Multiple sequence alignment - TraesCS3D01G303300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G303300 chr3D 100.000 7022 0 0 1 7022 418229850 418236871 0.000000e+00 12968.0
1 TraesCS3D01G303300 chr3D 84.571 700 61 13 1 655 3264208 3264905 0.000000e+00 651.0
2 TraesCS3D01G303300 chr3A 90.580 3503 146 64 1 3434 532852777 532849390 0.000000e+00 4471.0
3 TraesCS3D01G303300 chr3A 94.084 1758 67 20 3425 5176 532848973 532847247 0.000000e+00 2636.0
4 TraesCS3D01G303300 chr3A 95.088 794 31 5 5239 6028 532847243 532846454 0.000000e+00 1243.0
5 TraesCS3D01G303300 chr3A 83.386 638 39 37 6403 7022 532846302 532845714 4.820000e-146 529.0
6 TraesCS3D01G303300 chr3A 84.120 233 15 11 6169 6400 581405123 581404912 9.230000e-49 206.0
7 TraesCS3D01G303300 chr3A 84.862 218 12 7 6184 6400 27719806 27719609 4.300000e-47 200.0
8 TraesCS3D01G303300 chr3B 94.710 2382 69 23 2811 5176 544553782 544556122 0.000000e+00 3648.0
9 TraesCS3D01G303300 chr3B 92.229 1364 37 17 1492 2812 544552287 544553624 0.000000e+00 1868.0
10 TraesCS3D01G303300 chr3B 95.375 800 32 3 5239 6038 544556126 544556920 0.000000e+00 1267.0
11 TraesCS3D01G303300 chr3B 85.658 767 47 37 735 1484 544551133 544551853 0.000000e+00 749.0
12 TraesCS3D01G303300 chr3B 86.846 669 74 8 1 655 441080643 441081311 0.000000e+00 736.0
13 TraesCS3D01G303300 chr3B 86.787 666 64 9 1 645 801405176 801405838 0.000000e+00 721.0
14 TraesCS3D01G303300 chr3B 86.013 622 22 10 6399 7012 544557086 544557650 2.170000e-169 606.0
15 TraesCS3D01G303300 chr3B 92.254 142 7 3 6037 6177 544556960 544557098 1.540000e-46 198.0
16 TraesCS3D01G303300 chr3B 84.475 219 11 8 6181 6398 31258985 31258789 2.000000e-45 195.0
17 TraesCS3D01G303300 chr1A 87.556 667 71 5 1 655 414349465 414350131 0.000000e+00 761.0
18 TraesCS3D01G303300 chr1A 76.068 234 36 11 6180 6398 578548348 578548576 3.460000e-18 104.0
19 TraesCS3D01G303300 chr1A 96.667 60 2 0 6181 6240 48835182 48835123 4.480000e-17 100.0
20 TraesCS3D01G303300 chr6A 87.191 687 54 9 1 654 486923771 486923086 0.000000e+00 750.0
21 TraesCS3D01G303300 chr6A 84.448 688 71 10 1 655 112654529 112655213 0.000000e+00 645.0
22 TraesCS3D01G303300 chr6A 84.522 659 66 15 1 645 287098297 287098933 2.780000e-173 619.0
23 TraesCS3D01G303300 chr6A 86.230 305 31 6 361 655 112679305 112679608 3.160000e-83 320.0
24 TraesCS3D01G303300 chr6A 85.321 218 8 8 6182 6398 446737418 446737224 3.320000e-48 204.0
25 TraesCS3D01G303300 chr6A 83.710 221 13 9 6181 6400 5223339 5223141 3.340000e-43 187.0
26 TraesCS3D01G303300 chr7B 87.538 658 69 4 1 645 447999986 448000643 0.000000e+00 749.0
27 TraesCS3D01G303300 chr7B 88.128 219 18 3 6180 6398 15268431 15268221 3.250000e-63 254.0
28 TraesCS3D01G303300 chr2A 87.367 657 67 5 1 645 297157135 297157787 0.000000e+00 739.0
29 TraesCS3D01G303300 chr2A 85.714 686 66 12 1 656 107940295 107940978 0.000000e+00 695.0
30 TraesCS3D01G303300 chr2A 85.387 698 67 16 1 665 424693820 424693125 0.000000e+00 691.0
31 TraesCS3D01G303300 chr2A 86.364 220 9 9 6182 6400 195783449 195783648 3.300000e-53 220.0
32 TraesCS3D01G303300 chr7A 87.736 636 61 12 1 623 192071314 192071945 0.000000e+00 726.0
33 TraesCS3D01G303300 chr7A 84.429 700 64 16 1 655 374088574 374089273 0.000000e+00 647.0
34 TraesCS3D01G303300 chr7A 84.143 700 66 16 1 655 374040396 374041095 2.760000e-178 636.0
35 TraesCS3D01G303300 chr7A 86.036 222 10 7 6180 6400 581150544 581150343 1.190000e-52 219.0
36 TraesCS3D01G303300 chr7A 81.019 216 17 2 6184 6398 676387474 676387666 4.390000e-32 150.0
37 TraesCS3D01G303300 chr7D 86.172 687 59 15 1 656 19285216 19285897 0.000000e+00 710.0
38 TraesCS3D01G303300 chr7D 85.455 220 9 9 6180 6398 617030151 617030348 2.570000e-49 207.0
39 TraesCS3D01G303300 chr7D 84.793 217 8 9 6183 6398 33745634 33745442 2.000000e-45 195.0
40 TraesCS3D01G303300 chr7D 82.648 219 13 12 6180 6398 556709317 556709510 3.370000e-38 171.0
41 TraesCS3D01G303300 chr5A 84.627 683 72 15 1 655 131015798 131015121 0.000000e+00 649.0
42 TraesCS3D01G303300 chr5D 95.853 217 9 0 6182 6398 559224872 559224656 1.120000e-92 351.0
43 TraesCS3D01G303300 chr4D 84.091 220 10 11 6180 6398 53737274 53737079 9.300000e-44 189.0
44 TraesCS3D01G303300 chr4D 76.496 234 36 13 6180 6398 502569972 502570201 7.450000e-20 110.0
45 TraesCS3D01G303300 chr2D 83.871 217 11 8 6183 6398 15746264 15746071 1.200000e-42 185.0
46 TraesCS3D01G303300 chr5B 91.818 110 9 0 6289 6398 491617939 491618048 3.390000e-33 154.0
47 TraesCS3D01G303300 chr4B 81.193 218 17 6 6182 6398 119820916 119820722 3.390000e-33 154.0
48 TraesCS3D01G303300 chr4B 77.824 239 30 17 6177 6398 106489496 106489728 7.390000e-25 126.0
49 TraesCS3D01G303300 chr4B 96.721 61 2 0 6180 6240 618565503 618565563 1.250000e-17 102.0
50 TraesCS3D01G303300 chr1D 84.138 145 21 2 2821 2965 364494919 364495061 9.500000e-29 139.0
51 TraesCS3D01G303300 chr1D 76.923 247 27 20 6179 6397 443784269 443784513 5.760000e-21 113.0
52 TraesCS3D01G303300 chr1D 76.623 231 37 12 6182 6398 378313492 378313719 2.070000e-20 111.0
53 TraesCS3D01G303300 chr1D 93.220 59 4 0 6182 6240 427861771 427861829 3.490000e-13 87.9
54 TraesCS3D01G303300 chr1D 91.228 57 4 1 6185 6240 449211661 449211717 7.550000e-10 76.8
55 TraesCS3D01G303300 chrUn 77.542 236 33 13 6179 6398 30082695 30082464 2.660000e-24 124.0
56 TraesCS3D01G303300 chrUn 77.586 232 34 11 6182 6398 93236453 93236681 2.660000e-24 124.0
57 TraesCS3D01G303300 chrUn 76.522 230 31 15 6185 6392 268785984 268786212 3.460000e-18 104.0
58 TraesCS3D01G303300 chrUn 94.828 58 3 0 6183 6240 8798102 8798159 2.700000e-14 91.6
59 TraesCS3D01G303300 chr1B 88.889 99 10 1 6304 6402 32195255 32195352 3.440000e-23 121.0
60 TraesCS3D01G303300 chr1B 96.825 63 2 0 6178 6240 24997496 24997434 9.630000e-19 106.0
61 TraesCS3D01G303300 chr1B 95.161 62 3 0 6179 6240 151453689 151453750 1.610000e-16 99.0
62 TraesCS3D01G303300 chr6B 93.939 66 3 1 6175 6240 46663163 46663227 1.610000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G303300 chr3D 418229850 418236871 7021 False 12968.000000 12968 100.000000 1 7022 1 chr3D.!!$F2 7021
1 TraesCS3D01G303300 chr3D 3264208 3264905 697 False 651.000000 651 84.571000 1 655 1 chr3D.!!$F1 654
2 TraesCS3D01G303300 chr3A 532845714 532852777 7063 True 2219.750000 4471 90.784500 1 7022 4 chr3A.!!$R3 7021
3 TraesCS3D01G303300 chr3B 544551133 544557650 6517 False 1389.333333 3648 91.039833 735 7012 6 chr3B.!!$F3 6277
4 TraesCS3D01G303300 chr3B 441080643 441081311 668 False 736.000000 736 86.846000 1 655 1 chr3B.!!$F1 654
5 TraesCS3D01G303300 chr3B 801405176 801405838 662 False 721.000000 721 86.787000 1 645 1 chr3B.!!$F2 644
6 TraesCS3D01G303300 chr1A 414349465 414350131 666 False 761.000000 761 87.556000 1 655 1 chr1A.!!$F1 654
7 TraesCS3D01G303300 chr6A 486923086 486923771 685 True 750.000000 750 87.191000 1 654 1 chr6A.!!$R3 653
8 TraesCS3D01G303300 chr6A 112654529 112655213 684 False 645.000000 645 84.448000 1 655 1 chr6A.!!$F1 654
9 TraesCS3D01G303300 chr6A 287098297 287098933 636 False 619.000000 619 84.522000 1 645 1 chr6A.!!$F3 644
10 TraesCS3D01G303300 chr7B 447999986 448000643 657 False 749.000000 749 87.538000 1 645 1 chr7B.!!$F1 644
11 TraesCS3D01G303300 chr2A 297157135 297157787 652 False 739.000000 739 87.367000 1 645 1 chr2A.!!$F3 644
12 TraesCS3D01G303300 chr2A 107940295 107940978 683 False 695.000000 695 85.714000 1 656 1 chr2A.!!$F1 655
13 TraesCS3D01G303300 chr2A 424693125 424693820 695 True 691.000000 691 85.387000 1 665 1 chr2A.!!$R1 664
14 TraesCS3D01G303300 chr7A 192071314 192071945 631 False 726.000000 726 87.736000 1 623 1 chr7A.!!$F1 622
15 TraesCS3D01G303300 chr7A 374088574 374089273 699 False 647.000000 647 84.429000 1 655 1 chr7A.!!$F3 654
16 TraesCS3D01G303300 chr7A 374040396 374041095 699 False 636.000000 636 84.143000 1 655 1 chr7A.!!$F2 654
17 TraesCS3D01G303300 chr7D 19285216 19285897 681 False 710.000000 710 86.172000 1 656 1 chr7D.!!$F1 655
18 TraesCS3D01G303300 chr5A 131015121 131015798 677 True 649.000000 649 84.627000 1 655 1 chr5A.!!$R1 654

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
83 90 1.973812 GACAGTCTTTGCCTGCCCC 60.974 63.158 0.00 0.0 33.09 5.80 F
1159 1259 0.044855 AGGTACCAATGCCTCCTCCT 59.955 55.000 15.94 0.0 35.76 3.69 F
1160 1260 0.470341 GGTACCAATGCCTCCTCCTC 59.530 60.000 7.15 0.0 0.00 3.71 F
