Multiple sequence alignment - TraesCS3D01G305900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G305900 chr3D 100.000 4147 0 0 1 4147 419876773 419872627 0.000000e+00 7659.0
1 TraesCS3D01G305900 chr3D 87.007 1293 138 12 1407 2689 471421201 471419929 0.000000e+00 1430.0
2 TraesCS3D01G305900 chr3D 90.000 80 3 1 3678 3757 202630534 202630608 9.490000e-17 99.0
3 TraesCS3D01G305900 chr3D 96.875 32 1 0 4113 4144 419841732 419841701 2.000000e-03 54.7
4 TraesCS3D01G305900 chr3A 95.841 2573 77 13 1164 3728 531453889 531456439 0.000000e+00 4132.0
5 TraesCS3D01G305900 chr3A 86.480 1679 193 16 1499 3167 614239379 614237725 0.000000e+00 1812.0
6 TraesCS3D01G305900 chr3A 86.779 1422 176 5 1710 3123 614126310 614124893 0.000000e+00 1574.0
7 TraesCS3D01G305900 chr3A 89.206 630 36 13 396 1021 531453000 531453601 0.000000e+00 758.0
8 TraesCS3D01G305900 chr3A 89.024 410 34 6 1 402 531452394 531452800 8.010000e-137 497.0
9 TraesCS3D01G305900 chr3A 83.096 491 48 12 1257 1729 614126960 614126487 8.290000e-112 414.0
10 TraesCS3D01G305900 chr3A 92.810 153 7 1 1019 1167 531453632 531453784 6.980000e-53 219.0
11 TraesCS3D01G305900 chr3A 92.857 42 3 0 3879 3920 25257932 25257973 1.240000e-05 62.1
12 TraesCS3D01G305900 chr3B 85.263 2056 227 30 1171 3197 626303326 626301318 0.000000e+00 2049.0
13 TraesCS3D01G305900 chr3B 89.222 167 18 0 3755 3921 23679437 23679603 4.200000e-50 209.0
14 TraesCS3D01G305900 chr3B 87.629 97 11 1 256 352 647826318 647826413 1.220000e-20 111.0
15 TraesCS3D01G305900 chr3B 93.151 73 5 0 3955 4027 30408437 30408365 1.580000e-19 108.0
16 TraesCS3D01G305900 chr7D 92.771 166 12 0 3755 3920 563702213 563702378 1.490000e-59 241.0
17 TraesCS3D01G305900 chr4B 92.638 163 12 0 3760 3922 98454568 98454406 6.930000e-58 235.0
18 TraesCS3D01G305900 chr1D 87.379 103 13 0 256 358 66380923 66381025 7.280000e-23 119.0
19 TraesCS3D01G305900 chr1A 88.119 101 10 2 257 357 556272492 556272590 7.280000e-23 119.0
20 TraesCS3D01G305900 chr1A 86.275 102 14 0 256 357 491376440 491376541 1.220000e-20 111.0
21 TraesCS3D01G305900 chr7A 88.172 93 10 1 259 351 10423040 10422949 4.380000e-20 110.0
22 TraesCS3D01G305900 chr2D 87.500 96 11 1 256 351 645666274 645666368 4.380000e-20 110.0
23 TraesCS3D01G305900 chr2A 86.735 98 13 0 256 353 26933089 26933186 4.380000e-20 110.0
24 TraesCS3D01G305900 chr6A 87.368 95 11 1 259 353 590370981 590370888 1.580000e-19 108.0
25 TraesCS3D01G305900 chr6A 89.474 57 6 0 3855 3911 10517137 10517193 5.750000e-09 73.1
26 TraesCS3D01G305900 chr6A 89.474 57 6 0 3855 3911 10559698 10559754 5.750000e-09 73.1
27 TraesCS3D01G305900 chr6D 95.385 65 3 0 3957 4021 370012673 370012737 2.040000e-18 104.0
28 TraesCS3D01G305900 chr6D 90.000 80 3 2 3678 3757 430474515 430474589 9.490000e-17 99.0
29 TraesCS3D01G305900 chr4D 92.958 71 5 0 3957 4027 135043019 135042949 2.040000e-18 104.0
30 TraesCS3D01G305900 chrUn 90.000 80 3 1 3678 3757 246703308 246703382 9.490000e-17 99.0
31 TraesCS3D01G305900 chrUn 96.875 32 1 0 4113 4144 461764950 461764919 2.000000e-03 54.7
32 TraesCS3D01G305900 chr7B 90.000 80 3 1 3678 3757 698132924 698132998 9.490000e-17 99.0
33 TraesCS3D01G305900 chr7B 90.000 80 3 1 3678 3757 742931172 742931098 9.490000e-17 99.0
34 TraesCS3D01G305900 chr6B 90.000 80 3 1 3678 3757 128896296 128896370 9.490000e-17 99.0
35 TraesCS3D01G305900 chr6B 90.000 80 3 1 3678 3757 388137189 388137115 9.490000e-17 99.0
36 TraesCS3D01G305900 chr1B 90.000 80 3 1 3678 3757 583544001 583543927 9.490000e-17 99.0
37 TraesCS3D01G305900 chr5D 90.141 71 6 1 3957 4027 555231068 555230999 1.590000e-14 91.6
38 TraesCS3D01G305900 chr5B 82.278 79 13 1 2553 2631 448274619 448274542 2.680000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G305900 chr3D 419872627 419876773 4146 True 7659.0 7659 100.00000 1 4147 1 chr3D.!!$R2 4146
1 TraesCS3D01G305900 chr3D 471419929 471421201 1272 True 1430.0 1430 87.00700 1407 2689 1 chr3D.!!$R3 1282
2 TraesCS3D01G305900 chr3A 614237725 614239379 1654 True 1812.0 1812 86.48000 1499 3167 1 chr3A.!!$R1 1668
3 TraesCS3D01G305900 chr3A 531452394 531456439 4045 False 1401.5 4132 91.72025 1 3728 4 chr3A.!!$F2 3727
4 TraesCS3D01G305900 chr3A 614124893 614126960 2067 True 994.0 1574 84.93750 1257 3123 2 chr3A.!!$R2 1866
5 TraesCS3D01G305900 chr3B 626301318 626303326 2008 True 2049.0 2049 85.26300 1171 3197 1 chr3B.!!$R2 2026

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
537 752 0.806102 CACCGGATCGACCACATCAC 60.806 60.0 9.46 0.0 38.90 3.06 F
1026 1276 0.033228 CGGAGCTCAGCCCAGATAAG 59.967 60.0 17.19 0.0 0.00 1.73 F
1035 1285 0.249657 GCCCAGATAAGCAGGACTCG 60.250 60.0 0.00 0.0 0.00 4.18 F
1037 1287 0.749649 CCAGATAAGCAGGACTCGCT 59.250 55.0 0.00 0.0 42.98 4.93 F
1101 1351 0.846693 GGTCATGGCCCAATCTACCT 59.153 55.0 4.49 0.0 0.00 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2533 3116 0.698238 CCCTCACCATCCTCACCAAA 59.302 55.000 0.0 0.0 0.00 3.28 R
2843 3429 2.005451 AGCTCAACTATGCTCTTTGCG 58.995 47.619 0.0 0.0 46.63 4.85 R
3002 3594 5.500234 AGTGCTTTATGTGCTTCCAAGATA 58.500 37.500 0.0 0.0 0.00 1.98 R
3048 3640 3.071747 ACTGAAGAGGGAACTTTCTCCAC 59.928 47.826 0.0 0.0 44.43 4.02 R
3188 3780 3.429085 CAACACAGCAGAGAACAACAAC 58.571 45.455 0.0 0.0 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.392882 CCATTTGTGCCTCAAAAGGTTC 58.607 45.455 13.77 0.00 46.97 3.62
56 57 2.290641 GCTTCAGGTCGTGTGTCAAATT 59.709 45.455 0.00 0.00 0.00 1.82
57 58 3.849645 GCTTCAGGTCGTGTGTCAAATTG 60.850 47.826 0.00 0.00 0.00 2.32
60 61 4.055360 TCAGGTCGTGTGTCAAATTGTAG 58.945 43.478 0.00 0.00 0.00 2.74
78 87 5.654603 TGTAGGTGATTACGTGACAGAAT 57.345 39.130 0.00 0.00 0.00 2.40
81 90 8.454570 TGTAGGTGATTACGTGACAGAATATA 57.545 34.615 0.00 0.00 0.00 0.86
110 119 4.074466 GGCACGGTAACTGTTGAATAAC 57.926 45.455 2.69 0.00 37.32 1.89
111 120 3.120095 GGCACGGTAACTGTTGAATAACC 60.120 47.826 2.69 1.32 35.92 2.85
117 126 5.872617 CGGTAACTGTTGAATAACCTCATGA 59.127 40.000 2.69 0.00 35.92 3.07
126 135 7.760794 TGTTGAATAACCTCATGATTTTGCATC 59.239 33.333 0.00 0.00 35.92 3.91
127 136 7.649533 TGAATAACCTCATGATTTTGCATCT 57.350 32.000 0.00 0.00 0.00 2.90
137 146 8.387190 TCATGATTTTGCATCTCTCGAATAAT 57.613 30.769 0.00 0.00 0.00 1.28
183 192 3.376859 GTCCAATAAACATCATGACGGCA 59.623 43.478 0.00 0.00 0.00 5.69
189 198 1.896220 ACATCATGACGGCACAGTTT 58.104 45.000 0.00 0.00 0.00 2.66
192 201 2.093306 TCATGACGGCACAGTTTAGG 57.907 50.000 0.00 0.00 0.00 2.69
247 256 4.454403 TCGAATTGACTCGACGAGATAG 57.546 45.455 30.56 13.58 42.69 2.08
273 282 2.359900 GCTGTTCCATGGACCTAGTTG 58.640 52.381 15.91 1.98 0.00 3.16
280 289 6.432783 TGTTCCATGGACCTAGTTGTAATTTG 59.567 38.462 15.91 0.00 0.00 2.32
307 316 7.891498 TTACCTCTATTGTGCTATGTACTGA 57.109 36.000 0.00 0.00 0.00 3.41
308 317 6.791867 ACCTCTATTGTGCTATGTACTGAA 57.208 37.500 0.00 0.00 0.00 3.02
422 637 9.877137 AGATTTTTGTTTTCTTTGACACAAAAC 57.123 25.926 8.23 8.62 44.67 2.43
423 638 9.657121 GATTTTTGTTTTCTTTGACACAAAACA 57.343 25.926 12.23 12.23 44.67 2.83
424 639 8.828029 TTTTTGTTTTCTTTGACACAAAACAC 57.172 26.923 14.52 0.00 45.25 3.32
425 640 7.778470 TTTGTTTTCTTTGACACAAAACACT 57.222 28.000 14.52 0.00 45.25 3.55
426 641 7.778470 TTGTTTTCTTTGACACAAAACACTT 57.222 28.000 14.52 0.00 45.25 3.16
505 720 2.948924 AAGCCCAGGCCCAGGATT 60.949 61.111 12.90 9.59 43.17 3.01
528 743 3.458163 GGTCCAGCACCGGATCGA 61.458 66.667 9.46 0.00 37.41 3.59
529 744 2.202756 GTCCAGCACCGGATCGAC 60.203 66.667 9.46 2.07 37.41 4.20
530 745 3.458163 TCCAGCACCGGATCGACC 61.458 66.667 9.46 0.00 0.00 4.79
531 746 3.770040 CCAGCACCGGATCGACCA 61.770 66.667 9.46 0.00 38.90 4.02
532 747 2.509336 CAGCACCGGATCGACCAC 60.509 66.667 9.46 0.00 38.90 4.16
534 749 2.186903 GCACCGGATCGACCACAT 59.813 61.111 9.46 0.00 38.90 3.21
535 750 1.883084 GCACCGGATCGACCACATC 60.883 63.158 9.46 0.00 38.90 3.06
536 751 1.515487 CACCGGATCGACCACATCA 59.485 57.895 9.46 0.00 38.90 3.07
537 752 0.806102 CACCGGATCGACCACATCAC 60.806 60.000 9.46 0.00 38.90 3.06
538 753 1.588932 CCGGATCGACCACATCACG 60.589 63.158 0.00 0.00 38.90 4.35
539 754 1.138883 CGGATCGACCACATCACGT 59.861 57.895 0.00 0.00 38.90 4.49
620 837 2.187163 GAGTCTTAGGGCGCCACC 59.813 66.667 30.85 12.35 37.93 4.61
621 838 3.718210 GAGTCTTAGGGCGCCACCG 62.718 68.421 30.85 13.35 40.62 4.94
622 839 4.832608 GTCTTAGGGCGCCACCGG 62.833 72.222 30.85 15.29 40.62 5.28
672 889 4.172512 CCTGCTGCCGCATCTCCT 62.173 66.667 2.34 0.00 46.74 3.69
773 990 3.329542 GAGCGCCTCCATCACCCAA 62.330 63.158 2.29 0.00 0.00 4.12
810 1027 3.622060 AAACCGTGATCCCTGGCCG 62.622 63.158 0.00 0.00 0.00 6.13
832 1049 1.077445 GGGGCAAAAGCCTCCTTCT 59.923 57.895 6.45 0.00 0.00 2.85
861 1078 4.814041 GAGAGGGGCCTGGGCTCT 62.814 72.222 24.38 24.38 42.23 4.09
930 1147 4.394712 CCGCCCTTGTCGCCTTCT 62.395 66.667 0.00 0.00 0.00 2.85
938 1155 1.019278 TTGTCGCCTTCTGAATCGCC 61.019 55.000 7.15 0.00 0.00 5.54
954 1171 3.214123 CCGGAGGCGGATCGTACA 61.214 66.667 0.00 0.00 46.14 2.90
