0.00 4.11
407 408 5.338137 CGTCTCAAACCCTAATCTAAACCCT 60.338 44.000 0.00 0.00 0.00 4.34
408 409 5.880887 GTCTCAAACCCTAATCTAAACCCTG 59.119 44.000 0.00 0.00 0.00 4.45
409 410 5.788533 TCTCAAACCCTAATCTAAACCCTGA 59.211 40.000 0.00 0.00 0.00 3.86
410 411 5.812286 TCAAACCCTAATCTAAACCCTGAC 58.188 41.667 0.00 0.00 0.00 3.51
411 412 4.857130 AACCCTAATCTAAACCCTGACC 57.143 45.455 0.00 0.00 0.00 4.02
412 413 3.120898 ACCCTAATCTAAACCCTGACCC 58.879 50.000 0.00 0.00 0.00 4.46
413 414 3.120108 CCCTAATCTAAACCCTGACCCA 58.880 50.000 0.00 0.00 0.00 4.51
414 415 3.722101 CCCTAATCTAAACCCTGACCCAT 59.278 47.826 0.00 0.00 0.00 4.00
415 416 4.202472 CCCTAATCTAAACCCTGACCCATC 60.202 50.000 0.00 0.00 0.00 3.51
416 417 4.660771 CCTAATCTAAACCCTGACCCATCT 59.339 45.833 0.00 0.00 0.00 2.90
417 418 4.779993 AATCTAAACCCTGACCCATCTC 57.220 45.455 0.00 0.00 0.00 2.75
418 419 3.199442 TCTAAACCCTGACCCATCTCA 57.801 47.619 0.00 0.00 0.00 3.27
419 420 3.526899 TCTAAACCCTGACCCATCTCAA 58.473 45.455 0.00 0.00 0.00 3.02
420 421 2.887151 AAACCCTGACCCATCTCAAG 57.113 50.000 0.00 0.00 0.00 3.02
421 422 1.747444 AACCCTGACCCATCTCAAGT 58.253 50.000 0.00 0.00 0.00 3.16
422 423 1.747444 ACCCTGACCCATCTCAAGTT 58.253 50.000 0.00 0.00 0.00 2.66
423 424 2.065799 ACCCTGACCCATCTCAAGTTT 58.934 47.619 0.00 0.00 0.00 2.66
424 425 3.256704 ACCCTGACCCATCTCAAGTTTA 58.743 45.455 0.00 0.00 0.00 2.01
425 426 3.655777 ACCCTGACCCATCTCAAGTTTAA 59.344 43.478 0.00 0.00 0.00 1.52
426 427 4.105697 ACCCTGACCCATCTCAAGTTTAAA 59.894 41.667 0.00 0.00 0.00 1.52
427 428 5.076873 CCCTGACCCATCTCAAGTTTAAAA 58.923 41.667 0.00 0.00 0.00 1.52
428 429 5.048013 CCCTGACCCATCTCAAGTTTAAAAC 60.048 44.000 0.00 0.00 0.00 2.43
429 430 5.770162 CCTGACCCATCTCAAGTTTAAAACT 59.230 40.000 0.00 0.00 45.46 2.66
430 431 6.294176 CCTGACCCATCTCAAGTTTAAAACTG 60.294 42.308 0.00 0.00 41.91 3.16
431 432 5.009610 TGACCCATCTCAAGTTTAAAACTGC 59.990 40.000 0.00 0.00 41.91 4.40
432 433 4.280929 ACCCATCTCAAGTTTAAAACTGCC 59.719 41.667 0.00 0.00 41.91 4.85
433 434 4.321974 CCCATCTCAAGTTTAAAACTGCCC 60.322 45.833 0.00 0.00 41.91 5.36
434 435 4.321974 CCATCTCAAGTTTAAAACTGCCCC 60.322 45.833 0.00 0.00 41.91 5.80
435 436 2.882137 TCTCAAGTTTAAAACTGCCCCG 59.118 45.455 0.00 0.00 41.91 5.73
436 437 1.338655 TCAAGTTTAAAACTGCCCCGC 59.661 47.619 0.00 0.00 41.91 6.13
437 438 0.677288 AAGTTTAAAACTGCCCCGCC 59.323 50.000 0.00 0.00 41.91 6.13
438 439 1.183030 AGTTTAAAACTGCCCCGCCC 61.183 55.000 0.00 0.00 41.01 6.13
439 440 1.909287 TTTAAAACTGCCCCGCCCC 60.909 57.895 0.00 0.00 0.00 5.80
440 441 3.890250 TTAAAACTGCCCCGCCCCC 62.890 63.158 0.00 0.00 0.00 5.40
449 450 4.694987 CCCGCCCCCACCAACAAT 62.695 66.667 0.00 0.00 0.00 2.71
450 451 3.381136 CCGCCCCCACCAACAATG 61.381 66.667 0.00 0.00 0.00 2.82
451 452 4.067913 CGCCCCCACCAACAATGC 62.068 66.667 0.00 0.00 0.00 3.56
452 453 2.604382 GCCCCCACCAACAATGCT 60.604 61.111 0.00 0.00 0.00 3.79
453 454 1.304879 GCCCCCACCAACAATGCTA 60.305 57.895 0.00 0.00 0.00 3.49
454 455 1.322538 GCCCCCACCAACAATGCTAG 61.323 60.000 0.00 0.00 0.00 3.42
455 456 0.684153 CCCCCACCAACAATGCTAGG 60.684 60.000 0.00 0.00 0.00 3.02
456 457 1.322538 CCCCACCAACAATGCTAGGC 61.323 60.000 0.00 0.00 0.00 3.93
457 458 1.322538 CCCACCAACAATGCTAGGCC 61.323 60.000 0.00 0.00 0.00 5.19
458 459 1.656818 CCACCAACAATGCTAGGCCG 61.657 60.000 0.00 0.00 0.00 6.13
459 460 1.378514 ACCAACAATGCTAGGCCGG 60.379 57.895 0.00 0.00 0.00 6.13
460 461 1.378514 CCAACAATGCTAGGCCGGT 60.379 57.895 1.90 0.00 0.00 5.28
461 462 1.656818 CCAACAATGCTAGGCCGGTG 61.657 60.000 1.90 0.00 0.00 4.94
462 463 0.960364 CAACAATGCTAGGCCGGTGT 60.960 55.000 1.90 0.00 0.00 4.16
463 464 0.676782 AACAATGCTAGGCCGGTGTC 60.677 55.000 1.90 0.00 0.00 3.67
464 465 1.078497 CAATGCTAGGCCGGTGTCA 60.078 57.895 1.90 0.00 0.00 3.58
465 466 0.464373 CAATGCTAGGCCGGTGTCAT 60.464 55.000 1.90 0.00 0.00 3.06
466 467 0.255890 AATGCTAGGCCGGTGTCATT 59.744 50.000 1.90 3.65 0.00 2.57
467 468 0.464373 ATGCTAGGCCGGTGTCATTG 60.464 55.000 1.90 0.00 0.00 2.82
468 469 1.078426 GCTAGGCCGGTGTCATTGT 60.078 57.895 1.90 0.00 0.00 2.71
469 470 0.676782 GCTAGGCCGGTGTCATTGTT 60.677 55.000 1.90 0.00 0.00 2.83
470 471 1.086696 CTAGGCCGGTGTCATTGTTG 58.913 55.000 1.90 0.00 0.00 3.33
471 472 0.322098 TAGGCCGGTGTCATTGTTGG 60.322 55.000 1.90 0.00 0.00 3.77
472 473 2.258286 GCCGGTGTCATTGTTGGC 59.742 61.111 1.90 0.00 35.04 4.52
473 474 2.268076 GCCGGTGTCATTGTTGGCT 61.268 57.895 1.90 0.00 39.38 4.75
474 475 1.875963 CCGGTGTCATTGTTGGCTC 59.124 57.895 0.00 0.00 0.00 4.70
475 476 1.586154 CCGGTGTCATTGTTGGCTCC 61.586 60.000 0.00 0.00 37.68 4.70
476 477 1.875963 GGTGTCATTGTTGGCTCCG 59.124 57.895 0.00 0.00 31.98 4.63
477 478 1.586154 GGTGTCATTGTTGGCTCCGG 61.586 60.000 0.00 0.00 31.98 5.14
478 479 1.971167 TGTCATTGTTGGCTCCGGC 60.971 57.895 0.00 0.00 37.82 6.13
479 480 1.675641 GTCATTGTTGGCTCCGGCT 60.676 57.895 0.00 0.00 38.73 5.52
480 481 1.377202 TCATTGTTGGCTCCGGCTC 60.377 57.895 0.00 0.00 38.73 4.70
481 482 1.675310 CATTGTTGGCTCCGGCTCA 60.675 57.895 0.00 0.00 38.73 4.26
482 483 1.074775 ATTGTTGGCTCCGGCTCAA 59.925 52.632 0.00 0.00 38.73 3.02
483 484 0.539438 ATTGTTGGCTCCGGCTCAAA 60.539 50.000 0.00 0.00 38.73 2.69
484 485 0.539438 TTGTTGGCTCCGGCTCAAAT 60.539 50.000 0.00 0.00 38.73 2.32
485 486 0.539438 TGTTGGCTCCGGCTCAAATT 60.539 50.000 0.00 0.00 38.73 1.82
486 487 1.271652 TGTTGGCTCCGGCTCAAATTA 60.272 47.619 0.00 0.00 38.73 1.40
487 488 1.132453 GTTGGCTCCGGCTCAAATTAC 59.868 52.381 0.00 0.00 38.73 1.89
488 489 0.742990 TGGCTCCGGCTCAAATTACG 60.743 55.000 0.00 0.00 38.73 3.18
489 490 0.743345 GGCTCCGGCTCAAATTACGT 60.743 55.000 0.00 0.00 38.73 3.57
490 491 0.651031 GCTCCGGCTCAAATTACGTC 59.349 55.000 0.00 0.00 35.22 4.34