1700 2243 0.674895 GAGCTGGCGGTTTGAGTGAT 60.675 55.000 0.00 0.0 0.00 3.06 F
1722 2265 0.961753 CACAAAAGGTTGCCCCTCTC 59.038 55.000 0.00 0.0 45.47 3.20 F
1865 2437 1.154225 GTGCCACACGCTGTTATGC 60.154 57.895 0.00 0.0 38.78 3.14 F
3537 4726 0.813610 TTTGCACTCACTCACCCACG 60.814 55.000 0.00 0.0 0.00 4.94 F
5131 6329 0.472471 TGTTCCTGTTTCCGCTTCCT 59.528 50.000 0.00 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1902 2474 0.039618 AAATTCAGGTGGGGCGACAT 59.960 50.000 0.00 0.0 0.0 3.06 R
2228 2814 1.303309 GAATCCGGCCACATGAAGAG 58.697 55.000 2.24 0.0 0.0 2.85 R
3123 3884 2.159435 GCTAAACCGTAACATGCTTGGG 60.159 50.000 4.44 0.0 0.0 4.12 R
3510 4699 3.630312 GTGAGTGAGTGCAAAGGGTTTTA 59.370 43.478 0.00 0.0 0.0 1.52 R
3537 4726 6.116126 ACAAGAGAAAATCATAGGTGGTAGC 58.884 40.000 0.00 0.0 0.0 3.58 R
3826 5015 2.877335 AGGTAAAAGATCGTCGTGAGC 58.123 47.619 0.00 0.0 0.0 4.26 R
5202 6400 0.036010 GCAGAAGGGCTTGCTGAGTA 60.036 55.000 9.13 0.0 0.0 2.59 R
6538 7787 0.036164 ACACACACACACACACCTGT 59.964 50.000 0.00 0.0 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 85 2.373169 TCCATGAAGACAGTCTTTGCCT 59.627 45.455 17.19 0.00 36.73 4.75
83 90 1.973812 GACAGTCTTTGCCTGCCCC 60.974 63.158 0.00 0.00 33.09 5.80
118 128 7.417342 CCACGGGTGAAAAATTATATCCATGTT 60.417 37.037 0.00 0.00 0.00 2.71
135 162 4.584325 CCATGTTCAAACCCGATGGATATT 59.416 41.667 5.27 0.00 33.91 1.28
262 321 8.141298 TCAACATCCACTAACAACCTAAGATA 57.859 34.615 0.00 0.00 0.00 1.98
263 322 8.768397 TCAACATCCACTAACAACCTAAGATAT 58.232 33.333 0.00 0.00 0.00 1.63
337 402 7.806680 AAAAATAAGGAAAGGGGCATTAGAA 57.193 32.000 0.00 0.00 0.00 2.10
384 452 8.746922 TGTCAACTAATAAAAGTTACGACGAT 57.253 30.769 0.00 0.00 37.61 3.73
495 578 3.569701 GTCATACTATCGGGTCGGGTTTA 59.430 47.826 0.00 0.00 0.00 2.01
534 617 5.023452 ACACGATTATATCCATGCCCTAGA 58.977 41.667 0.00 0.00 0.00 2.43
646 733 4.219264 CATGCCCATGGGTAAAATTGTT 57.781 40.909 31.58 7.91 37.65 2.83
649 736 5.350504 TGCCCATGGGTAAAATTGTTATG 57.649 39.130 31.58 1.40 37.65 1.90
658 745 6.040247 GGGTAAAATTGTTATGCTTAGGTGC 58.960 40.000 0.00 0.00 0.00 5.01
798 888 5.682943 TCACAGGTCATTTTTAGTTTCCG 57.317 39.130 0.00 0.00 0.00 4.30
898 991 6.070194 TCAGTTCGAAATTATTTCTCTCCCCT 60.070 38.462 14.66 1.27 37.52 4.79
953 1052 4.447138 TTGGCCATTTATAATCCCGTCT 57.553 40.909 6.09 0.00 0.00 4.18
954 1053 3.750371 TGGCCATTTATAATCCCGTCTG 58.250 45.455 0.00 0.00 0.00 3.51
955 1054 3.392947 TGGCCATTTATAATCCCGTCTGA 59.607 43.478 0.00 0.00 0.00 3.27
956 1055 3.751698 GGCCATTTATAATCCCGTCTGAC 59.248 47.826 0.00 0.00 0.00 3.51
973 1072 3.610669 CGGCCATCTCCCTCTCGG 61.611 72.222 2.24 0.00 0.00 4.63
1158 1258 0.919710 AAGGTACCAATGCCTCCTCC 59.080 55.000 15.94 0.00 40.66 4.30
1159 1259 0.044855 AGGTACCAATGCCTCCTCCT 59.955 55.000 15.94 0.00 35.76 3.69
1160 1260 0.470341 GGTACCAATGCCTCCTCCTC 59.530 60.000 7.15 0.00 0.00 3.71
1161 1261 0.470341 GTACCAATGCCTCCTCCTCC 59.530 60.000 0.00 0.00 0.00 4.30
1162 1262 0.694444 TACCAATGCCTCCTCCTCCC 60.694 60.000 0.00 0.00 0.00 4.30
1163 1263 1.695597 CCAATGCCTCCTCCTCCCT 60.696 63.158 0.00 0.00 0.00 4.20
1164 1264 1.704007 CCAATGCCTCCTCCTCCCTC 61.704 65.000 0.00 0.00 0.00 4.30
1167 1267 2.445654 GCCTCCTCCTCCCTCCTG 60.446 72.222 0.00 0.00 0.00 3.86
1172 1272 2.695597 CTCCTCCCTCCTGCTCCT 59.304 66.667 0.00 0.00 0.00 3.69
1198 1298 3.997064 CTCCCGCCTGCTCTGTTCG 62.997 68.421 0.00 0.00 0.00 3.95
1203 1303 2.811317 CCTGCTCTGTTCGTCCGC 60.811 66.667 0.00 0.00 0.00 5.54
1270 1371 2.558821 CGCCGCAAAAATCGTGGA 59.441 55.556 0.00 0.00 36.02 4.02
1350 1451 2.777972 TTCGGGATACGGCGAGGTG 61.778 63.158 16.62 0.00 44.45 4.00
1351 1452 4.280494 CGGGATACGGCGAGGTGG 62.280 72.222 16.62 0.00 39.42 4.61
1352 1453 4.603946 GGGATACGGCGAGGTGGC 62.604 72.222 16.62 0.00 40.44 5.01
1405 1518 2.029964 TTCGTCGGTGGGCTTGAC 59.970 61.111 0.00 0.00 0.00 3.18
1700 2243 0.674895 GAGCTGGCGGTTTGAGTGAT 60.675 55.000 0.00 0.00 0.00 3.06
1704 2247 1.971167 GGCGGTTTGAGTGATGCCA 60.971 57.895 0.00 0.00 42.03 4.92
1722 2265 0.961753 CACAAAAGGTTGCCCCTCTC 59.038 55.000 0.00 0.00 45.47 3.20
1825 2397 5.654603 TCTTCGAGTACTATTTTCCTGCA 57.345 39.130 0.00 0.00 0.00 4.41
1865 2437 1.154225 GTGCCACACGCTGTTATGC 60.154 57.895 0.00 0.00 38.78 3.14
1880 2452 3.179048 GTTATGCGCTGTTTTGGATTCC 58.821 45.455 9.73 0.00 0.00 3.01
1896 2468 8.463930 TTTGGATTCCATACATTCTCCAATAC 57.536 34.615 6.15 0.00 41.13 1.89
1900 2472 8.375506 GGATTCCATACATTCTCCAATACAGTA 58.624 37.037 0.00 0.00 0.00 2.74
1901 2473 9.209175 GATTCCATACATTCTCCAATACAGTAC 57.791 37.037 0.00 0.00 0.00 2.73
1902 2474 7.669089 TCCATACATTCTCCAATACAGTACA 57.331 36.000 0.00 0.00 0.00 2.90
1903 2475 8.262601 TCCATACATTCTCCAATACAGTACAT 57.737 34.615 0.00 0.00 0.00 2.29
1904 2476 8.150296 TCCATACATTCTCCAATACAGTACATG 58.850 37.037 0.00 0.00 0.00 3.21
1905 2477 7.933577 CCATACATTCTCCAATACAGTACATGT 59.066 37.037 2.69 2.69 46.45 3.21
1906 2478 8.982685 CATACATTCTCCAATACAGTACATGTC 58.017 37.037 0.00 0.00 42.70 3.06
1907 2479 6.042777 ACATTCTCCAATACAGTACATGTCG 58.957 40.000 0.00 0.00 42.70 4.35
1908 2480 4.041740 TCTCCAATACAGTACATGTCGC 57.958 45.455 0.00 0.00 42.70 5.19
1909 2481 3.123804 CTCCAATACAGTACATGTCGCC 58.876 50.000 0.00 0.00 42.70 5.54
1910 2482 2.159014 TCCAATACAGTACATGTCGCCC 60.159 50.000 0.00 0.00 42.70 6.13
1911 2483 2.210116 CAATACAGTACATGTCGCCCC 58.790 52.381 0.00 0.00 42.70 5.80
2182 2768 3.340814 AAGTGACACATGACAGGGATC 57.659 47.619 8.59 0.00 0.00 3.36
2228 2814 3.721035 GCATTTTAAGACATGGATGGCC 58.279 45.455 0.00 0.00 36.08 5.36
2345 2931 6.891908 ACTGTTTAGCAATGACCCATATCTTT 59.108 34.615 0.00 0.00 0.00 2.52
2447 3036 7.334421 TCTCTATTGCTCAAAATGTACCTTGTC 59.666 37.037 0.00 0.00 0.00 3.18
3123 3884 9.490663 CGGATACTCAATACAAGATTTTCAAAC 57.509 33.333 0.00 0.00 0.00 2.93
3219 3981 2.917713 TTGGCTACCATGGGAAACAT 57.082 45.000 18.09 0.00 41.57 2.71
3223 3985 3.525609 TGGCTACCATGGGAAACATAAGA 59.474 43.478 18.09 0.00 37.84 2.10
3342 4105 2.612212 CCCTTTGTGTGTGTCTGTGTAC 59.388 50.000 0.00 0.00 0.00 2.90
3343 4106 3.266636 CCTTTGTGTGTGTCTGTGTACA 58.733 45.455 0.00 0.00 0.00 2.90
3398 4161 5.665812 TCTGTATCCTTTAGGCAATAGTGGT 59.334 40.000 0.00 0.00 34.44 4.16
3399 4162 6.842280 TCTGTATCCTTTAGGCAATAGTGGTA 59.158 38.462 0.00 0.00 34.44 3.25
3400 4163 6.823497 TGTATCCTTTAGGCAATAGTGGTAC 58.177 40.000 0.00 0.00 34.44 3.34
3438 4627 9.396022 AGTAAGTTATTAACTATGCTGCAATGT 57.604 29.630 6.36 5.71 41.91 2.71
3508 4697 6.268566 AGCATTGTTTTCAGAGTTTGACTTC 58.731 36.000 0.00 0.00 34.94 3.01
3510 4699 6.753744 GCATTGTTTTCAGAGTTTGACTTCTT 59.246 34.615 0.00 0.00 34.94 2.52
3537 4726 0.813610 TTTGCACTCACTCACCCACG 60.814 55.000 0.00 0.00 0.00 4.94
3826 5015 5.237996 CACCCTGTGCTTATTGACATATCTG 59.762 44.000 0.00 0.00 0.00 2.90
4088 5281 7.396540 AATTTCATTTGTCCAGGTATCTGTC 57.603 36.000 1.52 0.00 39.31 3.51
4208 5401 4.711721 CATCCTTGACACACGTGTTAATG 58.288 43.478 20.79 10.59 45.05 1.90
4247 5440 7.908827 TCAATTATCATTGCTGCATTTTTGT 57.091 28.000 1.84 0.00 39.90 2.83
4248 5441 8.999220 TCAATTATCATTGCTGCATTTTTGTA 57.001 26.923 1.84 0.00 39.90 2.41
4249 5442 9.602568 TCAATTATCATTGCTGCATTTTTGTAT 57.397 25.926 1.84 0.00 39.90 2.29
4250 5443 9.644993 CAATTATCATTGCTGCATTTTTGTATG 57.355 29.630 1.84 2.32 33.57 2.39
4251 5444 8.951787 ATTATCATTGCTGCATTTTTGTATGT 57.048 26.923 1.84 0.00 0.00 2.29
4254 5447 8.951787 ATCATTGCTGCATTTTTGTATGTATT 57.048 26.923 1.84 0.00 0.00 1.89
4281 5474 6.755206 TCTATTATTCACTATGGGTTGACCG 58.245 40.000 0.00 0.00 44.64 4.79
4372 5565 6.542370 GCCAGTTGTATACATACATGGTTCTT 59.458 38.462 17.35 0.45 41.85 2.52
4456 5649 7.658525 ATGCACAATATTTCTGGGTCATTAA 57.341 32.000 0.00 0.00 0.00 1.40
4700 5895 5.808540 GTGTGCATACATGAATGAGCATTTT 59.191 36.000 8.93 0.00 39.39 1.82
4885 6080 8.178964 TGTGTTTGTGTTCTTTATAACTCACAC 58.821 33.333 11.05 11.05 35.59 3.82
4903 6098 3.814842 CACACTGGACATTTGCTAACTCA 59.185 43.478 0.00 0.00 0.00 3.41
4997 6194 2.632987 AATGCTATTGTACCCCCGAC 57.367 50.000 0.00 0.00 0.00 4.79
5035 6232 7.547227 AGGCCATGCTGTAATTTTAGTTTAAG 58.453 34.615 5.01 0.00 0.00 1.85
5109 6307 1.177401 GTTTCTTGCTAGGCCCTTGG 58.823 55.000 0.00 0.00 0.00 3.61
5124 6322 1.681264 CCTTGGTGTGTTCCTGTTTCC 59.319 52.381 0.00 0.00 0.00 3.13
5131 6329 0.472471 TGTTCCTGTTTCCGCTTCCT 59.528 50.000 0.00 0.00 0.00 3.36
5135 6333 2.661718 TCCTGTTTCCGCTTCCTTTTT 58.338 42.857 0.00 0.00 0.00 1.94
