Multiple sequence alignment - TraesCS3D01G296400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G296400 chr3D 100.000 4020 0 0 1 4020 410316436 410320455 0.000000e+00 7424
1 TraesCS3D01G296400 chr3D 91.408 419 33 3 3282 3697 562173142 562172724 4.510000e-159 571
2 TraesCS3D01G296400 chr3A 92.985 2894 85 45 457 3266 541367928 541365069 0.000000e+00 4111
3 TraesCS3D01G296400 chr3A 90.647 139 8 2 3697 3835 541292906 541292773 3.190000e-41 180
4 TraesCS3D01G296400 chr3B 92.735 2340 79 39 285 2584 536069499 536071787 0.000000e+00 3295
5 TraesCS3D01G296400 chr3B 95.400 587 15 5 2641 3227 536071930 536072504 0.000000e+00 924
6 TraesCS3D01G296400 chr3B 91.667 420 32 3 3280 3697 654151243 654151661 2.690000e-161 579
7 TraesCS3D01G296400 chr3B 94.675 169 3 2 3697 3860 536072800 536072967 1.430000e-64 257
8 TraesCS3D01G296400 chr5B 91.686 421 32 3 3279 3697 61650316 61649897 7.490000e-162 580
9 TraesCS3D01G296400 chr5B 91.449 421 32 4 3280 3697 456310959 456310540 3.480000e-160 575
10 TraesCS3D01G296400 chr4B 90.888 428 36 3 3279 3703 468237313 468236886 4.510000e-159 571
11 TraesCS3D01G296400 chr4B 90.780 423 36 3 3278 3697 90454820 90455242 2.710000e-156 562
12 TraesCS3D01G296400 chr4B 90.952 420 35 3 3280 3697 633957528 633957946 2.710000e-156 562
13 TraesCS3D01G296400 chr6D 91.388 418 32 4 3282 3698 392517338 392516924 1.620000e-158 569
14 TraesCS3D01G296400 chr4A 90.974 421 35 3 3280 3697 577369225 577368805 7.540000e-157 564
15 TraesCS3D01G296400 chr4A 74.837 306 60 9 19 309 483386795 483386492 5.460000e-24 122
16 TraesCS3D01G296400 chr5D 94.079 152 9 0 3869 4020 162443927 162444078 8.690000e-57 231
17 TraesCS3D01G296400 chr1B 87.857 140 17 0 3869 4008 453477105 453477244 8.940000e-37 165
18 TraesCS3D01G296400 chr1B 84.211 152 24 0 3869 4020 162791809 162791658 9.000000e-32 148
19 TraesCS3D01G296400 chr5A 78.037 214 39 6 94 302 501883046 501882836 1.170000e-25 128
20 TraesCS3D01G296400 chr4D 78.469 209 31 8 12 207 490943616 490943409 1.520000e-24 124
21 TraesCS3D01G296400 chr6A 76.293 232 48 6 95 321 604499536 604499307 2.540000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G296400 chr3D 410316436 410320455 4019 False 7424 7424 100.000 1 4020 1 chr3D.!!$F1 4019
1 TraesCS3D01G296400 chr3A 541365069 541367928 2859 True 4111 4111 92.985 457 3266 1 chr3A.!!$R2 2809
2 TraesCS3D01G296400 chr3B 536069499 536072967 3468 False 1492 3295 94.270 285 3860 3 chr3B.!!$F2 3575

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.106519 ATGCTAGCCTTCCGCCAATT 60.107 50.0 13.29 0.0 38.78 2.32 F
169 170 0.109272 GATGTTCGGACTCGTGCAGA 60.109 55.0 0.00 0.0 37.69 4.26 F
981 997 0.171455 TGCGTGCCGTTTTGAAGTTT 59.829 45.0 0.00 0.0 0.00 2.66 F
2218 2300 0.710567 CGACACGAAGCTAGCTGTTG 59.289 55.0 20.16 17.3 0.00 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1884 1945 0.680061 GGCGTCCAGGTAATCCTAGG 59.320 60.000 0.82 0.82 43.07 3.02 R
2163 2237 9.716531 GATGAAGATGATGGTATTCATAGTTCA 57.283 33.333 11.25 11.25 39.41 3.18 R
2734 2930 0.948623 TGGACATGACGTTGAAGGCG 60.949 55.000 0.00 0.00 0.00 5.52 R
3981 4438 0.036875 AAAGGACGGAGGCCAAAGAG 59.963 55.000 5.01 0.00 0.00 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.748132 TGCCTAAATATATTTGCAAGCTTCC 58.252 36.000 18.98 0.00 29.36 3.46
26 27 5.858581 GCCTAAATATATTTGCAAGCTTCCG 59.141 40.000 18.98 0.00 0.00 4.30