491 492 1.739371 GCTCCGGCTCAAATTACGTCT 60.739 52.381 0.00 0.00 35.22 4.18
492 493 2.618053 CTCCGGCTCAAATTACGTCTT 58.382 47.619 0.00 0.00 0.00 3.01
493 494 2.343101 TCCGGCTCAAATTACGTCTTG 58.657 47.619 0.00 0.00 0.00 3.02
494 495 1.202031 CCGGCTCAAATTACGTCTTGC 60.202 52.381 0.00 0.00 0.00 4.01
495 496 1.202031 CGGCTCAAATTACGTCTTGCC 60.202 52.381 0.00 0.00 36.14 4.52
496 497 1.810151 GGCTCAAATTACGTCTTGCCA 59.190 47.619 0.00 0.00 38.99 4.92
497 498 2.414161 GGCTCAAATTACGTCTTGCCAC 60.414 50.000 0.00 0.00 38.99 5.01
498 499 2.724839 GCTCAAATTACGTCTTGCCACG 60.725 50.000 0.00 0.00 45.65 4.94
499 500 1.195900 TCAAATTACGTCTTGCCACGC 59.804 47.619 0.00 0.00 43.93 5.34
500 501 0.519961 AAATTACGTCTTGCCACGCC 59.480 50.000 0.00 0.00 43.93 5.68
501 502 1.303091 AATTACGTCTTGCCACGCCC 61.303 55.000 0.00 0.00 43.93 6.13
502 503 2.180159 ATTACGTCTTGCCACGCCCT 62.180 55.000 0.00 0.00 43.93 5.19
503 504 2.775032 TTACGTCTTGCCACGCCCTC 62.775 60.000 0.00 0.00 43.93 4.30
522 523 2.747460 GCTCCGCCATGTGCTCAA 60.747 61.111 0.00 0.00 38.05 3.02
523 524 3.044059 GCTCCGCCATGTGCTCAAC 62.044 63.158 0.00 0.00 38.05 3.18
524 525 1.672030 CTCCGCCATGTGCTCAACA 60.672 57.895 0.00 0.00 44.79 3.33
525 526 1.642037 CTCCGCCATGTGCTCAACAG 61.642 60.000 0.00 0.00 43.64 3.16
526 527 2.177531 CGCCATGTGCTCAACAGC 59.822 61.111 0.00 0.00 43.64 4.40
538 539 2.479566 TCAACAGCTTGAGATCCCAC 57.520 50.000 0.00 0.00 32.33 4.61
539 540 1.003580 TCAACAGCTTGAGATCCCACC 59.996 52.381 0.00 0.00 32.33 4.61
540 541 0.329596 AACAGCTTGAGATCCCACCC 59.670 55.000 0.00 0.00 0.00 4.61
541 542 0.842030 ACAGCTTGAGATCCCACCCA 60.842 55.000 0.00 0.00 0.00 4.51
542 543 0.107312 CAGCTTGAGATCCCACCCAG 60.107 60.000 0.00 0.00 0.00 4.45
543 544 1.452833 GCTTGAGATCCCACCCAGC 60.453 63.158 0.00 0.00 0.00 4.85
544 545 1.153289 CTTGAGATCCCACCCAGCG 60.153 63.158 0.00 0.00 0.00 5.18
545 546 3.329542 TTGAGATCCCACCCAGCGC 62.330 63.158 0.00 0.00 0.00 5.92
546 547 4.554036 GAGATCCCACCCAGCGCC 62.554 72.222 2.29 0.00 0.00 6.53
548 549 4.195334 GATCCCACCCAGCGCCAT 62.195 66.667 2.29 0.00 0.00 4.40
549 550 4.511246 ATCCCACCCAGCGCCATG 62.511 66.667 2.29 0.00 0.00 3.66
570 571 2.579878 GGGATCCGACTCACACTCA 58.420 57.895 5.45 0.00 0.00 3.41
571 572 0.173708 GGGATCCGACTCACACTCAC 59.826 60.000 5.45 0.00 0.00 3.51
572 573 0.173708 GGATCCGACTCACACTCACC 59.826 60.000 0.00 0.00 0.00 4.02
573 574 0.179161 GATCCGACTCACACTCACCG 60.179 60.000 0.00 0.00 0.00 4.94
574 575 1.595993 ATCCGACTCACACTCACCGG 61.596 60.000 0.00 0.00 38.41 5.28
575 576 2.430921 CGACTCACACTCACCGGC 60.431 66.667 0.00 0.00 0.00 6.13
576 577 2.734591 GACTCACACTCACCGGCA 59.265 61.111 0.00 0.00 0.00 5.69
577 578 1.293498 GACTCACACTCACCGGCAT 59.707 57.895 0.00 0.00 0.00 4.40
578 579 0.737715 GACTCACACTCACCGGCATC 60.738 60.000 0.00 0.00 0.00 3.91
587 588 1.734465 CTCACCGGCATCAAAGAAGAC 59.266 52.381 0.00 0.00 0.00 3.01
588 589 0.804989 CACCGGCATCAAAGAAGACC 59.195 55.000 0.00 0.00 0.00 3.85
601 602 7.928307 TCAAAGAAGACCAGATTATTTCCAG 57.072 36.000 0.00 0.00 0.00 3.86
602 603 7.689299 TCAAAGAAGACCAGATTATTTCCAGA 58.311 34.615 0.00 0.00 0.00 3.86
674 1267 6.119144 ACAAATCCGTTGCAATATACTCAC 57.881 37.500 0.59 0.00 41.31 3.51
694 1293 5.701224 TCACACTCCTTTATCCACCTTTTT 58.299 37.500 0.00 0.00 0.00 1.94
709 1308 5.810074 CCACCTTTTTAAGTTGTTCACAAGG 59.190 40.000 0.00 0.00 36.39 3.61
808 1408 1.541147 TCGAATCTACACCGACCGTTT 59.459 47.619 0.00 0.00 0.00 3.60
809 1409 2.030007 TCGAATCTACACCGACCGTTTT 60.030 45.455 0.00 0.00 0.00 2.43
910 1510 1.002773 GCTCCCGAACCTTACCAAAGA 59.997 52.381 0.00 0.00 34.37 2.52
991 1596 3.397439 GAGGGAGAGGCAGCAGCA 61.397 66.667 2.65 0.00 44.61 4.41
994 1599 2.667418 GGAGAGGCAGCAGCAAGA 59.333 61.111 2.65 0.00 44.61 3.02
1590 2195 1.649815 GATCGTCCTCGTGCTCGAT 59.350 57.895 11.75 12.24 45.21 3.59
1653 2261 1.966901 ATGCCGTCCACGCCAAGATA 61.967 55.000 0.00 0.00 38.18 1.98
1742 2352 2.440539 TTTCTTCCTCTGTGCTCGTC 57.559 50.000 0.00 0.00 0.00 4.20
1831 2559 1.156736 CAACCACCGGTTTAGCAGAG 58.843 55.000 2.97 0.00 44.33 3.35
1872 2600 2.416747 TCAGCATCACTTGGAGAAACG 58.583 47.619 0.00 0.00 0.00 3.60
1875 2603 1.880027 GCATCACTTGGAGAAACGGTT 59.120 47.619 0.00 0.00 0.00 4.44
1877 2605 3.853307 GCATCACTTGGAGAAACGGTTTG 60.853 47.826 11.43 0.00 0.00 2.93
1887 2615 1.463444 GAAACGGTTTGGGATCTCACG 59.537 52.381 11.43 0.00 0.00 4.35
1932 2822 2.264794 CGGTTCCGGTTGCTAGCT 59.735 61.111 17.23 0.00 0.00 3.32
1933 2823 1.375523 CGGTTCCGGTTGCTAGCTT 60.376 57.895 17.23 0.00 0.00 3.74
1934 2824 0.953960 CGGTTCCGGTTGCTAGCTTT 60.954 55.000 17.23 0.00 0.00 3.51
1960 2851 5.471456 GCTCTCTTCTTTTCCAACAATCTGA 59.529 40.000 0.00 0.00 0.00 3.27
1969 2860 9.748708 TCTTTTCCAACAATCTGAATTAACTTG 57.251 29.630 0.00 0.00 0.00 3.16
1970 2861 7.945033 TTTCCAACAATCTGAATTAACTTGC 57.055 32.000 0.00 0.00 0.00 4.01
1973 2864 7.725251 TCCAACAATCTGAATTAACTTGCTTT 58.275 30.769 0.00 0.00 0.00 3.51
2111 5067 3.947196 TGATGTGAAAGAGTGCAAGTTGT 59.053 39.130 4.48 0.00 0.00 3.32
2176 5132 0.740868 CGCAGAGATCGCAAAGGGAA 60.741 55.000 0.00 0.00 0.00 3.97
2181 5137 2.093764 AGAGATCGCAAAGGGAAGTCTG 60.094 50.000 0.00 0.00 0.00 3.51
2183 5139 2.503356 AGATCGCAAAGGGAAGTCTGAT 59.497 45.455 0.00 0.00 0.00 2.90
2184 5140 2.386661 TCGCAAAGGGAAGTCTGATC 57.613 50.000 0.00 0.00 0.00 2.92
2430 5704 8.040132 GGCATAGAGAATGACTTTAGCAGATAT 58.960 37.037 0.00 0.00 40.87 1.63
2481 5917 6.337356 ACAGTAGTACGTTCTAGTCTACTCC 58.663 44.000 6.58 0.00 39.10 3.85
2485 5921 5.587289 AGTACGTTCTAGTCTACTCCGTAG 58.413 45.833 0.00 0.00 37.47 3.51
2486 5922 4.464069 ACGTTCTAGTCTACTCCGTAGT 57.536 45.455 1.43 0.00 37.41 2.73
2487 5923 4.429108 ACGTTCTAGTCTACTCCGTAGTC 58.571 47.826 1.43 0.00 37.41 2.59