5176 6374 4.992688 TGCTGTACTTTGGTCTTGTTTTG 58.007 39.130 0.00 0.00 0.00 2.44
5177 6375 4.142271 TGCTGTACTTTGGTCTTGTTTTGG 60.142 41.667 0.00 0.00 0.00 3.28
5179 6377 4.020543 TGTACTTTGGTCTTGTTTTGGCT 58.979 39.130 0.00 0.00 0.00 4.75
5180 6378 4.464597 TGTACTTTGGTCTTGTTTTGGCTT 59.535 37.500 0.00 0.00 0.00 4.35
5181 6379 4.123497 ACTTTGGTCTTGTTTTGGCTTC 57.877 40.909 0.00 0.00 0.00 3.86
5182 6380 3.513515 ACTTTGGTCTTGTTTTGGCTTCA 59.486 39.130 0.00 0.00 0.00 3.02
5183 6381 4.162131 ACTTTGGTCTTGTTTTGGCTTCAT 59.838 37.500 0.00 0.00 0.00 2.57
5184 6382 3.731652 TGGTCTTGTTTTGGCTTCATG 57.268 42.857 0.00 0.00 0.00 3.07
5185 6383 3.030291 TGGTCTTGTTTTGGCTTCATGT 58.970 40.909 0.00 0.00 0.00 3.21
5186 6384 3.068024 TGGTCTTGTTTTGGCTTCATGTC 59.932 43.478 0.00 0.00 0.00 3.06
5187 6385 3.068024 GGTCTTGTTTTGGCTTCATGTCA 59.932 43.478 0.00 0.00 0.00 3.58
5188 6386 4.262164 GGTCTTGTTTTGGCTTCATGTCAT 60.262 41.667 0.00 0.00 0.00 3.06
5189 6387 4.919754 GTCTTGTTTTGGCTTCATGTCATC 59.080 41.667 0.00 0.00 0.00 2.92
5190 6388 3.557577 TGTTTTGGCTTCATGTCATCG 57.442 42.857 0.00 0.00 0.00 3.84
5191 6389 3.145286 TGTTTTGGCTTCATGTCATCGA 58.855 40.909 0.00 0.00 0.00 3.59
5192 6390 3.058293 TGTTTTGGCTTCATGTCATCGAC 60.058 43.478 0.00 0.00 0.00 4.20
5193 6391 1.737838 TTGGCTTCATGTCATCGACC 58.262 50.000 0.00 0.00 0.00 4.79
5194 6392 0.904649 TGGCTTCATGTCATCGACCT 59.095 50.000 0.00 0.00 0.00 3.85
5195 6393 1.293924 GGCTTCATGTCATCGACCTG 58.706 55.000 0.00 0.00 31.22 4.00
5196 6394 1.406069 GGCTTCATGTCATCGACCTGT 60.406 52.381 0.00 0.00 31.77 4.00
5197 6395 2.350522 GCTTCATGTCATCGACCTGTT 58.649 47.619 0.00 0.00 31.77 3.16
5198 6396 2.094894 GCTTCATGTCATCGACCTGTTG 59.905 50.000 0.00 0.00 31.77 3.33
5199 6397 2.385013 TCATGTCATCGACCTGTTGG 57.615 50.000 0.00 0.00 39.83 3.77
5200 6398 0.729116 CATGTCATCGACCTGTTGGC 59.271 55.000 0.00 0.00 36.63 4.52
5201 6399 0.615331 ATGTCATCGACCTGTTGGCT 59.385 50.000 0.00 0.00 36.63 4.75
5202 6400 0.396435 TGTCATCGACCTGTTGGCTT 59.604 50.000 0.00 0.00 36.63 4.35
5203 6401 1.621317 TGTCATCGACCTGTTGGCTTA 59.379 47.619 0.00 0.00 36.63 3.09
5204 6402 2.000447 GTCATCGACCTGTTGGCTTAC 59.000 52.381 0.00 0.00 36.63 2.34
5205 6403 1.899814 TCATCGACCTGTTGGCTTACT 59.100 47.619 0.00 0.00 36.63 2.24
5206 6404 2.094182 TCATCGACCTGTTGGCTTACTC 60.094 50.000 0.00 0.00 36.63 2.59
5207 6405 1.334160 TCGACCTGTTGGCTTACTCA 58.666 50.000 0.00 0.00 36.63 3.41
5208 6406 1.272490 TCGACCTGTTGGCTTACTCAG 59.728 52.381 0.00 0.00 36.63 3.35
5219 6417 2.777832 CTTACTCAGCAAGCCCTTCT 57.222 50.000 0.00 0.00 0.00 2.85
5220 6418 2.354259 CTTACTCAGCAAGCCCTTCTG 58.646 52.381 0.00 0.00 0.00 3.02
5221 6419 0.036010 TACTCAGCAAGCCCTTCTGC 60.036 55.000 0.00 0.00 0.00 4.26
5222 6420 1.002379 CTCAGCAAGCCCTTCTGCT 60.002 57.895 0.00 0.00 45.43 4.24
5223 6421 3.275088 CAGCAAGCCCTTCTGCTG 58.725 61.111 9.43 9.43 46.69 4.41
5224 6422 2.675772 AGCAAGCCCTTCTGCTGC 60.676 61.111 0.00 0.00 41.80 5.25
5225 6423 2.675772 GCAAGCCCTTCTGCTGCT 60.676 61.111 0.00 0.00 41.80 4.24
5226 6424 2.273912 GCAAGCCCTTCTGCTGCTT 61.274 57.895 0.00 0.00 45.69 3.91
5227 6425 4.092343 AAGCCCTTCTGCTGCTTG 57.908 55.556 0.00 0.00 43.30 4.01
5228 6426 1.152368 AAGCCCTTCTGCTGCTTGT 59.848 52.632 0.00 0.00 43.30 3.16
5229 6427 1.177256 AAGCCCTTCTGCTGCTTGTG 61.177 55.000 0.00 0.00 43.30 3.33
5230 6428 1.601759 GCCCTTCTGCTGCTTGTGA 60.602 57.895 0.00 0.00 0.00 3.58
5231 6429 1.174712 GCCCTTCTGCTGCTTGTGAA 61.175 55.000 0.00 0.02 0.00 3.18
5232 6430 0.879765 CCCTTCTGCTGCTTGTGAAG 59.120 55.000 0.00 9.22 36.59 3.02
5233 6431 1.602311 CCTTCTGCTGCTTGTGAAGT 58.398 50.000 16.90 0.00 35.47 3.01
5234 6432 1.534595 CCTTCTGCTGCTTGTGAAGTC 59.465 52.381 16.90 0.00 35.47 3.01
5235 6433 2.492012 CTTCTGCTGCTTGTGAAGTCT 58.508 47.619 0.00 0.00 33.37 3.24
5236 6434 2.160822 TCTGCTGCTTGTGAAGTCTC 57.839 50.000 0.00 0.00 0.00 3.36
5237 6435 1.690893 TCTGCTGCTTGTGAAGTCTCT 59.309 47.619 0.00 0.00 0.00 3.10
5260 6458 9.279904 CTCTACAATTTTCTCTCTAACGTAGTG 57.720 37.037 0.00 0.00 45.00 2.74
5269 6467 6.989659 TCTCTCTAACGTAGTGAACCATTTT 58.010 36.000 0.00 0.00 45.00 1.82
5271 6469 7.597743 TCTCTCTAACGTAGTGAACCATTTTTC 59.402 37.037 0.00 0.00 45.00 2.29
5347 6545 5.977725 ACTTCCACTATGATGACGTAATTCG 59.022 40.000 0.00 0.00 46.00 3.34
5501 6699 6.019559 CACAATACTACTCATCATGAACACGG 60.020 42.308 0.00 0.00 0.00 4.94
5515 6713 3.130516 TGAACACGGTATGGTTTGCAAAA 59.869 39.130 14.67 0.00 0.00 2.44
5591 6789 1.734137 CAGATGCAAGCTCATGGCC 59.266 57.895 0.00 0.00 43.05 5.36
5596 6794 4.809496 CAAGCTCATGGCCGCCCT 62.809 66.667 7.03 0.00 43.05 5.19
5858 7056 4.321304 CCACTGACACTGAGATAGTCGTTT 60.321 45.833 0.00 0.00 37.60 3.60
5915 7113 3.241995 GGCATCTGCTTTTAGTTACGACG 60.242 47.826 1.70 0.00 41.70 5.12
5916 7114 3.611113 GCATCTGCTTTTAGTTACGACGA 59.389 43.478 0.00 0.00 38.21 4.20
5917 7115 4.490479 GCATCTGCTTTTAGTTACGACGAC 60.490 45.833 0.00 0.00 38.21 4.34
5920 7118 4.678287 TCTGCTTTTAGTTACGACGACTTG 59.322 41.667 0.00 0.00 0.00 3.16
5953 7155 2.161609 GTGAAGCCGGTATTGTTCTTGG 59.838 50.000 1.90 0.00 0.00 3.61
6137 7385 2.284824 CAGAAGAGCTGCTCCAGGA 58.715 57.895 25.09 0.00 37.90 3.86
6138 7386 0.831966 CAGAAGAGCTGCTCCAGGAT 59.168 55.000 25.09 4.20 37.90 3.24
6141 7389 3.110705 AGAAGAGCTGCTCCAGGATTTA 58.889 45.455 25.09 0.00 31.21 1.40
6142 7390 2.998316 AGAGCTGCTCCAGGATTTAC 57.002 50.000 25.09 0.00 31.21 2.01
6143 7391 1.137872 AGAGCTGCTCCAGGATTTACG 59.862 52.381 25.09 0.00 31.21 3.18
6144 7392 0.905357 AGCTGCTCCAGGATTTACGT 59.095 50.000 0.00 0.00 31.21 3.57
6148 7396 3.057526 GCTGCTCCAGGATTTACGTTTTT 60.058 43.478 0.00 0.00 31.21 1.94
6167 7415 0.238025 TACGCGTGCAGTTCTTCGTA 59.762 50.000 24.59 0.00 0.00 3.43
6168 7416 0.388134 ACGCGTGCAGTTCTTCGTAT 60.388 50.000 12.93 0.00 0.00 3.06
6169 7417 0.023732 CGCGTGCAGTTCTTCGTATG 59.976 55.000 0.00 0.00 0.00 2.39
6170 7418 0.370273 GCGTGCAGTTCTTCGTATGG 59.630 55.000 0.00 0.00 0.00 2.74
6171 7419 1.710013 CGTGCAGTTCTTCGTATGGT 58.290 50.000 0.00 0.00 0.00 3.55
6172 7420 2.871133 CGTGCAGTTCTTCGTATGGTA 58.129 47.619 0.00 0.00 0.00 3.25
6173 7421 3.247442 CGTGCAGTTCTTCGTATGGTAA 58.753 45.455 0.00 0.00 0.00 2.85
6174 7422 3.676172 CGTGCAGTTCTTCGTATGGTAAA 59.324 43.478 0.00 0.00 0.00 2.01
6175 7423 4.201589 CGTGCAGTTCTTCGTATGGTAAAG 60.202 45.833 0.00 0.00 0.00 1.85
6176 7424 4.927425 GTGCAGTTCTTCGTATGGTAAAGA 59.073 41.667 0.00 0.00 0.00 2.52
6177 7425 5.581085 GTGCAGTTCTTCGTATGGTAAAGAT 59.419 40.000 0.00 0.00 0.00 2.40
6178 7426 6.092259 GTGCAGTTCTTCGTATGGTAAAGATT 59.908 38.462 0.00 0.00 0.00 2.40
6179 7427 6.653320 TGCAGTTCTTCGTATGGTAAAGATTT 59.347 34.615 0.00 0.00 0.00 2.17
6180 7428 7.174253 TGCAGTTCTTCGTATGGTAAAGATTTT 59.826 33.333 0.00 0.00 0.00 1.82
6181 7429 8.021396 GCAGTTCTTCGTATGGTAAAGATTTTT 58.979 33.333 0.00 0.00 0.00 1.94
6201 7449 2.037871 TTTTTCCAACCAGGCTCGC 58.962 52.632 0.00 0.00 37.29 5.03
6202 7450 0.753479 TTTTTCCAACCAGGCTCGCA 60.753 50.000 0.00 0.00 37.29 5.10
6203 7451 1.452145 TTTTCCAACCAGGCTCGCAC 61.452 55.000 0.00 0.00 37.29 5.34
6204 7452 3.842925 TTCCAACCAGGCTCGCACC 62.843 63.158 0.00 0.00 37.29 5.01
6209 7457 4.351054 CCAGGCTCGCACCCCTTT 62.351 66.667 0.00 0.00 0.00 3.11
6210 7458 2.747855 CAGGCTCGCACCCCTTTC 60.748 66.667 0.00 0.00 0.00 2.62
6211 7459 4.035102 AGGCTCGCACCCCTTTCC 62.035 66.667 0.00 0.00 0.00 3.13
6212 7460 4.344865 GGCTCGCACCCCTTTCCA 62.345 66.667 0.00 0.00 0.00 3.53
6213 7461 2.044946 GCTCGCACCCCTTTCCAT 60.045 61.111 0.00 0.00 0.00 3.41
6214 7462 1.678970 GCTCGCACCCCTTTCCATT 60.679 57.895 0.00 0.00 0.00 3.16
6215 7463 0.393808 GCTCGCACCCCTTTCCATTA 60.394 55.000 0.00 0.00 0.00 1.90
6216 7464 1.953311 GCTCGCACCCCTTTCCATTAA 60.953 52.381 0.00 0.00 0.00 1.40
6217 7465 2.654863 CTCGCACCCCTTTCCATTAAT 58.345 47.619 0.00 0.00 0.00 1.40
6218 7466 3.023832 CTCGCACCCCTTTCCATTAATT 58.976 45.455 0.00 0.00 0.00 1.40
6219 7467 3.436243 TCGCACCCCTTTCCATTAATTT 58.564 40.909 0.00 0.00 0.00 1.82
6220 7468 3.835395 TCGCACCCCTTTCCATTAATTTT 59.165 39.130 0.00 0.00 0.00 1.82
6221 7469 3.932089 CGCACCCCTTTCCATTAATTTTG 59.068 43.478 0.00 0.00 0.00 2.44
6222 7470 3.689161 GCACCCCTTTCCATTAATTTTGC 59.311 43.478 0.00 0.00 0.00 3.68
6223 7471 4.805609 GCACCCCTTTCCATTAATTTTGCA 60.806 41.667 0.00 0.00 0.00 4.08
6224 7472 5.312079 CACCCCTTTCCATTAATTTTGCAA 58.688 37.500 0.00 0.00 0.00 4.08
