Multiple sequence alignment - TraesCS3D01G301500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G301500 chr3D 100.000 2666 0 0 1 2666 415718189 415715524 0.000000e+00 4924.0
1 TraesCS3D01G301500 chr3B 93.232 2098 112 15 153 2238 542546924 542544845 0.000000e+00 3061.0
2 TraesCS3D01G301500 chr3A 94.894 1175 51 4 1067 2238 534383154 534384322 0.000000e+00 1829.0
3 TraesCS3D01G301500 chr3A 91.243 354 22 1 310 663 534380491 534380835 8.640000e-130 473.0
4 TraesCS3D01G301500 chr3A 95.254 295 10 1 781 1071 534381002 534381296 5.200000e-127 464.0
5 TraesCS3D01G301500 chr3A 87.636 275 28 3 2236 2509 81480720 81480989 5.540000e-82 315.0
6 TraesCS3D01G301500 chr4D 90.625 288 22 3 2236 2519 498774532 498774818 6.970000e-101 377.0
7 TraesCS3D01G301500 chrUn 90.110 273 24 3 2236 2507 296164953 296164683 4.220000e-93 351.0
8 TraesCS3D01G301500 chrUn 89.744 273 25 3 2236 2507 296175137 296174867 1.960000e-91 346.0
9 TraesCS3D01G301500 chr7D 89.091 275 29 1 2236 2509 169916874 169917148 9.140000e-90 340.0
10 TraesCS3D01G301500 chr7B 89.773 264 25 2 2235 2497 607190897 607190635 1.180000e-88 337.0
11 TraesCS3D01G301500 chr7B 87.912 273 27 6 2236 2505 667195742 667195473 1.540000e-82 316.0
12 TraesCS3D01G301500 chr6B 88.612 281 27 5 2231 2508 120800717 120800439 1.180000e-88 337.0
13 TraesCS3D01G301500 chr6B 100.000 28 0 0 375 402 695906055 695906028 5.000000e-03 52.8
14 TraesCS3D01G301500 chr6B 100.000 28 0 0 375 402 695912470 695912443 5.000000e-03 52.8
15 TraesCS3D01G301500 chr5D 88.519 270 24 4 2240 2507 408322846 408322582 1.190000e-83 320.0
16 TraesCS3D01G301500 chr5B 81.707 82 14 1 246 326 478410934 478411015 1.710000e-07 67.6
17 TraesCS3D01G301500 chr7A 79.798 99 13 4 354 452 485514176 485514085 6.160000e-07 65.8
18 TraesCS3D01G301500 chr2B 97.222 36 1 0 170 205 703626472 703626507 7.970000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G301500 chr3D 415715524 415718189 2665 True 4924 4924 100.000 1 2666 1 chr3D.!!$R1 2665
1 TraesCS3D01G301500 chr3B 542544845 542546924 2079 True 3061 3061 93.232 153 2238 1 chr3B.!!$R1 2085
2 TraesCS3D01G301500 chr3A 534380491 534384322 3831 False 922 1829 93.797 310 2238 3 chr3A.!!$F2 1928

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
66 67 0.031449 GCCTTCGCTCTGGCTAGTAG 59.969 60.0 0.0 0.0 45.26 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1928 3851 0.452784 GCAAAGTCGCAAAGTAGCCG 60.453 55.0 0.0 0.0 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.889112 TCCGCCTACCGCTCCGAT 62.889 66.667 0.00 0.00 35.03 4.18
19 20 4.647615 CCGCCTACCGCTCCGATG 62.648 72.222 0.00 0.00 35.03 3.84
20 21 4.647615 CGCCTACCGCTCCGATGG 62.648 72.222 0.00 0.00 34.21 3.51
21 22 4.301027 GCCTACCGCTCCGATGGG 62.301 72.222 0.00 0.00 0.00 4.00
22 23 4.301027 CCTACCGCTCCGATGGGC 62.301 72.222 0.00 0.00 0.00 5.36
23 24 3.536917 CTACCGCTCCGATGGGCA 61.537 66.667 0.00 0.00 0.00 5.36
24 25 3.506059 CTACCGCTCCGATGGGCAG 62.506 68.421 0.00 0.00 0.00 4.85
27 28 4.147449 CGCTCCGATGGGCAGTGA 62.147 66.667 0.00 0.00 0.00 3.41
28 29 2.507944 GCTCCGATGGGCAGTGAT 59.492 61.111 0.00 0.00 0.00 3.06
29 30 1.890979 GCTCCGATGGGCAGTGATG 60.891 63.158 0.00 0.00 0.00 3.07
30 31 1.825341 CTCCGATGGGCAGTGATGA 59.175 57.895 0.00 0.00 0.00 2.92
31 32 0.249784 CTCCGATGGGCAGTGATGAG 60.250 60.000 0.00 0.00 0.00 2.90
32 33 0.687427 TCCGATGGGCAGTGATGAGA 60.687 55.000 0.00 0.00 0.00 3.27
33 34 0.395686 CCGATGGGCAGTGATGAGAT 59.604 55.000 0.00 0.00 0.00 2.75
34 35 1.509703 CGATGGGCAGTGATGAGATG 58.490 55.000 0.00 0.00 0.00 2.90
35 36 1.876837 CGATGGGCAGTGATGAGATGG 60.877 57.143 0.00 0.00 0.00 3.51
36 37 1.142465 GATGGGCAGTGATGAGATGGT 59.858 52.381 0.00 0.00 0.00 3.55
37 38 0.253894 TGGGCAGTGATGAGATGGTG 59.746 55.000 0.00 0.00 0.00 4.17
38 39 0.543277 GGGCAGTGATGAGATGGTGA 59.457 55.000 0.00 0.00 0.00 4.02
39 40 1.065199 GGGCAGTGATGAGATGGTGAA 60.065 52.381 0.00 0.00 0.00 3.18
40 41 2.422519 GGGCAGTGATGAGATGGTGAAT 60.423 50.000 0.00 0.00 0.00 2.57
41 42 2.877168 GGCAGTGATGAGATGGTGAATC 59.123 50.000 0.00 0.00 35.29 2.52
42 43 3.538591 GCAGTGATGAGATGGTGAATCA 58.461 45.455 0.00 0.00 37.81 2.57
43 44 4.135306 GCAGTGATGAGATGGTGAATCAT 58.865 43.478 0.00 0.00 37.81 2.45
44 45 4.023963 GCAGTGATGAGATGGTGAATCATG 60.024 45.833 0.00 0.00 37.81 3.07
45 46 4.515567 CAGTGATGAGATGGTGAATCATGG 59.484 45.833 0.00 0.00 37.81 3.66
46 47 4.165565 AGTGATGAGATGGTGAATCATGGT 59.834 41.667 0.00 0.00 37.81 3.55
47 48 4.275196 GTGATGAGATGGTGAATCATGGTG 59.725 45.833 0.00 0.00 37.81 4.17
48 49 2.646930 TGAGATGGTGAATCATGGTGC 58.353 47.619 0.00 0.00 37.81 5.01
49 50 1.952296 GAGATGGTGAATCATGGTGCC 59.048 52.381 0.00 0.00 37.81 5.01
50 51 1.567649 AGATGGTGAATCATGGTGCCT 59.432 47.619 0.00 0.00 37.81 4.75
51 52 2.024655 AGATGGTGAATCATGGTGCCTT 60.025 45.455 0.00 0.00 37.81 4.35
52 53 1.838112 TGGTGAATCATGGTGCCTTC 58.162 50.000 0.00 0.00 0.00 3.46
53 54 0.734889 GGTGAATCATGGTGCCTTCG 59.265 55.000 0.00 0.00 0.00 3.79
54 55 0.099436 GTGAATCATGGTGCCTTCGC 59.901 55.000 0.00 0.00 0.00 4.70
55 56 0.035152 TGAATCATGGTGCCTTCGCT 60.035 50.000 0.00 0.00 35.36 4.93
56 57 0.659957 GAATCATGGTGCCTTCGCTC 59.340 55.000 0.00 0.00 35.36 5.03
57 58 0.254178 AATCATGGTGCCTTCGCTCT 59.746 50.000 0.00 0.00 35.36 4.09
58 59 0.463295 ATCATGGTGCCTTCGCTCTG 60.463 55.000 0.00 0.00 35.36 3.35
59 60 2.110967 CATGGTGCCTTCGCTCTGG 61.111 63.158 0.00 0.00 35.36 3.86
64 65 2.896443 GCCTTCGCTCTGGCTAGT 59.104 61.111 0.00 0.00 45.26 2.57
65 66 2.116383 GCCTTCGCTCTGGCTAGTA 58.884 57.895 0.00 0.00 45.26 1.82
66 67 0.031449 GCCTTCGCTCTGGCTAGTAG 59.969 60.000 0.00 0.00 45.26 2.57
67 68 1.394618 CCTTCGCTCTGGCTAGTAGT 58.605 55.000 0.00 0.00 36.09 2.73
68 69 1.751924 CCTTCGCTCTGGCTAGTAGTT 59.248 52.381 0.00 0.00 36.09 2.24
69 70 2.166664 CCTTCGCTCTGGCTAGTAGTTT 59.833 50.000 0.00 0.00 36.09 2.66
70 71 3.368531 CCTTCGCTCTGGCTAGTAGTTTT 60.369 47.826 0.00 0.00 36.09 2.43
71 72 3.232213 TCGCTCTGGCTAGTAGTTTTG 57.768 47.619 0.00 0.00 36.09 2.44
72 73 2.823747 TCGCTCTGGCTAGTAGTTTTGA 59.176 45.455 0.00 0.00 36.09 2.69
73 74 3.447586 TCGCTCTGGCTAGTAGTTTTGAT 59.552 43.478 0.00 0.00 36.09 2.57
74 75 4.643334 TCGCTCTGGCTAGTAGTTTTGATA 59.357 41.667 0.00 0.00 36.09 2.15
75 76 5.126545 TCGCTCTGGCTAGTAGTTTTGATAA 59.873 40.000 0.00 0.00 36.09 1.75
76 77 5.460419 CGCTCTGGCTAGTAGTTTTGATAAG 59.540 44.000 0.00 0.00 36.09 1.73
77 78 6.342111 GCTCTGGCTAGTAGTTTTGATAAGT 58.658 40.000 0.00 0.00 35.22 2.24
78 79 6.819146 GCTCTGGCTAGTAGTTTTGATAAGTT 59.181 38.462 0.00 0.00 35.22 2.66
79 80 7.334671 GCTCTGGCTAGTAGTTTTGATAAGTTT 59.665 37.037 0.00 0.00 35.22 2.66
80 81 9.220767 CTCTGGCTAGTAGTTTTGATAAGTTTT 57.779 33.333 0.00 0.00 0.00 2.43
81 82 9.569122 TCTGGCTAGTAGTTTTGATAAGTTTTT 57.431 29.630 0.00 0.00 0.00 1.94
104 105 2.762535 TTAGTCCTTGCAGGTACAGC 57.237 50.000 0.00 0.00 42.84 4.40
110 111 2.656646 TGCAGGTACAGCACTCGG 59.343 61.111 8.01 0.00 45.66 4.63
111 112 2.125512 GCAGGTACAGCACTCGGG 60.126 66.667 4.83 0.00 41.82 5.14
112 113 2.646175 GCAGGTACAGCACTCGGGA 61.646 63.158 0.00 0.00 41.82 5.14
113 114 1.513158 CAGGTACAGCACTCGGGAG 59.487 63.158 0.00 0.00 0.00 4.30
114 115 1.682684 AGGTACAGCACTCGGGAGG 60.683 63.158 0.00 0.00 0.00 4.30
115 116 1.681327 GGTACAGCACTCGGGAGGA 60.681 63.158 0.00 0.00 0.00 3.71
116 117 1.043673 GGTACAGCACTCGGGAGGAT 61.044 60.000 0.00 0.00 0.00 3.24
117 118 0.386113 GTACAGCACTCGGGAGGATC 59.614 60.000 0.00 0.00 0.00 3.36
118 119 0.033503 TACAGCACTCGGGAGGATCA 60.034 55.000 0.00 0.00 36.25 2.92
119 120 1.142748 CAGCACTCGGGAGGATCAC 59.857 63.158 0.00 0.00 36.25 3.06
126 127 2.990479 GGGAGGATCACGGTGCTT 59.010 61.111 2.51 0.00 36.25 3.91
127 128 1.153349 GGGAGGATCACGGTGCTTC 60.153 63.158 2.51 2.95 36.25 3.86
128 129 1.617947 GGGAGGATCACGGTGCTTCT 61.618 60.000 2.51 0.00 36.25 2.85
129 130 0.250513 GGAGGATCACGGTGCTTCTT 59.749 55.000 2.51 0.00 36.25 2.52
130 131 1.646189 GAGGATCACGGTGCTTCTTC 58.354 55.000 2.51 5.41 33.17 2.87
131 132 1.205893 GAGGATCACGGTGCTTCTTCT 59.794 52.381 2.51 0.00 33.17 2.85
132 133 1.625818 AGGATCACGGTGCTTCTTCTT 59.374 47.619 2.51 0.00 0.00 2.52
133 134 2.003301 GGATCACGGTGCTTCTTCTTC 58.997 52.381 2.51 0.00 0.00 2.87
134 135 1.656095 GATCACGGTGCTTCTTCTTCG 59.344 52.381 2.51 0.00 0.00 3.79
135 136 0.671796 TCACGGTGCTTCTTCTTCGA 59.328 50.000 2.51 0.00 0.00 3.71
136 137 1.063806 CACGGTGCTTCTTCTTCGAG 58.936 55.000 0.00 0.00 0.00 4.04
137 138 0.674534 ACGGTGCTTCTTCTTCGAGT 59.325 50.000 0.00 0.00 0.00 4.18