2488 5924 3.485378 CGTTCTAGTCTACTCCGTAGTCG 59.515 52.174 1.43 0.00 37.41 4.18
2501 5937 3.720949 CGTAGTCGGTATGGAAATGGA 57.279 47.619 0.00 0.00 0.00 3.41
2523 5959 2.925563 GGAATGCACTGCTTGTTTATGC 59.074 45.455 1.98 0.00 36.81 3.14
2526 5962 1.680207 TGCACTGCTTGTTTATGCACA 59.320 42.857 1.98 0.00 41.18 4.57
2527 5963 2.053627 GCACTGCTTGTTTATGCACAC 58.946 47.619 0.00 0.00 36.30 3.82
2528 5964 2.309693 CACTGCTTGTTTATGCACACG 58.690 47.619 0.00 0.00 33.87 4.49
2529 5965 1.330306 CTGCTTGTTTATGCACACGC 58.670 50.000 0.00 0.00 41.23 5.34
2541 5977 2.324860 TGCACACGCAGATATATACGC 58.675 47.619 0.00 0.17 45.36 4.42
2546 5982 1.613270 CGCAGATATATACGCGTGCA 58.387 50.000 24.59 9.83 42.66 4.57
2547 5983 2.185262 CGCAGATATATACGCGTGCAT 58.815 47.619 24.59 16.80 42.66 3.96
2624 6088 7.741502 CGAATTATTCGCCTCGTTATTTTAC 57.258 36.000 14.44 0.00 46.97 2.01
2658 6122 3.174790 GCCGTACGTGTAGGCTATG 57.825 57.895 15.21 0.00 46.83 2.23
2659 6123 0.318445 GCCGTACGTGTAGGCTATGG 60.318 60.000 15.21 5.05 46.83 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.624913 TCTCCTCTTCTCTCTCTCTCTCT 58.375 47.826 0.00 0.00 0.00 3.10
1 2 5.559148 ATCTCCTCTTCTCTCTCTCTCTC 57.441 47.826 0.00 0.00 0.00 3.20
2 3 5.688807 CAATCTCCTCTTCTCTCTCTCTCT 58.311 45.833 0.00 0.00 0.00 3.10
3 4 4.276926 GCAATCTCCTCTTCTCTCTCTCTC 59.723 50.000 0.00 0.00 0.00 3.20
4 5 4.079558 AGCAATCTCCTCTTCTCTCTCTCT 60.080 45.833 0.00 0.00 0.00 3.10
5 6 4.210331 AGCAATCTCCTCTTCTCTCTCTC 58.790 47.826 0.00 0.00 0.00 3.20
6 7 4.255510 AGCAATCTCCTCTTCTCTCTCT 57.744 45.455 0.00 0.00 0.00 3.10
7 8 4.202151 GGAAGCAATCTCCTCTTCTCTCTC 60.202 50.000 0.00 0.00 37.11 3.20
8 9 3.706086 GGAAGCAATCTCCTCTTCTCTCT 59.294 47.826 0.00 0.00 37.11 3.10
9 10 3.450457 TGGAAGCAATCTCCTCTTCTCTC 59.550 47.826 0.00 0.00 37.11 3.20
10 11 3.448934 TGGAAGCAATCTCCTCTTCTCT 58.551 45.455 0.00 0.00 37.11 3.10
11 12 3.902881 TGGAAGCAATCTCCTCTTCTC 57.097 47.619 0.00 0.00 37.11 2.87
12 13 3.586618 ACTTGGAAGCAATCTCCTCTTCT 59.413 43.478 0.00 0.00 37.11 2.85
13 14 3.938334 GACTTGGAAGCAATCTCCTCTTC 59.062 47.826 0.00 0.00 36.42 2.87
14 15 3.308046 GGACTTGGAAGCAATCTCCTCTT 60.308 47.826 0.00 0.00 0.00 2.85
15 16 2.238395 GGACTTGGAAGCAATCTCCTCT 59.762 50.000 0.00 0.00 0.00 3.69
16 17 2.238395 AGGACTTGGAAGCAATCTCCTC 59.762 50.000 0.00 0.00 0.00 3.71
17 18 2.238395 GAGGACTTGGAAGCAATCTCCT 59.762 50.000 0.00 0.00 0.00 3.69
18 19 2.026822 TGAGGACTTGGAAGCAATCTCC 60.027 50.000 0.00 0.00 0.00 3.71
19 20 3.340814 TGAGGACTTGGAAGCAATCTC 57.659 47.619 0.00 0.00 0.00 2.75
20 21 3.416156 GTTGAGGACTTGGAAGCAATCT 58.584 45.455 0.00 0.00 0.00 2.40
21 22 2.160417 CGTTGAGGACTTGGAAGCAATC 59.840 50.000 0.00 0.00 0.00 2.67
22 23 2.154462 CGTTGAGGACTTGGAAGCAAT 58.846 47.619 0.00 0.00 0.00 3.56
23 24 1.140052 TCGTTGAGGACTTGGAAGCAA 59.860 47.619 0.00 0.00 0.00 3.91
24 25 0.756294 TCGTTGAGGACTTGGAAGCA 59.244 50.000 0.00 0.00 0.00 3.91
25 26 1.149148 GTCGTTGAGGACTTGGAAGC 58.851 55.000 0.00 0.00 34.09 3.86
26 27 2.408050 CAGTCGTTGAGGACTTGGAAG 58.592 52.381 3.76 0.00 44.65 3.46
27 28 1.540363 GCAGTCGTTGAGGACTTGGAA 60.540 52.381 3.76 0.00 44.65 3.53
28 29 0.033504 GCAGTCGTTGAGGACTTGGA 59.966 55.000 3.76 0.00 44.65 3.53
29 30 0.034059 AGCAGTCGTTGAGGACTTGG 59.966 55.000 3.76 0.00 44.65 3.61
30 31 2.029828 ACTAGCAGTCGTTGAGGACTTG 60.030 50.000 3.76 2.47 44.65 3.16
31 32 2.029828 CACTAGCAGTCGTTGAGGACTT 60.030 50.000 3.76 0.00 44.65 3.01
33 34 1.540267 TCACTAGCAGTCGTTGAGGAC 59.460 52.381 0.00 0.00 37.19 3.85
34 35 1.905637 TCACTAGCAGTCGTTGAGGA 58.094 50.000 0.00 0.00 0.00 3.71
35 36 2.949451 ATCACTAGCAGTCGTTGAGG 57.051 50.000 0.00 0.00 0.00 3.86
36 37 4.733850 TGTAATCACTAGCAGTCGTTGAG 58.266 43.478 0.00 0.00 0.00 3.02
37 38 4.776795 TGTAATCACTAGCAGTCGTTGA 57.223 40.909 0.00 0.00 0.00 3.18
38 39 4.923871 ACTTGTAATCACTAGCAGTCGTTG 59.076 41.667 0.00 0.00 31.53 4.10
39 40 5.135508 ACTTGTAATCACTAGCAGTCGTT 57.864 39.130 0.00 0.00 31.53 3.85
40 41 4.785511 ACTTGTAATCACTAGCAGTCGT 57.214 40.909 0.00 0.00 31.53 4.34
41 42 4.923871 ACAACTTGTAATCACTAGCAGTCG 59.076 41.667 0.00 0.00 31.53 4.18
42 43 5.061064 CGACAACTTGTAATCACTAGCAGTC 59.939 44.000 0.00 0.00 34.43 3.51
43 44 4.923871 CGACAACTTGTAATCACTAGCAGT 59.076 41.667 0.00 0.00 31.53 4.40
44 45 4.201628 GCGACAACTTGTAATCACTAGCAG 60.202 45.833 0.00 0.00 31.53 4.24
45 46 3.678072 GCGACAACTTGTAATCACTAGCA 59.322 43.478 0.00 0.00 31.53 3.49
46 47 3.062234 GGCGACAACTTGTAATCACTAGC 59.938 47.826 0.00 0.00 31.53 3.42
47 48 4.327357 CAGGCGACAACTTGTAATCACTAG 59.673 45.833 0.00 0.00 34.19 2.57
48 49 4.021807 TCAGGCGACAACTTGTAATCACTA 60.022 41.667 0.00 0.00 0.00 2.74
49 50 3.067106 CAGGCGACAACTTGTAATCACT 58.933 45.455 0.00 0.00 0.00 3.41
50 51 3.064207 TCAGGCGACAACTTGTAATCAC 58.936 45.455 0.00 0.00 0.00 3.06
51 52 3.064207 GTCAGGCGACAACTTGTAATCA 58.936 45.455 0.00 0.00 42.13 2.57
52 53 2.415512 GGTCAGGCGACAACTTGTAATC 59.584 50.000 10.67 0.00 44.54 1.75
53 54 2.423577 GGTCAGGCGACAACTTGTAAT 58.576 47.619 10.67 0.00 44.54 1.89
54 55 1.870580 CGGTCAGGCGACAACTTGTAA 60.871 52.381 10.67 0.00 44.54 2.41
55 56 0.319211 CGGTCAGGCGACAACTTGTA 60.319 55.000 10.67 0.00 44.54 2.41
56 57 1.594293 CGGTCAGGCGACAACTTGT 60.594 57.895 10.67 0.00 44.54 3.16
57 58 2.317609 CCGGTCAGGCGACAACTTG 61.318 63.158 10.67 0.00 44.54 3.16
58 59 2.030562 CCGGTCAGGCGACAACTT 59.969 61.111 10.67 0.00 44.54 2.66
59 60 3.231736 ACCGGTCAGGCGACAACT 61.232 61.111 0.00 0.00 46.52 3.16
60 61 3.041940 CACCGGTCAGGCGACAAC 61.042 66.667 2.59 0.00 46.52 3.32
61 62 3.509137 GACACCGGTCAGGCGACAA 62.509 63.158 2.59 0.00 46.52 3.18
62 63 3.986006 GACACCGGTCAGGCGACA 61.986 66.667 2.59 0.00 46.52 4.35