6225 7473 5.945191 CACCCCTTTCCATTAATTTTGCAAT 59.055 36.000 0.00 0.00 0.00 3.56
6226 7474 6.093909 CACCCCTTTCCATTAATTTTGCAATC 59.906 38.462 0.00 0.00 0.00 2.67
6227 7475 6.179040 CCCCTTTCCATTAATTTTGCAATCA 58.821 36.000 0.00 0.00 0.00 2.57
6228 7476 6.658391 CCCCTTTCCATTAATTTTGCAATCAA 59.342 34.615 0.00 0.00 0.00 2.57
6229 7477 7.361971 CCCCTTTCCATTAATTTTGCAATCAAC 60.362 37.037 0.00 0.00 30.75 3.18
6230 7478 7.235777 CCTTTCCATTAATTTTGCAATCAACG 58.764 34.615 0.00 0.00 30.75 4.10
6231 7479 6.718454 TTCCATTAATTTTGCAATCAACGG 57.282 33.333 0.00 0.00 30.75 4.44
6232 7480 6.030548 TCCATTAATTTTGCAATCAACGGA 57.969 33.333 0.00 0.00 30.75 4.69
6233 7481 6.459066 TCCATTAATTTTGCAATCAACGGAA 58.541 32.000 0.00 0.00 30.75 4.30
6234 7482 6.931281 TCCATTAATTTTGCAATCAACGGAAA 59.069 30.769 0.00 0.00 30.75 3.13
6235 7483 7.605691 TCCATTAATTTTGCAATCAACGGAAAT 59.394 29.630 0.00 0.00 30.75 2.17
6236 7484 8.877779 CCATTAATTTTGCAATCAACGGAAATA 58.122 29.630 0.00 0.00 30.75 1.40
6237 7485 9.687717 CATTAATTTTGCAATCAACGGAAATAC 57.312 29.630 0.00 0.00 30.75 1.89
6238 7486 8.818141 TTAATTTTGCAATCAACGGAAATACA 57.182 26.923 0.00 0.00 30.75 2.29
6239 7487 7.903995 AATTTTGCAATCAACGGAAATACAT 57.096 28.000 0.00 0.00 30.75 2.29
6240 7488 6.702972 TTTTGCAATCAACGGAAATACATG 57.297 33.333 0.00 0.00 30.75 3.21
6241 7489 4.368874 TGCAATCAACGGAAATACATGG 57.631 40.909 0.00 0.00 0.00 3.66
6242 7490 3.761218 TGCAATCAACGGAAATACATGGT 59.239 39.130 0.00 0.00 0.00 3.55
6243 7491 4.142491 TGCAATCAACGGAAATACATGGTC 60.142 41.667 0.00 0.00 0.00 4.02
6244 7492 4.733523 GCAATCAACGGAAATACATGGTCC 60.734 45.833 0.00 0.00 0.00 4.46
6245 7493 3.704800 TCAACGGAAATACATGGTCCA 57.295 42.857 0.00 0.00 0.00 4.02
6246 7494 3.605634 TCAACGGAAATACATGGTCCAG 58.394 45.455 0.00 0.00 0.00 3.86
6247 7495 3.008594 TCAACGGAAATACATGGTCCAGT 59.991 43.478 0.00 0.00 0.00 4.00
6248 7496 4.223255 TCAACGGAAATACATGGTCCAGTA 59.777 41.667 0.00 0.81 0.00 2.74
6249 7497 4.402056 ACGGAAATACATGGTCCAGTAG 57.598 45.455 0.00 0.00 0.00 2.57
6250 7498 3.773119 ACGGAAATACATGGTCCAGTAGT 59.227 43.478 0.00 0.00 0.00 2.73
6251 7499 4.224370 ACGGAAATACATGGTCCAGTAGTT 59.776 41.667 11.49 11.49 32.00 2.24
6252 7500 4.809426 CGGAAATACATGGTCCAGTAGTTC 59.191 45.833 21.16 21.16 41.78 3.01
6253 7501 5.395324 CGGAAATACATGGTCCAGTAGTTCT 60.395 44.000 24.57 7.00 42.02 3.01
6254 7502 6.049790 GGAAATACATGGTCCAGTAGTTCTC 58.950 44.000 24.57 17.41 42.02 2.87
6255 7503 6.127026 GGAAATACATGGTCCAGTAGTTCTCT 60.127 42.308 24.57 6.29 42.02 3.10
6256 7504 7.069578 GGAAATACATGGTCCAGTAGTTCTCTA 59.930 40.741 24.57 4.01 42.02 2.43
6257 7505 7.589958 AATACATGGTCCAGTAGTTCTCTAG 57.410 40.000 0.00 0.00 0.00 2.43
6258 7506 4.282496 ACATGGTCCAGTAGTTCTCTAGG 58.718 47.826 0.00 0.00 0.00 3.02
6259 7507 4.264442 ACATGGTCCAGTAGTTCTCTAGGT 60.264 45.833 0.00 0.00 0.00 3.08
6260 7508 5.044328 ACATGGTCCAGTAGTTCTCTAGGTA 60.044 44.000 0.00 0.00 0.00 3.08
6261 7509 5.728937 TGGTCCAGTAGTTCTCTAGGTAT 57.271 43.478 0.00 0.00 0.00 2.73
6262 7510 5.692928 TGGTCCAGTAGTTCTCTAGGTATC 58.307 45.833 0.00 0.00 0.00 2.24
6263 7511 5.193124 TGGTCCAGTAGTTCTCTAGGTATCA 59.807 44.000 0.00 0.00 0.00 2.15
6264 7512 6.126156 TGGTCCAGTAGTTCTCTAGGTATCAT 60.126 42.308 0.00 0.00 0.00 2.45
6265 7513 7.073343 TGGTCCAGTAGTTCTCTAGGTATCATA 59.927 40.741 0.00 0.00 0.00 2.15
6266 7514 7.391275 GGTCCAGTAGTTCTCTAGGTATCATAC 59.609 44.444 0.00 0.00 0.00 2.39
6282 7530 7.420002 GGTATCATACCCAAAATAAAACGACC 58.580 38.462 1.80 0.00 43.18 4.79
6283 7531 7.067251 GGTATCATACCCAAAATAAAACGACCA 59.933 37.037 1.80 0.00 43.18 4.02
6284 7532 6.256912 TCATACCCAAAATAAAACGACCAC 57.743 37.500 0.00 0.00 0.00 4.16
6285 7533 3.629438 ACCCAAAATAAAACGACCACG 57.371 42.857 0.00 0.00 45.75 4.94
6286 7534 3.212685 ACCCAAAATAAAACGACCACGA 58.787 40.909 0.00 0.00 42.66 4.35
6287 7535 3.251487 ACCCAAAATAAAACGACCACGAG 59.749 43.478 0.00 0.00 42.66 4.18
6288 7536 3.499157 CCCAAAATAAAACGACCACGAGA 59.501 43.478 0.00 0.00 42.66 4.04
6289 7537 4.460505 CCAAAATAAAACGACCACGAGAC 58.539 43.478 0.00 0.00 42.66 3.36
6290 7538 4.460505 CAAAATAAAACGACCACGAGACC 58.539 43.478 0.00 0.00 42.66 3.85
6291 7539 2.375173 ATAAAACGACCACGAGACCC 57.625 50.000 0.00 0.00 42.66 4.46
6292 7540 1.039068 TAAAACGACCACGAGACCCA 58.961 50.000 0.00 0.00 42.66 4.51
6293 7541 0.178533 AAAACGACCACGAGACCCAA 59.821 50.000 0.00 0.00 42.66 4.12
6294 7542 0.178533 AAACGACCACGAGACCCAAA 59.821 50.000 0.00 0.00 42.66 3.28
6295 7543 0.178533 AACGACCACGAGACCCAAAA 59.821 50.000 0.00 0.00 42.66 2.44
6296 7544 0.395312 ACGACCACGAGACCCAAAAT 59.605 50.000 0.00 0.00 42.66 1.82
6297 7545 1.619827 ACGACCACGAGACCCAAAATA 59.380 47.619 0.00 0.00 42.66 1.40
6298 7546 2.037511 ACGACCACGAGACCCAAAATAA 59.962 45.455 0.00 0.00 42.66 1.40
6299 7547 2.671396 CGACCACGAGACCCAAAATAAG 59.329 50.000 0.00 0.00 42.66 1.73
6300 7548 3.615592 CGACCACGAGACCCAAAATAAGA 60.616 47.826 0.00 0.00 42.66 2.10
6301 7549 3.671716 ACCACGAGACCCAAAATAAGAC 58.328 45.455 0.00 0.00 0.00 3.01
6302 7550 3.326880 ACCACGAGACCCAAAATAAGACT 59.673 43.478 0.00 0.00 0.00 3.24
6303 7551 3.684788 CCACGAGACCCAAAATAAGACTG 59.315 47.826 0.00 0.00 0.00 3.51
6304 7552 4.562757 CCACGAGACCCAAAATAAGACTGA 60.563 45.833 0.00 0.00 0.00 3.41
6305 7553 4.994852 CACGAGACCCAAAATAAGACTGAA 59.005 41.667 0.00 0.00 0.00 3.02
6306 7554 5.468746 CACGAGACCCAAAATAAGACTGAAA 59.531 40.000 0.00 0.00 0.00 2.69
6307 7555 5.701290 ACGAGACCCAAAATAAGACTGAAAG 59.299 40.000 0.00 0.00 42.29 2.62
6308 7556 5.122396 CGAGACCCAAAATAAGACTGAAAGG 59.878 44.000 0.00 0.00 39.30 3.11
6309 7557 5.325239 AGACCCAAAATAAGACTGAAAGGG 58.675 41.667 0.00 0.00 39.30 3.95
6310 7558 4.416516 ACCCAAAATAAGACTGAAAGGGG 58.583 43.478 0.00 0.00 39.30 4.79
6311 7559 4.107311 ACCCAAAATAAGACTGAAAGGGGA 59.893 41.667 0.00 0.00 39.30 4.81
6312 7560 4.706962 CCCAAAATAAGACTGAAAGGGGAG 59.293 45.833 0.00 0.00 39.30 4.30
6313 7561 4.706962 CCAAAATAAGACTGAAAGGGGAGG 59.293 45.833 0.00 0.00 39.30 4.30
6314 7562 5.516591 CCAAAATAAGACTGAAAGGGGAGGA 60.517 44.000 0.00 0.00 39.30 3.71
6315 7563 5.443230 AAATAAGACTGAAAGGGGAGGAG 57.557 43.478 0.00 0.00 39.30 3.69
6316 7564 0.988063 AAGACTGAAAGGGGAGGAGC 59.012 55.000 0.00 0.00 39.30 4.70
6317 7565 1.219393 GACTGAAAGGGGAGGAGCG 59.781 63.158 0.00 0.00 39.30 5.03
6318 7566 1.229209 ACTGAAAGGGGAGGAGCGA 60.229 57.895 0.00 0.00 39.30 4.93
6319 7567 1.261238 ACTGAAAGGGGAGGAGCGAG 61.261 60.000 0.00 0.00 39.30 5.03
6320 7568 2.188207 GAAAGGGGAGGAGCGAGC 59.812 66.667 0.00 0.00 0.00 5.03
6321 7569 2.284995 AAAGGGGAGGAGCGAGCT 60.285 61.111 0.00 0.00 0.00 4.09
6322 7570 2.585791 GAAAGGGGAGGAGCGAGCTG 62.586 65.000 0.84 0.00 0.00 4.24
6325 7573 3.535962 GGGAGGAGCGAGCTGGAG 61.536 72.222 0.84 0.00 0.00 3.86
6326 7574 4.219999 GGAGGAGCGAGCTGGAGC 62.220 72.222 0.84 0.00 42.49 4.70
6327 7575 3.456365 GAGGAGCGAGCTGGAGCA 61.456 66.667 0.84 0.00 45.16 4.26
6328 7576 2.763292 AGGAGCGAGCTGGAGCAT 60.763 61.111 0.84 0.00 45.16 3.79
6329 7577 2.280052 GGAGCGAGCTGGAGCATC 60.280 66.667 0.84 0.00 45.16 3.91
6330 7578 2.657944 GAGCGAGCTGGAGCATCG 60.658 66.667 0.84 13.00 45.16 3.84
6331 7579 3.131196 GAGCGAGCTGGAGCATCGA 62.131 63.158 18.48 0.00 45.16 3.59
6332 7580 2.959071 GCGAGCTGGAGCATCGAC 60.959 66.667 18.48 9.91 45.16 4.20
6333 7581 2.491621 CGAGCTGGAGCATCGACA 59.508 61.111 12.34 0.00 45.16 4.35
6334 7582 1.588403 CGAGCTGGAGCATCGACAG 60.588 63.158 12.34 0.00 45.16 3.51
6335 7583 1.227205 GAGCTGGAGCATCGACAGG 60.227 63.158 0.00 0.00 45.16 4.00
6336 7584 1.670949 GAGCTGGAGCATCGACAGGA 61.671 60.000 0.00 0.00 45.16 3.86
6337 7585 1.219124 GCTGGAGCATCGACAGGAA 59.781 57.895 2.60 0.00 41.59 3.36
6338 7586 0.391661 GCTGGAGCATCGACAGGAAA 60.392 55.000 2.60 0.00 41.59 3.13
6339 7587 1.363744 CTGGAGCATCGACAGGAAAC 58.636 55.000 0.00 0.00 34.37 2.78
6340 7588 0.036388 TGGAGCATCGACAGGAAACC 60.036 55.000 0.00 0.00 34.37 3.27
6341 7589 0.744771 GGAGCATCGACAGGAAACCC 60.745 60.000 0.00 0.00 34.37 4.11
6342 7590 0.036388 GAGCATCGACAGGAAACCCA 60.036 55.000 0.00 0.00 0.00 4.51
6343 7591 0.321653 AGCATCGACAGGAAACCCAC 60.322 55.000 0.00 0.00 0.00 4.61
6344 7592 1.305930 GCATCGACAGGAAACCCACC 61.306 60.000 0.00 0.00 0.00 4.61
6345 7593 1.019278 CATCGACAGGAAACCCACCG 61.019 60.000 0.00 0.00 0.00 4.94
6346 7594 2.798148 ATCGACAGGAAACCCACCGC 62.798 60.000 0.00 0.00 0.00 5.68
6347 7595 2.112297 GACAGGAAACCCACCGCA 59.888 61.111 0.00 0.00 0.00 5.69