138 139 1.068741 ACGGTGCTTCTTCTTCGAGTT 59.931 47.619 0.00 0.00 0.00 3.01
139 140 2.135933 CGGTGCTTCTTCTTCGAGTTT 58.864 47.619 0.00 0.00 0.00 2.66
140 141 3.243636 ACGGTGCTTCTTCTTCGAGTTTA 60.244 43.478 0.00 0.00 0.00 2.01
141 142 3.927142 CGGTGCTTCTTCTTCGAGTTTAT 59.073 43.478 0.00 0.00 0.00 1.40
142 143 4.031878 CGGTGCTTCTTCTTCGAGTTTATC 59.968 45.833 0.00 0.00 0.00 1.75
143 144 5.172205 GGTGCTTCTTCTTCGAGTTTATCT 58.828 41.667 0.00 0.00 0.00 1.98
144 145 5.639931 GGTGCTTCTTCTTCGAGTTTATCTT 59.360 40.000 0.00 0.00 0.00 2.40
145 146 6.183360 GGTGCTTCTTCTTCGAGTTTATCTTC 60.183 42.308 0.00 0.00 0.00 2.87
146 147 5.869888 TGCTTCTTCTTCGAGTTTATCTTCC 59.130 40.000 0.00 0.00 0.00 3.46
147 148 5.004916 GCTTCTTCTTCGAGTTTATCTTCCG 59.995 44.000 0.00 0.00 0.00 4.30
148 149 4.995124 TCTTCTTCGAGTTTATCTTCCGG 58.005 43.478 0.00 0.00 0.00 5.14
149 150 3.795623 TCTTCGAGTTTATCTTCCGGG 57.204 47.619 0.00 0.00 0.00 5.73
150 151 2.429610 TCTTCGAGTTTATCTTCCGGGG 59.570 50.000 0.00 0.00 0.00 5.73
151 152 2.148446 TCGAGTTTATCTTCCGGGGA 57.852 50.000 0.00 0.16 0.00 4.81
165 166 2.776659 GGGGACGTATGTTTCTGCC 58.223 57.895 0.00 0.00 0.00 4.85
172 173 2.288579 ACGTATGTTTCTGCCGTCTTCA 60.289 45.455 0.00 0.00 0.00 3.02
177 178 0.690192 TTTCTGCCGTCTTCATGGGA 59.310 50.000 0.00 0.00 0.00 4.37
187 188 1.191535 CTTCATGGGACGGTGAGGTA 58.808 55.000 0.00 0.00 0.00 3.08
191 192 0.042131 ATGGGACGGTGAGGTAAGGA 59.958 55.000 0.00 0.00 0.00 3.36
204 205 4.466370 TGAGGTAAGGATTTCTCGTCATGT 59.534 41.667 0.00 0.00 32.33 3.21
205 206 5.012328 AGGTAAGGATTTCTCGTCATGTC 57.988 43.478 0.00 0.00 0.00 3.06
210 211 1.002366 ATTTCTCGTCATGTCTGCGC 58.998 50.000 0.00 0.00 0.00 6.09
212 213 3.250323 CTCGTCATGTCTGCGCGG 61.250 66.667 10.86 10.86 0.00 6.46
229 230 2.332654 GGCCGCGAGATTTGGTGTT 61.333 57.895 8.23 0.00 0.00 3.32
230 231 1.022451 GGCCGCGAGATTTGGTGTTA 61.022 55.000 8.23 0.00 0.00 2.41
231 232 0.373716 GCCGCGAGATTTGGTGTTAG 59.626 55.000 8.23 0.00 0.00 2.34
232 233 1.722011 CCGCGAGATTTGGTGTTAGT 58.278 50.000 8.23 0.00 0.00 2.24
233 234 2.073816 CCGCGAGATTTGGTGTTAGTT 58.926 47.619 8.23 0.00 0.00 2.24
234 235 3.255725 CCGCGAGATTTGGTGTTAGTTA 58.744 45.455 8.23 0.00 0.00 2.24
235 236 3.869246 CCGCGAGATTTGGTGTTAGTTAT 59.131 43.478 8.23 0.00 0.00 1.89
238 239 6.311723 CGCGAGATTTGGTGTTAGTTATTTT 58.688 36.000 0.00 0.00 0.00 1.82
270 271 0.892755 AGGTTCAATGGCGACGACTA 59.107 50.000 0.65 0.00 0.00 2.59
272 273 0.638746 GTTCAATGGCGACGACTACG 59.361 55.000 0.65 0.00 45.75 3.51
273 274 0.457166 TTCAATGGCGACGACTACGG 60.457 55.000 0.65 0.00 44.46 4.02
278 279 2.350537 GCGACGACTACGGCTACG 60.351 66.667 0.00 0.00 46.46 3.51
279 280 2.322422 CGACGACTACGGCTACGG 59.678 66.667 0.00 0.00 46.46 4.02
281 282 1.815421 GACGACTACGGCTACGGGA 60.815 63.158 0.00 0.00 45.04 5.14
323 325 2.664085 GCACGAAGACTTTCTAGCTGTC 59.336 50.000 0.00 0.00 31.85 3.51
329 331 5.392767 AAGACTTTCTAGCTGTCATCGAA 57.607 39.130 0.00 0.00 33.56 3.71
345 347 1.623311 TCGAAGGCTTGTTCTGATGGA 59.377 47.619 3.46 0.00 0.00 3.41
589 592 1.154131 CACGCTCCACTCGAGTCTG 60.154 63.158 16.96 10.26 41.10 3.51
715 755 1.418342 CGTCGCACGGATTTGGGTAG 61.418 60.000 1.40 0.00 38.08 3.18
763 810 1.118965 TGTGTGGGCTCCTCTTCGAA 61.119 55.000 0.00 0.00 0.00 3.71
975 1032 1.452108 GTTCTGATTGGCTCCCCCG 60.452 63.158 0.00 0.00 35.87 5.73
1379 3298 2.734948 TACCCGCACCCGAACCAAAG 62.735 60.000 0.00 0.00 36.29 2.77
1557 3476 0.632835 ATGACTTCCATGGGTGGCAT 59.367 50.000 17.02 17.02 45.63 4.40
1600 3522 3.536917 CGCAGGGCCAGGTCGATA 61.537 66.667 6.18 0.00 0.00 2.92
1714 3636 4.300803 GTGTGCTTGCATTTCAATCTGAA 58.699 39.130 0.00 0.00 34.03 3.02
1729 3651 5.069119 TCAATCTGAATGCATCGTAGGTAGT 59.931 40.000 0.00 0.00 0.00 2.73
1747 3670 4.385310 GGTAGTTGAGCTCCCATGGTTATT 60.385 45.833 12.15 0.00 0.00 1.40
1848 3771 4.397103 TCCAGTGAATTTGATCTGTGCATC 59.603 41.667 0.00 0.00 0.00 3.91
1907 3830 4.460731 TCACCATCCATATTTTCGTTTGCA 59.539 37.500 0.00 0.00 0.00 4.08
1928 3851 0.615331 TCTTGACTGGGTGATGGCTC 59.385 55.000 0.00 0.00 0.00 4.70
1929 3852 0.742281 CTTGACTGGGTGATGGCTCG 60.742 60.000 0.00 0.00 0.00 5.03
1940 3863 1.766143 GATGGCTCGGCTACTTTGCG 61.766 60.000 0.00 0.00 0.00 4.85
1989 3912 2.092753 TCCTATGCTCCTGGCTGAAAAG 60.093 50.000 0.00 0.00 42.39 2.27
2080 4005 4.083590 GCATTCTCAGACAGAAGTTTCCAC 60.084 45.833 0.00 0.00 44.71 4.02
2082 4007 4.060038 TCTCAGACAGAAGTTTCCACAC 57.940 45.455 0.00 0.00 0.00 3.82
2239 4164 9.249457 CTAGAAACCTTTTCAGATTTTTGAACC 57.751 33.333 1.72 0.00 36.84 3.62
2240 4165 7.619965 AGAAACCTTTTCAGATTTTTGAACCA 58.380 30.769 1.72 0.00 36.84 3.67
2241 4166 8.100164 AGAAACCTTTTCAGATTTTTGAACCAA 58.900 29.630 1.72 0.00 36.84 3.67
2242 4167 7.609760 AACCTTTTCAGATTTTTGAACCAAC 57.390 32.000 0.00 0.00 36.84 3.77
2243 4168 6.112734 ACCTTTTCAGATTTTTGAACCAACC 58.887 36.000 0.00 0.00 36.84 3.77
2244 4169 6.070251 ACCTTTTCAGATTTTTGAACCAACCT 60.070 34.615 0.00 0.00 36.84 3.50
2245 4170 6.479990 CCTTTTCAGATTTTTGAACCAACCTC 59.520 38.462 0.00 0.00 36.84 3.85
2246 4171 6.790232 TTTCAGATTTTTGAACCAACCTCT 57.210 33.333 0.00 0.00 36.84 3.69
2247 4172 5.772825 TCAGATTTTTGAACCAACCTCTG 57.227 39.130 0.00 0.00 30.96 3.35
2260 4185 3.721087 AACCTCTGGTTGGATGGTTAG 57.279 47.619 0.71 0.00 45.07 2.34
2261 4186 2.915869 ACCTCTGGTTGGATGGTTAGA 58.084 47.619 0.00 0.00 27.29 2.10
2262 4187 2.840651 ACCTCTGGTTGGATGGTTAGAG 59.159 50.000 0.00 0.00 27.29 2.43
2263 4188 2.171448 CCTCTGGTTGGATGGTTAGAGG 59.829 54.545 0.00 0.00 43.57 3.69
2264 4189 2.171448 CTCTGGTTGGATGGTTAGAGGG 59.829 54.545 0.00 0.00 0.00 4.30
2265 4190 2.196595 CTGGTTGGATGGTTAGAGGGA 58.803 52.381 0.00 0.00 0.00 4.20
2266 4191 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
2268 4193 2.092914 GGTTGGATGGTTAGAGGGACTG 60.093 54.545 0.00 0.00 41.55 3.51
2269 4194 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
2270 4195 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
2271 4196 1.486726 GGATGGTTAGAGGGACTGTGG 59.513 57.143 0.00 0.00 41.55 4.17
2272 4197 2.188817 GATGGTTAGAGGGACTGTGGT 58.811 52.381 0.00 0.00 41.55 4.16
2273 4198 3.371965 GATGGTTAGAGGGACTGTGGTA 58.628 50.000 0.00 0.00 41.55 3.25
2274 4199 3.484953 TGGTTAGAGGGACTGTGGTAT 57.515 47.619 0.00 0.00 41.55 2.73
2275 4200 3.371965 TGGTTAGAGGGACTGTGGTATC 58.628 50.000 0.00 0.00 41.55 2.24
2276 4201 2.699321 GGTTAGAGGGACTGTGGTATCC 59.301 54.545 0.00 0.00 41.55 2.59
2281 4206 1.527370 GGACTGTGGTATCCCCAGC 59.473 63.158 0.00 0.00 46.45 4.85
2282 4207 1.527370 GACTGTGGTATCCCCAGCC 59.473 63.158 0.00 0.00 46.45 4.85
2283 4208 1.984288 GACTGTGGTATCCCCAGCCC 61.984 65.000 0.00 0.00 46.45 5.19
2284 4209 2.000701 CTGTGGTATCCCCAGCCCA 61.001 63.158 0.00 0.00 46.45 5.36
2285 4210 2.270874 CTGTGGTATCCCCAGCCCAC 62.271 65.000 0.00 0.00 46.45 4.61
2286 4211 2.694616 TGGTATCCCCAGCCCACC 60.695 66.667 0.00 0.00 38.72 4.61
2287 4212 2.694616 GGTATCCCCAGCCCACCA 60.695 66.667 0.00 0.00 0.00 4.17
2288 4213 2.313427 GGTATCCCCAGCCCACCAA 61.313 63.158 0.00 0.00 0.00 3.67
2289 4214 1.227383 GTATCCCCAGCCCACCAAG 59.773 63.158 0.00 0.00 0.00 3.61
2290 4215 2.006415 TATCCCCAGCCCACCAAGG 61.006 63.158 0.00 0.00 37.03 3.61
2291 4216 2.798760 TATCCCCAGCCCACCAAGGT 62.799 60.000 0.00 0.00 34.66 3.50
2292 4217 3.914713 CCCCAGCCCACCAAGGTT 61.915 66.667 0.00 0.00 34.66 3.50
2293 4218 2.283173 CCCAGCCCACCAAGGTTC 60.283 66.667 0.00 0.00 34.66 3.62
2294 4219 2.520458 CCAGCCCACCAAGGTTCA 59.480 61.111 0.00 0.00 34.66 3.18
2295 4220 1.152567 CCAGCCCACCAAGGTTCAA 60.153 57.895 0.00 0.00 34.66 2.69
2296 4221 0.758685 CCAGCCCACCAAGGTTCAAA 60.759 55.000 0.00 0.00 34.66 2.69
2297 4222 1.341080 CAGCCCACCAAGGTTCAAAT 58.659 50.000 0.00 0.00 34.66 2.32
2298 4223 1.273327 CAGCCCACCAAGGTTCAAATC 59.727 52.381 0.00 0.00 34.66 2.17
2299 4224 0.608130 GCCCACCAAGGTTCAAATCC 59.392 55.000 0.00 0.00 34.66 3.01
2300 4225 1.827245 GCCCACCAAGGTTCAAATCCT 60.827 52.381 0.00 0.00 36.81 3.24
2301 4226 1.895131 CCCACCAAGGTTCAAATCCTG 59.105 52.381 0.00 0.00 35.27 3.86
2302 4227 1.895131 CCACCAAGGTTCAAATCCTGG 59.105 52.381 0.00 0.00 35.27 4.45
2303 4228 2.597455 CACCAAGGTTCAAATCCTGGT 58.403 47.619 0.00 0.00 37.14 4.00
2304 4229 2.297033 CACCAAGGTTCAAATCCTGGTG 59.703 50.000 8.91 8.91 42.07 4.17
2305 4230 1.273327 CCAAGGTTCAAATCCTGGTGC 59.727 52.381 0.00 0.00 35.27 5.01
2306 4231 2.242043 CAAGGTTCAAATCCTGGTGCT 58.758 47.619 0.00 0.00 35.27 4.40
2307 4232 2.206576 AGGTTCAAATCCTGGTGCTC 57.793 50.000 0.00 0.00 33.62 4.26
2308 4233 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