27 28 5.858581 CCTAAATATATTTGCAAGCTTCCGC 59.141 40.000 18.98 0.00 0.00 5.54
28 29 3.923017 ATATATTTGCAAGCTTCCGCC 57.077 42.857 0.00 0.00 36.60 6.13
29 30 1.473258 ATATTTGCAAGCTTCCGCCA 58.527 45.000 0.00 0.00 36.60 5.69
30 31 1.252175 TATTTGCAAGCTTCCGCCAA 58.748 45.000 0.00 0.00 36.60 4.52
31 32 0.392336 ATTTGCAAGCTTCCGCCAAA 59.608 45.000 0.00 4.87 36.60 3.28
32 33 0.392336 TTTGCAAGCTTCCGCCAAAT 59.608 45.000 0.00 0.00 36.60 2.32
33 34 0.319727 TTGCAAGCTTCCGCCAAATG 60.320 50.000 0.00 0.00 36.60 2.32
34 35 2.096442 GCAAGCTTCCGCCAAATGC 61.096 57.895 0.00 0.00 36.60 3.56
35 36 1.446618 CAAGCTTCCGCCAAATGCC 60.447 57.895 0.00 0.00 36.60 4.40
36 37 1.607467 AAGCTTCCGCCAAATGCCT 60.607 52.632 0.00 0.00 36.60 4.75
37 38 0.323360 AAGCTTCCGCCAAATGCCTA 60.323 50.000 0.00 0.00 36.60 3.93
38 39 0.323360 AGCTTCCGCCAAATGCCTAA 60.323 50.000 0.00 0.00 36.60 2.69
39 40 0.530288 GCTTCCGCCAAATGCCTAAA 59.470 50.000 0.00 0.00 36.24 1.85
40 41 1.136891 GCTTCCGCCAAATGCCTAAAT 59.863 47.619 0.00 0.00 36.24 1.40
41 42 2.360801 GCTTCCGCCAAATGCCTAAATA 59.639 45.455 0.00 0.00 36.24 1.40
42 43 3.795488 GCTTCCGCCAAATGCCTAAATAC 60.795 47.826 0.00 0.00 36.24 1.89
43 44 3.290948 TCCGCCAAATGCCTAAATACT 57.709 42.857 0.00 0.00 36.24 2.12
44 45 4.425180 TCCGCCAAATGCCTAAATACTA 57.575 40.909 0.00 0.00 36.24 1.82
45 46 4.783055 TCCGCCAAATGCCTAAATACTAA 58.217 39.130 0.00 0.00 36.24 2.24
46 47 5.381757 TCCGCCAAATGCCTAAATACTAAT 58.618 37.500 0.00 0.00 36.24 1.73
47 48 5.472137 TCCGCCAAATGCCTAAATACTAATC 59.528 40.000 0.00 0.00 36.24 1.75
48 49 5.240623 CCGCCAAATGCCTAAATACTAATCA 59.759 40.000 0.00 0.00 36.24 2.57
49 50 6.142817 CGCCAAATGCCTAAATACTAATCAC 58.857 40.000 0.00 0.00 36.24 3.06
50 51 6.238621 CGCCAAATGCCTAAATACTAATCACA 60.239 38.462 0.00 0.00 36.24 3.58
51 52 7.488322 GCCAAATGCCTAAATACTAATCACAA 58.512 34.615 0.00 0.00 0.00 3.33
52 53 8.143835 GCCAAATGCCTAAATACTAATCACAAT 58.856 33.333 0.00 0.00 0.00 2.71
53 54 9.683069 CCAAATGCCTAAATACTAATCACAATC 57.317 33.333 0.00 0.00 0.00 2.67
56 57 8.627208 ATGCCTAAATACTAATCACAATCTGG 57.373 34.615 0.00 0.00 0.00 3.86
57 58 6.486657 TGCCTAAATACTAATCACAATCTGGC 59.513 38.462 0.00 0.00 0.00 4.85
58 59 6.712547 GCCTAAATACTAATCACAATCTGGCT 59.287 38.462 0.00 0.00 0.00 4.75
59 60 7.229506 GCCTAAATACTAATCACAATCTGGCTT 59.770 37.037 0.00 0.00 0.00 4.35
60 61 9.125026 CCTAAATACTAATCACAATCTGGCTTT 57.875 33.333 0.00 0.00 0.00 3.51
65 66 7.759489 ACTAATCACAATCTGGCTTTTAACA 57.241 32.000 0.00 0.00 0.00 2.41
66 67 8.353423 ACTAATCACAATCTGGCTTTTAACAT 57.647 30.769 0.00 0.00 0.00 2.71
67 68 8.246180 ACTAATCACAATCTGGCTTTTAACATG 58.754 33.333 0.00 0.00 0.00 3.21
68 69 4.808558 TCACAATCTGGCTTTTAACATGC 58.191 39.130 0.00 0.00 0.00 4.06
69 70 4.523943 TCACAATCTGGCTTTTAACATGCT 59.476 37.500 0.00 0.00 0.00 3.79
70 71 5.709631 TCACAATCTGGCTTTTAACATGCTA 59.290 36.000 0.00 0.00 0.00 3.49
71 72 6.032094 CACAATCTGGCTTTTAACATGCTAG 58.968 40.000 0.00 0.00 35.95 3.42
72 73 4.907879 ATCTGGCTTTTAACATGCTAGC 57.092 40.909 8.10 8.10 34.96 3.42
76 77 4.033990 GGCTTTTAACATGCTAGCCTTC 57.966 45.455 13.29 0.00 46.14 3.46
77 78 3.181486 GGCTTTTAACATGCTAGCCTTCC 60.181 47.826 13.29 0.00 46.14 3.46
78 79 3.487544 GCTTTTAACATGCTAGCCTTCCG 60.488 47.826 13.29 0.00 0.00 4.30
79 80 1.663695 TTAACATGCTAGCCTTCCGC 58.336 50.000 13.29 0.00 37.98 5.54