70 71 2.046314 CCCACCATGACACCGGTC 60.046 66.667 2.59 0.00 44.57 4.79
71 72 4.344865 GCCCACCATGACACCGGT 62.345 66.667 0.00 0.00 35.27 5.28
73 74 4.343323 TGGCCCACCATGACACCG 62.343 66.667 0.00 0.00 42.67 4.94
81 82 1.485294 ATACGAGTTGTGGCCCACCA 61.485 55.000 12.25 0.00 46.51 4.17
82 83 0.322187 AATACGAGTTGTGGCCCACC 60.322 55.000 12.25 0.00 32.73 4.61
83 84 1.084289 GAATACGAGTTGTGGCCCAC 58.916 55.000 7.01 7.01 34.56 4.61
84 85 0.687920 TGAATACGAGTTGTGGCCCA 59.312 50.000 0.00 0.00 0.00 5.36
85 86 1.084289 GTGAATACGAGTTGTGGCCC 58.916 55.000 0.00 0.00 0.00 5.80
86 87 1.084289 GGTGAATACGAGTTGTGGCC 58.916 55.000 0.00 0.00 0.00 5.36
87 88 0.719465 CGGTGAATACGAGTTGTGGC 59.281 55.000 0.00 0.00 0.00 5.01
88 89 1.337447 ACCGGTGAATACGAGTTGTGG 60.337 52.381 6.12 0.00 0.00 4.17
89 90 2.074547 ACCGGTGAATACGAGTTGTG 57.925 50.000 6.12 0.00 0.00 3.33
90 91 2.094545 GGTACCGGTGAATACGAGTTGT 60.095 50.000 19.93 0.00 0.00 3.32
91 92 2.533266 GGTACCGGTGAATACGAGTTG 58.467 52.381 19.93 0.00 0.00 3.16
92 93 1.133025 CGGTACCGGTGAATACGAGTT 59.867 52.381 27.00 0.00 35.56 3.01
93 94 0.734889 CGGTACCGGTGAATACGAGT 59.265 55.000 27.00 0.00 35.56 4.18
94 95 1.016627 TCGGTACCGGTGAATACGAG 58.983 55.000 32.80 5.21 40.25 4.18
95 96 1.401552 CTTCGGTACCGGTGAATACGA 59.598 52.381 32.80 16.20 40.25 3.43
96 97 1.401552 TCTTCGGTACCGGTGAATACG 59.598 52.381 32.80 14.09 40.25 3.06
97 98 3.129287 TCTTCTTCGGTACCGGTGAATAC 59.871 47.826 32.80 7.08 40.25 1.89
98 99 3.355378 TCTTCTTCGGTACCGGTGAATA 58.645 45.455 32.80 23.42 40.25 1.75
99 100 2.173519 TCTTCTTCGGTACCGGTGAAT 58.826 47.619 32.80 0.00 40.25 2.57
100 101 1.619654 TCTTCTTCGGTACCGGTGAA 58.380 50.000 32.80 29.78 40.25 3.18
101 102 1.475280 CATCTTCTTCGGTACCGGTGA 59.525 52.381 32.80 25.86 40.25 4.02
102 103 1.475280 TCATCTTCTTCGGTACCGGTG 59.525 52.381 32.80 24.16 40.25 4.94
103 104 1.749634 CTCATCTTCTTCGGTACCGGT 59.250 52.381 32.80 13.98 40.25 5.28
104 105 1.749634 ACTCATCTTCTTCGGTACCGG 59.250 52.381 32.80 18.64 40.25 5.28
105 106 2.422479 TCACTCATCTTCTTCGGTACCG 59.578 50.000 28.66 28.66 41.35 4.02
106 107 3.695060 TCTCACTCATCTTCTTCGGTACC 59.305 47.826 0.16 0.16 0.00 3.34
107 108 4.636648 TCTCTCACTCATCTTCTTCGGTAC 59.363 45.833 0.00 0.00 0.00 3.34
108 109 4.844884 TCTCTCACTCATCTTCTTCGGTA 58.155 43.478 0.00 0.00 0.00 4.02
109 110 3.691575 TCTCTCACTCATCTTCTTCGGT 58.308 45.455 0.00 0.00 0.00 4.69
110 111 4.397730 TCTTCTCTCACTCATCTTCTTCGG 59.602 45.833 0.00 0.00 0.00 4.30
111 112 5.449041 CCTCTTCTCTCACTCATCTTCTTCG 60.449 48.000 0.00 0.00 0.00 3.79
112 113 5.652014 TCCTCTTCTCTCACTCATCTTCTTC 59.348 44.000 0.00 0.00 0.00 2.87
113 114 5.579047 TCCTCTTCTCTCACTCATCTTCTT 58.421 41.667 0.00 0.00 0.00 2.52
114 115 5.044919 TCTCCTCTTCTCTCACTCATCTTCT 60.045 44.000 0.00 0.00 0.00 2.85
115 116 5.192927 TCTCCTCTTCTCTCACTCATCTTC 58.807 45.833 0.00 0.00 0.00 2.87
116 117 5.191727 TCTCCTCTTCTCTCACTCATCTT 57.808 43.478 0.00 0.00 0.00 2.40
117 118 4.860802 TCTCCTCTTCTCTCACTCATCT 57.139 45.455 0.00 0.00 0.00 2.90
118 119 5.360714 ACAATCTCCTCTTCTCTCACTCATC 59.639 44.000 0.00 0.00 0.00 2.92
119 120 5.271598 ACAATCTCCTCTTCTCTCACTCAT 58.728 41.667 0.00 0.00 0.00 2.90
120 121 4.671831 ACAATCTCCTCTTCTCTCACTCA 58.328 43.478 0.00 0.00 0.00 3.41
121 122 5.659440 AACAATCTCCTCTTCTCTCACTC 57.341 43.478 0.00 0.00 0.00 3.51
122 123 5.046663 GGAAACAATCTCCTCTTCTCTCACT 60.047 44.000 0.00 0.00 0.00 3.41
123 124 5.175127 GGAAACAATCTCCTCTTCTCTCAC 58.825 45.833 0.00 0.00 0.00 3.51
124 125 4.840680 TGGAAACAATCTCCTCTTCTCTCA 59.159 41.667 0.00 0.00 37.44 3.27
125 126 5.413309 TGGAAACAATCTCCTCTTCTCTC 57.587 43.478 0.00 0.00 37.44 3.20
154 155 4.681074 ATTCACCAACAATCGGGTTTTT 57.319 36.364 0.00 0.00 34.45 1.94
155 156 4.100189 TGAATTCACCAACAATCGGGTTTT 59.900 37.500 3.38 0.00 34.45 2.43
156 157 3.639094 TGAATTCACCAACAATCGGGTTT 59.361 39.130 3.38 0.00 34.45 3.27
157 158 3.226777 TGAATTCACCAACAATCGGGTT 58.773 40.909 3.38 0.00 34.45 4.11
158 159 2.870175 TGAATTCACCAACAATCGGGT 58.130 42.857 3.38 0.00 38.10 5.28
159 160 3.932545 TTGAATTCACCAACAATCGGG 57.067 42.857 7.89 0.00 0.00 5.14
160 161 6.783892 AAAATTGAATTCACCAACAATCGG 57.216 33.333 7.89 0.00 32.84 4.18
161 162 8.519492 ACTAAAATTGAATTCACCAACAATCG 57.481 30.769 7.89 0.00 32.84 3.34
187 188 9.371136 TGCAACAGATTTGTTAATTTTGTGTAA 57.629 25.926 0.64 0.00 45.53 2.41
188 189 8.932945 TGCAACAGATTTGTTAATTTTGTGTA 57.067 26.923 0.64 0.00 45.53 2.90
189 190 7.840342 TGCAACAGATTTGTTAATTTTGTGT 57.160 28.000 0.64 0.00 45.53 3.72
232 233 8.762645 TCAAGAGACTAATTTGATGTCCTACAT 58.237 33.333 0.00 0.00 42.43 2.29
233 234 8.134202 TCAAGAGACTAATTTGATGTCCTACA 57.866 34.615 0.00 0.00 0.00 2.74
234 235 8.470805 TCTCAAGAGACTAATTTGATGTCCTAC 58.529 37.037 0.00 0.00 31.11 3.18
235 236 8.595362 TCTCAAGAGACTAATTTGATGTCCTA 57.405 34.615 0.00 0.00 31.11 2.94
236 237 7.487822 TCTCAAGAGACTAATTTGATGTCCT 57.512 36.000 0.00 0.00 31.11 3.85
237 238 8.729805 AATCTCAAGAGACTAATTTGATGTCC 57.270 34.615 1.20 0.00 40.75 4.02
239 240 9.956640 AGAAATCTCAAGAGACTAATTTGATGT 57.043 29.630 1.20 0.00 40.75 3.06
249 250 8.257306 GGATGACTAAAGAAATCTCAAGAGACT 58.743 37.037 1.20 0.00 40.75 3.24
250 251 8.257306 AGGATGACTAAAGAAATCTCAAGAGAC 58.743 37.037 1.20 0.00 40.75 3.36
251 252 8.372877 AGGATGACTAAAGAAATCTCAAGAGA 57.627 34.615 1.74 1.74 42.37 3.10
252 253 7.434897 CGAGGATGACTAAAGAAATCTCAAGAG 59.565 40.741 0.00 0.00 0.00 2.85
253 254 7.261325 CGAGGATGACTAAAGAAATCTCAAGA 58.739 38.462 0.00 0.00 0.00 3.02
254 255 6.019156 GCGAGGATGACTAAAGAAATCTCAAG 60.019 42.308 0.00 0.00 0.00 3.02
255 256 5.812642 GCGAGGATGACTAAAGAAATCTCAA 59.187 40.000 0.00 0.00 0.00 3.02
256 257 5.127845 AGCGAGGATGACTAAAGAAATCTCA 59.872 40.000 0.00 0.00 0.00 3.27