2309 4234 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
2310 4235 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
2311 4236 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
2312 4237 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
2313 4238 1.203052 CAAATCCTGGTGCTCGCATTT 59.797 47.619 0.00 0.00 0.00 2.32
2314 4239 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
2315 4240 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
2316 4241 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
2317 4242 2.288666 TCCTGGTGCTCGCATTTATTC 58.711 47.619 0.00 0.00 0.00 1.75
2318 4243 1.334869 CCTGGTGCTCGCATTTATTCC 59.665 52.381 0.00 0.00 0.00 3.01
2319 4244 2.292267 CTGGTGCTCGCATTTATTCCT 58.708 47.619 0.00 0.00 0.00 3.36
2320 4245 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
2321 4246 1.334869 GGTGCTCGCATTTATTCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
2322 4247 2.288666 GTGCTCGCATTTATTCCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
2323 4248 2.880890 GTGCTCGCATTTATTCCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
2324 4249 3.316308 GTGCTCGCATTTATTCCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
2325 4250 3.953612 TGCTCGCATTTATTCCTGGATTT 59.046 39.130 0.00 0.00 0.00 2.17
2326 4251 5.008613 GTGCTCGCATTTATTCCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
2327 4252 5.769662 TGCTCGCATTTATTCCTGGATTTAT 59.230 36.000 0.00 0.00 0.00 1.40
2328 4253 6.265196 TGCTCGCATTTATTCCTGGATTTATT 59.735 34.615 0.00 0.00 0.00 1.40
2329 4254 7.147976 GCTCGCATTTATTCCTGGATTTATTT 58.852 34.615 0.00 0.00 0.00 1.40
2330 4255 7.327032 GCTCGCATTTATTCCTGGATTTATTTC 59.673 37.037 0.00 0.00 0.00 2.17
2331 4256 8.231692 TCGCATTTATTCCTGGATTTATTTCA 57.768 30.769 0.00 0.00 0.00 2.69
2332 4257 8.352201 TCGCATTTATTCCTGGATTTATTTCAG 58.648 33.333 0.00 0.00 0.00 3.02
2333 4258 7.596248 CGCATTTATTCCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 46.91 3.86
2342 4267 6.469782 TGGATTTATTTCAGGATTTCCAGC 57.530 37.500 0.00 0.00 38.89 4.85
2343 4268 5.067674 TGGATTTATTTCAGGATTTCCAGCG 59.932 40.000 0.00 0.00 38.89 5.18
2344 4269 5.299279 GGATTTATTTCAGGATTTCCAGCGA 59.701 40.000 0.00 0.00 38.89 4.93
2345 4270 6.015940 GGATTTATTTCAGGATTTCCAGCGAT 60.016 38.462 0.00 0.00 38.89 4.58
2346 4271 6.377327 TTTATTTCAGGATTTCCAGCGATC 57.623 37.500 0.00 0.00 38.89 3.69
2347 4272 2.332063 TTCAGGATTTCCAGCGATCC 57.668 50.000 0.00 0.00 41.75 3.36
2348 4273 0.104855 TCAGGATTTCCAGCGATCCG 59.895 55.000 0.00 0.00 45.21 4.18
2363 4288 2.989639 CCGCATTCAGTGGGAGGA 59.010 61.111 0.00 0.00 44.45 3.71
2364 4289 1.153289 CCGCATTCAGTGGGAGGAG 60.153 63.158 0.00 0.00 44.45 3.69
2365 4290 1.617018 CCGCATTCAGTGGGAGGAGA 61.617 60.000 0.00 0.00 44.45 3.71
2366 4291 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
2367 4292 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
2368 4293 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
2369 4294 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
2370 4295 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
2397 4322 6.908870 TCGATGACGAAATTTCAAGATGAT 57.091 33.333 17.99 0.43 45.74 2.45
2399 4324 8.593492 TCGATGACGAAATTTCAAGATGATAT 57.407 30.769 17.99 1.24 45.74 1.63
2400 4325 8.490355 TCGATGACGAAATTTCAAGATGATATG 58.510 33.333 17.99 0.54 45.74 1.78
2401 4326 7.267811 CGATGACGAAATTTCAAGATGATATGC 59.732 37.037 17.99 0.00 42.66 3.14
2402 4327 6.728200 TGACGAAATTTCAAGATGATATGCC 58.272 36.000 17.99 0.00 0.00 4.40
2403 4328 5.751680 ACGAAATTTCAAGATGATATGCCG 58.248 37.500 17.99 2.23 0.00 5.69
2404 4329 5.149273 CGAAATTTCAAGATGATATGCCGG 58.851 41.667 17.99 0.00 0.00 6.13
2405 4330 4.510038 AATTTCAAGATGATATGCCGGC 57.490 40.909 22.73 22.73 0.00 6.13
2406 4331 2.936919 TTCAAGATGATATGCCGGCT 57.063 45.000 29.70 15.76 0.00 5.52
2407 4332 2.462456 TCAAGATGATATGCCGGCTC 57.538 50.000 29.70 17.89 0.00 4.70
2408 4333 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
2409 4334 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
2410 4335 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
2411 4336 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
2412 4337 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
2413 4338 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
2414 4339 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
2415 4340 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
2416 4341 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
2417 4342 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
2418 4343 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
2419 4344 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
2420 4345 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
2421 4346 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
2422 4347 0.321996 GGCTCAGTCTTTCGGAGGTT 59.678 55.000 0.00 0.00 38.48 3.50
2423 4348 1.673329 GGCTCAGTCTTTCGGAGGTTC 60.673 57.143 0.00 0.00 38.48 3.62
2424 4349 1.273886 GCTCAGTCTTTCGGAGGTTCT 59.726 52.381 0.00 0.00 38.48 3.01
2425 4350 2.672760 GCTCAGTCTTTCGGAGGTTCTC 60.673 54.545 0.00 0.00 38.48 2.87
2426 4351 2.558795 CTCAGTCTTTCGGAGGTTCTCA 59.441 50.000 0.00 0.00 35.32 3.27
2427 4352 3.165875 TCAGTCTTTCGGAGGTTCTCAT 58.834 45.455 0.00 0.00 31.08 2.90
2428 4353 4.341487 TCAGTCTTTCGGAGGTTCTCATA 58.659 43.478 0.00 0.00 31.08 2.15
2429 4354 4.399618 TCAGTCTTTCGGAGGTTCTCATAG 59.600 45.833 0.00 0.00 31.08 2.23
2430 4355 3.702045 AGTCTTTCGGAGGTTCTCATAGG 59.298 47.826 0.00 0.00 31.08 2.57
2431 4356 3.031736 TCTTTCGGAGGTTCTCATAGGG 58.968 50.000 0.00 0.00 31.08 3.53
2432 4357 1.789523 TTCGGAGGTTCTCATAGGGG 58.210 55.000 0.00 0.00 31.08 4.79
2433 4358 0.635009 TCGGAGGTTCTCATAGGGGT 59.365 55.000 0.00 0.00 31.08 4.95
2434 4359 1.854939 TCGGAGGTTCTCATAGGGGTA 59.145 52.381 0.00 0.00 31.08 3.69
2435 4360 2.158505 TCGGAGGTTCTCATAGGGGTAG 60.159 54.545 0.00 0.00 31.08 3.18
2436 4361 2.158505 CGGAGGTTCTCATAGGGGTAGA 60.159 54.545 0.00 0.00 31.08 2.59
2437 4362 3.502356 GGAGGTTCTCATAGGGGTAGAG 58.498 54.545 0.00 0.00 31.08 2.43
2438 4363 3.117054 GGAGGTTCTCATAGGGGTAGAGT 60.117 52.174 0.00 0.00 31.08 3.24
2439 4364 3.892588 GAGGTTCTCATAGGGGTAGAGTG 59.107 52.174 0.00 0.00 0.00 3.51
2440 4365 3.272551 AGGTTCTCATAGGGGTAGAGTGT 59.727 47.826 0.00 0.00 0.00 3.55
2441 4366 3.385111 GGTTCTCATAGGGGTAGAGTGTG 59.615 52.174 0.00 0.00 0.00 3.82
2442 4367 2.667470 TCTCATAGGGGTAGAGTGTGC 58.333 52.381 0.00 0.00 0.00 4.57
2443 4368 2.024369 TCTCATAGGGGTAGAGTGTGCA 60.024 50.000 0.00 0.00 0.00 4.57
2444 4369 2.968574 CTCATAGGGGTAGAGTGTGCAT 59.031 50.000 0.00 0.00 0.00 3.96
2445 4370 2.700371 TCATAGGGGTAGAGTGTGCATG 59.300 50.000 0.00 0.00 0.00 4.06
2446 4371 2.247699 TAGGGGTAGAGTGTGCATGT 57.752 50.000 0.00 0.00 0.00 3.21
2447 4372 0.615331 AGGGGTAGAGTGTGCATGTG 59.385 55.000 0.00 0.00 0.00 3.21
2448 4373 0.324943 GGGGTAGAGTGTGCATGTGT 59.675 55.000 0.00 0.00 0.00 3.72
2449 4374 1.442769 GGGTAGAGTGTGCATGTGTG 58.557 55.000 0.00 0.00 0.00 3.82
2460 4385 2.178474 GCATGTGTGCGTTCATAAGG 57.822 50.000 0.00 0.00 42.28 2.69
2461 4386 1.202177 GCATGTGTGCGTTCATAAGGG 60.202 52.381 0.00 0.00 42.28 3.95
2462 4387 2.083774 CATGTGTGCGTTCATAAGGGT 58.916 47.619 0.00 0.00 0.00 4.34
2463 4388 1.518325 TGTGTGCGTTCATAAGGGTG 58.482 50.000 0.00 0.00 0.00 4.61
2464 4389 1.070914 TGTGTGCGTTCATAAGGGTGA 59.929 47.619 0.00 0.00 0.00 4.02
2465 4390 1.732259 GTGTGCGTTCATAAGGGTGAG 59.268 52.381 0.00 0.00 0.00 3.51
2466 4391 1.346395 TGTGCGTTCATAAGGGTGAGT 59.654 47.619 0.00 0.00 0.00 3.41
2467 4392 1.732259 GTGCGTTCATAAGGGTGAGTG 59.268 52.381 0.00 0.00 0.00 3.51
2468 4393 1.346395 TGCGTTCATAAGGGTGAGTGT 59.654 47.619 0.00 0.00 0.00 3.55
2469 4394 2.563620 TGCGTTCATAAGGGTGAGTGTA 59.436 45.455 0.00 0.00 0.00 2.90
2470 4395 3.196901 TGCGTTCATAAGGGTGAGTGTAT 59.803 43.478 0.00 0.00 0.00 2.29
2471 4396 3.555956 GCGTTCATAAGGGTGAGTGTATG 59.444 47.826 0.00 0.00 0.00 2.39
2472 4397 3.555956 CGTTCATAAGGGTGAGTGTATGC 59.444 47.826 0.00 0.00 0.00 3.14
2473 4398 3.452755 TCATAAGGGTGAGTGTATGCG 57.547 47.619 0.00 0.00 0.00 4.73
2474 4399 1.867233 CATAAGGGTGAGTGTATGCGC 59.133 52.381 0.00 0.00 0.00 6.09
2475 4400 0.179121 TAAGGGTGAGTGTATGCGCG 60.179 55.000 0.00 0.00 0.00 6.86
2476 4401 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
2477 4402 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
2478 4403 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
2479 4404 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