80 81 0.179056 TAACATGCTAGCCTTCCGCC 60.179 55.000 13.29 0.00 38.78 6.13
81 82 2.190313 CATGCTAGCCTTCCGCCA 59.810 61.111 13.29 0.00 38.78 5.69
82 83 1.451927 CATGCTAGCCTTCCGCCAA 60.452 57.895 13.29 0.00 38.78 4.52
83 84 0.820891 CATGCTAGCCTTCCGCCAAT 60.821 55.000 13.29 0.00 38.78 3.16
84 85 0.106519 ATGCTAGCCTTCCGCCAATT 60.107 50.000 13.29 0.00 38.78 2.32
85 86 0.544223 TGCTAGCCTTCCGCCAATTA 59.456 50.000 13.29 0.00 38.78 1.40
86 87 1.065053 TGCTAGCCTTCCGCCAATTAA 60.065 47.619 13.29 0.00 38.78 1.40
87 88 1.333931 GCTAGCCTTCCGCCAATTAAC 59.666 52.381 2.29 0.00 38.78 2.01
88 89 2.919228 CTAGCCTTCCGCCAATTAACT 58.081 47.619 0.00 0.00 38.78 2.24
89 90 3.743269 GCTAGCCTTCCGCCAATTAACTA 60.743 47.826 2.29 0.00 38.78 2.24
90 91 2.919228 AGCCTTCCGCCAATTAACTAG 58.081 47.619 0.00 0.00 38.78 2.57
91 92 1.333931 GCCTTCCGCCAATTAACTAGC 59.666 52.381 0.00 0.00 0.00 3.42
95 96 1.647084 CGCCAATTAACTAGCGGCC 59.353 57.895 0.00 0.00 44.64 6.13
96 97 0.814010 CGCCAATTAACTAGCGGCCT 60.814 55.000 0.00 0.00 44.64 5.19
97 98 1.389555 GCCAATTAACTAGCGGCCTT 58.610 50.000 0.00 0.00 36.73 4.35
98 99 1.333931 GCCAATTAACTAGCGGCCTTC 59.666 52.381 0.00 0.00 36.73 3.46
99 100 1.947456 CCAATTAACTAGCGGCCTTCC 59.053 52.381 0.00 0.00 0.00 3.46
110 111 3.202706 GCCTTCCGCCATCCGAAC 61.203 66.667 0.00 0.00 40.02 3.95
111 112 2.890474 CCTTCCGCCATCCGAACG 60.890 66.667 0.00 0.00 40.02 3.95
112 113 2.183300 CTTCCGCCATCCGAACGA 59.817 61.111 0.00 0.00 40.02 3.85
113 114 1.447140 CTTCCGCCATCCGAACGAA 60.447 57.895 0.00 0.00 40.02 3.85
114 115 1.421410 CTTCCGCCATCCGAACGAAG 61.421 60.000 0.00 0.00 40.02 3.79
115 116 1.879737 TTCCGCCATCCGAACGAAGA 61.880 55.000 0.00 0.00 40.02 2.87
116 117 1.878522 CCGCCATCCGAACGAAGAG 60.879 63.158 0.00 0.00 40.02 2.85
117 118 1.878522 CGCCATCCGAACGAAGAGG 60.879 63.158 0.00 0.00 40.02 3.69
118 119 1.218316 GCCATCCGAACGAAGAGGT 59.782 57.895 0.00 0.00 0.00 3.85
119 120 1.084370 GCCATCCGAACGAAGAGGTG 61.084 60.000 0.00 0.00 0.00 4.00
120 121 0.460284 CCATCCGAACGAAGAGGTGG 60.460 60.000 0.00 0.00 0.00 4.61
121 122 0.460284 CATCCGAACGAAGAGGTGGG 60.460 60.000 0.00 0.00 0.00 4.61
122 123 1.614241 ATCCGAACGAAGAGGTGGGG 61.614 60.000 0.00 0.00 0.00 4.96
123 124 2.580601 CCGAACGAAGAGGTGGGGT 61.581 63.158 0.00 0.00 0.00 4.95
124 125 1.252904 CCGAACGAAGAGGTGGGGTA 61.253 60.000 0.00 0.00 0.00 3.69
125 126 0.172803 CGAACGAAGAGGTGGGGTAG 59.827 60.000 0.00 0.00 0.00 3.18
126 127 1.264295 GAACGAAGAGGTGGGGTAGT 58.736 55.000 0.00 0.00 0.00 2.73
127 128 0.974383 AACGAAGAGGTGGGGTAGTG 59.026 55.000 0.00 0.00 0.00 2.74
128 129 0.903454 ACGAAGAGGTGGGGTAGTGG 60.903 60.000 0.00 0.00 0.00 4.00
129 130 0.613853 CGAAGAGGTGGGGTAGTGGA 60.614 60.000 0.00 0.00 0.00 4.02
130 131 1.196012 GAAGAGGTGGGGTAGTGGAG 58.804 60.000 0.00 0.00 0.00 3.86
131 132 0.790993 AAGAGGTGGGGTAGTGGAGA 59.209 55.000 0.00 0.00 0.00 3.71
132 133 1.019650 AGAGGTGGGGTAGTGGAGAT 58.980 55.000 0.00 0.00 0.00 2.75
133 134 1.366435 AGAGGTGGGGTAGTGGAGATT 59.634 52.381 0.00 0.00 0.00 2.40
134 135 2.197465 GAGGTGGGGTAGTGGAGATTT 58.803 52.381 0.00 0.00 0.00 2.17
135 136 2.576648 GAGGTGGGGTAGTGGAGATTTT 59.423 50.000 0.00 0.00 0.00 1.82
136 137 2.993863 AGGTGGGGTAGTGGAGATTTTT 59.006 45.455 0.00 0.00 0.00 1.94
137 138 3.089284 GGTGGGGTAGTGGAGATTTTTG 58.911 50.000 0.00 0.00 0.00 2.44
138 139 3.089284 GTGGGGTAGTGGAGATTTTTGG 58.911 50.000 0.00 0.00 0.00 3.28