257 258 5.596845 AGCGAGGATGACTAAAGAAATCTC 58.403 41.667 0.00 0.00 0.00 2.75
258 259 5.362430 AGAGCGAGGATGACTAAAGAAATCT 59.638 40.000 0.00 0.00 0.00 2.40
259 260 5.596845 AGAGCGAGGATGACTAAAGAAATC 58.403 41.667 0.00 0.00 0.00 2.17
260 261 5.606348 AGAGCGAGGATGACTAAAGAAAT 57.394 39.130 0.00 0.00 0.00 2.17
261 262 5.407407 AAGAGCGAGGATGACTAAAGAAA 57.593 39.130 0.00 0.00 0.00 2.52
262 263 6.716934 ATAAGAGCGAGGATGACTAAAGAA 57.283 37.500 0.00 0.00 0.00 2.52
263 264 6.239064 GGAATAAGAGCGAGGATGACTAAAGA 60.239 42.308 0.00 0.00 0.00 2.52
264 265 5.923684 GGAATAAGAGCGAGGATGACTAAAG 59.076 44.000 0.00 0.00 0.00 1.85
265 266 5.598830 AGGAATAAGAGCGAGGATGACTAAA 59.401 40.000 0.00 0.00 0.00 1.85
266 267 5.141182 AGGAATAAGAGCGAGGATGACTAA 58.859 41.667 0.00 0.00 0.00 2.24
267 268 4.730966 AGGAATAAGAGCGAGGATGACTA 58.269 43.478 0.00 0.00 0.00 2.59
268 269 3.571590 AGGAATAAGAGCGAGGATGACT 58.428 45.455 0.00 0.00 0.00 3.41
269 270 3.305744 GGAGGAATAAGAGCGAGGATGAC 60.306 52.174 0.00 0.00 0.00 3.06
270 271 2.894126 GGAGGAATAAGAGCGAGGATGA 59.106 50.000 0.00 0.00 0.00 2.92
271 272 2.352225 CGGAGGAATAAGAGCGAGGATG 60.352 54.545 0.00 0.00 0.00 3.51
272 273 1.889829 CGGAGGAATAAGAGCGAGGAT 59.110 52.381 0.00 0.00 0.00 3.24
273 274 1.319541 CGGAGGAATAAGAGCGAGGA 58.680 55.000 0.00 0.00 0.00 3.71
274 275 1.033574 ACGGAGGAATAAGAGCGAGG 58.966 55.000 0.00 0.00 0.00 4.63
275 276 2.873133 AACGGAGGAATAAGAGCGAG 57.127 50.000 0.00 0.00 0.00 5.03
276 277 2.479049 CGAAACGGAGGAATAAGAGCGA 60.479 50.000 0.00 0.00 0.00 4.93
277 278 1.852895 CGAAACGGAGGAATAAGAGCG 59.147 52.381 0.00 0.00 0.00 5.03
278 279 2.858941 GACGAAACGGAGGAATAAGAGC 59.141 50.000 0.00 0.00 0.00 4.09
279 280 3.106672 CGACGAAACGGAGGAATAAGAG 58.893 50.000 0.00 0.00 0.00 2.85
280 281 3.141002 CGACGAAACGGAGGAATAAGA 57.859 47.619 0.00 0.00 0.00 2.10
291 292 1.143969 GGTATGGAGCCGACGAAACG 61.144 60.000 0.00 0.00 0.00 3.60
292 293 0.108520 TGGTATGGAGCCGACGAAAC 60.109 55.000 0.00 0.00 0.00 2.78
293 294 0.828022 ATGGTATGGAGCCGACGAAA 59.172 50.000 0.00 0.00 0.00 3.46
294 295 0.387929 GATGGTATGGAGCCGACGAA 59.612 55.000 0.00 0.00 0.00 3.85
295 296 0.467474 AGATGGTATGGAGCCGACGA 60.467 55.000 0.00 0.00 0.00 4.20
296 297 1.200252 CTAGATGGTATGGAGCCGACG 59.800 57.143 0.00 0.00 0.00 5.12
297 298 2.240279 ACTAGATGGTATGGAGCCGAC 58.760 52.381 0.00 0.00 0.00 4.79
298 299 2.677542 ACTAGATGGTATGGAGCCGA 57.322 50.000 0.00 0.00 0.00 5.54
299 300 3.393800 CAAACTAGATGGTATGGAGCCG 58.606 50.000 0.00 0.00 0.00 5.52
300 301 3.744660 CCAAACTAGATGGTATGGAGCC 58.255 50.000 0.00 0.00 33.08 4.70
309 310 1.463674 GTGGCCACCAAACTAGATGG 58.536 55.000 26.31 15.02 43.84 3.51
322 323 4.555709 AACAAGCGACGGTGGCCA 62.556 61.111 11.66 0.00 0.00 5.36
323 324 3.723348 GAACAAGCGACGGTGGCC 61.723 66.667 11.66 0.00 0.00 5.36
324 325 2.054140 TTTGAACAAGCGACGGTGGC 62.054 55.000 7.06 7.06 0.00 5.01
325 326 0.316689 GTTTGAACAAGCGACGGTGG 60.317 55.000 0.00 0.00 0.00 4.61
326 327 0.375454 TGTTTGAACAAGCGACGGTG 59.625 50.000 0.00 0.00 35.67 4.94
327 328 1.088306 TTGTTTGAACAAGCGACGGT 58.912 45.000 5.25 0.00 43.45 4.83
328 329 3.907927 TTGTTTGAACAAGCGACGG 57.092 47.368 5.25 0.00 43.45 4.79
336 337 6.697892 GGATGGTTTAACGAATTGTTTGAACA 59.302 34.615 11.67 0.00 42.09 3.18
337 338 6.144886 GGGATGGTTTAACGAATTGTTTGAAC 59.855 38.462 0.00 0.00 42.09 3.18
338 339 6.217294 GGGATGGTTTAACGAATTGTTTGAA 58.783 36.000 0.00 0.00 42.09 2.69
339 340 5.279056 GGGGATGGTTTAACGAATTGTTTGA 60.279 40.000 0.00 0.00 42.09 2.69
340 341 4.926832 GGGGATGGTTTAACGAATTGTTTG 59.073 41.667 0.00 0.00 42.09 2.93
341 342 4.589374 TGGGGATGGTTTAACGAATTGTTT 59.411 37.500 0.00 0.00 42.09 2.83
342 343 4.153411 TGGGGATGGTTTAACGAATTGTT 58.847 39.130 0.00 0.00 44.78 2.83
343 344 3.761752 CTGGGGATGGTTTAACGAATTGT 59.238 43.478 0.00 0.00 0.00 2.71
344 345 3.761752 ACTGGGGATGGTTTAACGAATTG 59.238 43.478 0.00 0.00 0.00 2.32
345 346 4.042271 ACTGGGGATGGTTTAACGAATT 57.958 40.909 0.00 0.00 0.00 2.17
346 347 3.732048 ACTGGGGATGGTTTAACGAAT 57.268 42.857 0.00 0.00 0.00 3.34
347 348 3.512219 AACTGGGGATGGTTTAACGAA 57.488 42.857 0.00 0.00 0.00 3.85
348 349 3.512219 AAACTGGGGATGGTTTAACGA 57.488 42.857 0.00 0.00 0.00 3.85
349 350 3.441222 GGTAAACTGGGGATGGTTTAACG 59.559 47.826 0.00 0.00 0.00 3.18
350 351 3.441222 CGGTAAACTGGGGATGGTTTAAC 59.559 47.826 0.00 0.00 0.00 2.01
351 352 3.330110 TCGGTAAACTGGGGATGGTTTAA 59.670 43.478 0.00 0.00 0.00 1.52
352 353 2.911636 TCGGTAAACTGGGGATGGTTTA 59.088 45.455 0.00 0.00 0.00 2.01
353 354 1.706305 TCGGTAAACTGGGGATGGTTT 59.294 47.619 0.00 0.00 0.00 3.27
354 355 1.364269 TCGGTAAACTGGGGATGGTT 58.636 50.000 0.00 0.00 0.00 3.67
355 356 1.211949 CATCGGTAAACTGGGGATGGT 59.788 52.381 0.00 0.00 32.79 3.55
356 357 1.488812 TCATCGGTAAACTGGGGATGG 59.511 52.381 0.00 0.00 36.15 3.51
357 358 2.170607 AGTCATCGGTAAACTGGGGATG 59.829 50.000 0.00 0.00 36.66 3.51
358 359 2.434702 GAGTCATCGGTAAACTGGGGAT 59.565 50.000 0.00 0.00 0.00 3.85
359 360 1.829222 GAGTCATCGGTAAACTGGGGA 59.171 52.381 0.00 0.00 0.00 4.81
360 361 1.134491 GGAGTCATCGGTAAACTGGGG 60.134 57.143 0.00 0.00 0.00 4.96
361 362 1.831736 AGGAGTCATCGGTAAACTGGG 59.168 52.381 0.00 0.00 0.00 4.45
362 363 3.522553 GAAGGAGTCATCGGTAAACTGG 58.477 50.000 0.00 0.00 0.00 4.00
363 364 3.179830 CGAAGGAGTCATCGGTAAACTG 58.820 50.000 9.11 0.00 35.49 3.16
364 365 2.824341 ACGAAGGAGTCATCGGTAAACT 59.176 45.455 18.20 0.00 43.11 2.66
365 366 3.119566 AGACGAAGGAGTCATCGGTAAAC 60.120 47.826 18.20 7.32 43.24 2.01
366 367 3.087031 AGACGAAGGAGTCATCGGTAAA 58.913 45.455 18.20 0.00 43.24 2.01
367 368 2.681848 GAGACGAAGGAGTCATCGGTAA 59.318 50.000 18.20 0.00 43.24 2.85
368 369 2.286872 GAGACGAAGGAGTCATCGGTA 58.713 52.381 18.20 0.00 43.24 4.02