2480 4405 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
2481 4406 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
2482 4407 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
2483 4408 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
2484 4409 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
2485 4410 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
2486 4411 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
2489 4414 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
2490 4415 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
2491 4416 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
2492 4417 0.111089 GCGTGTATATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01
2493 4418 0.159554 CGTGTATATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85
2494 4419 1.209128 GTGTATATGAGCGCTTGCGT 58.791 50.000 13.26 3.24 45.69 5.24
2495 4420 1.190323 GTGTATATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
2496 4421 1.067060 TGTATATGAGCGCTTGCGTCT 59.933 47.619 13.26 13.17 45.69 4.18
2497 4422 1.453524 GTATATGAGCGCTTGCGTCTG 59.546 52.381 13.26 0.00 45.69 3.51
2498 4423 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41
2499 4424 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
2500 4425 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
2501 4426 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
2502 4427 0.179171 GAGCGCTTGCGTCTGTACTA 60.179 55.000 13.26 0.00 45.69 1.82
2503 4428 0.456221 AGCGCTTGCGTCTGTACTAT 59.544 50.000 16.38 0.00 45.69 2.12
2504 4429 0.572590 GCGCTTGCGTCTGTACTATG 59.427 55.000 16.38 0.00 0.00 2.23
2505 4430 1.909376 CGCTTGCGTCTGTACTATGT 58.091 50.000 6.86 0.00 0.00 2.29
2506 4431 2.259618 CGCTTGCGTCTGTACTATGTT 58.740 47.619 6.86 0.00 0.00 2.71
2507 4432 2.279136 CGCTTGCGTCTGTACTATGTTC 59.721 50.000 6.86 0.00 0.00 3.18
2508 4433 3.250744 GCTTGCGTCTGTACTATGTTCA 58.749 45.455 0.00 0.00 0.00 3.18
2509 4434 3.304559 GCTTGCGTCTGTACTATGTTCAG 59.695 47.826 0.00 0.00 33.31 3.02
2510 4435 4.733850 CTTGCGTCTGTACTATGTTCAGA 58.266 43.478 3.51 3.51 37.56 3.27
2511 4436 4.357018 TGCGTCTGTACTATGTTCAGAG 57.643 45.455 7.17 4.33 39.79 3.35
2512 4437 4.007659 TGCGTCTGTACTATGTTCAGAGA 58.992 43.478 7.17 0.00 39.79 3.10
2513 4438 4.457949 TGCGTCTGTACTATGTTCAGAGAA 59.542 41.667 7.17 0.00 39.79 2.87
2514 4439 5.048294 TGCGTCTGTACTATGTTCAGAGAAA 60.048 40.000 7.17 0.00 39.79 2.52
2515 4440 5.513495 GCGTCTGTACTATGTTCAGAGAAAG 59.487 44.000 7.17 2.66 39.79 2.62
2516 4441 6.623114 GCGTCTGTACTATGTTCAGAGAAAGA 60.623 42.308 7.17 0.00 39.79 2.52
2517 4442 6.964370 CGTCTGTACTATGTTCAGAGAAAGAG 59.036 42.308 7.17 0.00 39.79 2.85
2518 4443 7.148390 CGTCTGTACTATGTTCAGAGAAAGAGA 60.148 40.741 7.17 0.87 39.79 3.10
2519 4444 8.516234 GTCTGTACTATGTTCAGAGAAAGAGAA 58.484 37.037 7.17 0.00 39.79 2.87
2520 4445 9.078990 TCTGTACTATGTTCAGAGAAAGAGAAA 57.921 33.333 1.38 0.00 35.61 2.52
2521 4446 9.134734 CTGTACTATGTTCAGAGAAAGAGAAAC 57.865 37.037 1.38 0.00 33.75 2.78
2522 4447 8.088981 TGTACTATGTTCAGAGAAAGAGAAACC 58.911 37.037 1.38 0.00 0.00 3.27
2523 4448 7.309770 ACTATGTTCAGAGAAAGAGAAACCT 57.690 36.000 1.38 0.00 0.00 3.50
2524 4449 7.740805 ACTATGTTCAGAGAAAGAGAAACCTT 58.259 34.615 1.38 0.00 0.00 3.50
2525 4450 8.214364 ACTATGTTCAGAGAAAGAGAAACCTTT 58.786 33.333 1.38 0.00 38.92 3.11
2526 4451 7.888250 ATGTTCAGAGAAAGAGAAACCTTTT 57.112 32.000 0.00 0.00 36.58 2.27
2527 4452 7.321745 TGTTCAGAGAAAGAGAAACCTTTTC 57.678 36.000 0.00 0.00 36.58 2.29
2528 4453 6.884295 TGTTCAGAGAAAGAGAAACCTTTTCA 59.116 34.615 1.72 0.00 36.58 2.69
2529 4454 7.066284 TGTTCAGAGAAAGAGAAACCTTTTCAG 59.934 37.037 1.72 0.00 36.58 3.02
2530 4455 6.889198 TCAGAGAAAGAGAAACCTTTTCAGA 58.111 36.000 1.72 0.00 36.58 3.27
2531 4456 7.512992 TCAGAGAAAGAGAAACCTTTTCAGAT 58.487 34.615 1.72 0.00 36.58 2.90
2532 4457 7.995488 TCAGAGAAAGAGAAACCTTTTCAGATT 59.005 33.333 1.72 0.00 36.58 2.40
2533 4458 8.628280 CAGAGAAAGAGAAACCTTTTCAGATTT 58.372 33.333 1.72 0.08 36.58 2.17
2534 4459 9.194972 AGAGAAAGAGAAACCTTTTCAGATTTT 57.805 29.630 1.72 0.00 36.58 1.82
2535 4460 9.809096 GAGAAAGAGAAACCTTTTCAGATTTTT 57.191 29.630 1.72 0.00 36.58 1.94
2536 4461 9.591792 AGAAAGAGAAACCTTTTCAGATTTTTG 57.408 29.630 1.72 0.00 36.58 2.44
2537 4462 9.586435 GAAAGAGAAACCTTTTCAGATTTTTGA 57.414 29.630 1.72 0.00 36.58 2.69
2538 4463 9.942850 AAAGAGAAACCTTTTCAGATTTTTGAA 57.057 25.926 1.72 0.00 32.89 2.69
2539 4464 9.942850 AAGAGAAACCTTTTCAGATTTTTGAAA 57.057 25.926 1.72 0.00 43.32 2.69
2541 4466 9.973246 GAGAAACCTTTTCAGATTTTTGAAAAC 57.027 29.630 9.20 1.82 46.50 2.43
2542 4467 9.725019 AGAAACCTTTTCAGATTTTTGAAAACT 57.275 25.926 9.20 3.67 46.50 2.66
2543 4468 9.973246 GAAACCTTTTCAGATTTTTGAAAACTC 57.027 29.630 9.20 0.32 46.50 3.01
2544 4469 9.725019 AAACCTTTTCAGATTTTTGAAAACTCT 57.275 25.926 4.89 4.89 46.50 3.24
2549 4474 9.868277 TTTTCAGATTTTTGAAAACTCTAAGCA 57.132 25.926 9.72 0.00 46.50 3.91
2551 4476 9.467258 TTCAGATTTTTGAAAACTCTAAGCATG 57.533 29.630 9.72 0.00 34.32 4.06
2552 4477 8.849168 TCAGATTTTTGAAAACTCTAAGCATGA 58.151 29.630 9.72 1.94 0.00 3.07
2553 4478 9.635520 CAGATTTTTGAAAACTCTAAGCATGAT 57.364 29.630 9.72 0.00 0.00 2.45
2557 4482 9.814899 TTTTTGAAAACTCTAAGCATGATTTCA 57.185 25.926 0.00 0.00 34.55 2.69
2558 4483 9.985730 TTTTGAAAACTCTAAGCATGATTTCAT 57.014 25.926 0.00 0.00 35.84 2.57
2559 4484 9.985730 TTTGAAAACTCTAAGCATGATTTCATT 57.014 25.926 0.00 0.00 35.84 2.57
2560 4485 9.985730 TTGAAAACTCTAAGCATGATTTCATTT 57.014 25.926 0.00 0.00 35.84 2.32
2561 4486 9.985730 TGAAAACTCTAAGCATGATTTCATTTT 57.014 25.926 0.00 4.63 33.61 1.82
2566 4491 9.236006 ACTCTAAGCATGATTTCATTTTAGTGT 57.764 29.630 0.00 15.25 35.55 3.55
2579 4504 9.932699 TTTCATTTTAGTGTAAAAATCGTCGAA 57.067 25.926 0.00 0.00 40.62 3.71
2580 4505 9.932699 TTCATTTTAGTGTAAAAATCGTCGAAA 57.067 25.926 0.00 0.00 40.62 3.46
2581 4506 9.932699 TCATTTTAGTGTAAAAATCGTCGAAAA 57.067 25.926 0.00 0.00 40.62 2.29
2585 4510 9.719279 TTTAGTGTAAAAATCGTCGAAAATTGT 57.281 25.926 0.00 0.00 0.00 2.71
2586 4511 7.831750 AGTGTAAAAATCGTCGAAAATTGTC 57.168 32.000 0.00 0.00 0.00 3.18
2587 4512 7.411274 AGTGTAAAAATCGTCGAAAATTGTCA 58.589 30.769 0.00 0.00 0.00 3.58
2588 4513 7.375017 AGTGTAAAAATCGTCGAAAATTGTCAC 59.625 33.333 0.00 8.52 0.00 3.67
2589 4514 6.633634 TGTAAAAATCGTCGAAAATTGTCACC 59.366 34.615 0.00 0.00 0.00 4.02
2590 4515 5.432885 AAAATCGTCGAAAATTGTCACCT 57.567 34.783 0.00 0.00 0.00 4.00
2591 4516 4.404507 AATCGTCGAAAATTGTCACCTG 57.595 40.909 0.00 0.00 0.00 4.00
2592 4517 2.828877 TCGTCGAAAATTGTCACCTGT 58.171 42.857 0.00 0.00 0.00 4.00
2593 4518 3.199677 TCGTCGAAAATTGTCACCTGTT 58.800 40.909 0.00 0.00 0.00 3.16
2594 4519 3.001838 TCGTCGAAAATTGTCACCTGTTG 59.998 43.478 0.00 0.00 0.00 3.33
2595 4520 3.628017 GTCGAAAATTGTCACCTGTTGG 58.372 45.455 0.00 0.00 39.83 3.77
2596 4521 3.314080 GTCGAAAATTGTCACCTGTTGGA 59.686 43.478 0.00 0.00 37.04 3.53
2597 4522 4.023193 GTCGAAAATTGTCACCTGTTGGAT 60.023 41.667 0.00 0.00 37.04 3.41
2598 4523 4.215399 TCGAAAATTGTCACCTGTTGGATC 59.785 41.667 0.00 0.00 37.04 3.36
2599 4524 4.216257 CGAAAATTGTCACCTGTTGGATCT 59.784 41.667 0.00 0.00 37.04 2.75
2600 4525 5.411361 CGAAAATTGTCACCTGTTGGATCTA 59.589 40.000 0.00 0.00 37.04 1.98
2601 4526 6.402550 CGAAAATTGTCACCTGTTGGATCTAG 60.403 42.308 0.00 0.00 37.04 2.43
2602 4527 5.762179 AATTGTCACCTGTTGGATCTAGA 57.238 39.130 0.00 0.00 37.04 2.43
2603 4528 4.537135 TTGTCACCTGTTGGATCTAGAC 57.463 45.455 0.00 0.00 37.04 2.59
2604 4529 3.779444 TGTCACCTGTTGGATCTAGACT 58.221 45.455 0.00 0.00 37.04 3.24
2605 4530 3.511540 TGTCACCTGTTGGATCTAGACTG 59.488 47.826 0.00 0.00 37.04 3.51
2606 4531 3.511934 GTCACCTGTTGGATCTAGACTGT 59.488 47.826 0.00 0.00 37.04 3.55
2607 4532 3.511540 TCACCTGTTGGATCTAGACTGTG 59.488 47.826 0.00 0.00 37.04 3.66
2608 4533 3.259374 CACCTGTTGGATCTAGACTGTGT 59.741 47.826 0.00 0.00 37.04 3.72
2609 4534 3.259374 ACCTGTTGGATCTAGACTGTGTG 59.741 47.826 0.00 0.00 37.04 3.82
2610 4535 3.257393 CTGTTGGATCTAGACTGTGTGC 58.743 50.000 0.00 0.00 0.00 4.57
2611 4536 2.028112 TGTTGGATCTAGACTGTGTGCC 60.028 50.000 0.00 0.00 0.00 5.01
2612 4537 2.234908 GTTGGATCTAGACTGTGTGCCT 59.765 50.000 0.00 0.00 0.00 4.75
2613 4538 2.103373 TGGATCTAGACTGTGTGCCTC 58.897 52.381 0.00 0.00 0.00 4.70
2614 4539 2.291865 TGGATCTAGACTGTGTGCCTCT 60.292 50.000 0.00 0.00 0.00 3.69
2615 4540 3.053619 TGGATCTAGACTGTGTGCCTCTA 60.054 47.826 0.00 0.00 0.00 2.43
2616 4541 3.568007 GGATCTAGACTGTGTGCCTCTAG 59.432 52.174 0.00 0.00 36.38 2.43