139 140 2.719705 TGGGGTAGTGGAGATTTTTGGT 59.280 45.455 0.00 0.00 0.00 3.67
140 141 3.141272 TGGGGTAGTGGAGATTTTTGGTT 59.859 43.478 0.00 0.00 0.00 3.67
141 142 4.157246 GGGGTAGTGGAGATTTTTGGTTT 58.843 43.478 0.00 0.00 0.00 3.27
142 143 4.021456 GGGGTAGTGGAGATTTTTGGTTTG 60.021 45.833 0.00 0.00 0.00 2.93
143 144 4.587262 GGGTAGTGGAGATTTTTGGTTTGT 59.413 41.667 0.00 0.00 0.00 2.83
144 145 5.278808 GGGTAGTGGAGATTTTTGGTTTGTC 60.279 44.000 0.00 0.00 0.00 3.18
145 146 5.300792 GGTAGTGGAGATTTTTGGTTTGTCA 59.699 40.000 0.00 0.00 0.00 3.58
146 147 6.015434 GGTAGTGGAGATTTTTGGTTTGTCAT 60.015 38.462 0.00 0.00 0.00 3.06
147 148 5.846203 AGTGGAGATTTTTGGTTTGTCATG 58.154 37.500 0.00 0.00 0.00 3.07
148 149 5.598005 AGTGGAGATTTTTGGTTTGTCATGA 59.402 36.000 0.00 0.00 0.00 3.07
149 150 5.922544 GTGGAGATTTTTGGTTTGTCATGAG 59.077 40.000 0.00 0.00 0.00 2.90
150 151 5.010922 TGGAGATTTTTGGTTTGTCATGAGG 59.989 40.000 0.00 0.00 0.00 3.86
151 152 5.243730 GGAGATTTTTGGTTTGTCATGAGGA 59.756 40.000 0.00 0.00 0.00 3.71
152 153 6.071165 GGAGATTTTTGGTTTGTCATGAGGAT 60.071 38.462 0.00 0.00 0.00 3.24
153 154 6.694447 AGATTTTTGGTTTGTCATGAGGATG 58.306 36.000 0.00 0.00 0.00 3.51
154 155 5.867903 TTTTTGGTTTGTCATGAGGATGT 57.132 34.783 0.00 0.00 0.00 3.06
155 156 5.867903 TTTTGGTTTGTCATGAGGATGTT 57.132 34.783 0.00 0.00 0.00 2.71
156 157 5.452078 TTTGGTTTGTCATGAGGATGTTC 57.548 39.130 0.00 0.00 0.00 3.18
157 158 3.073678 TGGTTTGTCATGAGGATGTTCG 58.926 45.455 0.00 0.00 0.00 3.95
158 159 2.420022 GGTTTGTCATGAGGATGTTCGG 59.580 50.000 0.00 0.00 0.00 4.30
159 160 3.334691 GTTTGTCATGAGGATGTTCGGA 58.665 45.455 0.00 0.00 0.00 4.55
160 161 2.672961 TGTCATGAGGATGTTCGGAC 57.327 50.000 0.00 0.00 0.00 4.79
161 162 2.179427 TGTCATGAGGATGTTCGGACT 58.821 47.619 0.00 0.00 0.00 3.85
162 163 2.166459 TGTCATGAGGATGTTCGGACTC 59.834 50.000 0.00 0.00 0.00 3.36
163 164 1.405463 TCATGAGGATGTTCGGACTCG 59.595 52.381 0.00 0.00 32.76 4.18
164 165 1.135139 CATGAGGATGTTCGGACTCGT 59.865 52.381 0.00 0.00 37.69 4.18
165 166 0.526211 TGAGGATGTTCGGACTCGTG 59.474 55.000 0.00 0.00 37.69 4.35
166 167 0.802607 GAGGATGTTCGGACTCGTGC 60.803 60.000 0.00 0.00 37.69 5.34
167 168 1.080093 GGATGTTCGGACTCGTGCA 60.080 57.895 0.00 0.00 37.69 4.57
168 169 1.078759 GGATGTTCGGACTCGTGCAG 61.079 60.000 0.00 0.00 37.69 4.41
169 170 0.109272 GATGTTCGGACTCGTGCAGA 60.109 55.000 0.00 0.00 37.69 4.26
177 178 3.385384 CTCGTGCAGAGCTCCCCA 61.385 66.667 10.93 4.83 40.54 4.96
178 179 3.655810 CTCGTGCAGAGCTCCCCAC 62.656 68.421 19.24 19.24 40.54 4.61
179 180 4.007644 CGTGCAGAGCTCCCCACA 62.008 66.667 25.16 11.79 0.00 4.17
180 181 2.673523 GTGCAGAGCTCCCCACAT 59.326 61.111 22.51 0.00 0.00 3.21
181 182 1.001641 GTGCAGAGCTCCCCACATT 60.002 57.895 22.51 0.00 0.00 2.71
182 183 0.610232 GTGCAGAGCTCCCCACATTT 60.610 55.000 22.51 0.00 0.00 2.32
183 184 0.609957 TGCAGAGCTCCCCACATTTG 60.610 55.000 10.93 0.01 0.00 2.32
184 185 0.610232 GCAGAGCTCCCCACATTTGT 60.610 55.000 10.93 0.00 0.00 2.83
185 186 1.457346 CAGAGCTCCCCACATTTGTC 58.543 55.000 10.93 0.00 0.00 3.18
186 187 1.004044 CAGAGCTCCCCACATTTGTCT 59.996 52.381 10.93 0.00 0.00 3.41
187 188 1.280421 AGAGCTCCCCACATTTGTCTC 59.720 52.381 10.93 0.00 0.00 3.36
188 189 0.329596 AGCTCCCCACATTTGTCTCC 59.670 55.000 0.00 0.00 0.00 3.71
189 190 1.026718 GCTCCCCACATTTGTCTCCG 61.027 60.000 0.00 0.00 0.00 4.63