960 1177 1.674962 GAGGCGGATCGTACAGTTACT 59.325 52.381 0.00 0.00 0.00 2.24
961 1178 1.404391 AGGCGGATCGTACAGTTACTG 59.596 52.381 11.21 11.21 37.52 2.74
965 1182 3.302699 GCGGATCGTACAGTTACTGTTTC 59.697 47.826 23.52 15.08 42.59 2.78
974 1191 2.416547 CAGTTACTGTTTCGCCCATCAG 59.583 50.000 3.88 0.00 0.00 2.90
1026 1276 0.033228 CGGAGCTCAGCCCAGATAAG 59.967 60.000 17.19 0.00 0.00 1.73
1031 1281 1.126488 CTCAGCCCAGATAAGCAGGA 58.874 55.000 0.00 0.00 0.00 3.86
1035 1285 0.249657 GCCCAGATAAGCAGGACTCG 60.250 60.000 0.00 0.00 0.00 4.18
1037 1287 0.749649 CCAGATAAGCAGGACTCGCT 59.250 55.000 0.00 0.00 42.98 4.93
1072 1322 3.779738 TGATCATTCACAGGGTGGTGATA 59.220 43.478 13.90 5.34 46.37 2.15
1088 1338 2.789339 GTGATACGTCGACATGGTCATG 59.211 50.000 17.16 9.19 44.15 3.07
1101 1351 0.846693 GGTCATGGCCCAATCTACCT 59.153 55.000 4.49 0.00 0.00 3.08
1213 1575 8.519799 TCAAAGAATAGGTTATGGAATTGGTC 57.480 34.615 0.00 0.00 0.00 4.02
1215 1577 6.494666 AGAATAGGTTATGGAATTGGTCGA 57.505 37.500 0.00 0.00 0.00 4.20
1250 1613 5.158889 AGGTTATGGGGAAAAATCCAACAA 58.841 37.500 0.00 0.00 36.54 2.83
1384 1761 7.929941 TCTACCACAATTACATTACAATGCA 57.070 32.000 1.84 0.00 40.04 3.96
1385 1762 7.757526 TCTACCACAATTACATTACAATGCAC 58.242 34.615 1.84 0.00 40.04 4.57
1386 1763 6.588719 ACCACAATTACATTACAATGCACT 57.411 33.333 1.84 0.00 40.04 4.40
1387 1764 6.991938 ACCACAATTACATTACAATGCACTT 58.008 32.000 1.84 0.00 40.04 3.16
1388 1765 8.116651 ACCACAATTACATTACAATGCACTTA 57.883 30.769 1.84 0.00 40.04 2.24
1588 1974 1.377202 ATTGCGTGATTCTGCCCGT 60.377 52.632 0.16 0.00 0.00 5.28
1616 2002 5.292765 CCTGTGTATCTCGCACATTTCTAT 58.707 41.667 0.00 0.00 44.54 1.98
1621 2007 5.753438 TGTATCTCGCACATTTCTATGTTCC 59.247 40.000 0.00 0.00 42.29 3.62
1880 2462 2.032924 ACACTTTTGCTGCCTACGAAAC 59.967 45.455 0.00 0.00 0.00 2.78
2391 2974 7.033791 ACTGTATACTCGTTTTGTGAGGTATG 58.966 38.462 4.17 0.00 37.79 2.39
2506 3089 3.763360 CCCAATGGTAGCTGACAAATTCA 59.237 43.478 0.00 0.00 0.00 2.57
2533 3116 8.486210 TCCACATAAAGCACTTGAATATCTACT 58.514 33.333 0.00 0.00 0.00 2.57
2546 3129 6.830912 TGAATATCTACTTTGGTGAGGATGG 58.169 40.000 0.00 0.00 0.00 3.51
2550 3133 2.867109 ACTTTGGTGAGGATGGTGAG 57.133 50.000 0.00 0.00 0.00 3.51
2843 3429 2.533266 CAAATCGATGGCTTTTGCTCC 58.467 47.619 0.00 0.00 46.54 4.70
3002 3594 2.437716 CCCACAAGCCGGCGTATT 60.438 61.111 23.20 7.29 0.00 1.89
3048 3640 2.120232 GTGCCGTCAAGAGATACATCG 58.880 52.381 0.00 0.00 0.00 3.84
3078 3670 5.216614 AGTTCCCTCTTCAGTCAAGTTAC 57.783 43.478 0.00 0.00 33.27 2.50
3081 3673 6.497259 AGTTCCCTCTTCAGTCAAGTTACATA 59.503 38.462 0.00 0.00 33.27 2.29
3188 3780 3.057019 TGTCCTTCGTCTTCATTGTTCG 58.943 45.455 0.00 0.00 0.00 3.95
3268 3861 5.045215 CACACATGTGCTTTCATTTCTTGT 58.955 37.500 25.68 0.00 39.39 3.16
3291 3884 6.077838 GTCAAGTTACCAGTTTTTCTATGCG 58.922 40.000 0.00 0.00 0.00 4.73
3296 3889 2.031157 ACCAGTTTTTCTATGCGTGTGC 60.031 45.455 0.00 0.00 43.20 4.57
3430 4023 9.329913 CTGTTTCTTCAATTAAATCGTTGGTAG 57.670 33.333 0.00 0.00 0.00 3.18
3470 4063 2.844122 TGGTGACGATGACTATCACG 57.156 50.000 0.00 0.00 43.03 4.35
3474 4067 3.243434 GGTGACGATGACTATCACGGATT 60.243 47.826 0.00 0.00 43.03 3.01
3475 4068 4.360563 GTGACGATGACTATCACGGATTT 58.639 43.478 0.00 0.00 33.94 2.17
3476 4069 4.207224 GTGACGATGACTATCACGGATTTG 59.793 45.833 0.00 0.00 33.94 2.32
3477 4070 3.717707 ACGATGACTATCACGGATTTGG 58.282 45.455 0.00 0.00 32.67 3.28
3505 4098 0.318762 GCTTGGAGGAGGCTATACCG 59.681 60.000 0.00 0.00 46.52 4.02
3555 4148 1.617850 TGGAACGGCTCAATTGCAAAT 59.382 42.857 1.71 0.00 34.04 2.32
3557 4150 3.066380 GGAACGGCTCAATTGCAAATTT 58.934 40.909 1.71 0.00 34.04 1.82
3573 4166 4.618927 GCAAATTTTCAGCTCACTGGCATA 60.619 41.667 0.00 0.00 44.59 3.14
3574 4167 5.657474 CAAATTTTCAGCTCACTGGCATAT 58.343 37.500 0.00 0.00 44.59 1.78
3575 4168 6.681120 GCAAATTTTCAGCTCACTGGCATATA 60.681 38.462 0.00 0.00 44.59 0.86
3576 4169 7.431249 CAAATTTTCAGCTCACTGGCATATAT 58.569 34.615 0.00 0.00 44.59 0.86
3650 4243 6.403855 GGTCTAGGCGAGTATTGTCAGATATC 60.404 46.154 0.00 0.00 0.00 1.63
3697 4290 5.270893 AGTATGGTGGTTTTTGTTGTTCC 57.729 39.130 0.00 0.00 0.00 3.62
3698 4291 3.552132 ATGGTGGTTTTTGTTGTTCCC 57.448 42.857 0.00 0.00 0.00 3.97
3699 4292 1.204941 TGGTGGTTTTTGTTGTTCCCG 59.795 47.619 0.00 0.00 0.00 5.14
3700 4293 1.282817 GTGGTTTTTGTTGTTCCCGC 58.717 50.000 0.00 0.00 0.00 6.13
3701 4294 0.179134 TGGTTTTTGTTGTTCCCGCG 60.179 50.000 0.00 0.00 0.00 6.46
3702 4295 0.100861 GGTTTTTGTTGTTCCCGCGA 59.899 50.000 8.23 0.00 0.00 5.87
3728 4321 2.012673 AGCGAAGATCAATCACTTGGC 58.987 47.619 0.00 0.00 44.11 4.52
3729 4322 1.267732 GCGAAGATCAATCACTTGGCG 60.268 52.381 0.00 0.00 37.86 5.69
3730 4323 2.270923 CGAAGATCAATCACTTGGCGA 58.729 47.619 0.00 0.00 32.95 5.54
3731 4324 2.672874 CGAAGATCAATCACTTGGCGAA 59.327 45.455 0.00 0.00 32.95 4.70
3732 4325 3.310774 CGAAGATCAATCACTTGGCGAAT 59.689 43.478 0.00 0.00 32.95 3.34
3733 4326 4.595116 GAAGATCAATCACTTGGCGAATG 58.405 43.478 0.00 0.00 32.95 2.67
3734 4327 3.877559 AGATCAATCACTTGGCGAATGA 58.122 40.909 0.00 0.00 32.95 2.57
3735 4328 4.264253 AGATCAATCACTTGGCGAATGAA 58.736 39.130 0.00 0.00 32.95 2.57
3736 4329 4.334759 AGATCAATCACTTGGCGAATGAAG 59.665 41.667 0.00 0.00 32.95 3.02
3737 4330 3.411446 TCAATCACTTGGCGAATGAAGT 58.589 40.909 0.00 0.00 32.95 3.01
3739 4332 1.522668 TCACTTGGCGAATGAAGTGG 58.477 50.000 12.87 0.00 46.08 4.00
3740 4333 1.071542 TCACTTGGCGAATGAAGTGGA 59.928 47.619 12.87 0.74 46.08 4.02
3741 4334 2.086869 CACTTGGCGAATGAAGTGGAT 58.913 47.619 6.73 0.00 43.55 3.41
3742 4335 2.489329 CACTTGGCGAATGAAGTGGATT 59.511 45.455 6.73 0.00 43.55 3.01
3743 4336 3.689161 CACTTGGCGAATGAAGTGGATTA 59.311 43.478 6.73 0.00 43.55 1.75
3744 4337 4.155826 CACTTGGCGAATGAAGTGGATTAA 59.844 41.667 6.73 0.00 43.55 1.40
3745 4338 4.156008 ACTTGGCGAATGAAGTGGATTAAC 59.844 41.667 0.00 0.00 31.09 2.01
3746 4339 3.013921 TGGCGAATGAAGTGGATTAACC 58.986 45.455 0.00 0.00 39.54 2.85
3747 4340 3.279434 GGCGAATGAAGTGGATTAACCT 58.721 45.455 0.00 0.00 39.86 3.50
3748 4341 3.312697 GGCGAATGAAGTGGATTAACCTC 59.687 47.826 0.00 0.00 39.86 3.85
3749 4342 4.192317 GCGAATGAAGTGGATTAACCTCT 58.808 43.478 0.00 0.00 43.32 3.69
3756 4349 5.468540 AAGTGGATTAACCTCTTTTTGGC 57.531 39.130 0.00 0.00 46.31 4.52
3757 4350 4.479158 AGTGGATTAACCTCTTTTTGGCA 58.521 39.130 0.00 0.00 39.14 4.92
3758 4351 4.898861 AGTGGATTAACCTCTTTTTGGCAA 59.101 37.500 0.00 0.00 39.14 4.52
3759 4352 5.365314 AGTGGATTAACCTCTTTTTGGCAAA 59.635 36.000 8.93 8.93 39.14 3.68
3760 4353 6.043127 AGTGGATTAACCTCTTTTTGGCAAAT 59.957 34.615 14.29 0.00 39.14 2.32
3761 4354 6.147656 GTGGATTAACCTCTTTTTGGCAAATG 59.852 38.462 14.29 10.00 39.86 2.32
3762 4355 6.042552 TGGATTAACCTCTTTTTGGCAAATGA 59.957 34.615 14.29 13.57 39.86 2.57
3763 4356 6.368791 GGATTAACCTCTTTTTGGCAAATGAC 59.631 38.462 14.29 2.38 35.41 3.06
3764 4357 3.369546 ACCTCTTTTTGGCAAATGACG 57.630 42.857 14.29 11.03 0.00 4.35
3765 4358 2.955660 ACCTCTTTTTGGCAAATGACGA 59.044 40.909 14.29 7.09 0.00 4.20
3766 4359 3.573967 ACCTCTTTTTGGCAAATGACGAT 59.426 39.130 14.29 0.00 0.00 3.73
3767 4360 4.764823 ACCTCTTTTTGGCAAATGACGATA 59.235 37.500 14.29 0.00 0.00 2.92
3768 4361 5.095490 CCTCTTTTTGGCAAATGACGATAC 58.905 41.667 14.29 0.00 0.00 2.24
3769 4362 5.054390 TCTTTTTGGCAAATGACGATACC 57.946 39.130 14.29 0.00 0.00 2.73
3770 4363 4.520874 TCTTTTTGGCAAATGACGATACCA 59.479 37.500 14.29 0.00 0.00 3.25
3771 4364 4.855715 TTTTGGCAAATGACGATACCAA 57.144 36.364 14.29 0.00 35.46 3.67
3772 4365 3.840890 TTGGCAAATGACGATACCAAC 57.159 42.857 0.00 0.00 32.44 3.77
3773 4366 2.088423 TGGCAAATGACGATACCAACC 58.912 47.619 0.00 0.00 0.00 3.77
3774 4367 2.088423 GGCAAATGACGATACCAACCA 58.912 47.619 0.00 0.00 0.00 3.67
3775 4368 2.097466 GGCAAATGACGATACCAACCAG 59.903 50.000 0.00 0.00 0.00 4.00
3776 4369 2.747446 GCAAATGACGATACCAACCAGT 59.253 45.455 0.00 0.00 0.00 4.00
3777 4370 3.936453 GCAAATGACGATACCAACCAGTA 59.064 43.478 0.00 0.00 0.00 2.74
3778 4371 4.393680 GCAAATGACGATACCAACCAGTAA 59.606 41.667 0.00 0.00 0.00 2.24
3779 4372 5.065988 GCAAATGACGATACCAACCAGTAAT 59.934 40.000 0.00 0.00 0.00 1.89
3780 4373 6.259167 GCAAATGACGATACCAACCAGTAATA 59.741 38.462 0.00 0.00 0.00 0.98
3781 4374 7.201661 GCAAATGACGATACCAACCAGTAATAA 60.202 37.037 0.00 0.00 0.00 1.40
3782 4375 8.670135 CAAATGACGATACCAACCAGTAATAAA 58.330 33.333 0.00 0.00 0.00 1.40
3783 4376 8.974060 AATGACGATACCAACCAGTAATAAAT 57.026 30.769 0.00 0.00 0.00 1.40
3784 4377 7.780008 TGACGATACCAACCAGTAATAAATG 57.220 36.000 0.00 0.00 0.00 2.32
3785 4378 6.259167 TGACGATACCAACCAGTAATAAATGC 59.741 38.462 0.00 0.00 0.00 3.56
3786 4379 5.235616 ACGATACCAACCAGTAATAAATGCG 59.764 40.000 0.00 0.00 0.00 4.73
3787 4380 3.775661 ACCAACCAGTAATAAATGCGC 57.224 42.857 0.00 0.00 0.00 6.09
3788 4381 3.352648 ACCAACCAGTAATAAATGCGCT 58.647 40.909 9.73 0.00 0.00 5.92
3789 4382 3.128589 ACCAACCAGTAATAAATGCGCTG 59.871 43.478 9.73 0.00 0.00 5.18
3791 4384 2.405892 CCAGTAATAAATGCGCTGGC 57.594 50.000 9.73 0.00 39.97 4.85