2617 4542 3.006112 TCTAGACTGTGTGCCTCTAGG 57.994 52.381 0.00 0.00 35.93 3.02
2618 4543 2.028130 CTAGACTGTGTGCCTCTAGGG 58.972 57.143 0.00 0.00 32.89 3.53
2619 4544 0.616111 AGACTGTGTGCCTCTAGGGG 60.616 60.000 3.44 3.44 35.18 4.79
2626 4551 4.893601 GCCTCTAGGGGCGTTCGC 62.894 72.222 20.25 8.75 42.82 4.70
2627 4552 3.148279 CCTCTAGGGGCGTTCGCT 61.148 66.667 16.40 0.16 41.77 4.93
2628 4553 2.105128 CTCTAGGGGCGTTCGCTG 59.895 66.667 16.40 3.51 39.16 5.18
2629 4554 3.432051 CTCTAGGGGCGTTCGCTGG 62.432 68.421 16.40 0.03 39.16 4.85
2635 4560 3.567797 GGCGTTCGCTGGCATCTC 61.568 66.667 16.40 0.00 0.00 2.75
2636 4561 2.815211 GCGTTCGCTGGCATCTCA 60.815 61.111 9.99 0.00 0.00 3.27
2637 4562 3.084579 CGTTCGCTGGCATCTCAC 58.915 61.111 0.00 0.00 0.00 3.51
2638 4563 2.456119 CGTTCGCTGGCATCTCACC 61.456 63.158 0.00 0.00 0.00 4.02
2639 4564 2.109126 GTTCGCTGGCATCTCACCC 61.109 63.158 0.00 0.00 0.00 4.61
2640 4565 2.592032 TTCGCTGGCATCTCACCCA 61.592 57.895 0.00 0.00 0.00 4.51
2641 4566 2.803155 TTCGCTGGCATCTCACCCAC 62.803 60.000 0.00 0.00 0.00 4.61
2642 4567 2.821366 GCTGGCATCTCACCCACG 60.821 66.667 0.00 0.00 0.00 4.94
2643 4568 2.124983 CTGGCATCTCACCCACGG 60.125 66.667 0.00 0.00 0.00 4.94
2644 4569 2.927856 TGGCATCTCACCCACGGT 60.928 61.111 0.00 0.00 35.62 4.83
2662 4587 2.644887 TGAACATTCACCAGGCAGC 58.355 52.632 0.00 0.00 31.01 5.25
2663 4588 0.111061 TGAACATTCACCAGGCAGCT 59.889 50.000 0.00 0.00 31.01 4.24
2664 4589 1.251251 GAACATTCACCAGGCAGCTT 58.749 50.000 0.00 0.00 0.00 3.74
2665 4590 1.615392 GAACATTCACCAGGCAGCTTT 59.385 47.619 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.301027 CCCATCGGAGCGGTAGGC 62.301 72.222 0.00 0.00 44.05 3.93
5 6 4.301027 GCCCATCGGAGCGGTAGG 62.301 72.222 0.00 0.00 0.00 3.18
6 7 3.506059 CTGCCCATCGGAGCGGTAG 62.506 68.421 0.00 0.00 0.00 3.18
7 8 3.536917 CTGCCCATCGGAGCGGTA 61.537 66.667 0.00 0.00 0.00 4.02
10 11 3.451556 ATCACTGCCCATCGGAGCG 62.452 63.158 0.00 0.00 0.00 5.03
11 12 1.890979 CATCACTGCCCATCGGAGC 60.891 63.158 0.00 0.00 0.00 4.70
12 13 0.249784 CTCATCACTGCCCATCGGAG 60.250 60.000 0.00 0.00 0.00 4.63
13 14 0.687427 TCTCATCACTGCCCATCGGA 60.687 55.000 0.00 0.00 0.00 4.55
14 15 0.395686 ATCTCATCACTGCCCATCGG 59.604 55.000 0.00 0.00 0.00 4.18
15 16 1.509703 CATCTCATCACTGCCCATCG 58.490 55.000 0.00 0.00 0.00 3.84
16 17 1.142465 ACCATCTCATCACTGCCCATC 59.858 52.381 0.00 0.00 0.00 3.51
17 18 1.133884 CACCATCTCATCACTGCCCAT 60.134 52.381 0.00 0.00 0.00 4.00
18 19 0.253894 CACCATCTCATCACTGCCCA 59.746 55.000 0.00 0.00 0.00 5.36
19 20 0.543277 TCACCATCTCATCACTGCCC 59.457 55.000 0.00 0.00 0.00 5.36
20 21 2.408271 TTCACCATCTCATCACTGCC 57.592 50.000 0.00 0.00 0.00 4.85
21 22 3.538591 TGATTCACCATCTCATCACTGC 58.461 45.455 0.00 0.00 32.34 4.40
22 23 4.515567 CCATGATTCACCATCTCATCACTG 59.484 45.833 0.00 0.00 32.34 3.66
23 24 4.165565 ACCATGATTCACCATCTCATCACT 59.834 41.667 0.00 0.00 32.34 3.41
24 25 4.275196 CACCATGATTCACCATCTCATCAC 59.725 45.833 0.00 0.00 32.34 3.06
25 26 4.457466 CACCATGATTCACCATCTCATCA 58.543 43.478 0.00 0.00 32.34 3.07
26 27 3.252701 GCACCATGATTCACCATCTCATC 59.747 47.826 0.00 0.00 32.34 2.92
27 28 3.220110 GCACCATGATTCACCATCTCAT 58.780 45.455 0.00 0.00 32.34 2.90
28 29 2.646930 GCACCATGATTCACCATCTCA 58.353 47.619 0.00 0.00 32.34 3.27
29 30 1.952296 GGCACCATGATTCACCATCTC 59.048 52.381 0.00 0.00 32.34 2.75
30 31 1.567649 AGGCACCATGATTCACCATCT 59.432 47.619 0.00 0.00 32.34 2.90
31 32 2.062971 AGGCACCATGATTCACCATC 57.937 50.000 0.00 0.00 0.00 3.51
32 33 2.381911 GAAGGCACCATGATTCACCAT 58.618 47.619 0.00 0.00 0.00 3.55
33 34 1.838112 GAAGGCACCATGATTCACCA 58.162 50.000 0.00 0.00 0.00 4.17
34 35 0.734889 CGAAGGCACCATGATTCACC 59.265 55.000 0.00 0.00 0.00 4.02
35 36 0.099436 GCGAAGGCACCATGATTCAC 59.901 55.000 0.00 0.00 39.62 3.18
36 37 0.035152 AGCGAAGGCACCATGATTCA 60.035 50.000 0.00 0.00 43.41 2.57
37 38 0.659957 GAGCGAAGGCACCATGATTC 59.340 55.000 0.00 0.00 43.41 2.52
38 39 0.254178 AGAGCGAAGGCACCATGATT 59.746 50.000 0.00 0.00 43.41 2.57
39 40 0.463295 CAGAGCGAAGGCACCATGAT 60.463 55.000 0.00 0.00 43.41 2.45
40 41 1.078918 CAGAGCGAAGGCACCATGA 60.079 57.895 0.00 0.00 43.41 3.07
41 42 2.110967 CCAGAGCGAAGGCACCATG 61.111 63.158 0.00 0.00 43.41 3.66
42 43 2.270205 CCAGAGCGAAGGCACCAT 59.730 61.111 0.00 0.00 43.41 3.55
48 49 1.394618 ACTACTAGCCAGAGCGAAGG 58.605 55.000 0.00 0.00 46.67 3.46
49 50 3.512033 AAACTACTAGCCAGAGCGAAG 57.488 47.619 0.00 0.00 46.67 3.79
50 51 3.257375 TCAAAACTACTAGCCAGAGCGAA 59.743 43.478 0.00 0.00 46.67 4.70
51 52 2.823747 TCAAAACTACTAGCCAGAGCGA 59.176 45.455 0.00 0.00 46.67 4.93
52 53 3.232213 TCAAAACTACTAGCCAGAGCG 57.768 47.619 0.00 0.00 46.67 5.03
53 54 6.342111 ACTTATCAAAACTACTAGCCAGAGC 58.658 40.000 0.00 0.00 40.32 4.09
54 55 8.779354 AAACTTATCAAAACTACTAGCCAGAG 57.221 34.615 0.00 0.00 0.00 3.35
55 56 9.569122 AAAAACTTATCAAAACTACTAGCCAGA 57.431 29.630 0.00 0.00 0.00 3.86
91 92 1.016130 CCGAGTGCTGTACCTGCAAG 61.016 60.000 11.42 7.10 39.78 4.01
92 93 1.005037 CCGAGTGCTGTACCTGCAA 60.005 57.895 11.42 0.00 39.78 4.08
93 94 2.656646 CCGAGTGCTGTACCTGCA 59.343 61.111 6.56 6.56 36.05 4.41
94 95 2.125512 CCCGAGTGCTGTACCTGC 60.126 66.667 1.55 1.55 0.00 4.85
95 96 1.513158 CTCCCGAGTGCTGTACCTG 59.487 63.158 0.00 0.00 0.00 4.00
96 97 1.682684 CCTCCCGAGTGCTGTACCT 60.683 63.158 0.00 0.00 0.00 3.08
97 98 1.043673 ATCCTCCCGAGTGCTGTACC 61.044 60.000 0.00 0.00 0.00 3.34
98 99 0.386113 GATCCTCCCGAGTGCTGTAC 59.614 60.000 0.00 0.00 0.00 2.90
99 100 0.033503 TGATCCTCCCGAGTGCTGTA 60.034 55.000 0.00 0.00 0.00 2.74
100 101 1.305297 TGATCCTCCCGAGTGCTGT 60.305 57.895 0.00 0.00 0.00 4.40
101 102 1.142748 GTGATCCTCCCGAGTGCTG 59.857 63.158 0.00 0.00 0.00 4.41
102 103 2.418910 CGTGATCCTCCCGAGTGCT 61.419 63.158 0.00 0.00 0.00 4.40
103 104 2.105128 CGTGATCCTCCCGAGTGC 59.895 66.667 0.00 0.00 0.00 4.40
104 105 2.052690 ACCGTGATCCTCCCGAGTG 61.053 63.158 0.00 0.00 0.00 3.51
105 106 2.052690 CACCGTGATCCTCCCGAGT 61.053 63.158 0.00 0.00 0.00 4.18
106 107 2.808315 CACCGTGATCCTCCCGAG 59.192 66.667 0.00 0.00 0.00 4.63
107 108 3.458163 GCACCGTGATCCTCCCGA 61.458 66.667 1.65 0.00 0.00 5.14
108 109 2.907897 GAAGCACCGTGATCCTCCCG 62.908 65.000 1.65 0.00 0.00 5.14
109 110 1.153349 GAAGCACCGTGATCCTCCC 60.153 63.158 1.65 0.00 0.00 4.30
110 111 0.250513 AAGAAGCACCGTGATCCTCC 59.749 55.000 1.65 0.00 0.00 4.30
111 112 1.205893 AGAAGAAGCACCGTGATCCTC 59.794 52.381 1.65 0.00 0.00 3.71
112 113 1.270907 AGAAGAAGCACCGTGATCCT 58.729 50.000 1.65 0.00 0.00 3.24
113 114 2.003301 GAAGAAGAAGCACCGTGATCC 58.997 52.381 1.65 0.00 0.00 3.36
114 115 1.656095 CGAAGAAGAAGCACCGTGATC 59.344 52.381 1.65 0.00 0.00 2.92
115 116 1.272490 TCGAAGAAGAAGCACCGTGAT 59.728 47.619 1.65 0.00 0.00 3.06
116 117 0.671796 TCGAAGAAGAAGCACCGTGA 59.328 50.000 1.65 0.00 0.00 4.35
117 118 1.063806 CTCGAAGAAGAAGCACCGTG 58.936 55.000 0.00 0.00 34.09 4.94
118 119 0.674534 ACTCGAAGAAGAAGCACCGT 59.325 50.000 0.00 0.00 34.09 4.83
119 120 1.784525 AACTCGAAGAAGAAGCACCG 58.215 50.000 0.00 0.00 34.09 4.94
120 121 5.172205 AGATAAACTCGAAGAAGAAGCACC 58.828 41.667 0.00 0.00 34.09 5.01
121 122 6.183360 GGAAGATAAACTCGAAGAAGAAGCAC 60.183 42.308 0.00 0.00 34.09 4.40
122 123 5.869888 GGAAGATAAACTCGAAGAAGAAGCA 59.130 40.000 0.00 0.00 34.09 3.91
123 124 5.004916 CGGAAGATAAACTCGAAGAAGAAGC 59.995 44.000 0.00 0.00 34.09 3.86
124 125 5.517054 CCGGAAGATAAACTCGAAGAAGAAG 59.483 44.000 0.00 0.00 34.09 2.85
125 126 5.408356 CCGGAAGATAAACTCGAAGAAGAA 58.592 41.667 0.00 0.00 34.09 2.52
126 127 4.142227 CCCGGAAGATAAACTCGAAGAAGA 60.142 45.833 0.73 0.00 34.09 2.87
127 128 4.113354 CCCGGAAGATAAACTCGAAGAAG 58.887 47.826 0.73 0.00 34.09 2.85
128 129 3.118884 CCCCGGAAGATAAACTCGAAGAA 60.119 47.826 0.73 0.00 34.09 2.52
129 130 2.429610 CCCCGGAAGATAAACTCGAAGA 59.570 50.000 0.73 0.00 0.00 2.87
130 131 2.429610 TCCCCGGAAGATAAACTCGAAG 59.570 50.000 0.73 0.00 0.00 3.79
131 132 2.167075 GTCCCCGGAAGATAAACTCGAA 59.833 50.000 0.73 0.00 0.00 3.71
132 133 1.753073 GTCCCCGGAAGATAAACTCGA 59.247 52.381 0.73 0.00 0.00 4.04
133 134 1.535437 CGTCCCCGGAAGATAAACTCG 60.535 57.143 0.73 0.00 0.00 4.18
134 135 1.479730 ACGTCCCCGGAAGATAAACTC 59.520 52.381 0.73 0.00 38.78 3.01
135 136 1.565067 ACGTCCCCGGAAGATAAACT 58.435 50.000 0.73 0.00 38.78 2.66
136 137 3.181472 ACATACGTCCCCGGAAGATAAAC 60.181 47.826 0.73 0.00 38.78 2.01
137 138 3.033184 ACATACGTCCCCGGAAGATAAA 58.967 45.455 0.73 0.00 38.78 1.40