190 191 0.392998 CTCCCCACATTTGTCTCCGG 60.393 60.000 0.00 0.00 0.00 5.14
191 192 1.131303 TCCCCACATTTGTCTCCGGT 61.131 55.000 0.00 0.00 0.00 5.28
192 193 0.251165 CCCCACATTTGTCTCCGGTT 60.251 55.000 0.00 0.00 0.00 4.44
193 194 1.616159 CCCACATTTGTCTCCGGTTT 58.384 50.000 0.00 0.00 0.00 3.27
194 195 1.269448 CCCACATTTGTCTCCGGTTTG 59.731 52.381 0.00 0.00 0.00 2.93
195 196 1.335872 CCACATTTGTCTCCGGTTTGC 60.336 52.381 0.00 0.00 0.00 3.68
196 197 1.336440 CACATTTGTCTCCGGTTTGCA 59.664 47.619 0.00 0.00 0.00 4.08
197 198 2.030007 CACATTTGTCTCCGGTTTGCAT 60.030 45.455 0.00 0.00 0.00 3.96
198 199 2.030007 ACATTTGTCTCCGGTTTGCATG 60.030 45.455 0.00 1.06 0.00 4.06
199 200 1.974265 TTTGTCTCCGGTTTGCATGA 58.026 45.000 0.00 0.00 0.00 3.07
200 201 1.974265 TTGTCTCCGGTTTGCATGAA 58.026 45.000 0.00 0.00 0.00 2.57
201 202 1.974265 TGTCTCCGGTTTGCATGAAA 58.026 45.000 0.00 0.00 0.00 2.69
202 203 2.302260 TGTCTCCGGTTTGCATGAAAA 58.698 42.857 0.00 0.00 0.00 2.29
203 204 2.690497 TGTCTCCGGTTTGCATGAAAAA 59.310 40.909 0.00 0.00 0.00 1.94
222 223 5.895216 AAAAACACGTCTAAACTACTCGG 57.105 39.130 0.00 0.00 0.00 4.63
223 224 2.626088 ACACGTCTAAACTACTCGGC 57.374 50.000 0.00 0.00 0.00 5.54
224 225 1.881973 ACACGTCTAAACTACTCGGCA 59.118 47.619 0.00 0.00 0.00 5.69
225 226 2.095364 ACACGTCTAAACTACTCGGCAG 60.095 50.000 0.00 0.00 0.00 4.85
226 227 2.161012 CACGTCTAAACTACTCGGCAGA 59.839 50.000 0.00 0.00 0.00 4.26
227 228 2.161211 ACGTCTAAACTACTCGGCAGAC 59.839 50.000 0.00 0.00 0.00 3.51
228 229 2.477525 CGTCTAAACTACTCGGCAGACC 60.478 54.545 0.00 0.00 30.91 3.85
243 244 2.540515 CAGACCGATACAAATCTGCGT 58.459 47.619 0.00 0.00 32.76 5.24
244 245 2.930040 CAGACCGATACAAATCTGCGTT 59.070 45.455 0.00 0.00 32.76 4.84
245 246 2.930040 AGACCGATACAAATCTGCGTTG 59.070 45.455 0.00 0.00 0.00 4.10
246 247 2.006888 ACCGATACAAATCTGCGTTGG 58.993 47.619 0.00 0.00 0.00 3.77
247 248 2.276201 CCGATACAAATCTGCGTTGGA 58.724 47.619 0.00 0.00 0.00 3.53
248 249 2.872245 CCGATACAAATCTGCGTTGGAT 59.128 45.455 0.00 0.00 31.96 3.41
249 250 3.303329 CCGATACAAATCTGCGTTGGATG 60.303 47.826 0.00 0.00 29.32 3.51
250 251 3.555547 CGATACAAATCTGCGTTGGATGA 59.444 43.478 0.00 0.00 29.32 2.92
251 252 4.550831 CGATACAAATCTGCGTTGGATGAC 60.551 45.833 0.00 0.00 29.32 3.06
252 253 2.503331 ACAAATCTGCGTTGGATGACA 58.497 42.857 0.00 0.00 0.00 3.58
253 254 2.884012 ACAAATCTGCGTTGGATGACAA 59.116 40.909 0.00 0.00 36.54 3.18
261 262 2.907431 TTGGATGACAACACGTCCG 58.093 52.632 0.00 0.00 45.78 4.79
262 263 1.225376 TTGGATGACAACACGTCCGC 61.225 55.000 0.00 0.00 45.78 5.54
263 264 1.666553 GGATGACAACACGTCCGCA 60.667 57.895 0.00 0.00 44.71 5.69
264 265 1.491563 GATGACAACACGTCCGCAC 59.508 57.895 0.00 0.00 44.71 5.34
265 266 1.218875 GATGACAACACGTCCGCACA 61.219 55.000 0.00 0.00 44.71 4.57
266 267 1.221466 ATGACAACACGTCCGCACAG 61.221 55.000 0.00 0.00 44.71 3.66
267 268 3.223435 GACAACACGTCCGCACAGC 62.223 63.158 0.00 0.00 38.85 4.40
268 269 3.268603 CAACACGTCCGCACAGCA 61.269 61.111 0.00 0.00 0.00 4.41
269 270 3.269347 AACACGTCCGCACAGCAC 61.269 61.111 0.00 0.00 0.00 4.40
307 308 1.883021 GGTTTGAGGGTCGGCATTG 59.117 57.895 0.00 0.00 0.00 2.82
312 313 2.035626 AGGGTCGGCATTGTTGGG 59.964 61.111 0.00 0.00 0.00 4.12
313 314 3.758931 GGGTCGGCATTGTTGGGC 61.759 66.667 0.00 0.00 0.00 5.36
356 357 2.706339 AATCTCCTACAGCCTGCAAG 57.294 50.000 0.00 0.00 0.00 4.01