369 370 1.096416 GAGACGAAGGAGTCATCGGT 58.904 55.000 18.20 8.00 43.24 4.69
370 371 1.095600 TGAGACGAAGGAGTCATCGG 58.904 55.000 18.20 0.00 43.24 4.18
371 372 2.917971 GTTTGAGACGAAGGAGTCATCG 59.082 50.000 13.98 13.98 43.24 3.84
372 373 3.254892 GGTTTGAGACGAAGGAGTCATC 58.745 50.000 0.00 0.00 43.24 2.92
373 374 2.028020 GGGTTTGAGACGAAGGAGTCAT 60.028 50.000 0.00 0.00 43.24 3.06
374 375 1.343465 GGGTTTGAGACGAAGGAGTCA 59.657 52.381 0.00 0.00 43.24 3.41
375 376 1.619332 AGGGTTTGAGACGAAGGAGTC 59.381 52.381 0.00 0.00 41.23 3.36
376 377 1.718280 AGGGTTTGAGACGAAGGAGT 58.282 50.000 0.00 0.00 0.00 3.85
377 378 3.955650 TTAGGGTTTGAGACGAAGGAG 57.044 47.619 0.00 0.00 0.00 3.69
378 379 4.094476 AGATTAGGGTTTGAGACGAAGGA 58.906 43.478 0.00 0.00 0.00 3.36
379 380 4.473477 AGATTAGGGTTTGAGACGAAGG 57.527 45.455 0.00 0.00 0.00 3.46
380 381 6.313164 GGTTTAGATTAGGGTTTGAGACGAAG 59.687 42.308 0.00 0.00 0.00 3.79
381 382 6.168389 GGTTTAGATTAGGGTTTGAGACGAA 58.832 40.000 0.00 0.00 0.00 3.85
382 383 5.337813 GGGTTTAGATTAGGGTTTGAGACGA 60.338 44.000 0.00 0.00 0.00 4.20
383 384 4.874396 GGGTTTAGATTAGGGTTTGAGACG 59.126 45.833 0.00 0.00 0.00 4.18
384 385 5.880887 CAGGGTTTAGATTAGGGTTTGAGAC 59.119 44.000 0.00 0.00 0.00 3.36
385 386 5.788533 TCAGGGTTTAGATTAGGGTTTGAGA 59.211 40.000 0.00 0.00 0.00 3.27
386 387 5.880887 GTCAGGGTTTAGATTAGGGTTTGAG 59.119 44.000 0.00 0.00 0.00 3.02
387 388 5.280830 GGTCAGGGTTTAGATTAGGGTTTGA 60.281 44.000 0.00 0.00 0.00 2.69
388 389 4.948004 GGTCAGGGTTTAGATTAGGGTTTG 59.052 45.833 0.00 0.00 0.00 2.93
389 390 4.017775 GGGTCAGGGTTTAGATTAGGGTTT 60.018 45.833 0.00 0.00 0.00 3.27
390 391 3.526430 GGGTCAGGGTTTAGATTAGGGTT 59.474 47.826 0.00 0.00 0.00 4.11
391 392 3.120898 GGGTCAGGGTTTAGATTAGGGT 58.879 50.000 0.00 0.00 0.00 4.34
392 393 3.120108 TGGGTCAGGGTTTAGATTAGGG 58.880 50.000 0.00 0.00 0.00 3.53
393 394 4.660771 AGATGGGTCAGGGTTTAGATTAGG 59.339 45.833 0.00 0.00 0.00 2.69
394 395 5.366768 TGAGATGGGTCAGGGTTTAGATTAG 59.633 44.000 0.00 0.00 0.00 1.73
395 396 5.285401 TGAGATGGGTCAGGGTTTAGATTA 58.715 41.667 0.00 0.00 0.00 1.75
396 397 4.111577 TGAGATGGGTCAGGGTTTAGATT 58.888 43.478 0.00 0.00 0.00 2.40
397 398 3.736094 TGAGATGGGTCAGGGTTTAGAT 58.264 45.455 0.00 0.00 0.00 1.98
398 399 3.199442 TGAGATGGGTCAGGGTTTAGA 57.801 47.619 0.00 0.00 0.00 2.10
399 400 3.264450 ACTTGAGATGGGTCAGGGTTTAG 59.736 47.826 0.00 0.00 0.00 1.85
400 401 3.256704 ACTTGAGATGGGTCAGGGTTTA 58.743 45.455 0.00 0.00 0.00 2.01
401 402 2.065799 ACTTGAGATGGGTCAGGGTTT 58.934 47.619 0.00 0.00 0.00 3.27
402 403 1.747444 ACTTGAGATGGGTCAGGGTT 58.253 50.000 0.00 0.00 0.00 4.11
403 404 1.747444 AACTTGAGATGGGTCAGGGT 58.253 50.000 0.00 0.00 0.00 4.34
404 405 2.887151 AAACTTGAGATGGGTCAGGG 57.113 50.000 0.00 0.00 0.00 4.45
405 406 5.770162 AGTTTTAAACTTGAGATGGGTCAGG 59.230 40.000 4.30 0.00 39.04 3.86
406 407 6.672147 CAGTTTTAAACTTGAGATGGGTCAG 58.328 40.000 7.71 0.00 40.46 3.51
407 408 5.009610 GCAGTTTTAAACTTGAGATGGGTCA 59.990 40.000 7.71 0.00 40.46 4.02
408 409 5.461526 GCAGTTTTAAACTTGAGATGGGTC 58.538 41.667 7.71 0.00 40.46 4.46
409 410 4.280929 GGCAGTTTTAAACTTGAGATGGGT 59.719 41.667 7.71 0.00 40.46 4.51
410 411 4.321974 GGGCAGTTTTAAACTTGAGATGGG 60.322 45.833 7.71 0.00 40.46 4.00
411 412 4.321974 GGGGCAGTTTTAAACTTGAGATGG 60.322 45.833 7.71 0.00 40.46 3.51
412 413 4.615912 CGGGGCAGTTTTAAACTTGAGATG 60.616 45.833 7.71 0.00 40.46 2.90
413 414 3.506067 CGGGGCAGTTTTAAACTTGAGAT 59.494 43.478 7.71 0.00 40.46 2.75
414 415 2.882137 CGGGGCAGTTTTAAACTTGAGA 59.118 45.455 7.71 0.00 40.46 3.27
415 416 2.607038 GCGGGGCAGTTTTAAACTTGAG 60.607 50.000 7.71 0.00 40.46 3.02
416 417 1.338655 GCGGGGCAGTTTTAAACTTGA 59.661 47.619 7.71 0.00 40.46 3.02
417 418 1.604438 GGCGGGGCAGTTTTAAACTTG 60.604 52.381 7.71 5.44 40.46 3.16
418 419 0.677288 GGCGGGGCAGTTTTAAACTT 59.323 50.000 7.71 0.00 40.46 2.66
419 420 1.183030 GGGCGGGGCAGTTTTAAACT 61.183 55.000 4.30 4.30 44.06 2.66
420 421 1.290955 GGGCGGGGCAGTTTTAAAC 59.709 57.895 0.00 0.00 0.00 2.01
421 422 1.909287 GGGGCGGGGCAGTTTTAAA 60.909 57.895 0.00 0.00 0.00 1.52
422 423 2.283316 GGGGCGGGGCAGTTTTAA 60.283 61.111 0.00 0.00 0.00 1.52
423 424 4.369837 GGGGGCGGGGCAGTTTTA 62.370 66.667 0.00 0.00 0.00 1.52
432 433 4.694987 ATTGTTGGTGGGGGCGGG 62.695 66.667 0.00 0.00 0.00 6.13
433 434 3.381136 CATTGTTGGTGGGGGCGG 61.381 66.667 0.00 0.00 0.00 6.13
434 435 4.067913 GCATTGTTGGTGGGGGCG 62.068 66.667 0.00 0.00 0.00 6.13
435 436 1.304879 TAGCATTGTTGGTGGGGGC 60.305 57.895 0.00 0.00 34.79 5.80
436 437 0.684153 CCTAGCATTGTTGGTGGGGG 60.684 60.000 0.16 0.00 45.41 5.40
437 438 2.886382 CCTAGCATTGTTGGTGGGG 58.114 57.895 0.16 0.00 45.41 4.96
439 440 1.656818 CGGCCTAGCATTGTTGGTGG 61.657 60.000 0.00 0.00 34.79 4.61
440 441 1.656818 CCGGCCTAGCATTGTTGGTG 61.657 60.000 0.00 0.00 34.79 4.17
441 442 1.378514 CCGGCCTAGCATTGTTGGT 60.379 57.895 0.00 0.00 37.36 3.67
442 443 1.378514 ACCGGCCTAGCATTGTTGG 60.379 57.895 0.00 0.00 0.00 3.77
443 444 0.960364 ACACCGGCCTAGCATTGTTG 60.960 55.000 0.00 0.00 0.00 3.33
444 445 0.676782 GACACCGGCCTAGCATTGTT 60.677 55.000 0.00 0.00 0.00 2.83
445 446 1.078426 GACACCGGCCTAGCATTGT 60.078 57.895 0.00 0.00 0.00 2.71
446 447 0.464373 ATGACACCGGCCTAGCATTG 60.464 55.000 0.00 0.00 0.00 2.82
447 448 0.255890 AATGACACCGGCCTAGCATT 59.744 50.000 0.00 1.85 0.00 3.56
448 449 0.464373 CAATGACACCGGCCTAGCAT 60.464 55.000 0.00 0.00 0.00 3.79
449 450 1.078497 CAATGACACCGGCCTAGCA 60.078 57.895 0.00 0.00 0.00 3.49
450 451 0.676782 AACAATGACACCGGCCTAGC 60.677 55.000 0.00 0.00 0.00 3.42
451 452 1.086696 CAACAATGACACCGGCCTAG 58.913 55.000 0.00 0.00 0.00 3.02
452 453 0.322098 CCAACAATGACACCGGCCTA 60.322 55.000 0.00 0.00 0.00 3.93