3792 4385 1.001378 CCAGTAATAAATGCGCTGGCC 60.001 52.381 9.73 0.00 39.97 5.36
3793 4386 1.001378 CAGTAATAAATGCGCTGGCCC 60.001 52.381 9.73 0.00 38.85 5.80
3794 4387 1.028905 GTAATAAATGCGCTGGCCCA 58.971 50.000 9.73 0.00 38.85 5.36
3795 4388 1.407258 GTAATAAATGCGCTGGCCCAA 59.593 47.619 9.73 0.00 38.85 4.12
3796 4389 0.901124 AATAAATGCGCTGGCCCAAA 59.099 45.000 9.73 0.00 38.85 3.28
3797 4390 1.122227 ATAAATGCGCTGGCCCAAAT 58.878 45.000 9.73 0.00 38.85 2.32
3798 4391 0.901124 TAAATGCGCTGGCCCAAATT 59.099 45.000 9.73 0.00 38.85 1.82
3799 4392 0.391528 AAATGCGCTGGCCCAAATTC 60.392 50.000 9.73 0.00 38.85 2.17
3800 4393 1.543065 AATGCGCTGGCCCAAATTCA 61.543 50.000 9.73 0.00 38.85 2.57
3801 4394 1.332144 ATGCGCTGGCCCAAATTCAT 61.332 50.000 9.73 0.00 38.85 2.57
3802 4395 1.218854 GCGCTGGCCCAAATTCATT 59.781 52.632 0.00 0.00 0.00 2.57
3803 4396 0.391528 GCGCTGGCCCAAATTCATTT 60.392 50.000 0.00 0.00 0.00 2.32
3804 4397 1.643880 CGCTGGCCCAAATTCATTTC 58.356 50.000 0.00 0.00 0.00 2.17
3805 4398 1.740043 CGCTGGCCCAAATTCATTTCC 60.740 52.381 0.00 0.00 0.00 3.13
3806 4399 1.278699 GCTGGCCCAAATTCATTTCCA 59.721 47.619 0.00 0.00 0.00 3.53
3807 4400 2.290197 GCTGGCCCAAATTCATTTCCAA 60.290 45.455 0.00 0.00 0.00 3.53
3808 4401 3.622953 GCTGGCCCAAATTCATTTCCAAT 60.623 43.478 0.00 0.00 0.00 3.16
3809 4402 3.942748 CTGGCCCAAATTCATTTCCAATG 59.057 43.478 0.00 0.00 0.00 2.82
3810 4403 3.586174 TGGCCCAAATTCATTTCCAATGA 59.414 39.130 0.00 0.00 0.00 2.57
3811 4404 4.042560 TGGCCCAAATTCATTTCCAATGAA 59.957 37.500 13.00 13.00 41.59 2.57
3812 4405 4.395854 GGCCCAAATTCATTTCCAATGAAC 59.604 41.667 12.91 1.67 40.37 3.18
3813 4406 5.002516 GCCCAAATTCATTTCCAATGAACA 58.997 37.500 12.91 0.00 40.37 3.18
3814 4407 5.648960 GCCCAAATTCATTTCCAATGAACAT 59.351 36.000 12.91 4.38 40.37 2.71
3815 4408 6.822676 GCCCAAATTCATTTCCAATGAACATA 59.177 34.615 12.91 0.00 40.37 2.29
3816 4409 7.201635 GCCCAAATTCATTTCCAATGAACATAC 60.202 37.037 12.91 0.49 40.37 2.39
3817 4410 7.280652 CCCAAATTCATTTCCAATGAACATACC 59.719 37.037 12.91 0.00 40.37 2.73
3818 4411 7.010367 CCAAATTCATTTCCAATGAACATACCG 59.990 37.037 12.91 1.78 40.37 4.02
3819 4412 7.403312 AATTCATTTCCAATGAACATACCGA 57.597 32.000 12.91 0.00 40.37 4.69
3820 4413 6.825944 TTCATTTCCAATGAACATACCGAA 57.174 33.333 7.65 0.00 33.55 4.30
3821 4414 6.435430 TCATTTCCAATGAACATACCGAAG 57.565 37.500 0.00 0.00 0.00 3.79
3822 4415 6.127758 TTCATTTCCAATGAACATACCGAAGG 60.128 38.462 7.65 0.00 42.87 3.46
3823 4416 8.975827 TTCATTTCCAATGAACATACCGAAGGG 61.976 40.741 7.65 0.00 42.05 3.95
3840 4433 5.538118 CGAAGGGATACAGCACATAATACA 58.462 41.667 0.00 0.00 39.74 2.29
3841 4434 5.989168 CGAAGGGATACAGCACATAATACAA 59.011 40.000 0.00 0.00 39.74 2.41
3842 4435 6.073765 CGAAGGGATACAGCACATAATACAAC 60.074 42.308 0.00 0.00 39.74 3.32
3843 4436 6.247229 AGGGATACAGCACATAATACAACA 57.753 37.500 0.00 0.00 39.74 3.33
3844 4437 6.841601 AGGGATACAGCACATAATACAACAT 58.158 36.000 0.00 0.00 39.74 2.71
3845 4438 7.973402 AGGGATACAGCACATAATACAACATA 58.027 34.615 0.00 0.00 39.74 2.29
3846 4439 7.878127 AGGGATACAGCACATAATACAACATAC 59.122 37.037 0.00 0.00 39.74 2.39
3847 4440 7.659799 GGGATACAGCACATAATACAACATACA 59.340 37.037 0.00 0.00 39.74 2.29
3848 4441 8.712363 GGATACAGCACATAATACAACATACAG 58.288 37.037 0.00 0.00 0.00 2.74
3849 4442 6.363577 ACAGCACATAATACAACATACAGC 57.636 37.500 0.00 0.00 0.00 4.40
3850 4443 5.006649 ACAGCACATAATACAACATACAGCG 59.993 40.000 0.00 0.00 0.00 5.18
3851 4444 4.024893 AGCACATAATACAACATACAGCGC 60.025 41.667 0.00 0.00 0.00 5.92
3852 4445 4.024893 GCACATAATACAACATACAGCGCT 60.025 41.667 2.64 2.64 0.00 5.92
3853 4446 5.434706 CACATAATACAACATACAGCGCTG 58.565 41.667 34.89 34.89 0.00 5.18
3854 4447 5.234116 CACATAATACAACATACAGCGCTGA 59.766 40.000 42.03 25.68 0.00 4.26
3855 4448 5.991606 ACATAATACAACATACAGCGCTGAT 59.008 36.000 42.03 26.66 0.00 2.90
3856 4449 6.146184 ACATAATACAACATACAGCGCTGATC 59.854 38.462 42.03 0.00 0.00 2.92
3857 4450 2.680312 ACAACATACAGCGCTGATCT 57.320 45.000 42.03 23.49 0.00 2.75
3858 4451 2.544685 ACAACATACAGCGCTGATCTC 58.455 47.619 42.03 0.00 0.00 2.75
3859 4452 1.520174 CAACATACAGCGCTGATCTCG 59.480 52.381 42.03 25.33 0.00 4.04
3860 4453 0.031314 ACATACAGCGCTGATCTCGG 59.969 55.000 42.03 24.70 0.00 4.63
3861 4454 0.665670 CATACAGCGCTGATCTCGGG 60.666 60.000 42.03 19.42 0.00 5.14
3862 4455 0.823769 ATACAGCGCTGATCTCGGGA 60.824 55.000 42.03 10.66 0.00 5.14
3863 4456 1.035385 TACAGCGCTGATCTCGGGAA 61.035 55.000 42.03 13.12 0.00 3.97
3864 4457 1.591059 CAGCGCTGATCTCGGGAAG 60.591 63.158 33.66 0.00 0.00 3.46
3865 4458 1.754621 AGCGCTGATCTCGGGAAGA 60.755 57.895 10.39 0.00 38.72 2.87
3867 4460 2.010582 GCGCTGATCTCGGGAAGAGT 62.011 60.000 0.00 0.00 46.86 3.24
3868 4461 1.309950 CGCTGATCTCGGGAAGAGTA 58.690 55.000 0.00 0.00 46.86 2.59
3869 4462 1.265635 CGCTGATCTCGGGAAGAGTAG 59.734 57.143 0.00 0.00 46.86 2.57
3870 4463 2.577700 GCTGATCTCGGGAAGAGTAGA 58.422 52.381 0.00 0.00 46.86 2.59
3871 4464 2.952978 GCTGATCTCGGGAAGAGTAGAA 59.047 50.000 0.00 0.00 46.86 2.10
3872 4465 3.004315 GCTGATCTCGGGAAGAGTAGAAG 59.996 52.174 0.00 0.00 46.86 2.85
3873 4466 3.556999 TGATCTCGGGAAGAGTAGAAGG 58.443 50.000 0.00 0.00 46.86 3.46
3874 4467 1.765230 TCTCGGGAAGAGTAGAAGGC 58.235 55.000 0.00 0.00 46.86 4.35
3875 4468 0.747852 CTCGGGAAGAGTAGAAGGCC 59.252 60.000 0.00 0.00 41.99 5.19
3876 4469 0.335361 TCGGGAAGAGTAGAAGGCCT 59.665 55.000 0.00 0.00 0.00 5.19
3877 4470 0.461961 CGGGAAGAGTAGAAGGCCTG 59.538 60.000 5.69 0.00 0.00 4.85
3878 4471 0.833949 GGGAAGAGTAGAAGGCCTGG 59.166 60.000 5.69 0.00 0.00 4.45
3879 4472 1.622725 GGGAAGAGTAGAAGGCCTGGA 60.623 57.143 5.69 0.00 0.00 3.86
3880 4473 2.403561 GGAAGAGTAGAAGGCCTGGAT 58.596 52.381 5.69 0.00 0.00 3.41
3881 4474 2.774809 GGAAGAGTAGAAGGCCTGGATT 59.225 50.000 5.69 0.00 0.00 3.01
3882 4475 3.201045 GGAAGAGTAGAAGGCCTGGATTT 59.799 47.826 5.69 0.00 0.00 2.17
3883 4476 4.447290 GAAGAGTAGAAGGCCTGGATTTC 58.553 47.826 5.69 0.00 0.00 2.17
3884 4477 3.454858 AGAGTAGAAGGCCTGGATTTCA 58.545 45.455 5.69 0.00 0.00 2.69
3885 4478 3.846588 AGAGTAGAAGGCCTGGATTTCAA 59.153 43.478 5.69 0.00 0.00 2.69
3886 4479 4.080638 AGAGTAGAAGGCCTGGATTTCAAG 60.081 45.833 5.69 0.00 0.00 3.02
3887 4480 3.846588 AGTAGAAGGCCTGGATTTCAAGA 59.153 43.478 5.69 0.00 0.00 3.02
3888 4481 3.362870 AGAAGGCCTGGATTTCAAGAG 57.637 47.619 5.69 0.00 0.00 2.85
3889 4482 1.747924 GAAGGCCTGGATTTCAAGAGC 59.252 52.381 5.69 0.00 0.00 4.09
3890 4483 0.700564 AGGCCTGGATTTCAAGAGCA 59.299 50.000 3.11 0.00 0.00 4.26
3891 4484 1.287146 AGGCCTGGATTTCAAGAGCAT 59.713 47.619 3.11 0.00 0.00 3.79
3892 4485 1.680207 GGCCTGGATTTCAAGAGCATC 59.320 52.381 0.00 0.00 0.00 3.91
3903 4496 2.280052 GAGCATCTGAGCCCGAGC 60.280 66.667 0.00 0.00 40.32 5.03
3913 4506 4.379174 GCCCGAGCTCAGAAACAA 57.621 55.556 15.40 0.00 35.50 2.83
3914 4507 2.629002 GCCCGAGCTCAGAAACAAA 58.371 52.632 15.40 0.00 35.50 2.83
3915 4508 1.168714 GCCCGAGCTCAGAAACAAAT 58.831 50.000 15.40 0.00 35.50 2.32
3916 4509 1.541588 GCCCGAGCTCAGAAACAAATT 59.458 47.619 15.40 0.00 35.50 1.82
3917 4510 2.029918 GCCCGAGCTCAGAAACAAATTT 60.030 45.455 15.40 0.00 35.50 1.82
3918 4511 3.552890 GCCCGAGCTCAGAAACAAATTTT 60.553 43.478 15.40 0.00 35.50 1.82
3919 4512 4.229876 CCCGAGCTCAGAAACAAATTTTC 58.770 43.478 15.40 0.00 0.00 2.29
3920 4513 4.229876 CCGAGCTCAGAAACAAATTTTCC 58.770 43.478 15.40 0.00 0.00 3.13
3921 4514 4.229876 CGAGCTCAGAAACAAATTTTCCC 58.770 43.478 15.40 0.00 0.00 3.97
3922 4515 4.261572 CGAGCTCAGAAACAAATTTTCCCA 60.262 41.667 15.40 0.00 0.00 4.37
3923 4516 5.205759 AGCTCAGAAACAAATTTTCCCAG 57.794 39.130 0.00 0.00 0.00 4.45
3924 4517 4.039609 AGCTCAGAAACAAATTTTCCCAGG 59.960 41.667 0.00 0.00 0.00 4.45
3925 4518 4.202253 GCTCAGAAACAAATTTTCCCAGGT 60.202 41.667 0.00 0.00 0.00 4.00
3926 4519 5.275067 TCAGAAACAAATTTTCCCAGGTG 57.725 39.130 0.00 0.00 0.00 4.00
3927 4520 4.959210 TCAGAAACAAATTTTCCCAGGTGA 59.041 37.500 0.00 0.00 0.00 4.02
3928 4521 5.423610 TCAGAAACAAATTTTCCCAGGTGAA 59.576 36.000 0.00 0.00 0.00 3.18
3929 4522 6.070538 TCAGAAACAAATTTTCCCAGGTGAAA 60.071 34.615 0.00 0.26 32.60 2.69
3930 4523 6.037062 CAGAAACAAATTTTCCCAGGTGAAAC 59.963 38.462 3.30 0.00 34.13 2.78
3931 4524 5.428184 AACAAATTTTCCCAGGTGAAACA 57.572 34.783 3.30 0.00 39.98 2.83
3932 4525 5.428184 ACAAATTTTCCCAGGTGAAACAA 57.572 34.783 3.30 0.00 39.98 2.83
3933 4526 6.000246 ACAAATTTTCCCAGGTGAAACAAT 58.000 33.333 3.30 0.00 39.98 2.71
3934 4527 6.422333 ACAAATTTTCCCAGGTGAAACAATT 58.578 32.000 3.30 0.75 39.98 2.32
3935 4528 6.889177 ACAAATTTTCCCAGGTGAAACAATTT 59.111 30.769 3.30 5.46 39.98 1.82
3936 4529 7.395772 ACAAATTTTCCCAGGTGAAACAATTTT 59.604 29.630 3.30 1.08 39.98 1.82
3937 4530 7.953005 AATTTTCCCAGGTGAAACAATTTTT 57.047 28.000 3.30 0.00 39.98 1.94
3960 4553 9.733556 TTTTTATTGATGGTAGAGCTTTGTAGA 57.266 29.630 0.00 0.00 0.00 2.59
3961 4554 9.905713 TTTTATTGATGGTAGAGCTTTGTAGAT 57.094 29.630 0.00 0.00 0.00 1.98
3962 4555 8.893219 TTATTGATGGTAGAGCTTTGTAGATG 57.107 34.615 0.00 0.00 0.00 2.90