6348 7596 1.966451 GACAGGAAACCCACCGCAG 60.966 63.158 0.00 0.00 0.00 5.18
6380 7628 2.595095 GGATCAACCGCCATGGGA 59.405 61.111 15.13 1.44 44.64 4.37
6381 7629 1.823899 GGATCAACCGCCATGGGAC 60.824 63.158 15.13 0.00 44.64 4.46
6382 7630 2.124736 ATCAACCGCCATGGGACG 60.125 61.111 15.13 9.45 44.64 4.79
6383 7631 2.587322 GATCAACCGCCATGGGACGA 62.587 60.000 15.13 0.59 44.64 4.20
6384 7632 2.191786 ATCAACCGCCATGGGACGAA 62.192 55.000 15.13 0.00 44.64 3.85
6385 7633 1.969064 CAACCGCCATGGGACGAAA 60.969 57.895 15.13 0.00 44.64 3.46
6386 7634 1.228306 AACCGCCATGGGACGAAAA 60.228 52.632 15.13 0.00 44.64 2.29
6387 7635 1.520600 AACCGCCATGGGACGAAAAC 61.521 55.000 15.13 0.00 44.64 2.43
6388 7636 2.696759 CCGCCATGGGACGAAAACC 61.697 63.158 15.13 0.00 0.00 3.27
6389 7637 1.674322 CGCCATGGGACGAAAACCT 60.674 57.895 15.13 0.00 0.00 3.50
6390 7638 1.883021 GCCATGGGACGAAAACCTG 59.117 57.895 15.13 0.00 0.00 4.00
6391 7639 0.608035 GCCATGGGACGAAAACCTGA 60.608 55.000 15.13 0.00 0.00 3.86
6392 7640 1.165270 CCATGGGACGAAAACCTGAC 58.835 55.000 2.85 0.00 0.00 3.51
6393 7641 0.796312 CATGGGACGAAAACCTGACG 59.204 55.000 0.00 0.00 0.00 4.35
6394 7642 0.682852 ATGGGACGAAAACCTGACGA 59.317 50.000 0.00 0.00 0.00 4.20
6395 7643 0.249573 TGGGACGAAAACCTGACGAC 60.250 55.000 0.00 0.00 0.00 4.34
6396 7644 0.249573 GGGACGAAAACCTGACGACA 60.250 55.000 0.00 0.00 0.00 4.35
6397 7645 0.857287 GGACGAAAACCTGACGACAC 59.143 55.000 0.00 0.00 0.00 3.67
6398 7646 0.857287 GACGAAAACCTGACGACACC 59.143 55.000 0.00 0.00 0.00 4.16
6399 7647 0.872881 ACGAAAACCTGACGACACCG 60.873 55.000 0.00 0.00 42.50 4.94
6526 7775 7.333323 TCATGATCAGCTGTGGTATATATTGG 58.667 38.462 14.67 0.00 0.00 3.16
6527 7776 5.491070 TGATCAGCTGTGGTATATATTGGC 58.509 41.667 14.67 0.00 0.00 4.52
6528 7777 3.925379 TCAGCTGTGGTATATATTGGCG 58.075 45.455 14.67 0.00 0.00 5.69
6529 7778 2.416547 CAGCTGTGGTATATATTGGCGC 59.583 50.000 5.25 0.00 0.00 6.53
6530 7779 2.038426 AGCTGTGGTATATATTGGCGCA 59.962 45.455 10.83 0.00 0.00 6.09
6531 7780 2.811431 GCTGTGGTATATATTGGCGCAA 59.189 45.455 10.83 0.00 0.00 4.85
6532 7781 3.440173 GCTGTGGTATATATTGGCGCAAT 59.560 43.478 10.83 9.96 37.80 3.56
6533 7782 4.634004 GCTGTGGTATATATTGGCGCAATA 59.366 41.667 10.83 11.92 40.04 1.90
6534 7783 5.220662 GCTGTGGTATATATTGGCGCAATAG 60.221 44.000 10.83 0.04 39.28 1.73
6535 7784 4.634004 TGTGGTATATATTGGCGCAATAGC 59.366 41.667 10.83 7.00 39.28 2.97
6543 7792 3.590824 GCGCAATAGCCAACAGGT 58.409 55.556 0.30 0.00 37.52 4.00
6596 7845 1.034292 GGCTAAGCAGGCCCTGAAAG 61.034 60.000 16.85 8.94 43.49 2.62
6668 7917 2.032681 GTCTCCTGCACCACCACC 59.967 66.667 0.00 0.00 0.00 4.61
6669 7918 2.447572 TCTCCTGCACCACCACCA 60.448 61.111 0.00 0.00 0.00 4.17
6670 7919 2.281761 CTCCTGCACCACCACCAC 60.282 66.667 0.00 0.00 0.00 4.16
6671 7920 3.093172 TCCTGCACCACCACCACA 61.093 61.111 0.00 0.00 0.00 4.17
6672 7921 2.595463 CCTGCACCACCACCACAG 60.595 66.667 0.00 0.00 0.00 3.66
6684 7933 4.756642 CCACCACCACAGCAATATAGTATG 59.243 45.833 0.00 0.00 0.00 2.39
6685 7934 4.756642 CACCACCACAGCAATATAGTATGG 59.243 45.833 0.00 0.00 0.00 2.74
6686 7935 4.412199 ACCACCACAGCAATATAGTATGGT 59.588 41.667 0.00 0.00 39.55 3.55
6687 7936 5.929697 CACCACAGCAATATAGTATGGTG 57.070 43.478 6.14 6.14 46.86 4.17
6725 7974 0.719465 CCGAAAGAAACCACGGATCG 59.281 55.000 0.00 0.00 46.94 3.69
6778 8027 1.065418 AGTTACCTCTTGGGATTGCCG 60.065 52.381 0.00 0.00 38.76 5.69
6833 8082 1.136611 GCAGCAAACTGTTCGTACGAG 60.137 52.381 18.64 9.72 46.30 4.18
6855 8104 2.203126 GGCTCCTGCGGATGAAGG 60.203 66.667 0.00 0.00 43.21 3.46
6921 8196 5.522460 TCTGTCAAAACAAAACGAGAGGTAG 59.478 40.000 0.00 0.00 34.24 3.18
6925 8200 3.314541 AACAAAACGAGAGGTAGCGAT 57.685 42.857 0.00 0.00 0.00 4.58
6926 8201 2.877335 ACAAAACGAGAGGTAGCGATC 58.123 47.619 0.00 0.00 0.00 3.69
6927 8202 1.846782 CAAAACGAGAGGTAGCGATCG 59.153 52.381 11.69 11.69 40.86 3.69
6928 8203 1.376543 AAACGAGAGGTAGCGATCGA 58.623 50.000 21.57 0.00 38.50 3.59
6929 8204 0.938713 AACGAGAGGTAGCGATCGAG 59.061 55.000 21.57 0.25 38.50 4.04
6930 8205 0.179078 ACGAGAGGTAGCGATCGAGT 60.179 55.000 21.57 7.53 38.50 4.18
6931 8206 0.233590 CGAGAGGTAGCGATCGAGTG 59.766 60.000 21.57 0.00 37.35 3.51
6932 8207 0.589223 GAGAGGTAGCGATCGAGTGG 59.411 60.000 21.57 0.00 0.00 4.00
6933 8208 0.107116 AGAGGTAGCGATCGAGTGGT 60.107 55.000 21.57 0.00 0.00 4.16
6934 8209 1.140452 AGAGGTAGCGATCGAGTGGTA 59.860 52.381 21.57 0.00 0.00 3.25
6958 8233 2.568623 ACCTTGCTTGACGGAAGAAT 57.431 45.000 0.89 0.00 43.07 2.40
6994 8269 4.072088 GTCGTGCGCCCTGAAACG 62.072 66.667 4.18 7.22 37.38 3.60
7012 8287 6.439599 TGAAACGAAAAACAGAAGAACAACA 58.560 32.000 0.00 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 1.382522 TCAAGCCGATCCAAATCTGC 58.617 50.000 0.00 0.00 41.10 4.26
78 85 0.897863 CCGTGGATTTTTCAGGGGCA 60.898 55.000 0.00 0.00 36.75 5.36
83 90 4.314740 TTTTCACCCGTGGATTTTTCAG 57.685 40.909 0.00 0.00 0.00 3.02
118 128 4.826733 CCAATGAATATCCATCGGGTTTGA 59.173 41.667 0.00 0.00 34.93 2.69
135 162 2.619931 TGTCTCAAGAGGACCCAATGA 58.380 47.619 0.00 0.00 33.22 2.57
174 201 9.905713 AGAATGGAAGAGCTTATGTTAACATTA 57.094 29.630 25.31 15.93 37.76 1.90
337 402 8.677871 TGACATTTAATCCCCTCCATAACATAT 58.322 33.333 0.00 0.00 0.00 1.78
384 452 8.659925 AACATGCAAAAGAAATTACACAATCA 57.340 26.923 0.00 0.00 0.00 2.57
534 617 2.126071 CGACCCGATTGCTCGTGT 60.126 61.111 0.00 0.00 43.49 4.49
553 636 3.814268 CATGGACGGCGCCCAAAG 61.814 66.667 21.12 11.45 37.22 2.77
565 648 3.953612 GGATATGCTTTTGTGTCCATGGA 59.046 43.478 11.44 11.44 0.00 3.41
649 736 2.951642 TCCAATAATGCTGCACCTAAGC 59.048 45.455 3.57 0.00 41.22 3.09
743 831 5.282510 AGACGGACGTAATTGAATGATCTC 58.717 41.667 0.00 0.00 0.00 2.75
898 991 2.037687 CCTGCCCTGCCATGGAAA 59.962 61.111 18.40 0.87 0.00 3.13
953 1052 1.758514 GAGAGGGAGATGGCCGTCA 60.759 63.158 26.70 0.00 43.49 4.35
954 1053 2.851071 CGAGAGGGAGATGGCCGTC 61.851 68.421 17.85 17.85 41.85 4.79
955 1054 2.835431 CGAGAGGGAGATGGCCGT 60.835 66.667 0.00 0.00 0.00 5.68
973 1072 0.748367 GGAAAGGAGAATGACGGGGC 60.748 60.000 0.00 0.00 0.00 5.80
1037 1137 2.300437 GTGGCTATATTTCGCCTCCTCT 59.700 50.000 10.51 0.00 46.42 3.69
1146 1246 1.704007 GGAGGGAGGAGGAGGCATTG 61.704 65.000 0.00 0.00 0.00 2.82
1158 1258 2.365370 AGCAGGAGCAGGAGGGAG 60.365 66.667 0.00 0.00 45.49 4.30
1159 1259 2.364842 GAGCAGGAGCAGGAGGGA 60.365 66.667 0.00 0.00 45.49 4.20
1160 1260 3.478274 GGAGCAGGAGCAGGAGGG 61.478 72.222 0.00 0.00 45.49 4.30
1161 1261 3.478274 GGGAGCAGGAGCAGGAGG 61.478 72.222 0.00 0.00 45.49 4.30
1162 1262 3.847602 CGGGAGCAGGAGCAGGAG 61.848 72.222 0.00 0.00 45.49 3.69
1324 1425 2.162754 CGTATCCCGAACGTGGCAC 61.163 63.158 7.79 7.79 39.56 5.01
1353 1454 3.658422 GACCCCCACCCAACCCTC 61.658 72.222 0.00 0.00 0.00 4.30
1356 1457 4.653888 CACGACCCCCACCCAACC 62.654 72.222 0.00 0.00 0.00 3.77
1357 1458 4.653888 CCACGACCCCCACCCAAC 62.654 72.222 0.00 0.00 0.00 3.77
1512 2053 0.737019 GCGACCGATAACCGAAACCA 60.737 55.000 0.00 0.00 41.76 3.67
1514 2055 1.627424 CGCGACCGATAACCGAAAC 59.373 57.895 0.00 0.00 41.76 2.78
1517 2058 4.892379 CGCGCGACCGATAACCGA 62.892 66.667 28.94 0.00 41.76 4.69
1548 2091 4.148825 CCTGCCTTCCGGGACTCG 62.149 72.222 0.00 0.00 43.17 4.18
1549 2092 4.475135 GCCTGCCTTCCGGGACTC 62.475 72.222 0.00 0.00 43.17 3.36
1555 2098 2.966309 GAAACGTGCCTGCCTTCCG 61.966 63.158 0.00 0.00 0.00 4.30
1559 2102 0.755327 AAAAGGAAACGTGCCTGCCT 60.755 50.000 10.66 0.00 35.50 4.75
1560 2103 0.597377 CAAAAGGAAACGTGCCTGCC 60.597 55.000 10.66 0.00 35.50 4.85
1561 2104 0.383949 TCAAAAGGAAACGTGCCTGC 59.616 50.000 10.66 0.00 35.50 4.85
1562 2105 2.665519 CGATCAAAAGGAAACGTGCCTG 60.666 50.000 10.66 0.94 35.50 4.85
1563 2106 1.535462 CGATCAAAAGGAAACGTGCCT 59.465 47.619 4.48 4.48 37.35 4.75
1567 2110 2.032030 CACAGCGATCAAAAGGAAACGT 60.032 45.455 0.00 0.00 33.85 3.99
1568 2111 2.574322 CACAGCGATCAAAAGGAAACG 58.426 47.619 0.00 0.00 34.24 3.60
1722 2265 2.556287 GGTCAGAAAAGGTGCGCG 59.444 61.111 0.00 0.00 0.00 6.86
1825 2397 3.364565 CCTGTAATTACGCGCAACAACTT 60.365 43.478 5.73 0.00 0.00 2.66
1839 2411 2.253513 GCGTGTGGCACCTGTAATT 58.746 52.632 16.26 0.00 42.87 1.40
1865 2437 4.637483 ATGTATGGAATCCAAAACAGCG 57.363 40.909 20.53 0.00 37.07 5.18
1867 2439 6.377996 TGGAGAATGTATGGAATCCAAAACAG 59.622 38.462 20.53 0.00 37.07 3.16
1880 2452 8.893219 ACATGTACTGTATTGGAGAATGTATG 57.107 34.615 0.00 0.00 35.91 2.39