362 363 2.028112 TCCTACAGCCTGCAAGTACAAG 60.028 50.000 0.00 0.00 0.00 3.16
376 378 5.181245 GCAAGTACAAGTTCTTATCTTGGCA 59.819 40.000 9.82 0.00 44.29 4.92
446 448 3.380479 TTGCCCCGTAGAATAGAATCG 57.620 47.619 0.00 0.00 0.00 3.34
575 587 2.113052 TCCCTAATTATACTCCCGGCCT 59.887 50.000 0.00 0.00 0.00 5.19
627 640 2.689034 CCCTCCGCCTTCTTCCCT 60.689 66.667 0.00 0.00 0.00 4.20
628 641 2.301738 CCCTCCGCCTTCTTCCCTT 61.302 63.158 0.00 0.00 0.00 3.95
776 789 3.908081 GCGCGTAATCCCTCCCGA 61.908 66.667 8.43 0.00 0.00 5.14
864 880 1.402720 GCTTTACAGGTACGTACGCCA 60.403 52.381 16.72 0.00 0.00 5.69
877 893 2.656897 CGTACGCCAGTATCATCAATCG 59.343 50.000 0.52 0.00 35.01 3.34
878 894 1.502231 ACGCCAGTATCATCAATCGC 58.498 50.000 0.00 0.00 0.00 4.58
879 895 1.202521 ACGCCAGTATCATCAATCGCA 60.203 47.619 0.00 0.00 0.00 5.10
917 933 0.883153 TTTGAGTACGCCTCGCTGTA 59.117 50.000 0.00 0.00 43.64 2.74
918 934 0.450583 TTGAGTACGCCTCGCTGTAG 59.549 55.000 0.00 0.00 43.64 2.74
919 935 0.675837 TGAGTACGCCTCGCTGTAGT 60.676 55.000 0.00 0.00 43.64 2.73
951 967 3.368948 CCTTGAGGAGAAAGCTAGGTCAC 60.369 52.174 0.00 0.00 37.39 3.67
963 979 5.065704 AGCTAGGTCACGAAGCATATATG 57.934 43.478 8.45 8.45 38.75 1.78
981 997 0.171455 TGCGTGCCGTTTTGAAGTTT 59.829 45.000 0.00 0.00 0.00 2.66
1146 1173 2.881074 CAGTCAAGATCGATCGGTTGT 58.119 47.619 19.33 3.48 0.00 3.32
1347 1386 4.650131 GTGACAACCTAGCTACCTTCCTAT 59.350 45.833 0.00 0.00 0.00 2.57
1399 1445 4.978083 ATCAAGTTGTTCTCATGCATCC 57.022 40.909 0.00 0.00 0.00 3.51
1429 1475 6.874288 TGAAAGGGTTGCAAATTAAAATGG 57.126 33.333 0.00 0.00 0.00 3.16
1439 1485 6.425504 TGCAAATTAAAATGGCAACGAAAAG 58.574 32.000 0.00 0.00 42.51 2.27
1440 1486 5.339348 GCAAATTAAAATGGCAACGAAAAGC 59.661 36.000 0.00 0.00 42.51 3.51
1441 1487 6.657888 CAAATTAAAATGGCAACGAAAAGCT 58.342 32.000 0.00 0.00 42.51 3.74
1442 1488 5.844301 ATTAAAATGGCAACGAAAAGCTG 57.156 34.783 0.00 0.00 42.51 4.24
1443 1489 3.451141 AAAATGGCAACGAAAAGCTGA 57.549 38.095 0.00 0.00 42.51 4.26
1444 1490 3.665745 AAATGGCAACGAAAAGCTGAT 57.334 38.095 0.00 0.00 42.51 2.90
1445 1491 4.782019 AAATGGCAACGAAAAGCTGATA 57.218 36.364 0.00 0.00 42.51 2.15
1447 1493 2.778299 TGGCAACGAAAAGCTGATAGT 58.222 42.857 0.00 0.00 42.51 2.12
1449 1495 4.320023 TGGCAACGAAAAGCTGATAGTTA 58.680 39.130 0.00 0.00 42.51 2.24
1452 1498 6.072175 TGGCAACGAAAAGCTGATAGTTAAAT 60.072 34.615 0.00 0.00 42.51 1.40
1677 1725 4.792068 TCTTCTTCTTCTTCTTTTGCCCA 58.208 39.130 0.00 0.00 0.00 5.36
1834 1894 1.302832 GGAGTCAACTGCCCACCTG 60.303 63.158 0.00 0.00 0.00 4.00
1847 1907 3.040147 CCCACCTGGCGTATAAGTATG 57.960 52.381 0.00 0.00 0.00 2.39
1849 1909 3.575256 CCCACCTGGCGTATAAGTATGTA 59.425 47.826 0.00 0.00 0.00 2.29
2163 2237 1.143183 CGCTGCCCAAGGTACGTAT 59.857 57.895 0.00 0.00 0.00 3.06
2218 2300 0.710567 CGACACGAAGCTAGCTGTTG 59.289 55.000 20.16 17.30 0.00 3.33
2219 2301 1.784525 GACACGAAGCTAGCTGTTGT 58.215 50.000 20.16 20.37 0.00 3.32
2220 2302 1.721926 GACACGAAGCTAGCTGTTGTC 59.278 52.381 25.86 25.86 0.00 3.18
2221 2303 1.341531 ACACGAAGCTAGCTGTTGTCT 59.658 47.619 20.16 0.00 0.00 3.41
2222 2304 1.989165 CACGAAGCTAGCTGTTGTCTC 59.011 52.381 20.16 9.94 0.00 3.36
2246 2352 8.060931 TCGTTGATATGAAAATGAAAATGGGA 57.939 30.769 0.00 0.00 0.00 4.37
2247 2353 7.973388 TCGTTGATATGAAAATGAAAATGGGAC 59.027 33.333 0.00 0.00 0.00 4.46