3963 4556 5.282055 TGATGGTAGAGCTTTGTAGATGG 57.718 43.478 0.00 0.00 0.00 3.51
3964 4557 4.716784 TGATGGTAGAGCTTTGTAGATGGT 59.283 41.667 0.00 0.00 0.00 3.55
3965 4558 5.189736 TGATGGTAGAGCTTTGTAGATGGTT 59.810 40.000 0.00 0.00 0.00 3.67
3966 4559 5.086104 TGGTAGAGCTTTGTAGATGGTTC 57.914 43.478 0.00 0.00 0.00 3.62
3967 4560 4.530553 TGGTAGAGCTTTGTAGATGGTTCA 59.469 41.667 0.00 0.00 0.00 3.18
3968 4561 5.112686 GGTAGAGCTTTGTAGATGGTTCAG 58.887 45.833 0.00 0.00 0.00 3.02
3969 4562 3.604582 AGAGCTTTGTAGATGGTTCAGC 58.395 45.455 0.00 0.00 0.00 4.26
3970 4563 2.680339 GAGCTTTGTAGATGGTTCAGCC 59.320 50.000 0.00 0.00 37.90 4.85
3978 4571 3.477582 TGGTTCAGCCACATCCGA 58.522 55.556 0.00 0.00 43.61 4.55
3979 4572 1.990424 TGGTTCAGCCACATCCGAT 59.010 52.632 0.00 0.00 43.61 4.18
3980 4573 0.392863 TGGTTCAGCCACATCCGATG 60.393 55.000 6.84 6.84 43.61 3.84
3981 4574 1.718757 GGTTCAGCCACATCCGATGC 61.719 60.000 8.36 0.00 37.17 3.91
3982 4575 1.451927 TTCAGCCACATCCGATGCC 60.452 57.895 8.36 0.00 0.00 4.40
3983 4576 2.124612 CAGCCACATCCGATGCCA 60.125 61.111 8.36 0.00 0.00 4.92
3984 4577 2.124570 AGCCACATCCGATGCCAC 60.125 61.111 8.36 0.00 0.00 5.01
3985 4578 3.576356 GCCACATCCGATGCCACG 61.576 66.667 8.36 0.00 0.00 4.94
3986 4579 2.186644 CCACATCCGATGCCACGA 59.813 61.111 8.36 0.00 35.09 4.35
3987 4580 1.449423 CCACATCCGATGCCACGAA 60.449 57.895 8.36 0.00 35.09 3.85
3988 4581 1.024046 CCACATCCGATGCCACGAAA 61.024 55.000 8.36 0.00 35.09 3.46
3989 4582 1.016627 CACATCCGATGCCACGAAAT 58.983 50.000 8.36 0.00 35.09 2.17
3990 4583 1.016627 ACATCCGATGCCACGAAATG 58.983 50.000 8.36 7.13 34.76 2.32
3991 4584 1.298602 CATCCGATGCCACGAAATGA 58.701 50.000 0.00 0.00 35.09 2.57
3992 4585 1.875514 CATCCGATGCCACGAAATGAT 59.124 47.619 0.00 0.00 35.09 2.45
3993 4586 2.036958 TCCGATGCCACGAAATGATT 57.963 45.000 0.00 0.00 35.09 2.57
3994 4587 1.670295 TCCGATGCCACGAAATGATTG 59.330 47.619 0.00 0.00 35.09 2.67
3995 4588 1.670295 CCGATGCCACGAAATGATTGA 59.330 47.619 0.00 0.00 35.09 2.57
3996 4589 2.286595 CCGATGCCACGAAATGATTGAG 60.287 50.000 0.00 0.00 35.09 3.02
3997 4590 2.609002 CGATGCCACGAAATGATTGAGA 59.391 45.455 0.00 0.00 35.09 3.27
3998 4591 3.063861 CGATGCCACGAAATGATTGAGAA 59.936 43.478 0.00 0.00 35.09 2.87
3999 4592 3.829886 TGCCACGAAATGATTGAGAAC 57.170 42.857 0.00 0.00 0.00 3.01
4000 4593 3.411446 TGCCACGAAATGATTGAGAACT 58.589 40.909 0.00 0.00 0.00 3.01
4001 4594 4.574892 TGCCACGAAATGATTGAGAACTA 58.425 39.130 0.00 0.00 0.00 2.24
4002 4595 4.631377 TGCCACGAAATGATTGAGAACTAG 59.369 41.667 0.00 0.00 0.00 2.57
4003 4596 4.870426 GCCACGAAATGATTGAGAACTAGA 59.130 41.667 0.00 0.00 0.00 2.43
4004 4597 5.351465 GCCACGAAATGATTGAGAACTAGAA 59.649 40.000 0.00 0.00 0.00 2.10
4005 4598 6.673316 GCCACGAAATGATTGAGAACTAGAAC 60.673 42.308 0.00 0.00 0.00 3.01
4006 4599 6.454318 CCACGAAATGATTGAGAACTAGAACG 60.454 42.308 0.00 0.00 0.00 3.95
4007 4600 5.577164 ACGAAATGATTGAGAACTAGAACGG 59.423 40.000 0.00 0.00 0.00 4.44
4008 4601 5.005779 CGAAATGATTGAGAACTAGAACGGG 59.994 44.000 0.00 0.00 0.00 5.28
4009 4602 3.887621 TGATTGAGAACTAGAACGGGG 57.112 47.619 0.00 0.00 0.00 5.73
4010 4603 3.170717 TGATTGAGAACTAGAACGGGGT 58.829 45.455 0.00 0.00 0.00 4.95
4011 4604 3.581332 TGATTGAGAACTAGAACGGGGTT 59.419 43.478 0.00 0.00 0.00 4.11
4012 4605 3.396260 TTGAGAACTAGAACGGGGTTG 57.604 47.619 0.00 0.00 0.00 3.77
4013 4606 2.600790 TGAGAACTAGAACGGGGTTGA 58.399 47.619 0.00 0.00 0.00 3.18
4014 4607 2.967201 TGAGAACTAGAACGGGGTTGAA 59.033 45.455 0.00 0.00 0.00 2.69
4015 4608 3.388676 TGAGAACTAGAACGGGGTTGAAA 59.611 43.478 0.00 0.00 0.00 2.69
4016 4609 4.041198 TGAGAACTAGAACGGGGTTGAAAT 59.959 41.667 0.00 0.00 0.00 2.17
4017 4610 4.324267 AGAACTAGAACGGGGTTGAAATG 58.676 43.478 0.00 0.00 0.00 2.32
4018 4611 2.433436 ACTAGAACGGGGTTGAAATGC 58.567 47.619 0.00 0.00 0.00 3.56
4019 4612 2.224670 ACTAGAACGGGGTTGAAATGCA 60.225 45.455 0.00 0.00 0.00 3.96
4020 4613 1.923356 AGAACGGGGTTGAAATGCAT 58.077 45.000 0.00 0.00 0.00 3.96
4021 4614 1.818674 AGAACGGGGTTGAAATGCATC 59.181 47.619 0.00 0.00 0.00 3.91
4022 4615 0.894835 AACGGGGTTGAAATGCATCC 59.105 50.000 0.00 0.00 35.92 3.51
4023 4616 0.039618 ACGGGGTTGAAATGCATCCT 59.960 50.000 0.00 0.00 36.72 3.24
4024 4617 1.283613 ACGGGGTTGAAATGCATCCTA 59.716 47.619 0.00 0.00 36.72 2.94
4025 4618 2.091885 ACGGGGTTGAAATGCATCCTAT 60.092 45.455 0.00 0.00 36.72 2.57
4026 4619 2.958355 CGGGGTTGAAATGCATCCTATT 59.042 45.455 0.00 0.00 36.72 1.73
4027 4620 4.141287 CGGGGTTGAAATGCATCCTATTA 58.859 43.478 0.00 0.00 36.72 0.98
4028 4621 4.766891 CGGGGTTGAAATGCATCCTATTAT 59.233 41.667 0.00 0.00 36.72 1.28
4029 4622 5.335897 CGGGGTTGAAATGCATCCTATTATG 60.336 44.000 0.00 0.00 36.72 1.90
4030 4623 5.539955 GGGGTTGAAATGCATCCTATTATGT 59.460 40.000 0.00 0.00 36.72 2.29
4031 4624 6.449698 GGGTTGAAATGCATCCTATTATGTG 58.550 40.000 0.00 0.00 36.72 3.21
4032 4625 5.922544 GGTTGAAATGCATCCTATTATGTGC 59.077 40.000 0.00 0.00 38.05 4.57
4037 4630 4.645863 TGCATCCTATTATGTGCATCCT 57.354 40.909 0.00 0.00 42.13 3.24
4038 4631 4.989277 TGCATCCTATTATGTGCATCCTT 58.011 39.130 0.00 0.00 42.13 3.36
4039 4632 4.763279 TGCATCCTATTATGTGCATCCTTG 59.237 41.667 0.00 0.00 42.13 3.61
4040 4633 4.763793 GCATCCTATTATGTGCATCCTTGT 59.236 41.667 0.00 0.00 37.52 3.16
4041 4634 5.939883 GCATCCTATTATGTGCATCCTTGTA 59.060 40.000 0.00 0.00 37.52 2.41
4042 4635 6.430925 GCATCCTATTATGTGCATCCTTGTAA 59.569 38.462 0.00 0.00 37.52 2.41
4043 4636 7.040478 GCATCCTATTATGTGCATCCTTGTAAA 60.040 37.037 0.00 0.00 37.52 2.01
4044 4637 7.801716 TCCTATTATGTGCATCCTTGTAAAC 57.198 36.000 0.00 0.00 0.00 2.01
4045 4638 7.342581 TCCTATTATGTGCATCCTTGTAAACA 58.657 34.615 0.00 0.00 0.00 2.83
4046 4639 7.498900 TCCTATTATGTGCATCCTTGTAAACAG 59.501 37.037 0.00 0.00 0.00 3.16
4047 4640 7.498900 CCTATTATGTGCATCCTTGTAAACAGA 59.501 37.037 0.00 0.00 0.00 3.41
4048 4641 6.494893 TTATGTGCATCCTTGTAAACAGAC 57.505 37.500 0.00 0.00 0.00 3.51
4049 4642 3.146066 TGTGCATCCTTGTAAACAGACC 58.854 45.455 0.00 0.00 0.00 3.85
4050 4643 2.488153 GTGCATCCTTGTAAACAGACCC 59.512 50.000 0.00 0.00 0.00 4.46
4051 4644 1.737793 GCATCCTTGTAAACAGACCCG 59.262 52.381 0.00 0.00 0.00 5.28
4052 4645 1.737793 CATCCTTGTAAACAGACCCGC 59.262 52.381 0.00 0.00 0.00 6.13
4053 4646 0.759959 TCCTTGTAAACAGACCCGCA 59.240 50.000 0.00 0.00 0.00 5.69
4054 4647 1.349688 TCCTTGTAAACAGACCCGCAT 59.650 47.619 0.00 0.00 0.00 4.73
4055 4648 2.568062 TCCTTGTAAACAGACCCGCATA 59.432 45.455 0.00 0.00 0.00 3.14
4056 4649 3.199071 TCCTTGTAAACAGACCCGCATAT 59.801 43.478 0.00 0.00 0.00 1.78
4057 4650 4.406326 TCCTTGTAAACAGACCCGCATATA 59.594 41.667 0.00 0.00 0.00 0.86
4058 4651 4.510340 CCTTGTAAACAGACCCGCATATAC 59.490 45.833 0.00 0.00 0.00 1.47
4059 4652 4.739587 TGTAAACAGACCCGCATATACA 57.260 40.909 0.00 0.00 0.00 2.29
4060 4653 5.284861 TGTAAACAGACCCGCATATACAT 57.715 39.130 0.00 0.00 0.00 2.29
4061 4654 5.053811 TGTAAACAGACCCGCATATACATG 58.946 41.667 0.00 0.00 35.07 3.21
4062 4655 3.838244 AACAGACCCGCATATACATGT 57.162 42.857 2.69 2.69 34.40 3.21
4063 4656 3.386768 ACAGACCCGCATATACATGTC 57.613 47.619 0.00 0.00 34.40 3.06
4064 4657 2.698274 ACAGACCCGCATATACATGTCA 59.302 45.455 0.00 0.00 34.40 3.58
4065 4658 3.243873 ACAGACCCGCATATACATGTCAG 60.244 47.826 0.00 0.00 34.40 3.51
4066 4659 2.965831 AGACCCGCATATACATGTCAGT 59.034 45.455 0.00 0.00 34.40 3.41
4067 4660 3.005897 AGACCCGCATATACATGTCAGTC 59.994 47.826 0.00 0.00 34.40 3.51
4068 4661 2.965831 ACCCGCATATACATGTCAGTCT 59.034 45.455 0.00 0.00 34.40 3.24
4069 4662 3.243873 ACCCGCATATACATGTCAGTCTG 60.244 47.826 0.00 0.00 34.40 3.51
4070 4663 3.243873 CCCGCATATACATGTCAGTCTGT 60.244 47.826 0.00 0.00 34.40 3.41
4071 4664 4.371786 CCGCATATACATGTCAGTCTGTT 58.628 43.478 0.00 0.00 34.40 3.16
4072 4665 4.209911 CCGCATATACATGTCAGTCTGTTG 59.790 45.833 0.00 0.00 34.40 3.33
4073 4666 4.318333 CGCATATACATGTCAGTCTGTTGC 60.318 45.833 0.00 1.28 34.40 4.17
4074 4667 4.571984 GCATATACATGTCAGTCTGTTGCA 59.428 41.667 0.00 0.00 34.40 4.08
4075 4668 5.237996 GCATATACATGTCAGTCTGTTGCAT 59.762 40.000 0.00 1.22 34.40 3.96
4076 4669 6.656003 CATATACATGTCAGTCTGTTGCATG 58.344 40.000 21.51 21.51 37.96 4.06
4077 4670 2.156917 ACATGTCAGTCTGTTGCATGG 58.843 47.619 24.21 14.34 37.14 3.66
4078 4671 1.135489 CATGTCAGTCTGTTGCATGGC 60.135 52.381 18.28 0.00 33.20 4.40
4079 4672 0.109153 TGTCAGTCTGTTGCATGGCT 59.891 50.000 0.00 0.00 0.00 4.75
4080 4673 1.242076 GTCAGTCTGTTGCATGGCTT 58.758 50.000 0.00 0.00 0.00 4.35
4081 4674 1.198637 GTCAGTCTGTTGCATGGCTTC 59.801 52.381 0.00 0.00 0.00 3.86
4082 4675 1.072806 TCAGTCTGTTGCATGGCTTCT 59.927 47.619 0.00 0.00 0.00 2.85
4083 4676 2.302733 TCAGTCTGTTGCATGGCTTCTA 59.697 45.455 0.00 0.00 0.00 2.10
4084 4677 2.417933 CAGTCTGTTGCATGGCTTCTAC 59.582 50.000 0.00 0.00 0.00 2.59
4085 4678 2.038952 AGTCTGTTGCATGGCTTCTACA 59.961 45.455 0.00 0.00 0.00 2.74
4086 4679 2.160417 GTCTGTTGCATGGCTTCTACAC 59.840 50.000 0.00 0.00 0.00 2.90