1896 2468 1.449601 GGTGGGGCGACATGTACTG 60.450 63.158 0.00 0.00 0.00 2.74
1900 2472 1.852157 ATTCAGGTGGGGCGACATGT 61.852 55.000 0.00 0.00 0.00 3.21
1901 2473 0.680921 AATTCAGGTGGGGCGACATG 60.681 55.000 0.00 0.00 0.00 3.21
1902 2474 0.039618 AAATTCAGGTGGGGCGACAT 59.960 50.000 0.00 0.00 0.00 3.06
1903 2475 0.178975 AAAATTCAGGTGGGGCGACA 60.179 50.000 0.00 0.00 0.00 4.35
1904 2476 1.743394 CTAAAATTCAGGTGGGGCGAC 59.257 52.381 0.00 0.00 0.00 5.19
1905 2477 1.353022 ACTAAAATTCAGGTGGGGCGA 59.647 47.619 0.00 0.00 0.00 5.54
1906 2478 1.472480 CACTAAAATTCAGGTGGGGCG 59.528 52.381 0.00 0.00 0.00 6.13
1907 2479 2.525368 ACACTAAAATTCAGGTGGGGC 58.475 47.619 8.68 0.00 34.42 5.80
1908 2480 6.007703 TCTAAACACTAAAATTCAGGTGGGG 58.992 40.000 8.68 0.00 34.42 4.96
1909 2481 6.151144 CCTCTAAACACTAAAATTCAGGTGGG 59.849 42.308 8.68 0.00 34.42 4.61
1910 2482 6.151144 CCCTCTAAACACTAAAATTCAGGTGG 59.849 42.308 8.68 0.00 34.42 4.61
1911 2483 6.940298 TCCCTCTAAACACTAAAATTCAGGTG 59.060 38.462 0.00 0.00 35.99 4.00
2182 2768 6.628856 CGACACTGAAGCCAAATAAATAATCG 59.371 38.462 0.00 0.00 0.00 3.34
2228 2814 1.303309 GAATCCGGCCACATGAAGAG 58.697 55.000 2.24 0.00 0.00 2.85
2240 2826 3.235157 TGGTAAAGTACACGAATCCGG 57.765 47.619 0.00 0.00 40.78 5.14
2345 2931 4.444306 CCAGTTGACCTAGAAGAACAACCA 60.444 45.833 0.00 0.00 40.77 3.67
2447 3036 5.121925 CCTGATGAAAGAGACAAGTCACATG 59.878 44.000 2.72 0.00 0.00 3.21
3020 3781 9.389755 ACAAGCCAAAACAAACTGTTAAATATT 57.610 25.926 0.00 0.00 40.14 1.28
3022 3783 9.871238 TTACAAGCCAAAACAAACTGTTAAATA 57.129 25.926 0.00 0.00 40.14 1.40
3123 3884 2.159435 GCTAAACCGTAACATGCTTGGG 60.159 50.000 4.44 0.00 0.00 4.12
3342 4105 3.716872 AGGTATTGTAAGGGATCCTGGTG 59.283 47.826 12.58 0.00 32.13 4.17
3343 4106 4.022359 AGGTATTGTAAGGGATCCTGGT 57.978 45.455 12.58 0.00 32.13 4.00
3429 4192 6.721571 TCTACTTTGTTAGTACATTGCAGC 57.278 37.500 0.00 0.00 38.33 5.25
3434 4197 8.258007 TGCTGCTATCTACTTTGTTAGTACATT 58.742 33.333 0.00 0.00 38.33 2.71
3438 4627 6.701841 GCATGCTGCTATCTACTTTGTTAGTA 59.298 38.462 11.37 0.00 40.96 1.82
3439 4628 5.525378 GCATGCTGCTATCTACTTTGTTAGT 59.475 40.000 11.37 0.00 40.96 2.24
3440 4629 5.525012 TGCATGCTGCTATCTACTTTGTTAG 59.475 40.000 20.33 0.00 45.31 2.34
3508 4697 4.338118 TGAGTGAGTGCAAAGGGTTTTAAG 59.662 41.667 0.00 0.00 0.00 1.85
3510 4699 3.630312 GTGAGTGAGTGCAAAGGGTTTTA 59.370 43.478 0.00 0.00 0.00 1.52
3537 4726 6.116126 ACAAGAGAAAATCATAGGTGGTAGC 58.884 40.000 0.00 0.00 0.00 3.58
3826 5015 2.877335 AGGTAAAAGATCGTCGTGAGC 58.123 47.619 0.00 0.00 0.00 4.26
4088 5281 3.526931 ATGTCAGTGATGAAGTACCCG 57.473 47.619 0.00 0.00 0.00 5.28
4255 5448 7.878127 CGGTCAACCCATAGTGAATAATAGAAT 59.122 37.037 0.00 0.00 0.00 2.40
4256 5449 7.147620 ACGGTCAACCCATAGTGAATAATAGAA 60.148 37.037 0.00 0.00 0.00 2.10
4257 5450 6.325545 ACGGTCAACCCATAGTGAATAATAGA 59.674 38.462 0.00 0.00 0.00 1.98
4258 5451 6.522054 ACGGTCAACCCATAGTGAATAATAG 58.478 40.000 0.00 0.00 0.00 1.73
4281 5474 2.508526 AGTGATGAAGAACCTGGCAAC 58.491 47.619 0.00 0.00 0.00 4.17
4372 5565 3.515502 CAGGTGTGGTTCCTTCAGAGATA 59.484 47.826 0.00 0.00 32.37 1.98
4610 5803 0.724549 GCGTGAAATACCGTGCATCA 59.275 50.000 0.00 0.00 0.00 3.07
4885 6080 5.163683 CCAAGATGAGTTAGCAAATGTCCAG 60.164 44.000 0.00 0.00 0.00 3.86
4903 6098 2.412591 CTGTATCCCAGTCCCCAAGAT 58.587 52.381 0.00 0.00 36.37 2.40
4997 6194 3.423154 GGCCTCGGCACAGAAACG 61.423 66.667 10.51 0.00 44.11 3.60
5035 6232 5.813157 GGAAAACCTACTGAAGAGAGCATAC 59.187 44.000 0.00 0.00 0.00 2.39
5064 6261 4.817318 ACCAAAGACAAAGCCAAAGAAA 57.183 36.364 0.00 0.00 0.00 2.52
5109 6307 1.002792 GAAGCGGAAACAGGAACACAC 60.003 52.381 0.00 0.00 0.00 3.82
5145 6343 3.387699 ACCAAAGTACAGCAAGCCAAAAT 59.612 39.130 0.00 0.00 0.00 1.82
5158 6356 4.649088 AGCCAAAACAAGACCAAAGTAC 57.351 40.909 0.00 0.00 0.00 2.73
5176 6374 1.293924 CAGGTCGATGACATGAAGCC 58.706 55.000 5.74 0.00 45.54 4.35
5177 6375 2.015736 ACAGGTCGATGACATGAAGC 57.984 50.000 17.26 0.00 45.54 3.86
5179 6377 2.698803 CCAACAGGTCGATGACATGAA 58.301 47.619 17.26 0.00 45.54 2.57
5180 6378 1.675714 GCCAACAGGTCGATGACATGA 60.676 52.381 17.26 0.00 45.54 3.07
5182 6380 0.615331 AGCCAACAGGTCGATGACAT 59.385 50.000 0.00 0.00 33.68 3.06
5183 6381 0.396435 AAGCCAACAGGTCGATGACA 59.604 50.000 0.00 0.00 33.68 3.58
5184 6382 2.000447 GTAAGCCAACAGGTCGATGAC 59.000 52.381 0.00 0.00 0.00 3.06
5185 6383 1.899814 AGTAAGCCAACAGGTCGATGA 59.100 47.619 0.00 0.00 0.00 2.92
5186 6384 2.271800 GAGTAAGCCAACAGGTCGATG 58.728 52.381 0.00 0.00 0.00 3.84
5187 6385 1.899814 TGAGTAAGCCAACAGGTCGAT 59.100 47.619 0.00 0.00 0.00 3.59
5188 6386 1.272490 CTGAGTAAGCCAACAGGTCGA 59.728 52.381 0.00 0.00 0.00 4.20
5189 6387 1.714794 CTGAGTAAGCCAACAGGTCG 58.285 55.000 0.00 0.00 0.00 4.79
5200 6398 2.354259 CAGAAGGGCTTGCTGAGTAAG 58.646 52.381 5.90 5.90 0.00 2.34
5201 6399 1.611673 GCAGAAGGGCTTGCTGAGTAA 60.612 52.381 9.13 0.00 0.00 2.24
5202 6400 0.036010 GCAGAAGGGCTTGCTGAGTA 60.036 55.000 9.13 0.00 0.00 2.59
5203 6401 1.303155 GCAGAAGGGCTTGCTGAGT 60.303 57.895 9.13 0.00 0.00 3.41
5204 6402 1.002379 AGCAGAAGGGCTTGCTGAG 60.002 57.895 9.13 0.00 42.71 3.35
5205 6403 3.164479 AGCAGAAGGGCTTGCTGA 58.836 55.556 9.13 0.00 42.71 4.26
5206 6404 3.275088 CAGCAGAAGGGCTTGCTG 58.725 61.111 11.48 11.48 42.71 4.41
5207 6405 2.675772 GCAGCAGAAGGGCTTGCT 60.676 61.111 0.00 0.00 42.71 3.91
5208 6406 2.273912 AAGCAGCAGAAGGGCTTGC 61.274 57.895 0.00 0.00 45.44 4.01
5209 6407 4.092343 AAGCAGCAGAAGGGCTTG 57.908 55.556 0.00 0.00 45.44 4.01
5212 6410 1.174712 TTCACAAGCAGCAGAAGGGC 61.175 55.000 0.00 0.00 0.00 5.19
5213 6411 0.879765 CTTCACAAGCAGCAGAAGGG 59.120 55.000 0.00 0.00 35.13 3.95
5214 6412 1.534595 GACTTCACAAGCAGCAGAAGG 59.465 52.381 16.39 4.52 41.25 3.46
5215 6413 2.479656 GAGACTTCACAAGCAGCAGAAG 59.520 50.000 12.59 12.59 42.32 2.85
5216 6414 2.103771 AGAGACTTCACAAGCAGCAGAA 59.896 45.455 0.00 0.00 0.00 3.02
5217 6415 1.690893 AGAGACTTCACAAGCAGCAGA 59.309 47.619 0.00 0.00 0.00 4.26
5218 6416 2.166821 AGAGACTTCACAAGCAGCAG 57.833 50.000 0.00 0.00 0.00 4.24
5219 6417 2.365293 TGTAGAGACTTCACAAGCAGCA 59.635 45.455 0.00 0.00 0.00 4.41
5220 6418 3.032017 TGTAGAGACTTCACAAGCAGC 57.968 47.619 0.00 0.00 0.00 5.25
5221 6419 6.551385 AAATTGTAGAGACTTCACAAGCAG 57.449 37.500 8.30 0.00 35.77 4.24
5222 6420 6.767902 AGAAAATTGTAGAGACTTCACAAGCA 59.232 34.615 8.30 0.00 35.77 3.91
5223 6421 7.172361 AGAGAAAATTGTAGAGACTTCACAAGC 59.828 37.037 8.30 0.00 35.77 4.01
5224 6422 8.600449 AGAGAAAATTGTAGAGACTTCACAAG 57.400 34.615 8.30 0.00 35.77 3.16
5225 6423 8.424918 AGAGAGAAAATTGTAGAGACTTCACAA 58.575 33.333 5.56 5.56 36.66 3.33
5226 6424 7.957002 AGAGAGAAAATTGTAGAGACTTCACA 58.043 34.615 0.00 0.00 0.00 3.58
5227 6425 9.915629 TTAGAGAGAAAATTGTAGAGACTTCAC 57.084 33.333 0.00 0.00 0.00 3.18
5228 6426 9.915629 GTTAGAGAGAAAATTGTAGAGACTTCA 57.084 33.333 0.00 0.00 0.00 3.02
5229 6427 9.068008 CGTTAGAGAGAAAATTGTAGAGACTTC 57.932 37.037 0.00 0.00 0.00 3.01
5230 6428 8.578151 ACGTTAGAGAGAAAATTGTAGAGACTT 58.422 33.333 0.00 0.00 0.00 3.01
5231 6429 8.113173 ACGTTAGAGAGAAAATTGTAGAGACT 57.887 34.615 0.00 0.00 0.00 3.24
5232 6430 9.493206 CTACGTTAGAGAGAAAATTGTAGAGAC 57.507 37.037 0.00 0.00 30.90 3.36
5233 6431 9.228949 ACTACGTTAGAGAGAAAATTGTAGAGA 57.771 33.333 0.00 0.00 33.02 3.10
5234 6432 9.279904 CACTACGTTAGAGAGAAAATTGTAGAG 57.720 37.037 0.00 0.00 33.02 2.43
5235 6433 9.006839 TCACTACGTTAGAGAGAAAATTGTAGA 57.993 33.333 0.00 0.00 33.02 2.59
5236 6434 9.622004 TTCACTACGTTAGAGAGAAAATTGTAG 57.378 33.333 0.00 0.00 34.47 2.74
5237 6435 9.403110 GTTCACTACGTTAGAGAGAAAATTGTA 57.597 33.333 0.00 0.00 0.00 2.41
5260 6458 6.071616 TGCCACCTGTATTAGAAAAATGGTTC 60.072 38.462 0.00 0.00 0.00 3.62
5269 6467 2.181125 TCCGTGCCACCTGTATTAGAA 58.819 47.619 0.00 0.00 0.00 2.10
5271 6469 2.910688 ATCCGTGCCACCTGTATTAG 57.089 50.000 0.00 0.00 0.00 1.73
5501 6699 6.587608 CCTCTCAAGATTTTTGCAAACCATAC 59.412 38.462 12.39 2.43 0.00 2.39
5515 6713 5.412904 CGTCTTTTTAAGGCCTCTCAAGATT 59.587 40.000 5.23 0.00 0.00 2.40
5591 6789 2.817258 TGATGGTTTTTGTAGAAGGGCG 59.183 45.455 0.00 0.00 0.00 6.13
5596 6794 4.462483 GGCAGGATGATGGTTTTTGTAGAA 59.538 41.667 0.00 0.00 39.69 2.10
5858 7056 6.405731 CCTTTCAAAGGTCACTTTTGATGACA 60.406 38.462 15.24 0.00 46.89 3.58
5891 7089 4.332819 GTCGTAACTAAAAGCAGATGCCAT 59.667 41.667 0.14 0.00 43.38 4.40