138 139 2.669781 ACATACGTCCCCGGAAGATAA 58.330 47.619 0.73 0.00 38.78 1.75
139 140 2.369983 ACATACGTCCCCGGAAGATA 57.630 50.000 0.73 0.00 38.78 1.98
140 141 1.492764 AACATACGTCCCCGGAAGAT 58.507 50.000 0.73 0.00 38.78 2.40
141 142 1.205417 GAAACATACGTCCCCGGAAGA 59.795 52.381 0.73 0.00 38.78 2.87
142 143 1.206371 AGAAACATACGTCCCCGGAAG 59.794 52.381 0.73 0.00 38.78 3.46
143 144 1.066716 CAGAAACATACGTCCCCGGAA 60.067 52.381 0.73 0.00 38.78 4.30
144 145 0.533491 CAGAAACATACGTCCCCGGA 59.467 55.000 0.73 0.00 38.78 5.14
145 146 1.087771 GCAGAAACATACGTCCCCGG 61.088 60.000 0.00 0.00 38.78 5.73
146 147 1.087771 GGCAGAAACATACGTCCCCG 61.088 60.000 0.00 0.00 40.83 5.73
147 148 1.087771 CGGCAGAAACATACGTCCCC 61.088 60.000 0.00 0.00 0.00 4.81
148 149 0.390735 ACGGCAGAAACATACGTCCC 60.391 55.000 0.00 0.00 31.39 4.46
149 150 0.997196 GACGGCAGAAACATACGTCC 59.003 55.000 0.00 0.00 45.70 4.79
151 152 2.288579 TGAAGACGGCAGAAACATACGT 60.289 45.455 0.00 0.00 40.85 3.57
156 157 1.522668 CCATGAAGACGGCAGAAACA 58.477 50.000 0.00 0.00 0.00 2.83
160 161 1.596934 GTCCCATGAAGACGGCAGA 59.403 57.895 0.00 0.00 0.00 4.26
172 173 0.042131 TCCTTACCTCACCGTCCCAT 59.958 55.000 0.00 0.00 0.00 4.00
177 178 2.165845 CGAGAAATCCTTACCTCACCGT 59.834 50.000 0.00 0.00 0.00 4.83
181 182 4.466370 ACATGACGAGAAATCCTTACCTCA 59.534 41.667 0.00 0.00 0.00 3.86
187 188 3.265791 GCAGACATGACGAGAAATCCTT 58.734 45.455 0.00 0.00 0.00 3.36
191 192 1.002366 GCGCAGACATGACGAGAAAT 58.998 50.000 0.30 0.00 0.00 2.17
210 211 3.864686 CACCAAATCTCGCGGCCG 61.865 66.667 24.05 24.05 0.00 6.13
212 213 0.373716 CTAACACCAAATCTCGCGGC 59.626 55.000 6.13 0.00 0.00 6.53
214 215 5.464965 AATAACTAACACCAAATCTCGCG 57.535 39.130 0.00 0.00 0.00 5.87
238 239 8.154203 TCGCCATTGAACCTTTGAATATATCTA 58.846 33.333 0.00 0.00 0.00 1.98
243 244 4.201910 CGTCGCCATTGAACCTTTGAATAT 60.202 41.667 0.00 0.00 0.00 1.28
252 253 0.997196 GTAGTCGTCGCCATTGAACC 59.003 55.000 0.00 0.00 0.00 3.62
270 271 2.602568 ACCAACTCCCGTAGCCGT 60.603 61.111 0.00 0.00 0.00 5.68
272 273 1.623542 ATGGACCAACTCCCGTAGCC 61.624 60.000 0.00 0.00 38.49 3.93
273 274 1.068741 CTATGGACCAACTCCCGTAGC 59.931 57.143 0.00 0.00 38.49 3.58
274 275 1.687123 CCTATGGACCAACTCCCGTAG 59.313 57.143 0.00 0.00 40.21 3.51
278 279 0.470341 GCTCCTATGGACCAACTCCC 59.530 60.000 0.00 0.00 38.49 4.30
279 280 1.134371 GTGCTCCTATGGACCAACTCC 60.134 57.143 0.00 0.00 39.97 3.85
281 282 0.537188 CGTGCTCCTATGGACCAACT 59.463 55.000 0.00 0.00 0.00 3.16
290 292 0.458543 CTTCGTGCACGTGCTCCTAT 60.459 55.000 37.59 0.00 42.66 2.57
294 296 1.215655 AAGTCTTCGTGCACGTGCTC 61.216 55.000 37.59 32.65 42.66 4.26
300 302 2.410053 CAGCTAGAAAGTCTTCGTGCAC 59.590 50.000 6.82 6.82 37.22 4.57
323 325 2.353889 CCATCAGAACAAGCCTTCGATG 59.646 50.000 0.00 0.00 34.49 3.84
329 331 2.092538 CCATCTCCATCAGAACAAGCCT 60.093 50.000 0.00 0.00 33.62 4.58
345 347 0.815734 CTACCGGACGACAACCATCT 59.184 55.000 9.46 0.00 0.00 2.90
697 737 0.390735 ACTACCCAAATCCGTGCGAC 60.391 55.000 0.00 0.00 0.00 5.19
715 755 4.041723 CGGTCCAACATTGTCAAGAAAAC 58.958 43.478 0.00 0.00 0.00 2.43
763 810 0.179023 GACGACCTCCTCTCGGGTAT 60.179 60.000 0.00 0.00 35.77 2.73
842 899 5.559035 CGATCCGGCATTTAATTTCTCTGAC 60.559 44.000 0.00 0.00 0.00 3.51
1600 3522 3.199508 ACCAGCAGCATCTTCAAGTAGAT 59.800 43.478 0.00 0.00 35.26 1.98
1714 3636 2.695666 AGCTCAACTACCTACGATGCAT 59.304 45.455 0.00 0.00 0.00 3.96
1729 3651 3.737559 ACAATAACCATGGGAGCTCAA 57.262 42.857 18.09 3.06 0.00 3.02
1747 3670 2.104622 TGCTCTCCACACTGATCAAACA 59.895 45.455 0.00 0.00 0.00 2.83
1824 3747 4.143543 TGCACAGATCAAATTCACTGGAA 58.856 39.130 0.00 0.00 37.45 3.53
1825 3748 3.753815 TGCACAGATCAAATTCACTGGA 58.246 40.909 0.00 0.00 35.08 3.86
1848 3771 9.428363 GCATGTTTCAATGTAAATGCATAAATG 57.572 29.630 0.00 0.00 34.31 2.32
1907 3830 1.637553 AGCCATCACCCAGTCAAGAAT 59.362 47.619 0.00 0.00 0.00 2.40
1928 3851 0.452784 GCAAAGTCGCAAAGTAGCCG 60.453 55.000 0.00 0.00 0.00 5.52
1929 3852 0.591170 TGCAAAGTCGCAAAGTAGCC 59.409 50.000 0.00 0.00 39.45 3.93
2201 4126 5.827326 AAGGTTTCTAGACAAAGGTAGCT 57.173 39.130 0.00 0.00 0.00 3.32
2241 4166 2.840651 CTCTAACCATCCAACCAGAGGT 59.159 50.000 0.00 0.00 37.65 3.85
2242 4167 2.171448 CCTCTAACCATCCAACCAGAGG 59.829 54.545 1.32 1.32 42.25 3.69
2243 4168 2.171448 CCCTCTAACCATCCAACCAGAG 59.829 54.545 0.00 0.00 0.00 3.35
2244 4169 2.196595 CCCTCTAACCATCCAACCAGA 58.803 52.381 0.00 0.00 0.00 3.86
2245 4170 2.092914 GTCCCTCTAACCATCCAACCAG 60.093 54.545 0.00 0.00 0.00 4.00
2246 4171 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
2247 4172 2.092914 CAGTCCCTCTAACCATCCAACC 60.093 54.545 0.00 0.00 0.00 3.77
2248 4173 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
2249 4174 2.571653 CACAGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
2250 4175 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
2251 4176 1.486726 CCACAGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
2252 4177 2.188817 ACCACAGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
2253 4178 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
2254 4179 3.371965 GATACCACAGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
2255 4180 2.699321 GGATACCACAGTCCCTCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
2271 4196 1.227383 CTTGGTGGGCTGGGGATAC 59.773 63.158 0.00 0.00 0.00 2.24
2272 4197 2.006415 CCTTGGTGGGCTGGGGATA 61.006 63.158 0.00 0.00 0.00 2.59
2273 4198 3.350163 CCTTGGTGGGCTGGGGAT 61.350 66.667 0.00 0.00 0.00 3.85
2274 4199 4.938756 ACCTTGGTGGGCTGGGGA 62.939 66.667 0.00 0.00 41.11 4.81
2275 4200 3.886550 GAACCTTGGTGGGCTGGGG 62.887 68.421 0.00 0.00 41.11 4.96
2276 4201 2.283173 GAACCTTGGTGGGCTGGG 60.283 66.667 0.00 0.00 41.11 4.45
2277 4202 0.758685 TTTGAACCTTGGTGGGCTGG 60.759 55.000 0.00 0.00 41.11 4.85
2278 4203 1.273327 GATTTGAACCTTGGTGGGCTG 59.727 52.381 0.00 0.00 41.11 4.85
2279 4204 1.632589 GATTTGAACCTTGGTGGGCT 58.367 50.000 0.00 0.00 41.11 5.19
2280 4205 0.608130 GGATTTGAACCTTGGTGGGC 59.392 55.000 0.00 0.00 41.11 5.36
2281 4206 1.895131 CAGGATTTGAACCTTGGTGGG 59.105 52.381 0.00 0.00 41.11 4.61
2282 4207 1.895131 CCAGGATTTGAACCTTGGTGG 59.105 52.381 0.00 0.00 42.93 4.61
2283 4208 2.297033 CACCAGGATTTGAACCTTGGTG 59.703 50.000 5.13 5.13 43.12 4.17
2284 4209 2.597455 CACCAGGATTTGAACCTTGGT 58.403 47.619 0.00 0.00 38.47 3.67
2285 4210 1.273327 GCACCAGGATTTGAACCTTGG 59.727 52.381 0.00 0.00 35.35 3.61
2286 4211 2.229784 GAGCACCAGGATTTGAACCTTG 59.770 50.000 0.00 0.00 35.35 3.61
2287 4212 2.519013 GAGCACCAGGATTTGAACCTT 58.481 47.619 0.00 0.00 35.35 3.50
2288 4213 1.611673 CGAGCACCAGGATTTGAACCT 60.612 52.381 0.00 0.00 38.40 3.50
2289 4214 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
2290 4215 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
2291 4216 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
2292 4217 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
2293 4218 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
2294 4219 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
2295 4220 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
2296 4221 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
2297 4222 2.288666 GAATAAATGCGAGCACCAGGA 58.711 47.619 0.00 0.00 0.00 3.86
2298 4223 1.334869 GGAATAAATGCGAGCACCAGG 59.665 52.381 0.00 0.00 0.00 4.45
2299 4224 2.032550 CAGGAATAAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
2300 4225 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
2301 4226 1.334869 CCAGGAATAAATGCGAGCACC 59.665 52.381 0.00 0.00 0.00 5.01
2302 4227 2.288666 TCCAGGAATAAATGCGAGCAC 58.711 47.619 0.00 0.00 0.00 4.40
2303 4228 2.708216 TCCAGGAATAAATGCGAGCA 57.292 45.000 0.00 0.00 0.00 4.26
2304 4229 4.574599 AAATCCAGGAATAAATGCGAGC 57.425 40.909 0.00 0.00 0.00 5.03
2305 4230 8.352201 TGAAATAAATCCAGGAATAAATGCGAG 58.648 33.333 0.00 0.00 0.00 5.03
2306 4231 8.231692 TGAAATAAATCCAGGAATAAATGCGA 57.768 30.769 0.00 0.00 0.00 5.10
2307 4232 8.511465 CTGAAATAAATCCAGGAATAAATGCG 57.489 34.615 0.00 0.00 0.00 4.73
2317 4242 7.047460 CTGGAAATCCTGAAATAAATCCAGG 57.953 40.000 9.98 0.00 45.65 4.45
2319 4244 5.067674 CGCTGGAAATCCTGAAATAAATCCA 59.932 40.000 10.20 0.00 37.15 3.41
2320 4245 5.299279 TCGCTGGAAATCCTGAAATAAATCC 59.701 40.000 10.20 0.00 37.15 3.01
2321 4246 6.377327 TCGCTGGAAATCCTGAAATAAATC 57.623 37.500 10.20 0.00 37.15 2.17
2322 4247 6.015940 GGATCGCTGGAAATCCTGAAATAAAT 60.016 38.462 10.20 0.00 38.74 1.40
2323 4248 5.299279 GGATCGCTGGAAATCCTGAAATAAA 59.701 40.000 10.20 0.00 38.74 1.40