4087 4680 2.038952 TCTGTTGCATGGCTTCTACACT 59.961 45.455 0.00 0.00 0.00 3.55
4088 4681 3.260632 TCTGTTGCATGGCTTCTACACTA 59.739 43.478 0.00 0.00 0.00 2.74
4089 4682 4.080919 TCTGTTGCATGGCTTCTACACTAT 60.081 41.667 0.00 0.00 0.00 2.12
4090 4683 4.588899 TGTTGCATGGCTTCTACACTATT 58.411 39.130 0.00 0.00 0.00 1.73
4091 4684 5.009631 TGTTGCATGGCTTCTACACTATTT 58.990 37.500 0.00 0.00 0.00 1.40
4092 4685 5.476599 TGTTGCATGGCTTCTACACTATTTT 59.523 36.000 0.00 0.00 0.00 1.82
4093 4686 6.015519 TGTTGCATGGCTTCTACACTATTTTT 60.016 34.615 0.00 0.00 0.00 1.94
4094 4687 6.194796 TGCATGGCTTCTACACTATTTTTC 57.805 37.500 0.00 0.00 0.00 2.29
4095 4688 5.945784 TGCATGGCTTCTACACTATTTTTCT 59.054 36.000 0.00 0.00 0.00 2.52
4096 4689 6.434028 TGCATGGCTTCTACACTATTTTTCTT 59.566 34.615 0.00 0.00 0.00 2.52
4097 4690 7.039784 TGCATGGCTTCTACACTATTTTTCTTT 60.040 33.333 0.00 0.00 0.00 2.52
4098 4691 7.486232 GCATGGCTTCTACACTATTTTTCTTTC 59.514 37.037 0.00 0.00 0.00 2.62
4099 4692 7.129109 TGGCTTCTACACTATTTTTCTTTCG 57.871 36.000 0.00 0.00 0.00 3.46
4100 4693 6.932400 TGGCTTCTACACTATTTTTCTTTCGA 59.068 34.615 0.00 0.00 0.00 3.71
4101 4694 7.117812 TGGCTTCTACACTATTTTTCTTTCGAG 59.882 37.037 0.00 0.00 0.00 4.04
4102 4695 7.117956 GGCTTCTACACTATTTTTCTTTCGAGT 59.882 37.037 0.00 0.00 0.00 4.18
4103 4696 7.952637 GCTTCTACACTATTTTTCTTTCGAGTG 59.047 37.037 0.00 0.00 40.09 3.51
4104 4697 8.882415 TTCTACACTATTTTTCTTTCGAGTGT 57.118 30.769 10.06 10.06 46.74 3.55
4105 4698 8.882415 TCTACACTATTTTTCTTTCGAGTGTT 57.118 30.769 10.41 0.00 43.70 3.32
4106 4699 8.975439 TCTACACTATTTTTCTTTCGAGTGTTC 58.025 33.333 10.41 0.00 43.70 3.18
4107 4700 7.787725 ACACTATTTTTCTTTCGAGTGTTCT 57.212 32.000 0.00 0.00 43.70 3.01
4108 4701 8.882415 ACACTATTTTTCTTTCGAGTGTTCTA 57.118 30.769 0.00 0.00 43.70 2.10
4109 4702 9.490379 ACACTATTTTTCTTTCGAGTGTTCTAT 57.510 29.630 0.00 0.00 43.70 1.98
4114 4707 9.678941 ATTTTTCTTTCGAGTGTTCTATTTTCC 57.321 29.630 0.00 0.00 0.00 3.13
4115 4708 7.795482 TTTCTTTCGAGTGTTCTATTTTCCA 57.205 32.000 0.00 0.00 0.00 3.53
4116 4709 6.780706 TCTTTCGAGTGTTCTATTTTCCAC 57.219 37.500 0.00 0.00 0.00 4.02
4117 4710 6.522054 TCTTTCGAGTGTTCTATTTTCCACT 58.478 36.000 0.00 0.00 40.67 4.00
4118 4711 7.663827 TCTTTCGAGTGTTCTATTTTCCACTA 58.336 34.615 0.00 0.00 38.23 2.74
4119 4712 7.813148 TCTTTCGAGTGTTCTATTTTCCACTAG 59.187 37.037 0.00 0.00 38.23 2.57
4120 4713 6.585695 TCGAGTGTTCTATTTTCCACTAGT 57.414 37.500 0.00 0.00 38.23 2.57
4121 4714 6.989659 TCGAGTGTTCTATTTTCCACTAGTT 58.010 36.000 0.00 0.00 38.23 2.24
4122 4715 7.439381 TCGAGTGTTCTATTTTCCACTAGTTT 58.561 34.615 0.00 0.00 38.23 2.66
4123 4716 7.929785 TCGAGTGTTCTATTTTCCACTAGTTTT 59.070 33.333 0.00 0.00 38.23 2.43
4124 4717 8.557029 CGAGTGTTCTATTTTCCACTAGTTTTT 58.443 33.333 0.00 0.00 38.23 1.94
4144 4737 6.681729 TTTTTCTTAGCCTTCTACTCCAGA 57.318 37.500 0.00 0.00 0.00 3.86
4145 4738 5.923733 TTTCTTAGCCTTCTACTCCAGAG 57.076 43.478 0.00 0.00 33.83 3.35
4146 4739 4.864483 TCTTAGCCTTCTACTCCAGAGA 57.136 45.455 0.70 0.00 33.83 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 6.073440 ACGTAATCACCTACAATTTGACACAC 60.073 38.462 2.79 0.00 0.00 3.82
56 57 5.654603 ATTCTGTCACGTAATCACCTACA 57.345 39.130 0.00 0.00 0.00 2.74
57 58 8.347771 TGTATATTCTGTCACGTAATCACCTAC 58.652 37.037 0.00 0.00 0.00 3.18
60 61 6.420008 GGTGTATATTCTGTCACGTAATCACC 59.580 42.308 0.00 0.00 33.71 4.02
94 103 7.865706 ATCATGAGGTTATTCAACAGTTACC 57.134 36.000 0.09 0.00 36.29 2.85
103 112 7.558807 AGAGATGCAAAATCATGAGGTTATTCA 59.441 33.333 0.09 0.00 0.00 2.57
110 119 4.124970 TCGAGAGATGCAAAATCATGAGG 58.875 43.478 0.09 0.00 33.31 3.86
111 120 5.729974 TTCGAGAGATGCAAAATCATGAG 57.270 39.130 0.09 0.00 41.60 2.90
156 165 5.292345 CGTCATGATGTTTATTGGACGGTTA 59.708 40.000 6.77 0.00 41.89 2.85
160 169 3.546020 GCCGTCATGATGTTTATTGGACG 60.546 47.826 13.81 0.00 44.29 4.79
168 177 1.896220 ACTGTGCCGTCATGATGTTT 58.104 45.000 13.81 0.00 0.00 2.83
199 208 4.503314 GCCTGCATGCCTTTCGCC 62.503 66.667 16.68 0.00 36.24 5.54
201 210 1.870055 AACTGCCTGCATGCCTTTCG 61.870 55.000 16.68 3.50 0.00 3.46
280 289 8.818057 CAGTACATAGCACAATAGAGGTAAAAC 58.182 37.037 0.00 0.00 0.00 2.43
292 301 7.920160 TCAATCATTTCAGTACATAGCACAA 57.080 32.000 0.00 0.00 0.00 3.33
433 648 4.747108 AGTGTTTTGTCTCAATCTGTCTCG 59.253 41.667 0.00 0.00 0.00 4.04
434 649 6.258727 TCAAGTGTTTTGTCTCAATCTGTCTC 59.741 38.462 0.00 0.00 0.00 3.36
446 661 5.585047 AGACTAAGTGGTCAAGTGTTTTGTC 59.415 40.000 0.00 0.00 38.57 3.18
528 743 1.347707 AGAATGTGGACGTGATGTGGT 59.652 47.619 0.00 0.00 0.00 4.16
529 744 2.002586 GAGAATGTGGACGTGATGTGG 58.997 52.381 0.00 0.00 0.00 4.17
530 745 2.413112 GTGAGAATGTGGACGTGATGTG 59.587 50.000 0.00 0.00 0.00 3.21
531 746 2.612972 GGTGAGAATGTGGACGTGATGT 60.613 50.000 0.00 0.00 0.00 3.06
532 747 2.002586 GGTGAGAATGTGGACGTGATG 58.997 52.381 0.00 0.00 0.00 3.07
534 749 1.338107 AGGTGAGAATGTGGACGTGA 58.662 50.000 0.00 0.00 0.00 4.35
535 750 3.313012 TTAGGTGAGAATGTGGACGTG 57.687 47.619 0.00 0.00 0.00 4.49
536 751 4.345859 TTTTAGGTGAGAATGTGGACGT 57.654 40.909 0.00 0.00 0.00 4.34
569 786 1.637553 GGTGATGGGCCATATCCAGAT 59.362 52.381 21.26 0.00 37.75 2.90
575 792 0.108585 GTCGTGGTGATGGGCCATAT 59.891 55.000 21.26 0.00 38.40 1.78
672 889 3.695606 GTCTGCGGGAGTGCTGGA 61.696 66.667 0.00 0.00 34.88 3.86
722 939 3.325753 GCTGGAGGTCTGGGTGCT 61.326 66.667 0.00 0.00 0.00 4.40
792 1009 2.355115 GGCCAGGGATCACGGTTT 59.645 61.111 0.00 0.00 0.00 3.27
819 1036 0.036875 CACCGGAGAAGGAGGCTTTT 59.963 55.000 9.46 0.00 34.73 2.27
832 1049 2.037367 CCTCTCCACCTCACCGGA 59.963 66.667 9.46 0.00 36.31 5.14
873 1090 4.516195 GAAGCGAGACGGGAGGGC 62.516 72.222 0.00 0.00 0.00 5.19
938 1155 2.001361 AACTGTACGATCCGCCTCCG 62.001 60.000 0.00 0.00 0.00 4.63
948 1165 2.607771 GGGCGAAACAGTAACTGTACGA 60.608 50.000 7.76 0.00 44.62 3.43
954 1171 2.699954 CTGATGGGCGAAACAGTAACT 58.300 47.619 0.00 0.00 0.00 2.24
960 1177 0.035152 ATCTGCTGATGGGCGAAACA 60.035 50.000 5.15 0.00 34.52 2.83
961 1178 0.659957 GATCTGCTGATGGGCGAAAC 59.340 55.000 11.21 0.00 32.19 2.78
965 1182 1.953138 GTCGATCTGCTGATGGGCG 60.953 63.158 11.21 8.62 32.19 6.13
974 1191 1.424493 CGGGCTTGAAGTCGATCTGC 61.424 60.000 4.58 0.00 0.00 4.26
1031 1281 0.322975 ATCTTGTTGGCAGAGCGAGT 59.677 50.000 0.00 0.00 0.00 4.18
1035 1285 2.362736 TGATCATCTTGTTGGCAGAGC 58.637 47.619 0.00 0.00 0.00 4.09
1037 1287 4.397103 GTGAATGATCATCTTGTTGGCAGA 59.603 41.667 9.06 0.00 38.01 4.26
1072 1322 1.447838 GCCATGACCATGTCGACGT 60.448 57.895 11.62 7.97 37.11 4.34
1088 1338 1.416772 GTACCTCAGGTAGATTGGGCC 59.583 57.143 2.83 0.00 39.02 5.80
1101 1351 6.549433 AAGTACATTTTATCCCGTACCTCA 57.451 37.500 0.00 0.00 35.83 3.86
1342 1717 1.550524 AGATAAGTTCAGCTCGTGCCA 59.449 47.619 5.73 0.00 40.80 4.92
1382 1759 4.379499 GGAAGGTAAGTGCATTGTAAGTGC 60.379 45.833 0.00 0.00 42.81 4.40
1383 1760 5.003804 AGGAAGGTAAGTGCATTGTAAGTG 58.996 41.667 0.00 0.00 0.00 3.16
1384 1761 5.242795 AGGAAGGTAAGTGCATTGTAAGT 57.757 39.130 0.00 0.00 0.00 2.24
1385 1762 4.636206 GGAGGAAGGTAAGTGCATTGTAAG 59.364 45.833 0.00 0.00 0.00 2.34
1386 1763 4.042311 TGGAGGAAGGTAAGTGCATTGTAA 59.958 41.667 0.00 0.00 0.00 2.41
1387 1764 3.585289 TGGAGGAAGGTAAGTGCATTGTA 59.415 43.478 0.00 0.00 0.00 2.41
1388 1765 2.375174 TGGAGGAAGGTAAGTGCATTGT 59.625 45.455 0.00 0.00 0.00 2.71
1497 1874 6.764308 AAATAGTTGATCACTGGGATTGTG 57.236 37.500 0.00 0.00 36.00 3.33
1588 1974 0.894835 TGCGAGATACACAGGCAGAA 59.105 50.000 0.00 0.00 0.00 3.02
1880 2462 7.013274 ACACGGGAATTCATACATTTTCCTATG 59.987 37.037 7.93 0.00 38.15 2.23
2006 2589 2.019249 TCCATACAGATGCAGCTTTGC 58.981 47.619 0.00 0.00 0.00 3.68
2206 2789 3.823304 AGAAGTCAAAAATGGAGAGGTGC 59.177 43.478 0.00 0.00 0.00 5.01
2391 2974 6.260493 AATCTAATGATGTGAAGCTTCAGAGC 59.740 38.462 29.09 29.09 39.97 4.09
2408 2991 7.492669 ACGAGTCATAAACACTGGAATCTAATG 59.507 37.037 0.00 0.00 0.00 1.90
2506 3089 9.277783 GTAGATATTCAAGTGCTTTATGTGGAT 57.722 33.333 0.00 0.00 0.00 3.41
2533 3116 0.698238 CCCTCACCATCCTCACCAAA 59.302 55.000 0.00 0.00 0.00 3.28
2546 3129 2.675371 GGGTAACAGCCCCCTCAC 59.325 66.667 0.00 0.00 42.89 3.51
2565 3148 6.793478 AGCCAAGGATAAATAATCATAGGCA 58.207 36.000 0.00 0.00 43.23 4.75
2708 3294 3.192212 TCTGATCTACCTGCATAGCATCG 59.808 47.826 0.00 0.00 38.13 3.84
2843 3429 2.005451 AGCTCAACTATGCTCTTTGCG 58.995 47.619 0.00 0.00 46.63 4.85
3002 3594 5.500234 AGTGCTTTATGTGCTTCCAAGATA 58.500 37.500 0.00 0.00 0.00 1.98
3048 3640 3.071747 ACTGAAGAGGGAACTTTCTCCAC 59.928 47.826 0.00 0.00 44.43 4.02
3188 3780 3.429085 CAACACAGCAGAGAACAACAAC 58.571 45.455 0.00 0.00 0.00 3.32
3268 3861 5.761234 ACGCATAGAAAAACTGGTAACTTGA 59.239 36.000 0.00 0.00 37.61 3.02
3340 3933 4.873010 AGTCTTAGCTCTAATCCAGGTGA 58.127 43.478 0.00 0.00 0.00 4.02
3430 4023 5.215160 CCATTTGCGTTGATAAAGATAGGC 58.785 41.667 0.00 0.00 0.00 3.93
3470 4063 1.135575 CAAGCAACGAGAGCCAAATCC 60.136 52.381 0.00 0.00 0.00 3.01
3474 4067 0.603707 CTCCAAGCAACGAGAGCCAA 60.604 55.000 0.00 0.00 0.00 4.52