5915 7113 2.677199 TCACATTCAGAGTCGCAAGTC 58.323 47.619 0.00 0.00 39.48 3.01
5916 7114 2.820059 TCACATTCAGAGTCGCAAGT 57.180 45.000 0.00 0.00 39.48 3.16
5917 7115 2.159734 GCTTCACATTCAGAGTCGCAAG 60.160 50.000 0.00 0.00 0.00 4.01
5920 7118 0.723981 GGCTTCACATTCAGAGTCGC 59.276 55.000 0.00 0.00 0.00 5.19
6033 7241 4.380843 TGGAAAACAGATCAAAGGGCTA 57.619 40.909 0.00 0.00 0.00 3.93
6034 7242 3.243359 TGGAAAACAGATCAAAGGGCT 57.757 42.857 0.00 0.00 0.00 5.19
6035 7243 4.541973 AATGGAAAACAGATCAAAGGGC 57.458 40.909 0.00 0.00 0.00 5.19
6071 7319 5.233050 CGCTCCTTATTGTAATCAGACACTG 59.767 44.000 0.00 0.00 0.00 3.66
6072 7320 5.105310 ACGCTCCTTATTGTAATCAGACACT 60.105 40.000 0.00 0.00 0.00 3.55
6087 7335 2.038033 AGGTTGTGCTTTACGCTCCTTA 59.962 45.455 0.00 0.00 40.11 2.69
6137 7385 3.219981 CTGCACGCGTAAAAACGTAAAT 58.780 40.909 13.44 0.00 41.32 1.40
6138 7386 2.030213 ACTGCACGCGTAAAAACGTAAA 59.970 40.909 13.44 0.00 41.32 2.01
6141 7389 0.374410 AACTGCACGCGTAAAAACGT 59.626 45.000 13.44 0.26 44.75 3.99
6142 7390 1.032080 GAACTGCACGCGTAAAAACG 58.968 50.000 13.44 0.00 0.00 3.60
6143 7391 2.378507 AGAACTGCACGCGTAAAAAC 57.621 45.000 13.44 2.19 0.00 2.43
6144 7392 2.597971 CGAAGAACTGCACGCGTAAAAA 60.598 45.455 13.44 0.00 0.00 1.94
6148 7396 0.238025 TACGAAGAACTGCACGCGTA 59.762 50.000 13.44 0.00 33.69 4.42
6183 7431 0.753479 TGCGAGCCTGGTTGGAAAAA 60.753 50.000 0.00 0.00 38.35 1.94
6184 7432 1.152860 TGCGAGCCTGGTTGGAAAA 60.153 52.632 0.00 0.00 38.35 2.29
6185 7433 1.896660 GTGCGAGCCTGGTTGGAAA 60.897 57.895 0.00 0.00 38.35 3.13
6186 7434 2.281484 GTGCGAGCCTGGTTGGAA 60.281 61.111 0.00 0.00 38.35 3.53
6187 7435 4.329545 GGTGCGAGCCTGGTTGGA 62.330 66.667 0.00 0.00 38.35 3.53
6192 7440 4.351054 AAAGGGGTGCGAGCCTGG 62.351 66.667 0.00 0.00 35.71 4.45
6193 7441 2.747855 GAAAGGGGTGCGAGCCTG 60.748 66.667 0.00 0.00 35.71 4.85
6194 7442 4.035102 GGAAAGGGGTGCGAGCCT 62.035 66.667 0.00 0.00 35.71 4.58
6195 7443 3.645268 ATGGAAAGGGGTGCGAGCC 62.645 63.158 0.00 0.00 34.31 4.70
6196 7444 0.393808 TAATGGAAAGGGGTGCGAGC 60.394 55.000 0.00 0.00 0.00 5.03
6197 7445 2.122783 TTAATGGAAAGGGGTGCGAG 57.877 50.000 0.00 0.00 0.00 5.03
6198 7446 2.818751 ATTAATGGAAAGGGGTGCGA 57.181 45.000 0.00 0.00 0.00 5.10
6199 7447 3.885724 AAATTAATGGAAAGGGGTGCG 57.114 42.857 0.00 0.00 0.00 5.34
6200 7448 3.689161 GCAAAATTAATGGAAAGGGGTGC 59.311 43.478 0.00 0.00 0.00 5.01
6201 7449 4.904241 TGCAAAATTAATGGAAAGGGGTG 58.096 39.130 0.00 0.00 0.00 4.61
6202 7450 5.574970 TTGCAAAATTAATGGAAAGGGGT 57.425 34.783 0.00 0.00 0.00 4.95
6203 7451 6.179040 TGATTGCAAAATTAATGGAAAGGGG 58.821 36.000 1.71 0.00 31.75 4.79
6204 7452 7.529158 GTTGATTGCAAAATTAATGGAAAGGG 58.471 34.615 1.71 0.00 35.42 3.95
6205 7453 7.235777 CGTTGATTGCAAAATTAATGGAAAGG 58.764 34.615 1.71 0.00 35.42 3.11
6206 7454 7.117523 TCCGTTGATTGCAAAATTAATGGAAAG 59.882 33.333 18.78 3.09 39.43 2.62
6207 7455 6.931281 TCCGTTGATTGCAAAATTAATGGAAA 59.069 30.769 18.78 5.81 39.43 3.13
6208 7456 6.459066 TCCGTTGATTGCAAAATTAATGGAA 58.541 32.000 18.78 1.52 39.43 3.53
6209 7457 6.030548 TCCGTTGATTGCAAAATTAATGGA 57.969 33.333 17.86 17.86 39.82 3.41
6210 7458 6.718454 TTCCGTTGATTGCAAAATTAATGG 57.282 33.333 1.71 11.07 36.62 3.16
6211 7459 9.687717 GTATTTCCGTTGATTGCAAAATTAATG 57.312 29.630 1.71 2.20 35.42 1.90
6212 7460 9.429359 TGTATTTCCGTTGATTGCAAAATTAAT 57.571 25.926 1.71 0.00 35.42 1.40
6213 7461 8.818141 TGTATTTCCGTTGATTGCAAAATTAA 57.182 26.923 1.71 0.00 35.42 1.40
6214 7462 8.867935 CATGTATTTCCGTTGATTGCAAAATTA 58.132 29.630 1.71 0.00 35.42 1.40
6215 7463 7.148440 CCATGTATTTCCGTTGATTGCAAAATT 60.148 33.333 1.71 0.00 35.42 1.82
6216 7464 6.313411 CCATGTATTTCCGTTGATTGCAAAAT 59.687 34.615 1.71 0.00 35.42 1.82
6217 7465 5.636965 CCATGTATTTCCGTTGATTGCAAAA 59.363 36.000 1.71 0.00 35.42 2.44
6218 7466 5.167121 CCATGTATTTCCGTTGATTGCAAA 58.833 37.500 1.71 0.00 35.42 3.68
6219 7467 4.219507 ACCATGTATTTCCGTTGATTGCAA 59.780 37.500 0.00 0.00 0.00 4.08
6220 7468 3.761218 ACCATGTATTTCCGTTGATTGCA 59.239 39.130 0.00 0.00 0.00 4.08
6221 7469 4.351192 GACCATGTATTTCCGTTGATTGC 58.649 43.478 0.00 0.00 0.00 3.56
6222 7470 4.397730 TGGACCATGTATTTCCGTTGATTG 59.602 41.667 0.00 0.00 31.38 2.67
6223 7471 4.594970 TGGACCATGTATTTCCGTTGATT 58.405 39.130 0.00 0.00 31.38 2.57
6224 7472 4.199310 CTGGACCATGTATTTCCGTTGAT 58.801 43.478 0.00 0.00 31.38 2.57
6225 7473 3.008594 ACTGGACCATGTATTTCCGTTGA 59.991 43.478 0.00 0.00 31.38 3.18
6226 7474 3.343617 ACTGGACCATGTATTTCCGTTG 58.656 45.455 0.00 0.00 31.38 4.10
6227 7475 3.713826 ACTGGACCATGTATTTCCGTT 57.286 42.857 0.00 0.00 31.38 4.44
6228 7476 3.773119 ACTACTGGACCATGTATTTCCGT 59.227 43.478 0.00 0.00 31.38 4.69
6229 7477 4.402056 ACTACTGGACCATGTATTTCCG 57.598 45.455 0.00 0.00 31.38 4.30
6230 7478 5.990668 AGAACTACTGGACCATGTATTTCC 58.009 41.667 19.21 0.00 32.39 3.13
6231 7479 6.879400 AGAGAACTACTGGACCATGTATTTC 58.121 40.000 17.20 17.20 32.25 2.17
6232 7480 6.875972 AGAGAACTACTGGACCATGTATTT 57.124 37.500 0.00 0.93 0.00 1.40
6233 7481 6.551601 CCTAGAGAACTACTGGACCATGTATT 59.448 42.308 0.00 0.00 0.00 1.89
6234 7482 6.071984 CCTAGAGAACTACTGGACCATGTAT 58.928 44.000 0.00 0.00 0.00 2.29
6235 7483 5.044328 ACCTAGAGAACTACTGGACCATGTA 60.044 44.000 0.00 0.00 0.00 2.29
6236 7484 4.264442 ACCTAGAGAACTACTGGACCATGT 60.264 45.833 0.00 0.00 0.00 3.21
6237 7485 4.282496 ACCTAGAGAACTACTGGACCATG 58.718 47.826 0.00 0.00 0.00 3.66
6238 7486 4.611564 ACCTAGAGAACTACTGGACCAT 57.388 45.455 0.00 0.00 0.00 3.55
6239 7487 5.193124 TGATACCTAGAGAACTACTGGACCA 59.807 44.000 0.00 0.00 0.00 4.02
6240 7488 5.692928 TGATACCTAGAGAACTACTGGACC 58.307 45.833 0.00 0.00 0.00 4.46
6241 7489 7.391275 GGTATGATACCTAGAGAACTACTGGAC 59.609 44.444 14.30 0.00 45.52 4.02
6242 7490 7.460071 GGTATGATACCTAGAGAACTACTGGA 58.540 42.308 14.30 0.00 45.52 3.86
6243 7491 7.690952 GGTATGATACCTAGAGAACTACTGG 57.309 44.000 14.30 0.00 45.52 4.00
6258 7506 7.911727 GTGGTCGTTTTATTTTGGGTATGATAC 59.088 37.037 0.00 0.00 0.00 2.24
6259 7507 7.201626 CGTGGTCGTTTTATTTTGGGTATGATA 60.202 37.037 0.00 0.00 0.00 2.15
6260 7508 6.403855 CGTGGTCGTTTTATTTTGGGTATGAT 60.404 38.462 0.00 0.00 0.00 2.45
6261 7509 5.106634 CGTGGTCGTTTTATTTTGGGTATGA 60.107 40.000 0.00 0.00 0.00 2.15
6262 7510 5.090083 CGTGGTCGTTTTATTTTGGGTATG 58.910 41.667 0.00 0.00 0.00 2.39
6263 7511 5.002516 TCGTGGTCGTTTTATTTTGGGTAT 58.997 37.500 0.00 0.00 38.33 2.73
6264 7512 4.384056 TCGTGGTCGTTTTATTTTGGGTA 58.616 39.130 0.00 0.00 38.33 3.69
6265 7513 3.212685 TCGTGGTCGTTTTATTTTGGGT 58.787 40.909 0.00 0.00 38.33 4.51
6266 7514 3.499157 TCTCGTGGTCGTTTTATTTTGGG 59.501 43.478 0.00 0.00 38.33 4.12
6267 7515 4.460505 GTCTCGTGGTCGTTTTATTTTGG 58.539 43.478 0.00 0.00 38.33 3.28
6268 7516 4.460505 GGTCTCGTGGTCGTTTTATTTTG 58.539 43.478 0.00 0.00 38.33 2.44
6269 7517 3.499537 GGGTCTCGTGGTCGTTTTATTTT 59.500 43.478 0.00 0.00 38.33 1.82
6270 7518 3.069289 GGGTCTCGTGGTCGTTTTATTT 58.931 45.455 0.00 0.00 38.33 1.40
6271 7519 2.037511 TGGGTCTCGTGGTCGTTTTATT 59.962 45.455 0.00 0.00 38.33 1.40
6272 7520 1.619827 TGGGTCTCGTGGTCGTTTTAT 59.380 47.619 0.00 0.00 38.33 1.40
6273 7521 1.039068 TGGGTCTCGTGGTCGTTTTA 58.961 50.000 0.00 0.00 38.33 1.52
6274 7522 0.178533 TTGGGTCTCGTGGTCGTTTT 59.821 50.000 0.00 0.00 38.33 2.43
6275 7523 0.178533 TTTGGGTCTCGTGGTCGTTT 59.821 50.000 0.00 0.00 38.33 3.60
6276 7524 0.178533 TTTTGGGTCTCGTGGTCGTT 59.821 50.000 0.00 0.00 38.33 3.85
6277 7525 0.395312 ATTTTGGGTCTCGTGGTCGT 59.605 50.000 0.00 0.00 38.33 4.34
6278 7526 2.373540 TATTTTGGGTCTCGTGGTCG 57.626 50.000 0.00 0.00 38.55 4.79
6279 7527 3.683340 GTCTTATTTTGGGTCTCGTGGTC 59.317 47.826 0.00 0.00 0.00 4.02
6280 7528 3.326880 AGTCTTATTTTGGGTCTCGTGGT 59.673 43.478 0.00 0.00 0.00 4.16
6281 7529 3.684788 CAGTCTTATTTTGGGTCTCGTGG 59.315 47.826 0.00 0.00 0.00 4.94
6282 7530 4.566004 TCAGTCTTATTTTGGGTCTCGTG 58.434 43.478 0.00 0.00 0.00 4.35
6283 7531 4.884668 TCAGTCTTATTTTGGGTCTCGT 57.115 40.909 0.00 0.00 0.00 4.18
6284 7532 5.122396 CCTTTCAGTCTTATTTTGGGTCTCG 59.878 44.000 0.00 0.00 0.00 4.04
6285 7533 5.416013 CCCTTTCAGTCTTATTTTGGGTCTC 59.584 44.000 0.00 0.00 0.00 3.36
6286 7534 5.325239 CCCTTTCAGTCTTATTTTGGGTCT 58.675 41.667 0.00 0.00 0.00 3.85
6287 7535 4.462834 CCCCTTTCAGTCTTATTTTGGGTC 59.537 45.833 0.00 0.00 0.00 4.46
6288 7536 4.107311 TCCCCTTTCAGTCTTATTTTGGGT 59.893 41.667 0.00 0.00 0.00 4.51