453 454 1.603455 CCAACAATGACACCGGCCT 60.603 57.895 0.00 0.00 0.00 5.19
454 455 2.961768 CCAACAATGACACCGGCC 59.038 61.111 0.00 0.00 0.00 6.13
455 456 2.200170 GAGCCAACAATGACACCGGC 62.200 60.000 0.00 0.00 39.90 6.13
456 457 1.586154 GGAGCCAACAATGACACCGG 61.586 60.000 0.00 0.00 0.00 5.28
457 458 1.875963 GGAGCCAACAATGACACCG 59.124 57.895 0.00 0.00 0.00 4.94
458 459 1.586154 CCGGAGCCAACAATGACACC 61.586 60.000 0.00 0.00 0.00 4.16
459 460 1.875963 CCGGAGCCAACAATGACAC 59.124 57.895 0.00 0.00 0.00 3.67
460 461 1.971167 GCCGGAGCCAACAATGACA 60.971 57.895 5.05 0.00 0.00 3.58
461 462 1.648467 GAGCCGGAGCCAACAATGAC 61.648 60.000 5.05 0.00 41.25 3.06
462 463 1.377202 GAGCCGGAGCCAACAATGA 60.377 57.895 5.05 0.00 41.25 2.57
463 464 1.243342 TTGAGCCGGAGCCAACAATG 61.243 55.000 5.05 0.00 41.25 2.82
464 465 0.539438 TTTGAGCCGGAGCCAACAAT 60.539 50.000 5.05 0.00 41.25 2.71
465 466 0.539438 ATTTGAGCCGGAGCCAACAA 60.539 50.000 5.05 0.00 41.25 2.83
466 467 0.539438 AATTTGAGCCGGAGCCAACA 60.539 50.000 5.05 0.00 41.25 3.33
467 468 1.132453 GTAATTTGAGCCGGAGCCAAC 59.868 52.381 5.05 0.00 41.25 3.77
468 469 1.459450 GTAATTTGAGCCGGAGCCAA 58.541 50.000 5.05 2.01 41.25 4.52
469 470 0.742990 CGTAATTTGAGCCGGAGCCA 60.743 55.000 5.05 0.00 41.25 4.75
470 471 0.743345 ACGTAATTTGAGCCGGAGCC 60.743 55.000 5.05 0.00 41.25 4.70
471 472 0.651031 GACGTAATTTGAGCCGGAGC 59.349 55.000 5.05 0.00 40.32 4.70
472 473 2.295253 AGACGTAATTTGAGCCGGAG 57.705 50.000 5.05 0.00 0.00 4.63
473 474 2.343101 CAAGACGTAATTTGAGCCGGA 58.657 47.619 5.05 0.00 0.00 5.14
474 475 1.202031 GCAAGACGTAATTTGAGCCGG 60.202 52.381 0.00 0.00 0.00 6.13
475 476 1.202031 GGCAAGACGTAATTTGAGCCG 60.202 52.381 10.16 0.00 0.00 5.52
476 477 1.810151 TGGCAAGACGTAATTTGAGCC 59.190 47.619 10.16 8.01 41.15 4.70
477 478 2.724839 CGTGGCAAGACGTAATTTGAGC 60.725 50.000 10.16 0.00 34.56 4.26
478 479 2.724839 GCGTGGCAAGACGTAATTTGAG 60.725 50.000 4.11 1.61 41.54 3.02
479 480 1.195900 GCGTGGCAAGACGTAATTTGA 59.804 47.619 4.11 0.00 41.54 2.69
480 481 1.602191 GCGTGGCAAGACGTAATTTG 58.398 50.000 4.11 0.00 41.54 2.32
481 482 0.519961 GGCGTGGCAAGACGTAATTT 59.480 50.000 4.11 0.00 41.54 1.82
482 483 1.303091 GGGCGTGGCAAGACGTAATT 61.303 55.000 4.11 0.00 41.54 1.40
483 484 1.743995 GGGCGTGGCAAGACGTAAT 60.744 57.895 4.11 0.00 41.54 1.89
484 485 2.357760 GGGCGTGGCAAGACGTAA 60.358 61.111 4.11 0.00 41.54 3.18
485 486 3.291101 GAGGGCGTGGCAAGACGTA 62.291 63.158 4.11 0.00 41.54 3.57
486 487 4.681978 GAGGGCGTGGCAAGACGT 62.682 66.667 4.11 1.99 41.54 4.34
519 520 1.003580 GGTGGGATCTCAAGCTGTTGA 59.996 52.381 0.00 0.00 40.55 3.18
520 521 1.457346 GGTGGGATCTCAAGCTGTTG 58.543 55.000 0.00 0.00 34.67 3.33
521 522 0.329596 GGGTGGGATCTCAAGCTGTT 59.670 55.000 0.00 0.00 0.00 3.16
522 523 0.842030 TGGGTGGGATCTCAAGCTGT 60.842 55.000 0.00 0.00 0.00 4.40
523 524 0.107312 CTGGGTGGGATCTCAAGCTG 60.107 60.000 0.00 0.00 0.00 4.24
524 525 1.919600 GCTGGGTGGGATCTCAAGCT 61.920 60.000 10.02 0.00 0.00 3.74
525 526 1.452833 GCTGGGTGGGATCTCAAGC 60.453 63.158 0.00 0.00 0.00 4.01
526 527 1.153289 CGCTGGGTGGGATCTCAAG 60.153 63.158 0.00 0.00 0.00 3.02
527 528 2.989639 CGCTGGGTGGGATCTCAA 59.010 61.111 0.00 0.00 0.00 3.02
528 529 3.785859 GCGCTGGGTGGGATCTCA 61.786 66.667 0.00 0.00 0.00 3.27
529 530 4.554036 GGCGCTGGGTGGGATCTC 62.554 72.222 7.64 0.00 0.00 2.75
531 532 4.195334 ATGGCGCTGGGTGGGATC 62.195 66.667 7.64 0.00 0.00 3.36
532 533 4.511246 CATGGCGCTGGGTGGGAT 62.511 66.667 7.64 0.00 0.00 3.85
552 553 0.173708 GTGAGTGTGAGTCGGATCCC 59.826 60.000 6.06 0.00 0.00 3.85
553 554 0.173708 GGTGAGTGTGAGTCGGATCC 59.826 60.000 0.00 0.00 0.00 3.36
554 555 0.179161 CGGTGAGTGTGAGTCGGATC 60.179 60.000 0.00 0.00 0.00 3.36
555 556 1.595993 CCGGTGAGTGTGAGTCGGAT 61.596 60.000 0.00 0.00 39.83 4.18
556 557 2.265904 CCGGTGAGTGTGAGTCGGA 61.266 63.158 0.00 0.00 39.83 4.55
557 558 2.258591 CCGGTGAGTGTGAGTCGG 59.741 66.667 0.00 0.00 0.00 4.79
558 559 2.430921 GCCGGTGAGTGTGAGTCG 60.431 66.667 1.90 0.00 0.00 4.18
559 560 0.737715 GATGCCGGTGAGTGTGAGTC 60.738 60.000 1.90 0.00 0.00 3.36
560 561 1.293498 GATGCCGGTGAGTGTGAGT 59.707 57.895 1.90 0.00 0.00 3.41
561 562 0.320683 TTGATGCCGGTGAGTGTGAG 60.321 55.000 1.90 0.00 0.00 3.51
562 563 0.107643 TTTGATGCCGGTGAGTGTGA 59.892 50.000 1.90 0.00 0.00 3.58
563 564 0.518636 CTTTGATGCCGGTGAGTGTG 59.481 55.000 1.90 0.00 0.00 3.82
564 565 0.396435 TCTTTGATGCCGGTGAGTGT 59.604 50.000 1.90 0.00 0.00 3.55
565 566 1.466167 CTTCTTTGATGCCGGTGAGTG 59.534 52.381 1.90 0.00 0.00 3.51
566 567 1.347707 TCTTCTTTGATGCCGGTGAGT 59.652 47.619 1.90 0.00 0.00 3.41
567 568 1.734465 GTCTTCTTTGATGCCGGTGAG 59.266 52.381 1.90 0.00 0.00 3.51
568 569 1.610624 GGTCTTCTTTGATGCCGGTGA 60.611 52.381 1.90 0.00 0.00 4.02
569 570 0.804989 GGTCTTCTTTGATGCCGGTG 59.195 55.000 1.90 0.00 0.00 4.94
570 571 0.400213 TGGTCTTCTTTGATGCCGGT 59.600 50.000 1.90 0.00 0.00 5.28
571 572 1.089920 CTGGTCTTCTTTGATGCCGG 58.910 55.000 0.00 0.00 0.00 6.13
572 573 2.099141 TCTGGTCTTCTTTGATGCCG 57.901 50.000 0.00 0.00 0.00 5.69
573 574 6.705863 AATAATCTGGTCTTCTTTGATGCC 57.294 37.500 0.00 0.00 0.00 4.40
574 575 7.148018 TGGAAATAATCTGGTCTTCTTTGATGC 60.148 37.037 0.00 0.00 0.00 3.91
575 576 8.284945 TGGAAATAATCTGGTCTTCTTTGATG 57.715 34.615 0.00 0.00 0.00 3.07
576 577 8.331740 TCTGGAAATAATCTGGTCTTCTTTGAT 58.668 33.333 0.00 0.00 0.00 2.57
577 578 7.689299 TCTGGAAATAATCTGGTCTTCTTTGA 58.311 34.615 0.00 0.00 0.00 2.69
578 579 7.928307 TCTGGAAATAATCTGGTCTTCTTTG 57.072 36.000 0.00 0.00 0.00 2.77
674 1267 7.761038 ACTTAAAAAGGTGGATAAAGGAGTG 57.239 36.000 0.00 0.00 0.00 3.51
694 1293 1.134037 ACGGGCCTTGTGAACAACTTA 60.134 47.619 0.84 0.00 0.00 2.24