3475 4068 1.004560 CTCCAAGCAACGAGAGCCA 60.005 57.895 0.00 0.00 0.00 4.75
3476 4069 1.743252 CCTCCAAGCAACGAGAGCC 60.743 63.158 0.00 0.00 0.00 4.70
3477 4070 0.739112 CTCCTCCAAGCAACGAGAGC 60.739 60.000 0.00 0.00 0.00 4.09
3505 4098 3.415186 TGGAACAGATGGGGAGCC 58.585 61.111 0.00 0.00 0.00 4.70
3542 4135 4.449743 TGAGCTGAAAATTTGCAATTGAGC 59.550 37.500 10.34 12.92 0.00 4.26
3555 4148 6.591001 TGTATATATGCCAGTGAGCTGAAAA 58.409 36.000 0.00 0.00 45.28 2.29
3557 4150 5.806654 TGTATATATGCCAGTGAGCTGAA 57.193 39.130 0.00 0.00 45.28 3.02
3598 4191 2.492773 GCAGTTGCTTGGTGCCTGT 61.493 57.895 0.00 0.00 42.00 4.00
3613 4206 2.012673 GCCTAGACCAAATCACAGCAG 58.987 52.381 0.00 0.00 0.00 4.24
3650 4243 1.818674 GCCTTTTCCACACCCTACATG 59.181 52.381 0.00 0.00 0.00 3.21
3699 4292 1.271258 GATCTTCGCTTCGCTTCGC 59.729 57.895 0.00 0.00 0.00 4.70
3700 4293 0.992072 TTGATCTTCGCTTCGCTTCG 59.008 50.000 0.00 0.00 0.00 3.79
3701 4294 2.604914 TGATTGATCTTCGCTTCGCTTC 59.395 45.455 0.00 0.00 0.00 3.86
3702 4295 2.349886 GTGATTGATCTTCGCTTCGCTT 59.650 45.455 0.00 0.00 0.00 4.68
3728 4321 6.743575 AAAGAGGTTAATCCACTTCATTCG 57.256 37.500 7.04 0.00 44.22 3.34
3729 4322 7.814587 CCAAAAAGAGGTTAATCCACTTCATTC 59.185 37.037 7.04 0.00 44.22 2.67
3730 4323 7.670364 CCAAAAAGAGGTTAATCCACTTCATT 58.330 34.615 7.04 4.60 44.22 2.57
3731 4324 6.295292 GCCAAAAAGAGGTTAATCCACTTCAT 60.295 38.462 7.04 0.30 44.22 2.57
3732 4325 5.010617 GCCAAAAAGAGGTTAATCCACTTCA 59.989 40.000 7.04 0.00 44.22 3.02
3733 4326 5.010617 TGCCAAAAAGAGGTTAATCCACTTC 59.989 40.000 7.04 0.00 44.22 3.01
3734 4327 4.898861 TGCCAAAAAGAGGTTAATCCACTT 59.101 37.500 2.53 2.53 46.30 3.16
3735 4328 4.479158 TGCCAAAAAGAGGTTAATCCACT 58.521 39.130 0.00 0.00 38.75 4.00
3736 4329 4.864704 TGCCAAAAAGAGGTTAATCCAC 57.135 40.909 0.00 0.00 39.02 4.02
3737 4330 5.878406 TTTGCCAAAAAGAGGTTAATCCA 57.122 34.783 0.00 0.00 39.02 3.41
3738 4331 6.368791 GTCATTTGCCAAAAAGAGGTTAATCC 59.631 38.462 0.00 0.00 0.00 3.01
3739 4332 6.089417 CGTCATTTGCCAAAAAGAGGTTAATC 59.911 38.462 0.00 0.00 29.03 1.75
3740 4333 5.925969 CGTCATTTGCCAAAAAGAGGTTAAT 59.074 36.000 0.00 0.00 29.03 1.40
3741 4334 5.067936 TCGTCATTTGCCAAAAAGAGGTTAA 59.932 36.000 12.35 0.00 33.10 2.01
3742 4335 4.580995 TCGTCATTTGCCAAAAAGAGGTTA 59.419 37.500 12.35 0.00 33.10 2.85
3743 4336 3.383185 TCGTCATTTGCCAAAAAGAGGTT 59.617 39.130 12.35 0.00 33.10 3.50
3744 4337 2.955660 TCGTCATTTGCCAAAAAGAGGT 59.044 40.909 12.35 0.00 33.10 3.85
3745 4338 3.641437 TCGTCATTTGCCAAAAAGAGG 57.359 42.857 0.00 2.01 32.77 3.69
3746 4339 5.095490 GGTATCGTCATTTGCCAAAAAGAG 58.905 41.667 0.00 0.00 0.00 2.85
3747 4340 4.520874 TGGTATCGTCATTTGCCAAAAAGA 59.479 37.500 0.00 0.00 0.00 2.52
3748 4341 4.804108 TGGTATCGTCATTTGCCAAAAAG 58.196 39.130 0.00 0.00 0.00 2.27
3749 4342 4.855715 TGGTATCGTCATTTGCCAAAAA 57.144 36.364 0.00 0.00 0.00 1.94
3750 4343 4.551388 GTTGGTATCGTCATTTGCCAAAA 58.449 39.130 0.00 0.00 37.68 2.44
3751 4344 3.057174 GGTTGGTATCGTCATTTGCCAAA 60.057 43.478 0.00 0.00 37.68 3.28
3752 4345 2.490115 GGTTGGTATCGTCATTTGCCAA 59.510 45.455 0.00 0.00 34.12 4.52
3753 4346 2.088423 GGTTGGTATCGTCATTTGCCA 58.912 47.619 0.00 0.00 0.00 4.92
3754 4347 2.088423 TGGTTGGTATCGTCATTTGCC 58.912 47.619 0.00 0.00 0.00 4.52
3755 4348 2.747446 ACTGGTTGGTATCGTCATTTGC 59.253 45.455 0.00 0.00 0.00 3.68
3756 4349 6.677781 ATTACTGGTTGGTATCGTCATTTG 57.322 37.500 0.00 0.00 0.00 2.32
3757 4350 8.795842 TTTATTACTGGTTGGTATCGTCATTT 57.204 30.769 0.00 0.00 0.00 2.32
3758 4351 8.836413 CATTTATTACTGGTTGGTATCGTCATT 58.164 33.333 0.00 0.00 0.00 2.57
3759 4352 7.041372 GCATTTATTACTGGTTGGTATCGTCAT 60.041 37.037 0.00 0.00 0.00 3.06
3760 4353 6.259167 GCATTTATTACTGGTTGGTATCGTCA 59.741 38.462 0.00 0.00 0.00 4.35
3761 4354 6.563381 CGCATTTATTACTGGTTGGTATCGTC 60.563 42.308 0.00 0.00 0.00 4.20
3762 4355 5.235616 CGCATTTATTACTGGTTGGTATCGT 59.764 40.000 0.00 0.00 0.00 3.73
3763 4356 5.675970 CGCATTTATTACTGGTTGGTATCG 58.324 41.667 0.00 0.00 0.00 2.92
3764 4357 5.238650 AGCGCATTTATTACTGGTTGGTATC 59.761 40.000 11.47 0.00 0.00 2.24
3765 4358 5.008613 CAGCGCATTTATTACTGGTTGGTAT 59.991 40.000 11.47 0.00 0.00 2.73
3766 4359 4.334203 CAGCGCATTTATTACTGGTTGGTA 59.666 41.667 11.47 0.00 0.00 3.25
3767 4360 3.128589 CAGCGCATTTATTACTGGTTGGT 59.871 43.478 11.47 0.00 0.00 3.67
3768 4361 3.489059 CCAGCGCATTTATTACTGGTTGG 60.489 47.826 11.47 0.00 42.42 3.77
3769 4362 3.694734 CCAGCGCATTTATTACTGGTTG 58.305 45.455 11.47 0.00 42.42 3.77
3773 4366 1.001378 GGGCCAGCGCATTTATTACTG 60.001 52.381 11.47 0.00 36.38 2.74
3774 4367 1.318576 GGGCCAGCGCATTTATTACT 58.681 50.000 11.47 0.00 36.38 2.24
3775 4368 1.028905 TGGGCCAGCGCATTTATTAC 58.971 50.000 11.47 0.00 36.38 1.89
3776 4369 1.769026 TTGGGCCAGCGCATTTATTA 58.231 45.000 11.47 0.00 38.65 0.98
3777 4370 0.901124 TTTGGGCCAGCGCATTTATT 59.099 45.000 11.47 0.00 38.65 1.40
3778 4371 1.122227 ATTTGGGCCAGCGCATTTAT 58.878 45.000 11.47 2.52 38.65 1.40
3779 4372 0.901124 AATTTGGGCCAGCGCATTTA 59.099 45.000 11.47 0.23 38.65 1.40
3780 4373 0.391528 GAATTTGGGCCAGCGCATTT 60.392 50.000 11.47 7.53 38.65 2.32
3781 4374 1.218854 GAATTTGGGCCAGCGCATT 59.781 52.632 11.47 4.15 38.65 3.56
3782 4375 1.332144 ATGAATTTGGGCCAGCGCAT 61.332 50.000 11.47 6.87 38.65 4.73
3783 4376 1.543065 AATGAATTTGGGCCAGCGCA 61.543 50.000 11.47 5.15 36.38 6.09
3784 4377 0.391528 AAATGAATTTGGGCCAGCGC 60.392 50.000 6.23 0.00 0.00 5.92
3785 4378 1.643880 GAAATGAATTTGGGCCAGCG 58.356 50.000 6.23 0.00 0.00 5.18
3786 4379 1.278699 TGGAAATGAATTTGGGCCAGC 59.721 47.619 6.23 0.00 0.00 4.85
3787 4380 3.699411 TTGGAAATGAATTTGGGCCAG 57.301 42.857 6.23 0.00 0.00 4.85
3788 4381 3.586174 TCATTGGAAATGAATTTGGGCCA 59.414 39.130 0.00 0.00 0.00 5.36
3789 4382 4.219264 TCATTGGAAATGAATTTGGGCC 57.781 40.909 0.00 0.00 0.00 5.80
3790 4383 5.002516 TGTTCATTGGAAATGAATTTGGGC 58.997 37.500 16.13 5.59 39.80 5.36
3791 4384 7.280652 GGTATGTTCATTGGAAATGAATTTGGG 59.719 37.037 16.13 0.00 39.80 4.12
3792 4385 7.010367 CGGTATGTTCATTGGAAATGAATTTGG 59.990 37.037 16.13 3.97 39.80 3.28
3793 4386 7.758980 TCGGTATGTTCATTGGAAATGAATTTG 59.241 33.333 16.13 6.43 39.80 2.32
3794 4387 7.835822 TCGGTATGTTCATTGGAAATGAATTT 58.164 30.769 16.13 10.47 39.80 1.82
3795 4388 7.403312 TCGGTATGTTCATTGGAAATGAATT 57.597 32.000 16.13 10.74 39.80 2.17
3796 4389 7.403312 TTCGGTATGTTCATTGGAAATGAAT 57.597 32.000 16.13 6.42 39.80 2.57
3797 4390 6.127758 CCTTCGGTATGTTCATTGGAAATGAA 60.128 38.462 10.56 10.56 34.13 2.57
3798 4391 5.356751 CCTTCGGTATGTTCATTGGAAATGA 59.643 40.000 0.00 0.00 34.13 2.57
3799 4392 5.450412 CCCTTCGGTATGTTCATTGGAAATG 60.450 44.000 0.00 0.00 34.13 2.32
3800 4393 4.644685 CCCTTCGGTATGTTCATTGGAAAT 59.355 41.667 0.00 0.00 34.13 2.17
3801 4394 4.013728 CCCTTCGGTATGTTCATTGGAAA 58.986 43.478 0.00 0.00 34.13 3.13
3802 4395 3.264706 TCCCTTCGGTATGTTCATTGGAA 59.735 43.478 0.00 0.00 0.00 3.53
3803 4396 2.841266 TCCCTTCGGTATGTTCATTGGA 59.159 45.455 0.00 0.00 0.00 3.53
3804 4397 3.275617 TCCCTTCGGTATGTTCATTGG 57.724 47.619 0.00 0.00 0.00 3.16
3805 4398 5.364778 TGTATCCCTTCGGTATGTTCATTG 58.635 41.667 0.00 0.00 0.00 2.82
3806 4399 5.611374 CTGTATCCCTTCGGTATGTTCATT 58.389 41.667 0.00 0.00 0.00 2.57
3807 4400 4.503296 GCTGTATCCCTTCGGTATGTTCAT 60.503 45.833 0.00 0.00 0.00 2.57
3808 4401 3.181469 GCTGTATCCCTTCGGTATGTTCA 60.181 47.826 0.00 0.00 0.00 3.18
3809 4402 3.181469 TGCTGTATCCCTTCGGTATGTTC 60.181 47.826 0.00 0.00 0.00 3.18
3810 4403 2.769663 TGCTGTATCCCTTCGGTATGTT 59.230 45.455 0.00 0.00 0.00 2.71
3811 4404 2.102588 GTGCTGTATCCCTTCGGTATGT 59.897 50.000 0.00 0.00 0.00 2.29
3812 4405 2.102420 TGTGCTGTATCCCTTCGGTATG 59.898 50.000 0.00 0.00 0.00 2.39
3813 4406 2.394632 TGTGCTGTATCCCTTCGGTAT 58.605 47.619 0.00 0.00 0.00 2.73
3814 4407 1.855295 TGTGCTGTATCCCTTCGGTA 58.145 50.000 0.00 0.00 0.00 4.02
3815 4408 1.204146 ATGTGCTGTATCCCTTCGGT 58.796 50.000 0.00 0.00 0.00 4.69
3816 4409 3.469008 TTATGTGCTGTATCCCTTCGG 57.531 47.619 0.00 0.00 0.00 4.30
3817 4410 5.538118 TGTATTATGTGCTGTATCCCTTCG 58.462 41.667 0.00 0.00 0.00 3.79
3818 4411 6.765989 TGTTGTATTATGTGCTGTATCCCTTC 59.234 38.462 0.00 0.00 0.00 3.46
3819 4412 6.658849 TGTTGTATTATGTGCTGTATCCCTT 58.341 36.000 0.00 0.00 0.00 3.95
3820 4413 6.247229 TGTTGTATTATGTGCTGTATCCCT 57.753 37.500 0.00 0.00 0.00 4.20
3821 4414 7.659799 TGTATGTTGTATTATGTGCTGTATCCC 59.340 37.037 0.00 0.00 0.00 3.85
3822 4415 8.601845 TGTATGTTGTATTATGTGCTGTATCC 57.398 34.615 0.00 0.00 0.00 2.59
3823 4416 8.223769 GCTGTATGTTGTATTATGTGCTGTATC 58.776 37.037 0.00 0.00 0.00 2.24
3824 4417 7.095649 CGCTGTATGTTGTATTATGTGCTGTAT 60.096 37.037 0.00 0.00 0.00 2.29
3825 4418 6.200097 CGCTGTATGTTGTATTATGTGCTGTA 59.800 38.462 0.00 0.00 0.00 2.74
3826 4419 5.006649 CGCTGTATGTTGTATTATGTGCTGT 59.993 40.000 0.00 0.00 0.00 4.40
3827 4420 5.434706 CGCTGTATGTTGTATTATGTGCTG 58.565 41.667 0.00 0.00 0.00 4.41
3828 4421 4.024893 GCGCTGTATGTTGTATTATGTGCT 60.025 41.667 0.00 0.00 0.00 4.40
3829 4422 4.024893 AGCGCTGTATGTTGTATTATGTGC 60.025 41.667 10.39 0.00 0.00 4.57