2324 4249 4.821805 GGATCGCTGGAAATCCTGAAATAA 59.178 41.667 10.20 0.00 38.74 1.40
2325 4250 4.389374 GGATCGCTGGAAATCCTGAAATA 58.611 43.478 10.20 0.00 38.74 1.40
2326 4251 3.217626 GGATCGCTGGAAATCCTGAAAT 58.782 45.455 10.20 2.84 38.74 2.17
2327 4252 2.643551 GGATCGCTGGAAATCCTGAAA 58.356 47.619 10.20 0.00 38.74 2.69
2328 4253 1.473257 CGGATCGCTGGAAATCCTGAA 60.473 52.381 10.20 0.00 39.49 3.02
2329 4254 0.104855 CGGATCGCTGGAAATCCTGA 59.895 55.000 10.20 1.98 39.49 3.86
2330 4255 2.609825 CGGATCGCTGGAAATCCTG 58.390 57.895 0.44 1.39 39.49 3.86
2342 4267 0.877649 CTCCCACTGAATGCGGATCG 60.878 60.000 0.00 0.00 30.11 3.69
2343 4268 0.533755 CCTCCCACTGAATGCGGATC 60.534 60.000 0.00 0.00 30.11 3.36
2344 4269 0.982852 TCCTCCCACTGAATGCGGAT 60.983 55.000 0.00 0.00 30.11 4.18
2345 4270 1.612146 TCCTCCCACTGAATGCGGA 60.612 57.895 0.00 0.00 0.00 5.54
2346 4271 1.153289 CTCCTCCCACTGAATGCGG 60.153 63.158 0.00 0.00 0.00 5.69
2347 4272 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
2348 4273 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
2349 4274 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
2350 4275 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
2351 4276 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
2352 4277 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
2353 4278 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
2354 4279 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
2373 4298 6.094739 TCATCTTGAAATTTCGTCATCGAC 57.905 37.500 13.34 0.00 46.03 4.20
2374 4299 6.908870 ATCATCTTGAAATTTCGTCATCGA 57.091 33.333 13.34 6.17 44.66 3.59
2375 4300 7.267811 GCATATCATCTTGAAATTTCGTCATCG 59.732 37.037 13.34 1.09 38.55 3.84
2376 4301 7.536622 GGCATATCATCTTGAAATTTCGTCATC 59.463 37.037 13.34 0.00 0.00 2.92
2377 4302 7.365741 GGCATATCATCTTGAAATTTCGTCAT 58.634 34.615 13.34 2.23 0.00 3.06
2378 4303 6.511605 CGGCATATCATCTTGAAATTTCGTCA 60.512 38.462 13.34 0.00 0.00 4.35
2379 4304 5.848036 CGGCATATCATCTTGAAATTTCGTC 59.152 40.000 13.34 0.00 0.00 4.20
2380 4305 5.277974 CCGGCATATCATCTTGAAATTTCGT 60.278 40.000 13.34 0.00 0.00 3.85
2381 4306 5.149273 CCGGCATATCATCTTGAAATTTCG 58.851 41.667 13.34 0.46 0.00 3.46
2382 4307 4.919754 GCCGGCATATCATCTTGAAATTTC 59.080 41.667 24.80 11.41 0.00 2.17
2383 4308 4.586001 AGCCGGCATATCATCTTGAAATTT 59.414 37.500 31.54 0.00 0.00 1.82
2384 4309 4.147321 AGCCGGCATATCATCTTGAAATT 58.853 39.130 31.54 0.00 0.00 1.82
2385 4310 3.755378 GAGCCGGCATATCATCTTGAAAT 59.245 43.478 31.54 0.06 0.00 2.17
2386 4311 3.141398 GAGCCGGCATATCATCTTGAAA 58.859 45.455 31.54 0.00 0.00 2.69
2387 4312 2.104622 TGAGCCGGCATATCATCTTGAA 59.895 45.455 31.54 0.00 0.00 2.69
2388 4313 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
2389 4314 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
2390 4315 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
2391 4316 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
2392 4317 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
2393 4318 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
2394 4319 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
2395 4320 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
2396 4321 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
2397 4322 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
2398 4323 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
2399 4324 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
2400 4325 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
2401 4326 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
2402 4327 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
2403 4328 0.321996 AACCTCCGAAAGACTGAGCC 59.678 55.000 0.00 0.00 0.00 4.70
2404 4329 1.273886 AGAACCTCCGAAAGACTGAGC 59.726 52.381 0.00 0.00 0.00 4.26
2405 4330 2.558795 TGAGAACCTCCGAAAGACTGAG 59.441 50.000 0.00 0.00 0.00 3.35
2406 4331 2.594131 TGAGAACCTCCGAAAGACTGA 58.406 47.619 0.00 0.00 0.00 3.41
2407 4332 3.601443 ATGAGAACCTCCGAAAGACTG 57.399 47.619 0.00 0.00 0.00 3.51
2408 4333 3.702045 CCTATGAGAACCTCCGAAAGACT 59.298 47.826 0.00 0.00 0.00 3.24
2409 4334 3.181474 CCCTATGAGAACCTCCGAAAGAC 60.181 52.174 0.00 0.00 0.00 3.01
2410 4335 3.031736 CCCTATGAGAACCTCCGAAAGA 58.968 50.000 0.00 0.00 0.00 2.52
2411 4336 2.103263 CCCCTATGAGAACCTCCGAAAG 59.897 54.545 0.00 0.00 0.00 2.62
2412 4337 2.116238 CCCCTATGAGAACCTCCGAAA 58.884 52.381 0.00 0.00 0.00 3.46
2413 4338 1.007963 ACCCCTATGAGAACCTCCGAA 59.992 52.381 0.00 0.00 0.00 4.30
2414 4339 0.635009 ACCCCTATGAGAACCTCCGA 59.365 55.000 0.00 0.00 0.00 4.55
2415 4340 2.158505 TCTACCCCTATGAGAACCTCCG 60.159 54.545 0.00 0.00 0.00 4.63
2416 4341 3.117054 ACTCTACCCCTATGAGAACCTCC 60.117 52.174 0.00 0.00 0.00 4.30
2417 4342 3.892588 CACTCTACCCCTATGAGAACCTC 59.107 52.174 0.00 0.00 0.00 3.85
2418 4343 3.272551 ACACTCTACCCCTATGAGAACCT 59.727 47.826 0.00 0.00 0.00 3.50
2419 4344 3.385111 CACACTCTACCCCTATGAGAACC 59.615 52.174 0.00 0.00 0.00 3.62
2420 4345 3.181474 GCACACTCTACCCCTATGAGAAC 60.181 52.174 0.00 0.00 0.00 3.01
2421 4346 3.031736 GCACACTCTACCCCTATGAGAA 58.968 50.000 0.00 0.00 0.00 2.87
2422 4347 2.024369 TGCACACTCTACCCCTATGAGA 60.024 50.000 0.00 0.00 0.00 3.27
2423 4348 2.388735 TGCACACTCTACCCCTATGAG 58.611 52.381 0.00 0.00 0.00 2.90
2424 4349 2.543037 TGCACACTCTACCCCTATGA 57.457 50.000 0.00 0.00 0.00 2.15
2425 4350 2.435805 ACATGCACACTCTACCCCTATG 59.564 50.000 0.00 0.00 0.00 2.23
2426 4351 2.435805 CACATGCACACTCTACCCCTAT 59.564 50.000 0.00 0.00 0.00 2.57
2427 4352 1.831106 CACATGCACACTCTACCCCTA 59.169 52.381 0.00 0.00 0.00 3.53
2428 4353 0.615331 CACATGCACACTCTACCCCT 59.385 55.000 0.00 0.00 0.00 4.79
2429 4354 0.324943 ACACATGCACACTCTACCCC 59.675 55.000 0.00 0.00 0.00 4.95
2430 4355 1.442769 CACACATGCACACTCTACCC 58.557 55.000 0.00 0.00 0.00 3.69
2442 4367 2.083774 ACCCTTATGAACGCACACATG 58.916 47.619 0.00 0.00 0.00 3.21
2443 4368 2.083774 CACCCTTATGAACGCACACAT 58.916 47.619 0.00 0.00 0.00 3.21
2444 4369 1.070914 TCACCCTTATGAACGCACACA 59.929 47.619 0.00 0.00 0.00 3.72
2445 4370 1.732259 CTCACCCTTATGAACGCACAC 59.268 52.381 0.00 0.00 0.00 3.82
2446 4371 1.346395 ACTCACCCTTATGAACGCACA 59.654 47.619 0.00 0.00 0.00 4.57
2447 4372 1.732259 CACTCACCCTTATGAACGCAC 59.268 52.381 0.00 0.00 0.00 5.34
2448 4373 1.346395 ACACTCACCCTTATGAACGCA 59.654 47.619 0.00 0.00 0.00 5.24
2449 4374 2.094762 ACACTCACCCTTATGAACGC 57.905 50.000 0.00 0.00 0.00 4.84
2450 4375 3.555956 GCATACACTCACCCTTATGAACG 59.444 47.826 0.00 0.00 0.00 3.95
2451 4376 3.555956 CGCATACACTCACCCTTATGAAC 59.444 47.826 0.00 0.00 0.00 3.18
2452 4377 3.792401 CGCATACACTCACCCTTATGAA 58.208 45.455 0.00 0.00 0.00 2.57
2453 4378 2.483013 GCGCATACACTCACCCTTATGA 60.483 50.000 0.30 0.00 0.00 2.15
2454 4379 1.867233 GCGCATACACTCACCCTTATG 59.133 52.381 0.30 0.00 0.00 1.90
2455 4380 1.538204 CGCGCATACACTCACCCTTAT 60.538 52.381 8.75 0.00 0.00 1.73
2456 4381 0.179121 CGCGCATACACTCACCCTTA 60.179 55.000 8.75 0.00 0.00 2.69
2457 4382 1.447838 CGCGCATACACTCACCCTT 60.448 57.895 8.75 0.00 0.00 3.95
2458 4383 2.184322 CGCGCATACACTCACCCT 59.816 61.111 8.75 0.00 0.00 4.34
2459 4384 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
2460 4385 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
2461 4386 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
2462 4387 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
2463 4388 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
2464 4389 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
2465 4390 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
2466 4391 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
2467 4392 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
2468 4393 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
2469 4394 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
2470 4395 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
2474 4399 0.159554 CGCAAGCGCTCATATACACG 59.840 55.000 12.06 2.00 35.30 4.49
2475 4400 1.190323 GACGCAAGCGCTCATATACAC 59.810 52.381 12.06 0.00 44.19 2.90
2476 4401 1.067060 AGACGCAAGCGCTCATATACA 59.933 47.619 12.06 0.00 44.19 2.29
2477 4402 1.453524 CAGACGCAAGCGCTCATATAC 59.546 52.381 12.06 1.00 44.19 1.47
2478 4403 1.067060 ACAGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
2479 4404 0.179100 ACAGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
2480 4405 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