6289 7537 4.672899 TCCCCTTTCAGTCTTATTTTGGG 58.327 43.478 0.00 0.00 0.00 4.12
6290 7538 4.706962 CCTCCCCTTTCAGTCTTATTTTGG 59.293 45.833 0.00 0.00 0.00 3.28
6291 7539 5.570320 TCCTCCCCTTTCAGTCTTATTTTG 58.430 41.667 0.00 0.00 0.00 2.44
6292 7540 5.808050 GCTCCTCCCCTTTCAGTCTTATTTT 60.808 44.000 0.00 0.00 0.00 1.82
6293 7541 4.324641 GCTCCTCCCCTTTCAGTCTTATTT 60.325 45.833 0.00 0.00 0.00 1.40
6294 7542 3.201045 GCTCCTCCCCTTTCAGTCTTATT 59.799 47.826 0.00 0.00 0.00 1.40
6295 7543 2.774809 GCTCCTCCCCTTTCAGTCTTAT 59.225 50.000 0.00 0.00 0.00 1.73
6296 7544 2.188817 GCTCCTCCCCTTTCAGTCTTA 58.811 52.381 0.00 0.00 0.00 2.10
6297 7545 0.988063 GCTCCTCCCCTTTCAGTCTT 59.012 55.000 0.00 0.00 0.00 3.01
6298 7546 1.261238 CGCTCCTCCCCTTTCAGTCT 61.261 60.000 0.00 0.00 0.00 3.24
6299 7547 1.219393 CGCTCCTCCCCTTTCAGTC 59.781 63.158 0.00 0.00 0.00 3.51
6300 7548 1.229209 TCGCTCCTCCCCTTTCAGT 60.229 57.895 0.00 0.00 0.00 3.41
6301 7549 1.519719 CTCGCTCCTCCCCTTTCAG 59.480 63.158 0.00 0.00 0.00 3.02
6302 7550 2.660064 GCTCGCTCCTCCCCTTTCA 61.660 63.158 0.00 0.00 0.00 2.69
6303 7551 2.188207 GCTCGCTCCTCCCCTTTC 59.812 66.667 0.00 0.00 0.00 2.62
6304 7552 2.284995 AGCTCGCTCCTCCCCTTT 60.285 61.111 0.00 0.00 0.00 3.11
6305 7553 3.080121 CAGCTCGCTCCTCCCCTT 61.080 66.667 0.00 0.00 0.00 3.95
6308 7556 3.535962 CTCCAGCTCGCTCCTCCC 61.536 72.222 0.00 0.00 0.00 4.30
6309 7557 4.219999 GCTCCAGCTCGCTCCTCC 62.220 72.222 0.00 0.00 38.21 4.30
6310 7558 2.697992 GATGCTCCAGCTCGCTCCTC 62.698 65.000 0.00 0.00 42.66 3.71
6311 7559 2.763292 ATGCTCCAGCTCGCTCCT 60.763 61.111 0.00 0.00 42.66 3.69
6312 7560 2.280052 GATGCTCCAGCTCGCTCC 60.280 66.667 0.00 0.00 42.66 4.70
6313 7561 2.657944 CGATGCTCCAGCTCGCTC 60.658 66.667 0.00 0.00 42.66 5.03
6314 7562 3.143515 TCGATGCTCCAGCTCGCT 61.144 61.111 12.68 0.00 42.66 4.93
6315 7563 2.959071 GTCGATGCTCCAGCTCGC 60.959 66.667 12.68 0.00 42.66 5.03
6316 7564 1.588403 CTGTCGATGCTCCAGCTCG 60.588 63.158 11.76 11.76 42.66 5.03
6317 7565 1.227205 CCTGTCGATGCTCCAGCTC 60.227 63.158 0.00 0.00 42.66 4.09
6318 7566 1.260538 TTCCTGTCGATGCTCCAGCT 61.261 55.000 0.00 0.00 42.66 4.24
6319 7567 0.391661 TTTCCTGTCGATGCTCCAGC 60.392 55.000 0.00 0.00 42.50 4.85
6320 7568 1.363744 GTTTCCTGTCGATGCTCCAG 58.636 55.000 0.00 0.00 0.00 3.86
6321 7569 0.036388 GGTTTCCTGTCGATGCTCCA 60.036 55.000 0.00 0.00 0.00 3.86
6322 7570 0.744771 GGGTTTCCTGTCGATGCTCC 60.745 60.000 0.00 0.00 0.00 4.70
6323 7571 0.036388 TGGGTTTCCTGTCGATGCTC 60.036 55.000 0.00 0.00 0.00 4.26
6324 7572 0.321653 GTGGGTTTCCTGTCGATGCT 60.322 55.000 0.00 0.00 0.00 3.79
6325 7573 1.305930 GGTGGGTTTCCTGTCGATGC 61.306 60.000 0.00 0.00 0.00 3.91
6326 7574 1.019278 CGGTGGGTTTCCTGTCGATG 61.019 60.000 0.00 0.00 0.00 3.84
6327 7575 1.295423 CGGTGGGTTTCCTGTCGAT 59.705 57.895 0.00 0.00 0.00 3.59
6328 7576 2.738480 CGGTGGGTTTCCTGTCGA 59.262 61.111 0.00 0.00 0.00 4.20
6329 7577 3.047877 GCGGTGGGTTTCCTGTCG 61.048 66.667 0.00 0.00 0.00 4.35
6330 7578 1.966451 CTGCGGTGGGTTTCCTGTC 60.966 63.158 0.00 0.00 0.00 3.51
6331 7579 2.113139 CTGCGGTGGGTTTCCTGT 59.887 61.111 0.00 0.00 0.00 4.00
6332 7580 2.672996 CCTGCGGTGGGTTTCCTG 60.673 66.667 0.00 0.00 0.00 3.86
6333 7581 2.852075 TCCTGCGGTGGGTTTCCT 60.852 61.111 0.00 0.00 0.00 3.36
6334 7582 2.359975 CTCCTGCGGTGGGTTTCC 60.360 66.667 0.00 0.00 0.00 3.13
6335 7583 2.198304 ATCCTCCTGCGGTGGGTTTC 62.198 60.000 13.33 0.00 37.01 2.78
6336 7584 2.198304 GATCCTCCTGCGGTGGGTTT 62.198 60.000 13.33 2.74 37.01 3.27
6337 7585 2.610859 ATCCTCCTGCGGTGGGTT 60.611 61.111 13.33 0.00 37.01 4.11
6338 7586 3.083997 GATCCTCCTGCGGTGGGT 61.084 66.667 13.33 8.12 37.01 4.51
6339 7587 3.866582 GGATCCTCCTGCGGTGGG 61.867 72.222 3.84 5.50 37.01 4.61
6363 7611 1.823899 GTCCCATGGCGGTTGATCC 60.824 63.158 6.09 0.00 0.00 3.36
6364 7612 2.180204 CGTCCCATGGCGGTTGATC 61.180 63.158 6.09 0.00 0.00 2.92
6365 7613 2.124736 CGTCCCATGGCGGTTGAT 60.125 61.111 6.09 0.00 0.00 2.57
6366 7614 2.398840 TTTCGTCCCATGGCGGTTGA 62.399 55.000 6.09 0.00 0.00 3.18
6367 7615 1.519751 TTTTCGTCCCATGGCGGTTG 61.520 55.000 6.09 0.00 0.00 3.77
6368 7616 1.228306 TTTTCGTCCCATGGCGGTT 60.228 52.632 6.09 0.00 0.00 4.44
6369 7617 1.969589 GTTTTCGTCCCATGGCGGT 60.970 57.895 6.09 0.00 0.00 5.68
6370 7618 2.696759 GGTTTTCGTCCCATGGCGG 61.697 63.158 6.09 0.00 0.00 6.13
6371 7619 1.674322 AGGTTTTCGTCCCATGGCG 60.674 57.895 6.09 5.74 0.00 5.69
6372 7620 0.608035 TCAGGTTTTCGTCCCATGGC 60.608 55.000 6.09 0.00 0.00 4.40
6373 7621 1.165270 GTCAGGTTTTCGTCCCATGG 58.835 55.000 4.14 4.14 0.00 3.66
6374 7622 0.796312 CGTCAGGTTTTCGTCCCATG 59.204 55.000 0.00 0.00 0.00 3.66
6375 7623 0.682852 TCGTCAGGTTTTCGTCCCAT 59.317 50.000 0.00 0.00 0.00 4.00
6376 7624 0.249573 GTCGTCAGGTTTTCGTCCCA 60.250 55.000 0.00 0.00 0.00 4.37
6377 7625 0.249573 TGTCGTCAGGTTTTCGTCCC 60.250 55.000 0.00 0.00 0.00 4.46
6378 7626 0.857287 GTGTCGTCAGGTTTTCGTCC 59.143 55.000 0.00 0.00 0.00 4.79
6379 7627 0.857287 GGTGTCGTCAGGTTTTCGTC 59.143 55.000 0.00 0.00 0.00 4.20
6380 7628 0.872881 CGGTGTCGTCAGGTTTTCGT 60.873 55.000 0.00 0.00 0.00 3.85
6381 7629 1.850640 CGGTGTCGTCAGGTTTTCG 59.149 57.895 0.00 0.00 0.00 3.46
6392 7640 6.822073 TCATTTCTTTATCATACGGTGTCG 57.178 37.500 0.00 0.00 43.02 4.35
6393 7641 8.365399 TCATCATTTCTTTATCATACGGTGTC 57.635 34.615 0.00 0.00 0.00 3.67
6394 7642 8.908786 ATCATCATTTCTTTATCATACGGTGT 57.091 30.769 0.00 0.00 0.00 4.16
6424 7673 6.502652 TCATCTGTTCATCGCAAAAGAAAAA 58.497 32.000 0.00 0.00 0.00 1.94
6526 7775 1.137404 CACCTGTTGGCTATTGCGC 59.863 57.895 0.00 0.00 40.82 6.09
6527 7776 0.168788 CACACCTGTTGGCTATTGCG 59.831 55.000 0.00 0.00 40.82 4.85
6528 7777 1.068333 CACACACCTGTTGGCTATTGC 60.068 52.381 0.00 0.00 36.63 3.56
6529 7778 2.030893 CACACACACCTGTTGGCTATTG 60.031 50.000 0.00 0.00 36.63 1.90
6530 7779 2.229792 CACACACACCTGTTGGCTATT 58.770 47.619 0.00 0.00 36.63 1.73
6531 7780 1.142870 ACACACACACCTGTTGGCTAT 59.857 47.619 0.00 0.00 36.63 2.97
6532 7781 0.544223 ACACACACACCTGTTGGCTA 59.456 50.000 0.00 0.00 36.63 3.93
6533 7782 1.031571 CACACACACACCTGTTGGCT 61.032 55.000 0.00 0.00 36.63 4.75
6534 7783 1.312371 ACACACACACACCTGTTGGC 61.312 55.000 0.00 0.00 36.63 4.52
6535 7784 0.451383 CACACACACACACCTGTTGG 59.549 55.000 0.00 0.00 39.83 3.77
6536 7785 1.135717 CACACACACACACACCTGTTG 60.136 52.381 0.00 0.00 0.00 3.33
6537 7786 1.164411 CACACACACACACACCTGTT 58.836 50.000 0.00 0.00 0.00 3.16
6538 7787 0.036164 ACACACACACACACACCTGT 59.964 50.000 0.00 0.00 0.00 4.00
6539 7788 0.447406 CACACACACACACACACCTG 59.553 55.000 0.00 0.00 0.00 4.00
6540 7789 0.036164 ACACACACACACACACACCT 59.964 50.000 0.00 0.00 0.00 4.00
6541 7790 0.167908 CACACACACACACACACACC 59.832 55.000 0.00 0.00 0.00 4.16
6542 7791 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
6543 7792 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
6668 7917 7.217200 AGGTAACACCATACTATATTGCTGTG 58.783 38.462 0.00 0.00 41.95 3.66
6669 7918 7.070696 TGAGGTAACACCATACTATATTGCTGT 59.929 37.037 0.00 0.00 41.95 4.40
6670 7919 7.441836 TGAGGTAACACCATACTATATTGCTG 58.558 38.462 0.00 0.00 41.95 4.41
6671 7920 7.612065 TGAGGTAACACCATACTATATTGCT 57.388 36.000 0.00 0.00 41.95 3.91
6672 7921 8.148351 TCTTGAGGTAACACCATACTATATTGC 58.852 37.037 0.00 0.00 41.95 3.56
6684 7933 5.602628 GGATACAGATCTTGAGGTAACACC 58.397 45.833 0.00 0.00 33.53 4.16
6685 7934 5.067413 TCGGATACAGATCTTGAGGTAACAC 59.933 44.000 0.00 0.00 33.09 3.32
6686 7935 5.198207 TCGGATACAGATCTTGAGGTAACA 58.802 41.667 0.00 0.00 33.09 2.41
6687 7936 5.769484 TCGGATACAGATCTTGAGGTAAC 57.231 43.478 0.00 0.00 32.15 2.50
6688 7937 6.605995 TCTTTCGGATACAGATCTTGAGGTAA 59.394 38.462 0.00 0.00 32.15 2.85
6725 7974 1.882623 CCCACTTTCAGTTTCCAGCTC 59.117 52.381 0.00 0.00 0.00 4.09
6747 7996 2.751688 GGTAACTGGGAACGGGCA 59.248 61.111 0.00 0.00 42.76 5.36
6911 8168 0.179078 ACTCGATCGCTACCTCTCGT 60.179 55.000 11.09 0.00 33.10 4.18
6921 8196 2.047679 GTACCATACCACTCGATCGC 57.952 55.000 11.09 0.00 0.00 4.58
6932 8207 2.093869 TCCGTCAAGCAAGGTACCATAC 60.094 50.000 15.94 2.01 0.00 2.39
6933 8208 2.181125 TCCGTCAAGCAAGGTACCATA 58.819 47.619 15.94 0.00 0.00 2.74
6934 8209 0.981183 TCCGTCAAGCAAGGTACCAT 59.019 50.000 15.94 0.00 0.00 3.55
6958 8233 2.365617 GACGAGGATAGATGGCAAGGAA 59.634 50.000 0.00 0.00 0.00 3.36
6994 8269 7.019418 AGTACGTTGTTGTTCTTCTGTTTTTC 58.981 34.615 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.