3830 4423 5.234116 TCAGCGCTGTATGTTGTATTATGTG 59.766 40.000 34.70 5.77 0.00 3.21
3831 4424 5.356426 TCAGCGCTGTATGTTGTATTATGT 58.644 37.500 34.70 0.00 0.00 2.29
3832 4425 5.905480 TCAGCGCTGTATGTTGTATTATG 57.095 39.130 34.70 6.55 0.00 1.90
3833 4426 6.459066 AGATCAGCGCTGTATGTTGTATTAT 58.541 36.000 34.70 17.42 0.00 1.28
3834 4427 5.842907 AGATCAGCGCTGTATGTTGTATTA 58.157 37.500 34.70 13.20 0.00 0.98
3835 4428 4.697514 AGATCAGCGCTGTATGTTGTATT 58.302 39.130 34.70 9.52 0.00 1.89
3836 4429 4.302455 GAGATCAGCGCTGTATGTTGTAT 58.698 43.478 34.70 19.40 0.00 2.29
3837 4430 3.706698 GAGATCAGCGCTGTATGTTGTA 58.293 45.455 34.70 15.28 0.00 2.41
3838 4431 2.544685 GAGATCAGCGCTGTATGTTGT 58.455 47.619 34.70 15.20 0.00 3.32
3839 4432 1.520174 CGAGATCAGCGCTGTATGTTG 59.480 52.381 34.70 23.06 0.00 3.33
3840 4433 1.536922 CCGAGATCAGCGCTGTATGTT 60.537 52.381 34.70 17.89 0.00 2.71
3841 4434 0.031314 CCGAGATCAGCGCTGTATGT 59.969 55.000 34.70 24.10 0.00 2.29
3842 4435 0.665670 CCCGAGATCAGCGCTGTATG 60.666 60.000 34.70 20.62 0.00 2.39
3843 4436 0.823769 TCCCGAGATCAGCGCTGTAT 60.824 55.000 34.70 25.68 0.00 2.29
3844 4437 1.035385 TTCCCGAGATCAGCGCTGTA 61.035 55.000 34.70 22.36 0.00 2.74
3845 4438 2.290122 CTTCCCGAGATCAGCGCTGT 62.290 60.000 34.70 22.79 0.00 4.40
3846 4439 1.591059 CTTCCCGAGATCAGCGCTG 60.591 63.158 31.53 31.53 0.00 5.18
3847 4440 1.733402 CTCTTCCCGAGATCAGCGCT 61.733 60.000 2.64 2.64 42.62 5.92
3848 4441 1.299773 CTCTTCCCGAGATCAGCGC 60.300 63.158 0.00 0.00 42.62 5.92
3849 4442 1.265635 CTACTCTTCCCGAGATCAGCG 59.734 57.143 0.00 0.00 42.62 5.18
3850 4443 2.577700 TCTACTCTTCCCGAGATCAGC 58.422 52.381 0.00 0.00 42.62 4.26
3851 4444 3.568007 CCTTCTACTCTTCCCGAGATCAG 59.432 52.174 0.00 0.00 42.62 2.90
3852 4445 3.556999 CCTTCTACTCTTCCCGAGATCA 58.443 50.000 0.00 0.00 42.62 2.92
3853 4446 2.295070 GCCTTCTACTCTTCCCGAGATC 59.705 54.545 0.00 0.00 42.62 2.75
3854 4447 2.312390 GCCTTCTACTCTTCCCGAGAT 58.688 52.381 0.00 0.00 42.62 2.75
3855 4448 1.685491 GGCCTTCTACTCTTCCCGAGA 60.685 57.143 0.00 0.00 42.62 4.04
3856 4449 0.747852 GGCCTTCTACTCTTCCCGAG 59.252 60.000 0.00 0.00 45.56 4.63
3857 4450 0.335361 AGGCCTTCTACTCTTCCCGA 59.665 55.000 0.00 0.00 0.00 5.14
3858 4451 0.461961 CAGGCCTTCTACTCTTCCCG 59.538 60.000 0.00 0.00 0.00 5.14
3859 4452 0.833949 CCAGGCCTTCTACTCTTCCC 59.166 60.000 0.00 0.00 0.00 3.97
3860 4453 1.867363 TCCAGGCCTTCTACTCTTCC 58.133 55.000 0.00 0.00 0.00 3.46
3861 4454 4.080863 TGAAATCCAGGCCTTCTACTCTTC 60.081 45.833 0.00 0.47 0.00 2.87
3862 4455 3.846588 TGAAATCCAGGCCTTCTACTCTT 59.153 43.478 0.00 0.00 0.00 2.85
3863 4456 3.454858 TGAAATCCAGGCCTTCTACTCT 58.545 45.455 0.00 0.00 0.00 3.24
3864 4457 3.914426 TGAAATCCAGGCCTTCTACTC 57.086 47.619 0.00 0.00 0.00 2.59
3865 4458 3.846588 TCTTGAAATCCAGGCCTTCTACT 59.153 43.478 0.00 0.00 0.00 2.57
3866 4459 4.195416 CTCTTGAAATCCAGGCCTTCTAC 58.805 47.826 0.00 0.00 0.00 2.59
3867 4460 3.370953 GCTCTTGAAATCCAGGCCTTCTA 60.371 47.826 0.00 0.00 0.00 2.10
3868 4461 2.620108 GCTCTTGAAATCCAGGCCTTCT 60.620 50.000 0.00 0.00 0.00 2.85
3869 4462 1.747924 GCTCTTGAAATCCAGGCCTTC 59.252 52.381 0.00 0.00 0.00 3.46
3870 4463 1.076024 TGCTCTTGAAATCCAGGCCTT 59.924 47.619 0.00 0.00 0.00 4.35
3871 4464 0.700564 TGCTCTTGAAATCCAGGCCT 59.299 50.000 0.00 0.00 0.00 5.19
3872 4465 1.680207 GATGCTCTTGAAATCCAGGCC 59.320 52.381 0.00 0.00 0.00 5.19
3873 4466 2.358267 CAGATGCTCTTGAAATCCAGGC 59.642 50.000 0.00 0.00 0.00 4.85
3874 4467 3.878103 CTCAGATGCTCTTGAAATCCAGG 59.122 47.826 0.00 0.00 0.00 4.45
3875 4468 3.312973 GCTCAGATGCTCTTGAAATCCAG 59.687 47.826 0.00 0.00 0.00 3.86
3876 4469 3.276857 GCTCAGATGCTCTTGAAATCCA 58.723 45.455 0.00 0.00 0.00 3.41
3877 4470 2.617774 GGCTCAGATGCTCTTGAAATCC 59.382 50.000 0.00 0.00 0.00 3.01
3878 4471 2.617774 GGGCTCAGATGCTCTTGAAATC 59.382 50.000 0.00 0.00 0.00 2.17
3879 4472 2.652590 GGGCTCAGATGCTCTTGAAAT 58.347 47.619 0.00 0.00 0.00 2.17
3880 4473 1.676916 CGGGCTCAGATGCTCTTGAAA 60.677 52.381 0.00 0.00 0.00 2.69
3881 4474 0.107993 CGGGCTCAGATGCTCTTGAA 60.108 55.000 0.00 0.00 0.00 2.69
3882 4475 0.972471 TCGGGCTCAGATGCTCTTGA 60.972 55.000 0.00 0.00 0.00 3.02
3883 4476 0.530211 CTCGGGCTCAGATGCTCTTG 60.530 60.000 0.00 0.00 0.00 3.02
3884 4477 1.821936 CTCGGGCTCAGATGCTCTT 59.178 57.895 0.00 0.00 0.00 2.85
3885 4478 2.795110 GCTCGGGCTCAGATGCTCT 61.795 63.158 0.00 0.00 35.22 4.09
3886 4479 2.280052 GCTCGGGCTCAGATGCTC 60.280 66.667 0.00 0.00 35.22 4.26
3896 4489 1.168714 ATTTGTTTCTGAGCTCGGGC 58.831 50.000 22.38 0.00 39.06 6.13
3897 4490 3.923017 AAATTTGTTTCTGAGCTCGGG 57.077 42.857 22.38 11.19 0.00 5.14
3898 4491 4.229876 GGAAAATTTGTTTCTGAGCTCGG 58.770 43.478 16.98 16.98 0.00 4.63
3899 4492 4.229876 GGGAAAATTTGTTTCTGAGCTCG 58.770 43.478 9.64 4.19 0.00 5.03
3900 4493 5.200368 TGGGAAAATTTGTTTCTGAGCTC 57.800 39.130 6.82 6.82 0.00 4.09
3901 4494 4.039609 CCTGGGAAAATTTGTTTCTGAGCT 59.960 41.667 0.00 0.00 0.00 4.09
3902 4495 4.202253 ACCTGGGAAAATTTGTTTCTGAGC 60.202 41.667 0.00 0.00 0.00 4.26
3903 4496 5.068987 TCACCTGGGAAAATTTGTTTCTGAG 59.931 40.000 0.00 0.00 0.00 3.35
3904 4497 4.959210 TCACCTGGGAAAATTTGTTTCTGA 59.041 37.500 0.00 0.00 0.00 3.27
3905 4498 5.275067 TCACCTGGGAAAATTTGTTTCTG 57.725 39.130 0.00 0.00 0.00 3.02
3906 4499 5.948742 TTCACCTGGGAAAATTTGTTTCT 57.051 34.783 0.00 0.00 0.00 2.52
3907 4500 5.877564 TGTTTCACCTGGGAAAATTTGTTTC 59.122 36.000 10.60 0.00 38.41 2.78
3908 4501 5.810095 TGTTTCACCTGGGAAAATTTGTTT 58.190 33.333 10.60 0.00 38.41 2.83
3909 4502 5.428184 TGTTTCACCTGGGAAAATTTGTT 57.572 34.783 10.60 0.00 38.41 2.83
3910 4503 5.428184 TTGTTTCACCTGGGAAAATTTGT 57.572 34.783 10.60 0.00 38.41 2.83
3911 4504 6.940831 AATTGTTTCACCTGGGAAAATTTG 57.059 33.333 10.60 0.00 38.41 2.32
3912 4505 7.953005 AAAATTGTTTCACCTGGGAAAATTT 57.047 28.000 10.60 10.78 38.41 1.82
3913 4506 7.953005 AAAAATTGTTTCACCTGGGAAAATT 57.047 28.000 10.60 6.76 38.41 1.82
3934 4527 9.733556 TCTACAAAGCTCTACCATCAATAAAAA 57.266 29.630 0.00 0.00 0.00 1.94
3935 4528 9.905713 ATCTACAAAGCTCTACCATCAATAAAA 57.094 29.630 0.00 0.00 0.00 1.52
3936 4529 9.330063 CATCTACAAAGCTCTACCATCAATAAA 57.670 33.333 0.00 0.00 0.00 1.40
3937 4530 7.933577 CCATCTACAAAGCTCTACCATCAATAA 59.066 37.037 0.00 0.00 0.00 1.40
3938 4531 7.071196 ACCATCTACAAAGCTCTACCATCAATA 59.929 37.037 0.00 0.00 0.00 1.90
3939 4532 6.126652 ACCATCTACAAAGCTCTACCATCAAT 60.127 38.462 0.00 0.00 0.00 2.57
3940 4533 5.189736 ACCATCTACAAAGCTCTACCATCAA 59.810 40.000 0.00 0.00 0.00 2.57
3941 4534 4.716784 ACCATCTACAAAGCTCTACCATCA 59.283 41.667 0.00 0.00 0.00 3.07
3942 4535 5.283457 ACCATCTACAAAGCTCTACCATC 57.717 43.478 0.00 0.00 0.00 3.51
3943 4536 5.189736 TGAACCATCTACAAAGCTCTACCAT 59.810 40.000 0.00 0.00 0.00 3.55
3944 4537 4.530553 TGAACCATCTACAAAGCTCTACCA 59.469 41.667 0.00 0.00 0.00 3.25
3945 4538 5.086104 TGAACCATCTACAAAGCTCTACC 57.914 43.478 0.00 0.00 0.00 3.18
3946 4539 4.568760 GCTGAACCATCTACAAAGCTCTAC 59.431 45.833 0.00 0.00 0.00 2.59
3947 4540 4.383118 GGCTGAACCATCTACAAAGCTCTA 60.383 45.833 0.00 0.00 38.86 2.43
3948 4541 3.604582 GCTGAACCATCTACAAAGCTCT 58.395 45.455 0.00 0.00 0.00 4.09
3949 4542 2.680339 GGCTGAACCATCTACAAAGCTC 59.320 50.000 0.00 0.00 38.86 4.09
3950 4543 2.040278 TGGCTGAACCATCTACAAAGCT 59.960 45.455 0.00 0.00 46.36 3.74
3951 4544 2.436417 TGGCTGAACCATCTACAAAGC 58.564 47.619 0.00 0.00 46.36 3.51
3962 4555 1.718757 GCATCGGATGTGGCTGAACC 61.719 60.000 18.54 0.00 39.84 3.62
3963 4556 1.718757 GGCATCGGATGTGGCTGAAC 61.719 60.000 18.54 0.25 38.91 3.18
3964 4557 1.451927 GGCATCGGATGTGGCTGAA 60.452 57.895 18.54 0.00 38.91 3.02
3965 4558 2.190313 GGCATCGGATGTGGCTGA 59.810 61.111 18.54 0.00 38.91 4.26
3966 4559 2.124612 TGGCATCGGATGTGGCTG 60.125 61.111 18.54 0.00 42.13 4.85
3967 4560 2.124570 GTGGCATCGGATGTGGCT 60.125 61.111 18.54 0.00 42.13 4.75
3968 4561 3.576356 CGTGGCATCGGATGTGGC 61.576 66.667 18.54 8.84 41.99 5.01
3969 4562 1.024046 TTTCGTGGCATCGGATGTGG 61.024 55.000 18.54 6.61 0.00 4.17
3970 4563 1.016627 ATTTCGTGGCATCGGATGTG 58.983 50.000 18.54 7.41 0.00 3.21
3971 4564 1.016627 CATTTCGTGGCATCGGATGT 58.983 50.000 18.54 0.00 0.00 3.06
3972 4565 1.298602 TCATTTCGTGGCATCGGATG 58.701 50.000 13.63 13.63 0.00 3.51
3973 4566 2.260844 ATCATTTCGTGGCATCGGAT 57.739 45.000 9.05 0.00 0.00 4.18
3974 4567 1.670295 CAATCATTTCGTGGCATCGGA 59.330 47.619 9.05 0.00 0.00 4.55
3975 4568 1.670295 TCAATCATTTCGTGGCATCGG 59.330 47.619 9.05 0.00 0.00 4.18
3976 4569 2.609002 TCTCAATCATTTCGTGGCATCG 59.391 45.455 0.00 0.00 0.00 3.84
3977 4570 4.095483 AGTTCTCAATCATTTCGTGGCATC 59.905 41.667 0.00 0.00 0.00 3.91
3978 4571 4.012374 AGTTCTCAATCATTTCGTGGCAT 58.988 39.130 0.00 0.00 0.00 4.40
3979 4572 3.411446 AGTTCTCAATCATTTCGTGGCA 58.589 40.909 0.00 0.00 0.00 4.92
3980 4573 4.870426 TCTAGTTCTCAATCATTTCGTGGC 59.130 41.667 0.00 0.00 0.00 5.01
3981 4574 6.454318 CGTTCTAGTTCTCAATCATTTCGTGG 60.454 42.308 0.00 0.00 0.00 4.94
3982 4575 6.454318 CCGTTCTAGTTCTCAATCATTTCGTG 60.454 42.308 0.00 0.00 0.00 4.35