808 1408 5.087323 AGTTCAGTAGGGATGAAGTGAGAA 58.913 41.667 0.00 0.00 38.57 2.87
809 1409 4.678256 AGTTCAGTAGGGATGAAGTGAGA 58.322 43.478 0.00 0.00 38.57 3.27
852 1452 5.064962 GTCCACGATATATAGAAGGAGACCG 59.935 48.000 10.34 0.00 0.00 4.79
910 1510 1.002033 CTCTCGTTGCTTGCTTGCTTT 60.002 47.619 3.47 0.00 0.00 3.51
991 1596 2.034879 CGACCGCCATTGCTGTCTT 61.035 57.895 10.81 0.00 46.09 3.01
994 1599 3.049674 CACGACCGCCATTGCTGT 61.050 61.111 0.00 0.00 37.67 4.40
1590 2195 4.807631 TCGTCCCCGGCGATCTGA 62.808 66.667 9.30 0.00 33.09 3.27
1653 2261 0.898789 AACGACTCTCCGGTCACCAT 60.899 55.000 0.00 0.00 36.12 3.55
1660 2268 2.150397 AGAAACAAACGACTCTCCGG 57.850 50.000 0.00 0.00 0.00 5.14
1742 2352 3.610669 CCGATCGAGGGCAGGGAG 61.611 72.222 18.66 0.00 0.00 4.30
1831 2559 8.834465 TGCTGATCTTATTCTTAGCAGAAATTC 58.166 33.333 0.00 0.00 42.53 2.17
1872 2600 0.539986 TAGCCGTGAGATCCCAAACC 59.460 55.000 0.00 0.00 0.00 3.27
1875 2603 0.824109 CAGTAGCCGTGAGATCCCAA 59.176 55.000 0.00 0.00 0.00 4.12
1877 2605 0.386113 GACAGTAGCCGTGAGATCCC 59.614 60.000 0.00 0.00 0.00 3.85
1887 2615 4.513318 GCAGAATTTGATAGGACAGTAGCC 59.487 45.833 0.00 0.00 0.00 3.93
1932 2822 5.913137 TGTTGGAAAAGAAGAGAGCAAAA 57.087 34.783 0.00 0.00 0.00 2.44
1933 2823 5.913137 TTGTTGGAAAAGAAGAGAGCAAA 57.087 34.783 0.00 0.00 0.00 3.68
1934 2824 5.829924 AGATTGTTGGAAAAGAAGAGAGCAA 59.170 36.000 0.00 0.00 0.00 3.91
2031 4974 1.608590 AGTTTCCGCATTGTTGACTGG 59.391 47.619 0.00 0.00 0.00 4.00
2111 5067 5.528600 TGGATACTCCCAATTTTCTTGGA 57.471 39.130 5.57 0.00 38.71 3.53
2176 5132 1.407437 GGCCAATCAACCGATCAGACT 60.407 52.381 0.00 0.00 0.00 3.24
2181 5137 0.472471 TAGGGGCCAATCAACCGATC 59.528 55.000 4.39 0.00 0.00 3.69
2183 5139 1.912220 CTAGGGGCCAATCAACCGA 59.088 57.895 4.39 0.00 0.00 4.69
2184 5140 1.823899 GCTAGGGGCCAATCAACCG 60.824 63.158 4.39 0.00 34.27 4.44
2359 5506 8.439971 TGTCCTTGATTTATTGCTGGACTATAT 58.560 33.333 0.00 0.00 41.93 0.86
2360 5507 7.801104 TGTCCTTGATTTATTGCTGGACTATA 58.199 34.615 0.00 0.00 41.93 1.31
2364 5511 4.439289 GCTGTCCTTGATTTATTGCTGGAC 60.439 45.833 0.00 0.00 41.81 4.02
2454 5728 9.528018 GAGTAGACTAGAACGTACTACTGTATT 57.472 37.037 0.00 0.00 42.11 1.89
2457 5731 6.337356 GGAGTAGACTAGAACGTACTACTGT 58.663 44.000 0.00 0.00 42.11 3.55
2458 5732 5.458452 CGGAGTAGACTAGAACGTACTACTG 59.542 48.000 0.00 0.00 42.11 2.74
2459 5733 5.126384 ACGGAGTAGACTAGAACGTACTACT 59.874 44.000 0.00 0.00 41.94 2.57
2460 5734 5.344884 ACGGAGTAGACTAGAACGTACTAC 58.655 45.833 0.00 0.00 41.94 2.73
2461 5735 5.584253 ACGGAGTAGACTAGAACGTACTA 57.416 43.478 0.00 0.00 41.94 1.82
2481 5917 3.552273 CCTCCATTTCCATACCGACTACG 60.552 52.174 0.00 0.00 39.43 3.51
2485 5921 3.553828 TTCCTCCATTTCCATACCGAC 57.446 47.619 0.00 0.00 0.00 4.79
2486 5922 3.747388 GCATTCCTCCATTTCCATACCGA 60.747 47.826 0.00 0.00 0.00 4.69
2487 5923 2.554032 GCATTCCTCCATTTCCATACCG 59.446 50.000 0.00 0.00 0.00 4.02
2488 5924 3.319122 GTGCATTCCTCCATTTCCATACC 59.681 47.826 0.00 0.00 0.00 2.73
2489 5925 4.037208 CAGTGCATTCCTCCATTTCCATAC 59.963 45.833 0.00 0.00 0.00 2.39
2490 5926 4.209538 CAGTGCATTCCTCCATTTCCATA 58.790 43.478 0.00 0.00 0.00 2.74
2491 5927 3.028850 CAGTGCATTCCTCCATTTCCAT 58.971 45.455 0.00 0.00 0.00 3.41
2492 5928 2.449464 CAGTGCATTCCTCCATTTCCA 58.551 47.619 0.00 0.00 0.00 3.53
2493 5929 1.135721 GCAGTGCATTCCTCCATTTCC 59.864 52.381 11.09 0.00 0.00 3.13
2494 5930 2.097825 AGCAGTGCATTCCTCCATTTC 58.902 47.619 19.20 0.00 0.00 2.17
2495 5931 2.226962 AGCAGTGCATTCCTCCATTT 57.773 45.000 19.20 0.00 0.00 2.32
2496 5932 1.822990 CAAGCAGTGCATTCCTCCATT 59.177 47.619 19.20 0.00 0.00 3.16
2497 5933 1.272313 ACAAGCAGTGCATTCCTCCAT 60.272 47.619 19.20 0.00 0.00 3.41
2498 5934 0.111061 ACAAGCAGTGCATTCCTCCA 59.889 50.000 19.20 0.00 0.00 3.86
2499 5935 1.251251 AACAAGCAGTGCATTCCTCC 58.749 50.000 19.20 0.00 0.00 4.30
2500 5936 4.418392 CATAAACAAGCAGTGCATTCCTC 58.582 43.478 19.20 0.00 0.00 3.71
2501 5937 3.367703 GCATAAACAAGCAGTGCATTCCT 60.368 43.478 19.20 0.91 35.93 3.36
2528 5964 2.923655 ACATGCACGCGTATATATCTGC 59.076 45.455 13.44 9.56 0.00 4.26
2529 5965 5.346011 AGAAACATGCACGCGTATATATCTG 59.654 40.000 13.44 5.53 0.00 2.90
2530 5966 5.470368 AGAAACATGCACGCGTATATATCT 58.530 37.500 13.44 7.37 0.00 1.98
2531 5967 5.763444 AGAAACATGCACGCGTATATATC 57.237 39.130 13.44 4.96 0.00 1.63
2532 5968 6.539649 AAAGAAACATGCACGCGTATATAT 57.460 33.333 13.44 0.63 0.00 0.86
2533 5969 5.977171 AAAGAAACATGCACGCGTATATA 57.023 34.783 13.44 0.00 0.00 0.86
2534 5970 4.875544 AAAGAAACATGCACGCGTATAT 57.124 36.364 13.44 6.50 0.00 0.86
2535 5971 4.390603 AGAAAAGAAACATGCACGCGTATA 59.609 37.500 13.44 3.79 0.00 1.47
2536 5972 3.188460 AGAAAAGAAACATGCACGCGTAT 59.812 39.130 13.44 0.00 0.00 3.06
2537 5973 2.546368 AGAAAAGAAACATGCACGCGTA 59.454 40.909 13.44 0.00 0.00 4.42
2538 5974 1.333619 AGAAAAGAAACATGCACGCGT 59.666 42.857 5.58 5.58 0.00 6.01
2539 5975 1.710249 CAGAAAAGAAACATGCACGCG 59.290 47.619 3.53 3.53 0.00 6.01
2540 5976 2.468777 CACAGAAAAGAAACATGCACGC 59.531 45.455 0.00 0.00 0.00 5.34
2541 5977 2.468777 GCACAGAAAAGAAACATGCACG 59.531 45.455 0.00 0.00 0.00 5.34
2542 5978 2.796593 GGCACAGAAAAGAAACATGCAC 59.203 45.455 0.00 0.00 33.24 4.57
2543 5979 2.694628 AGGCACAGAAAAGAAACATGCA 59.305 40.909 0.00 0.00 33.24 3.96
2544 5980 3.375782 AGGCACAGAAAAGAAACATGC 57.624 42.857 0.00 0.00 0.00 4.06
2545 5981 5.811613 TCAAAAGGCACAGAAAAGAAACATG 59.188 36.000 0.00 0.00 0.00 3.21
2546 5982 5.812127 GTCAAAAGGCACAGAAAAGAAACAT 59.188 36.000 0.00 0.00 0.00 2.71
2547 5983 5.167845 GTCAAAAGGCACAGAAAAGAAACA 58.832 37.500 0.00 0.00 0.00 2.83
2624 6088 2.892425 GCCGGACCTGATCAAGCG 60.892 66.667 5.05 0.00 0.00 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.