2248 2354 7.044117 CGTTGATATGAAAATGAAAATGGGACG 60.044 37.037 0.00 0.00 0.00 4.79
2249 2355 6.272318 TGATATGAAAATGAAAATGGGACGC 58.728 36.000 0.00 0.00 0.00 5.19
2471 2577 2.659610 GTCAGCCAGGAGAAGCGT 59.340 61.111 0.00 0.00 0.00 5.07
2585 2691 6.870439 AGATACAAGAAAACAGGGTACGTAAC 59.130 38.462 0.70 0.70 0.00 2.50
2611 2717 3.255149 ACGCAATATAACTACTCCCTCCG 59.745 47.826 0.00 0.00 0.00 4.63
2630 2739 3.192844 TCCGCTCCGATCCATATTACTTC 59.807 47.826 0.00 0.00 0.00 3.01
2632 2741 3.921021 CGCTCCGATCCATATTACTTCAC 59.079 47.826 0.00 0.00 0.00 3.18
2636 2745 6.479972 TCCGATCCATATTACTTCACTTGT 57.520 37.500 0.00 0.00 0.00 3.16
2637 2746 6.513180 TCCGATCCATATTACTTCACTTGTC 58.487 40.000 0.00 0.00 0.00 3.18
2638 2747 6.097696 TCCGATCCATATTACTTCACTTGTCA 59.902 38.462 0.00 0.00 0.00 3.58
2661 2852 8.040727 GTCATTAATTAATTTTCCTTGGCTGGT 58.959 33.333 8.01 0.00 0.00 4.00
2674 2865 4.673375 CTGGTTGGCTGGCTGGCT 62.673 66.667 18.27 0.00 42.34 4.75
3253 3705 7.914871 GTATAATGCATACAATTCTGTGCAACA 59.085 33.333 9.03 1.46 41.43 3.33
3270 3722 8.005192 TGTGCAACATATGAATAAATAAGGCA 57.995 30.769 10.38 0.00 45.67 4.75
3271 3723 8.136800 TGTGCAACATATGAATAAATAAGGCAG 58.863 33.333 10.38 0.00 45.67 4.85
3272 3724 8.352201 GTGCAACATATGAATAAATAAGGCAGA 58.648 33.333 10.38 0.00 36.32 4.26
3273 3725 8.911965 TGCAACATATGAATAAATAAGGCAGAA 58.088 29.630 10.38 0.00 0.00 3.02
3274 3726 9.748708 GCAACATATGAATAAATAAGGCAGAAA 57.251 29.630 10.38 0.00 0.00 2.52
3278 3730 9.903682 CATATGAATAAATAAGGCAGAAAGTGG 57.096 33.333 0.00 0.00 0.00 4.00
3284 3736 3.758172 GGCAGAAAGTGGCGGAAA 58.242 55.556 0.00 0.00 42.77 3.13
3285 3737 2.267045 GGCAGAAAGTGGCGGAAAT 58.733 52.632 0.00 0.00 42.77 2.17
3286 3738 0.603065 GGCAGAAAGTGGCGGAAATT 59.397 50.000 0.00 0.00 42.77 1.82
3287 3739 1.402852 GGCAGAAAGTGGCGGAAATTC 60.403 52.381 0.00 0.00 42.77 2.17
3288 3740 1.402852 GCAGAAAGTGGCGGAAATTCC 60.403 52.381 0.99 0.99 0.00 3.01
3289 3741 2.162681 CAGAAAGTGGCGGAAATTCCT 58.837 47.619 10.64 0.00 33.30 3.36
3290 3742 2.558359 CAGAAAGTGGCGGAAATTCCTT 59.442 45.455 10.64 0.00 33.30 3.36
3291 3743 3.005791 CAGAAAGTGGCGGAAATTCCTTT 59.994 43.478 10.64 3.28 33.30 3.11
3292 3744 3.641436 AGAAAGTGGCGGAAATTCCTTTT 59.359 39.130 10.64 3.32 33.30 2.27
3293 3745 3.385193 AAGTGGCGGAAATTCCTTTTG 57.615 42.857 10.64 0.00 33.30 2.44
3294 3746 1.618343 AGTGGCGGAAATTCCTTTTGG 59.382 47.619 10.64 0.00 42.21 3.28
3303 3755 2.351276 TCCTTTTGGAGCTCGGCC 59.649 61.111 7.83 0.00 45.19 6.13
3304 3756 2.224159 TCCTTTTGGAGCTCGGCCT 61.224 57.895 7.83 0.00 45.19 5.19
3305 3757 1.746991 CCTTTTGGAGCTCGGCCTC 60.747 63.158 7.83 0.00 44.07 4.70
3311 3763 3.071206 GAGCTCGGCCTCCAGTGA 61.071 66.667 0.00 0.00 0.00 3.41
3312 3764 3.073735 AGCTCGGCCTCCAGTGAG 61.074 66.667 0.00 0.00 38.42 3.51
3320 3772 3.811702 CTCCAGTGAGGCCTCCAA 58.188 61.111 29.95 9.78 37.29 3.53
3321 3773 2.069776 CTCCAGTGAGGCCTCCAAA 58.930 57.895 29.95 8.94 37.29 3.28
3322 3774 0.622665 CTCCAGTGAGGCCTCCAAAT 59.377 55.000 29.95 8.92 37.29 2.32
3323 3775 1.005215 CTCCAGTGAGGCCTCCAAATT 59.995 52.381 29.95 5.47 37.29 1.82
3324 3776 1.004745 TCCAGTGAGGCCTCCAAATTC 59.995 52.381 29.95 12.61 37.29 2.17
3325 3777 1.272092 CCAGTGAGGCCTCCAAATTCA 60.272 52.381 29.95 7.46 0.00 2.57
3326 3778 2.517959 CAGTGAGGCCTCCAAATTCAA 58.482 47.619 29.95 5.60 0.00 2.69
3327 3779 2.892852 CAGTGAGGCCTCCAAATTCAAA 59.107 45.455 29.95 4.78 0.00 2.69