3983 4576 5.577164 CCGTTCTAGTTCTCAATCATTTCGT 59.423 40.000 0.00 0.00 0.00 3.85
3984 4577 5.005779 CCCGTTCTAGTTCTCAATCATTTCG 59.994 44.000 0.00 0.00 0.00 3.46
3985 4578 5.294552 CCCCGTTCTAGTTCTCAATCATTTC 59.705 44.000 0.00 0.00 0.00 2.17
3986 4579 5.186198 CCCCGTTCTAGTTCTCAATCATTT 58.814 41.667 0.00 0.00 0.00 2.32
3987 4580 4.225267 ACCCCGTTCTAGTTCTCAATCATT 59.775 41.667 0.00 0.00 0.00 2.57
3988 4581 3.775316 ACCCCGTTCTAGTTCTCAATCAT 59.225 43.478 0.00 0.00 0.00 2.45
3989 4582 3.170717 ACCCCGTTCTAGTTCTCAATCA 58.829 45.455 0.00 0.00 0.00 2.57
3990 4583 3.889520 ACCCCGTTCTAGTTCTCAATC 57.110 47.619 0.00 0.00 0.00 2.67
3991 4584 3.581332 TCAACCCCGTTCTAGTTCTCAAT 59.419 43.478 0.00 0.00 0.00 2.57
3992 4585 2.967201 TCAACCCCGTTCTAGTTCTCAA 59.033 45.455 0.00 0.00 0.00 3.02
3993 4586 2.600790 TCAACCCCGTTCTAGTTCTCA 58.399 47.619 0.00 0.00 0.00 3.27
3994 4587 3.672767 TTCAACCCCGTTCTAGTTCTC 57.327 47.619 0.00 0.00 0.00 2.87
3995 4588 4.324267 CATTTCAACCCCGTTCTAGTTCT 58.676 43.478 0.00 0.00 0.00 3.01
3996 4589 3.119955 GCATTTCAACCCCGTTCTAGTTC 60.120 47.826 0.00 0.00 0.00 3.01
3997 4590 2.817844 GCATTTCAACCCCGTTCTAGTT 59.182 45.455 0.00 0.00 0.00 2.24
3998 4591 2.224670 TGCATTTCAACCCCGTTCTAGT 60.225 45.455 0.00 0.00 0.00 2.57
3999 4592 2.432444 TGCATTTCAACCCCGTTCTAG 58.568 47.619 0.00 0.00 0.00 2.43
4000 4593 2.570415 TGCATTTCAACCCCGTTCTA 57.430 45.000 0.00 0.00 0.00 2.10
4001 4594 1.818674 GATGCATTTCAACCCCGTTCT 59.181 47.619 0.00 0.00 0.00 3.01
4002 4595 1.135112 GGATGCATTTCAACCCCGTTC 60.135 52.381 0.00 0.00 31.94 3.95
4003 4596 0.894835 GGATGCATTTCAACCCCGTT 59.105 50.000 0.00 0.00 31.94 4.44
4004 4597 0.039618 AGGATGCATTTCAACCCCGT 59.960 50.000 0.00 0.00 38.31 5.28
4005 4598 2.051334 TAGGATGCATTTCAACCCCG 57.949 50.000 0.00 0.00 38.31 5.73
4006 4599 5.539955 ACATAATAGGATGCATTTCAACCCC 59.460 40.000 0.00 0.00 38.31 4.95
4007 4600 6.449698 CACATAATAGGATGCATTTCAACCC 58.550 40.000 0.00 0.00 38.31 4.11
4008 4601 5.922544 GCACATAATAGGATGCATTTCAACC 59.077 40.000 0.00 0.00 38.00 3.77
4009 4602 6.506147 TGCACATAATAGGATGCATTTCAAC 58.494 36.000 0.00 0.00 42.92 3.18
4010 4603 6.712179 TGCACATAATAGGATGCATTTCAA 57.288 33.333 0.00 0.00 42.92 2.69
4017 4610 4.763793 ACAAGGATGCACATAATAGGATGC 59.236 41.667 0.00 0.00 38.59 3.91
4018 4611 7.984422 TTACAAGGATGCACATAATAGGATG 57.016 36.000 0.00 0.00 0.00 3.51
4019 4612 7.998383 TGTTTACAAGGATGCACATAATAGGAT 59.002 33.333 0.00 0.00 0.00 3.24
4020 4613 7.342581 TGTTTACAAGGATGCACATAATAGGA 58.657 34.615 0.00 0.00 0.00 2.94
4021 4614 7.498900 TCTGTTTACAAGGATGCACATAATAGG 59.501 37.037 0.00 0.00 0.00 2.57
4022 4615 8.338259 GTCTGTTTACAAGGATGCACATAATAG 58.662 37.037 0.00 0.00 0.00 1.73
4023 4616 7.282224 GGTCTGTTTACAAGGATGCACATAATA 59.718 37.037 0.00 0.00 0.00 0.98
4024 4617 6.095440 GGTCTGTTTACAAGGATGCACATAAT 59.905 38.462 0.00 0.00 0.00 1.28
4025 4618 5.414454 GGTCTGTTTACAAGGATGCACATAA 59.586 40.000 0.00 0.00 0.00 1.90
4026 4619 4.941263 GGTCTGTTTACAAGGATGCACATA 59.059 41.667 0.00 0.00 0.00 2.29
4027 4620 3.758554 GGTCTGTTTACAAGGATGCACAT 59.241 43.478 0.00 0.00 0.00 3.21
4028 4621 3.146066 GGTCTGTTTACAAGGATGCACA 58.854 45.455 0.00 0.00 0.00 4.57
4029 4622 2.488153 GGGTCTGTTTACAAGGATGCAC 59.512 50.000 0.00 0.00 0.00 4.57
4030 4623 2.790433 GGGTCTGTTTACAAGGATGCA 58.210 47.619 0.00 0.00 0.00 3.96
4031 4624 1.737793 CGGGTCTGTTTACAAGGATGC 59.262 52.381 0.00 0.00 0.00 3.91
4032 4625 1.737793 GCGGGTCTGTTTACAAGGATG 59.262 52.381 0.00 0.00 0.00 3.51
4033 4626 1.349688 TGCGGGTCTGTTTACAAGGAT 59.650 47.619 0.00 0.00 0.00 3.24
4034 4627 0.759959 TGCGGGTCTGTTTACAAGGA 59.240 50.000 0.00 0.00 0.00 3.36
4035 4628 1.821216 ATGCGGGTCTGTTTACAAGG 58.179 50.000 0.00 0.00 0.00 3.61
4036 4629 5.113383 TGTATATGCGGGTCTGTTTACAAG 58.887 41.667 0.00 0.00 0.00 3.16
4037 4630 5.087391 TGTATATGCGGGTCTGTTTACAA 57.913 39.130 0.00 0.00 0.00 2.41
4038 4631 4.739587 TGTATATGCGGGTCTGTTTACA 57.260 40.909 0.00 0.00 0.00 2.41
4039 4632 5.054477 ACATGTATATGCGGGTCTGTTTAC 58.946 41.667 0.00 0.00 37.85 2.01
4040 4633 5.163395 TGACATGTATATGCGGGTCTGTTTA 60.163 40.000 0.00 0.00 37.85 2.01
4041 4634 4.127171 GACATGTATATGCGGGTCTGTTT 58.873 43.478 0.00 0.00 37.85 2.83
4042 4635 3.133901 TGACATGTATATGCGGGTCTGTT 59.866 43.478 0.00 0.00 37.85 3.16
4043 4636 2.698274 TGACATGTATATGCGGGTCTGT 59.302 45.455 0.00 1.19 37.85 3.41
4044 4637 3.243873 ACTGACATGTATATGCGGGTCTG 60.244 47.826 0.00 14.76 37.85 3.51
4045 4638 2.965831 ACTGACATGTATATGCGGGTCT 59.034 45.455 0.00 0.00 37.85 3.85
4046 4639 3.005897 AGACTGACATGTATATGCGGGTC 59.994 47.826 0.00 5.52 37.85 4.46
4047 4640 2.965831 AGACTGACATGTATATGCGGGT 59.034 45.455 0.00 0.00 37.85 5.28
4048 4641 3.243873 ACAGACTGACATGTATATGCGGG 60.244 47.826 10.08 0.00 37.85 6.13
4049 4642 3.982475 ACAGACTGACATGTATATGCGG 58.018 45.455 10.08 0.00 37.85 5.69
4050 4643 4.318333 GCAACAGACTGACATGTATATGCG 60.318 45.833 10.08 0.00 37.85 4.73
4051 4644 4.571984 TGCAACAGACTGACATGTATATGC 59.428 41.667 10.08 2.36 37.85 3.14
4052 4645 6.293244 CCATGCAACAGACTGACATGTATATG 60.293 42.308 23.49 16.62 37.10 1.78
4053 4646 5.761726 CCATGCAACAGACTGACATGTATAT 59.238 40.000 23.49 10.13 37.10 0.86
4054 4647 5.118286 CCATGCAACAGACTGACATGTATA 58.882 41.667 23.49 0.00 37.10 1.47
4055 4648 3.943381 CCATGCAACAGACTGACATGTAT 59.057 43.478 23.49 15.57 37.10 2.29
4056 4649 3.337358 CCATGCAACAGACTGACATGTA 58.663 45.455 23.49 14.47 37.10 2.29
4057 4650 2.156917 CCATGCAACAGACTGACATGT 58.843 47.619 23.49 0.00 37.10 3.21
4058 4651 1.135489 GCCATGCAACAGACTGACATG 60.135 52.381 20.92 20.92 38.24 3.21
4059 4652 1.171308 GCCATGCAACAGACTGACAT 58.829 50.000 10.08 6.98 0.00 3.06
4060 4653 0.109153 AGCCATGCAACAGACTGACA 59.891 50.000 10.08 4.79 0.00 3.58
4061 4654 1.198637 GAAGCCATGCAACAGACTGAC 59.801 52.381 10.08 0.00 0.00 3.51
4062 4655 1.072806 AGAAGCCATGCAACAGACTGA 59.927 47.619 10.08 0.00 0.00 3.41
4063 4656 1.531423 AGAAGCCATGCAACAGACTG 58.469 50.000 0.00 0.00 0.00 3.51
4064 4657 2.038952 TGTAGAAGCCATGCAACAGACT 59.961 45.455 0.00 0.00 0.00 3.24
4065 4658 2.160417 GTGTAGAAGCCATGCAACAGAC 59.840 50.000 0.00 0.00 0.00 3.51
4066 4659 2.038952 AGTGTAGAAGCCATGCAACAGA 59.961 45.455 0.00 0.00 0.00 3.41
4067 4660 2.430465 AGTGTAGAAGCCATGCAACAG 58.570 47.619 0.00 0.00 0.00 3.16
4068 4661 2.566833 AGTGTAGAAGCCATGCAACA 57.433 45.000 0.00 0.00 0.00 3.33
4069 4662 5.567138 AAATAGTGTAGAAGCCATGCAAC 57.433 39.130 0.00 0.00 0.00 4.17
4070 4663 6.434028 AGAAAAATAGTGTAGAAGCCATGCAA 59.566 34.615 0.00 0.00 0.00 4.08
4071 4664 5.945784 AGAAAAATAGTGTAGAAGCCATGCA 59.054 36.000 0.00 0.00 0.00 3.96
4072 4665 6.442513 AGAAAAATAGTGTAGAAGCCATGC 57.557 37.500 0.00 0.00 0.00 4.06
4073 4666 7.693951 CGAAAGAAAAATAGTGTAGAAGCCATG 59.306 37.037 0.00 0.00 0.00 3.66
4074 4667 7.606456 TCGAAAGAAAAATAGTGTAGAAGCCAT 59.394 33.333 0.00 0.00 37.03 4.40
4075 4668 6.932400 TCGAAAGAAAAATAGTGTAGAAGCCA 59.068 34.615 0.00 0.00 37.03 4.75
4076 4669 7.117956 ACTCGAAAGAAAAATAGTGTAGAAGCC 59.882 37.037 0.00 0.00 41.32 4.35
4077 4670 7.952637 CACTCGAAAGAAAAATAGTGTAGAAGC 59.047 37.037 0.00 0.00 41.32 3.86
4078 4671 8.979574 ACACTCGAAAGAAAAATAGTGTAGAAG 58.020 33.333 4.23 0.00 39.33 2.85
4079 4672 8.882415 ACACTCGAAAGAAAAATAGTGTAGAA 57.118 30.769 4.23 0.00 39.33 2.10
4080 4673 8.882415 AACACTCGAAAGAAAAATAGTGTAGA 57.118 30.769 6.37 0.00 39.93 2.59
4081 4674 8.979574 AGAACACTCGAAAGAAAAATAGTGTAG 58.020 33.333 6.37 0.00 39.93 2.74
4082 4675 8.882415 AGAACACTCGAAAGAAAAATAGTGTA 57.118 30.769 6.37 0.00 39.93 2.90
4083 4676 7.787725 AGAACACTCGAAAGAAAAATAGTGT 57.212 32.000 0.00 0.00 41.75 3.55
4088 4681 9.678941 GGAAAATAGAACACTCGAAAGAAAAAT 57.321 29.630 0.00 0.00 41.32 1.82
4089 4682 8.679100 TGGAAAATAGAACACTCGAAAGAAAAA 58.321 29.630 0.00 0.00 41.32 1.94
4090 4683 8.126700 GTGGAAAATAGAACACTCGAAAGAAAA 58.873 33.333 0.00 0.00 41.32 2.29
4091 4684 7.497909 AGTGGAAAATAGAACACTCGAAAGAAA 59.502 33.333 0.00 0.00 39.84 2.52
4092 4685 6.990349 AGTGGAAAATAGAACACTCGAAAGAA 59.010 34.615 0.00 0.00 39.84 2.52
4093 4686 6.522054 AGTGGAAAATAGAACACTCGAAAGA 58.478 36.000 0.00 0.00 39.84 2.52
4094 4687 6.787085 AGTGGAAAATAGAACACTCGAAAG 57.213 37.500 0.00 0.00 39.84 2.62
4095 4688 7.439381 ACTAGTGGAAAATAGAACACTCGAAA 58.561 34.615 0.00 0.00 42.66 3.46
4096 4689 6.989659 ACTAGTGGAAAATAGAACACTCGAA 58.010 36.000 0.00 0.00 42.66 3.71
4097 4690 6.585695 ACTAGTGGAAAATAGAACACTCGA 57.414 37.500 0.00 0.00 42.66 4.04
4098 4691 7.653767 AAACTAGTGGAAAATAGAACACTCG 57.346 36.000 0.00 0.00 42.66 4.18
4121 4714 6.497259 TCTCTGGAGTAGAAGGCTAAGAAAAA 59.503 38.462 0.00 0.00 34.32 1.94
4122 4715 6.017192 TCTCTGGAGTAGAAGGCTAAGAAAA 58.983 40.000 0.00 0.00 34.32 2.29
4123 4716 5.580998 TCTCTGGAGTAGAAGGCTAAGAAA 58.419 41.667 0.00 0.00 34.32 2.52
4124 4717 5.194473 TCTCTGGAGTAGAAGGCTAAGAA 57.806 43.478 0.00 0.00 34.32 2.52
4125 4718 4.864483 TCTCTGGAGTAGAAGGCTAAGA 57.136 45.455 0.00 0.00 34.32 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.