2481 4406 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
2482 4407 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
2483 4408 0.179171 TAGTACAGACGCAAGCGCTC 60.179 55.000 12.06 11.06 44.19 5.03
2484 4409 0.456221 ATAGTACAGACGCAAGCGCT 59.544 50.000 15.09 2.64 44.19 5.92
2485 4410 0.572590 CATAGTACAGACGCAAGCGC 59.427 55.000 15.09 0.00 44.19 5.92
2486 4411 1.909376 ACATAGTACAGACGCAAGCG 58.091 50.000 13.50 13.50 46.03 4.68
2487 4412 3.250744 TGAACATAGTACAGACGCAAGC 58.749 45.455 0.00 0.00 45.62 4.01
2489 4414 4.457949 TCTCTGAACATAGTACAGACGCAA 59.542 41.667 0.00 0.00 36.04 4.85
2490 4415 4.007659 TCTCTGAACATAGTACAGACGCA 58.992 43.478 0.00 0.00 36.04 5.24
2491 4416 4.617808 TCTCTGAACATAGTACAGACGC 57.382 45.455 0.00 0.00 36.04 5.19
2492 4417 6.843208 TCTTTCTCTGAACATAGTACAGACG 58.157 40.000 0.00 0.00 36.04 4.18
2493 4418 8.046294 TCTCTTTCTCTGAACATAGTACAGAC 57.954 38.462 0.00 0.00 36.04 3.51
2494 4419 8.637196 TTCTCTTTCTCTGAACATAGTACAGA 57.363 34.615 0.00 0.00 38.16 3.41
2495 4420 9.134734 GTTTCTCTTTCTCTGAACATAGTACAG 57.865 37.037 0.00 0.00 0.00 2.74
2496 4421 8.088981 GGTTTCTCTTTCTCTGAACATAGTACA 58.911 37.037 0.00 0.00 0.00 2.90
2497 4422 8.308207 AGGTTTCTCTTTCTCTGAACATAGTAC 58.692 37.037 0.00 0.00 0.00 2.73
2498 4423 8.423906 AGGTTTCTCTTTCTCTGAACATAGTA 57.576 34.615 0.00 0.00 0.00 1.82
2499 4424 7.309770 AGGTTTCTCTTTCTCTGAACATAGT 57.690 36.000 0.00 0.00 0.00 2.12
2500 4425 8.614469 AAAGGTTTCTCTTTCTCTGAACATAG 57.386 34.615 0.00 0.00 32.01 2.23
2501 4426 8.980481 AAAAGGTTTCTCTTTCTCTGAACATA 57.020 30.769 0.00 0.00 36.09 2.29
2502 4427 7.557719 TGAAAAGGTTTCTCTTTCTCTGAACAT 59.442 33.333 2.68 0.00 36.09 2.71
2503 4428 6.884295 TGAAAAGGTTTCTCTTTCTCTGAACA 59.116 34.615 2.68 0.00 36.09 3.18
2504 4429 7.281100 TCTGAAAAGGTTTCTCTTTCTCTGAAC 59.719 37.037 2.68 0.00 36.09 3.18
2505 4430 7.338710 TCTGAAAAGGTTTCTCTTTCTCTGAA 58.661 34.615 2.68 0.00 36.09 3.02
2506 4431 6.889198 TCTGAAAAGGTTTCTCTTTCTCTGA 58.111 36.000 2.68 0.00 36.09 3.27
2507 4432 7.742556 ATCTGAAAAGGTTTCTCTTTCTCTG 57.257 36.000 2.68 0.00 36.09 3.35
2508 4433 8.759481 AAATCTGAAAAGGTTTCTCTTTCTCT 57.241 30.769 2.68 0.00 36.09 3.10
2509 4434 9.809096 AAAAATCTGAAAAGGTTTCTCTTTCTC 57.191 29.630 2.68 0.00 36.09 2.87
2510 4435 9.591792 CAAAAATCTGAAAAGGTTTCTCTTTCT 57.408 29.630 2.68 0.00 36.09 2.52
2511 4436 9.586435 TCAAAAATCTGAAAAGGTTTCTCTTTC 57.414 29.630 2.68 0.00 36.09 2.62
2512 4437 9.942850 TTCAAAAATCTGAAAAGGTTTCTCTTT 57.057 25.926 2.68 0.00 38.48 2.52
2513 4438 9.942850 TTTCAAAAATCTGAAAAGGTTTCTCTT 57.057 25.926 2.68 0.00 41.25 2.85
2514 4439 9.942850 TTTTCAAAAATCTGAAAAGGTTTCTCT 57.057 25.926 7.27 0.00 45.71 3.10
2525 4450 9.467258 CATGCTTAGAGTTTTCAAAAATCTGAA 57.533 29.630 20.51 10.92 33.48 3.02
2526 4451 8.849168 TCATGCTTAGAGTTTTCAAAAATCTGA 58.151 29.630 20.51 12.79 0.00 3.27
2527 4452 9.635520 ATCATGCTTAGAGTTTTCAAAAATCTG 57.364 29.630 20.51 7.95 0.00 2.90
2531 4456 9.814899 TGAAATCATGCTTAGAGTTTTCAAAAA 57.185 25.926 0.00 0.00 30.98 1.94
2532 4457 9.985730 ATGAAATCATGCTTAGAGTTTTCAAAA 57.014 25.926 0.00 0.00 35.84 2.44
2533 4458 9.985730 AATGAAATCATGCTTAGAGTTTTCAAA 57.014 25.926 0.00 0.00 35.84 2.69
2534 4459 9.985730 AAATGAAATCATGCTTAGAGTTTTCAA 57.014 25.926 0.00 0.00 35.84 2.69
2535 4460 9.985730 AAAATGAAATCATGCTTAGAGTTTTCA 57.014 25.926 0.00 0.00 36.56 2.69
2540 4465 9.236006 ACACTAAAATGAAATCATGCTTAGAGT 57.764 29.630 21.08 18.09 36.75 3.24
2553 4478 9.932699 TTCGACGATTTTTACACTAAAATGAAA 57.067 25.926 0.00 0.00 37.72 2.69
2554 4479 9.932699 TTTCGACGATTTTTACACTAAAATGAA 57.067 25.926 0.00 0.00 37.72 2.57
2555 4480 9.932699 TTTTCGACGATTTTTACACTAAAATGA 57.067 25.926 0.00 0.00 37.72 2.57
2559 4484 9.719279 ACAATTTTCGACGATTTTTACACTAAA 57.281 25.926 0.00 0.00 0.00 1.85
2560 4485 9.372541 GACAATTTTCGACGATTTTTACACTAA 57.627 29.630 0.00 0.00 0.00 2.24
2561 4486 8.549548 TGACAATTTTCGACGATTTTTACACTA 58.450 29.630 0.00 0.00 0.00 2.74
2562 4487 7.375017 GTGACAATTTTCGACGATTTTTACACT 59.625 33.333 0.00 0.00 0.00 3.55
2563 4488 7.356962 GGTGACAATTTTCGACGATTTTTACAC 60.357 37.037 0.00 4.89 0.00 2.90
2564 4489 6.633634 GGTGACAATTTTCGACGATTTTTACA 59.366 34.615 0.00 0.00 0.00 2.41
2565 4490 6.854381 AGGTGACAATTTTCGACGATTTTTAC 59.146 34.615 0.00 0.00 0.00 2.01
2566 4491 6.853872 CAGGTGACAATTTTCGACGATTTTTA 59.146 34.615 0.00 0.00 0.00 1.52
2567 4492 5.685511 CAGGTGACAATTTTCGACGATTTTT 59.314 36.000 0.00 0.00 0.00 1.94
2568 4493 5.212194 CAGGTGACAATTTTCGACGATTTT 58.788 37.500 0.00 0.00 0.00 1.82
2569 4494 4.274950 ACAGGTGACAATTTTCGACGATTT 59.725 37.500 0.00 0.00 0.00 2.17
2570 4495 3.813166 ACAGGTGACAATTTTCGACGATT 59.187 39.130 0.00 0.00 0.00 3.34
2571 4496 3.399330 ACAGGTGACAATTTTCGACGAT 58.601 40.909 0.00 0.00 0.00 3.73
2572 4497 2.828877 ACAGGTGACAATTTTCGACGA 58.171 42.857 0.00 0.00 0.00 4.20
2573 4498 3.288242 CAACAGGTGACAATTTTCGACG 58.712 45.455 0.00 0.00 0.00 5.12
2574 4499 3.314080 TCCAACAGGTGACAATTTTCGAC 59.686 43.478 0.00 0.00 0.00 4.20
2575 4500 3.546724 TCCAACAGGTGACAATTTTCGA 58.453 40.909 0.00 0.00 0.00 3.71
2576 4501 3.980646 TCCAACAGGTGACAATTTTCG 57.019 42.857 0.00 0.00 0.00 3.46
2577 4502 5.712152 AGATCCAACAGGTGACAATTTTC 57.288 39.130 0.00 0.00 0.00 2.29
2578 4503 6.431234 GTCTAGATCCAACAGGTGACAATTTT 59.569 38.462 0.00 0.00 0.00 1.82
2579 4504 5.940470 GTCTAGATCCAACAGGTGACAATTT 59.060 40.000 0.00 0.00 0.00 1.82
2580 4505 5.249393 AGTCTAGATCCAACAGGTGACAATT 59.751 40.000 0.00 0.00 0.00 2.32
2581 4506 4.780021 AGTCTAGATCCAACAGGTGACAAT 59.220 41.667 0.00 0.00 0.00 2.71
2582 4507 4.021104 CAGTCTAGATCCAACAGGTGACAA 60.021 45.833 0.00 0.00 0.00 3.18
2583 4508 3.511540 CAGTCTAGATCCAACAGGTGACA 59.488 47.826 0.00 0.00 0.00 3.58
2584 4509 3.511934 ACAGTCTAGATCCAACAGGTGAC 59.488 47.826 0.00 0.00 0.00 3.67
2585 4510 3.511540 CACAGTCTAGATCCAACAGGTGA 59.488 47.826 0.00 0.00 0.00 4.02
2586 4511 3.259374 ACACAGTCTAGATCCAACAGGTG 59.741 47.826 0.00 0.00 0.00 4.00
2587 4512 3.259374 CACACAGTCTAGATCCAACAGGT 59.741 47.826 0.00 0.00 0.00 4.00
2588 4513 3.854666 CACACAGTCTAGATCCAACAGG 58.145 50.000 0.00 0.00 0.00 4.00
2589 4514 3.257393 GCACACAGTCTAGATCCAACAG 58.743 50.000 0.00 0.00 0.00 3.16
2590 4515 2.028112 GGCACACAGTCTAGATCCAACA 60.028 50.000 0.00 0.00 0.00 3.33
2591 4516 2.234908 AGGCACACAGTCTAGATCCAAC 59.765 50.000 0.00 0.00 0.00 3.77
2592 4517 2.497675 GAGGCACACAGTCTAGATCCAA 59.502 50.000 0.00 0.00 27.31 3.53
2593 4518 2.103373 GAGGCACACAGTCTAGATCCA 58.897 52.381 0.00 0.00 27.31 3.41
2594 4519 2.383855 AGAGGCACACAGTCTAGATCC 58.616 52.381 0.00 0.00 27.31 3.36
2595 4520 3.568007 CCTAGAGGCACACAGTCTAGATC 59.432 52.174 0.00 0.00 41.59 2.75
2596 4521 3.561143 CCTAGAGGCACACAGTCTAGAT 58.439 50.000 0.00 0.00 41.59 1.98
2597 4522 2.357257 CCCTAGAGGCACACAGTCTAGA 60.357 54.545 7.10 0.00 41.59 2.43
2598 4523 2.028130 CCCTAGAGGCACACAGTCTAG 58.972 57.143 0.00 0.00 39.63 2.43
2599 4524 1.342076 CCCCTAGAGGCACACAGTCTA 60.342 57.143 0.00 0.00 27.31 2.59
2600 4525 0.616111 CCCCTAGAGGCACACAGTCT 60.616 60.000 0.00 0.00 32.36 3.24
2601 4526 1.901085 CCCCTAGAGGCACACAGTC 59.099 63.158 0.00 0.00 0.00 3.51
2602 4527 4.136978 CCCCTAGAGGCACACAGT 57.863 61.111 0.00 0.00 0.00 3.55
2610 4535 3.148279 AGCGAACGCCCCTAGAGG 61.148 66.667 15.44 0.00 43.17 3.69
2611 4536 2.105128 CAGCGAACGCCCCTAGAG 59.895 66.667 15.44 0.00 43.17 2.43
2612 4537 3.458163 CCAGCGAACGCCCCTAGA 61.458 66.667 15.44 0.00 43.17 2.43
2618 4543 3.567797 GAGATGCCAGCGAACGCC 61.568 66.667 15.44 1.52 43.17 5.68
2619 4544 2.815211 TGAGATGCCAGCGAACGC 60.815 61.111 11.31 11.31 42.33 4.84
2620 4545 2.456119 GGTGAGATGCCAGCGAACG 61.456 63.158 0.00 0.00 0.00 3.95
2621 4546 2.109126 GGGTGAGATGCCAGCGAAC 61.109 63.158 0.00 0.00 35.54 3.95
2622 4547 2.268920 GGGTGAGATGCCAGCGAA 59.731 61.111 0.00 0.00 35.54 4.70
2623 4548 3.002583 TGGGTGAGATGCCAGCGA 61.003 61.111 0.00 0.00 35.54 4.93
2624 4549 2.821366 GTGGGTGAGATGCCAGCG 60.821 66.667 0.00 0.00 35.54 5.18
2625 4550 2.821366 CGTGGGTGAGATGCCAGC 60.821 66.667 0.00 0.00 0.00 4.85
2626 4551 2.124983 CCGTGGGTGAGATGCCAG 60.125 66.667 0.00 0.00 0.00 4.85
2627 4552 2.927856 ACCGTGGGTGAGATGCCA 60.928 61.111 0.00 0.00 32.98 4.92
2644 4569 0.111061 AGCTGCCTGGTGAATGTTCA 59.889 50.000 0.00 0.00 34.20 3.18
2645 4570 1.251251 AAGCTGCCTGGTGAATGTTC 58.749 50.000 0.00 0.00 0.00 3.18
2646 4571 1.708341 AAAGCTGCCTGGTGAATGTT 58.292 45.000 0.00 0.00 0.00 2.71
2647 4572 3.444850 AAAGCTGCCTGGTGAATGT 57.555 47.368 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.