3328 3780 3.512724 CAGTGAGGCCTCCAAATTCAAAT 59.487 43.478 29.95 4.85 0.00 2.32
3329 3781 4.020839 CAGTGAGGCCTCCAAATTCAAATT 60.021 41.667 29.95 1.51 0.00 1.82
3330 3782 4.594491 AGTGAGGCCTCCAAATTCAAATTT 59.406 37.500 29.95 0.00 39.07 1.82
3359 3811 7.859613 TTTCGTCGAAATTCATATTTTTGCA 57.140 28.000 16.22 0.00 34.16 4.08
3360 3812 8.459521 TTTCGTCGAAATTCATATTTTTGCAT 57.540 26.923 16.22 0.00 34.16 3.96
3361 3813 8.459521 TTCGTCGAAATTCATATTTTTGCATT 57.540 26.923 4.91 0.00 34.16 3.56
3362 3814 8.459521 TCGTCGAAATTCATATTTTTGCATTT 57.540 26.923 0.00 0.00 34.16 2.32
3363 3815 8.582930 TCGTCGAAATTCATATTTTTGCATTTC 58.417 29.630 0.00 0.00 36.51 2.17
3364 3816 8.371787 CGTCGAAATTCATATTTTTGCATTTCA 58.628 29.630 9.18 0.00 38.40 2.69
3401 3853 9.851686 AGAAAAATACTGATATACATGAAGGCA 57.148 29.630 0.00 0.00 0.00 4.75
3407 3859 7.969536 ACTGATATACATGAAGGCATAACAC 57.030 36.000 0.00 0.00 32.27 3.32
3408 3860 7.508687 ACTGATATACATGAAGGCATAACACA 58.491 34.615 0.00 0.00 32.27 3.72
3409 3861 7.442364 ACTGATATACATGAAGGCATAACACAC 59.558 37.037 0.00 0.00 32.27 3.82
3410 3862 7.278875 TGATATACATGAAGGCATAACACACA 58.721 34.615 0.00 0.00 32.27 3.72
3411 3863 7.938490 TGATATACATGAAGGCATAACACACAT 59.062 33.333 0.00 0.00 32.27 3.21
3412 3864 4.707030 ACATGAAGGCATAACACACATG 57.293 40.909 0.00 0.00 39.27 3.21
3413 3865 4.081406 ACATGAAGGCATAACACACATGT 58.919 39.130 0.00 0.00 40.84 3.21
3414 3866 4.082625 ACATGAAGGCATAACACACATGTG 60.083 41.667 24.25 24.25 42.90 3.21
3415 3867 4.082625 CATGAAGGCATAACACACATGTGT 60.083 41.667 25.76 25.76 46.35 3.72
3416 3868 6.126914 CATGAAGGCATAACACACATGTGTG 61.127 44.000 43.01 43.01 44.88 3.82
3431 3883 7.984002 CACATGTGTGTAAATTTTCAGTTCA 57.016 32.000 18.03 0.00 40.96 3.18
3432 3884 8.404889 CACATGTGTGTAAATTTTCAGTTCAA 57.595 30.769 18.03 0.00 40.96 2.69
3433 3885 8.867935 CACATGTGTGTAAATTTTCAGTTCAAA 58.132 29.630 18.03 0.00 40.96 2.69
3434 3886 9.429359 ACATGTGTGTAAATTTTCAGTTCAAAA 57.571 25.926 0.00 0.00 36.63 2.44
3454 3906 8.365060 TCAAAATACATTGAAATGAGGGATGT 57.635 30.769 9.94 0.00 39.67 3.06
3455 3907 8.252417 TCAAAATACATTGAAATGAGGGATGTG 58.748 33.333 9.94 0.50 39.67 3.21
3456 3908 5.779529 ATACATTGAAATGAGGGATGTGC 57.220 39.130 9.94 0.00 39.67 4.57
3457 3909 3.433343 ACATTGAAATGAGGGATGTGCA 58.567 40.909 9.94 0.00 39.67 4.57
3458 3910 3.833650 ACATTGAAATGAGGGATGTGCAA 59.166 39.130 9.94 0.00 39.67 4.08
3459 3911 4.283978 ACATTGAAATGAGGGATGTGCAAA 59.716 37.500 9.94 0.00 39.67 3.68
3460 3912 4.952071 TTGAAATGAGGGATGTGCAAAA 57.048 36.364 0.00 0.00 0.00 2.44
3461 3913 4.952071 TGAAATGAGGGATGTGCAAAAA 57.048 36.364 0.00 0.00 0.00 1.94
3484 3936 8.648557 AAAAGACAAATCTGAGGCTTTTTAAC 57.351 30.769 3.80 0.00 34.48 2.01
3485 3937 6.959639 AGACAAATCTGAGGCTTTTTAACA 57.040 33.333 0.00 0.00 32.29 2.41
3486 3938 6.739112 AGACAAATCTGAGGCTTTTTAACAC 58.261 36.000 0.00 0.00 32.29 3.32
3487 3939 5.519722 ACAAATCTGAGGCTTTTTAACACG 58.480 37.500 0.00 0.00 0.00 4.49
3488 3940 5.067283 ACAAATCTGAGGCTTTTTAACACGT 59.933 36.000 0.00 0.00 0.00 4.49
3489 3941 4.749245 ATCTGAGGCTTTTTAACACGTG 57.251 40.909 15.48 15.48 0.00 4.49
3490 3942 3.799366 TCTGAGGCTTTTTAACACGTGA 58.201 40.909 25.01 0.00 0.00 4.35
3491 3943 4.385825 TCTGAGGCTTTTTAACACGTGAT 58.614 39.130 25.01 14.02 0.00 3.06
3492 3944 5.543714 TCTGAGGCTTTTTAACACGTGATA 58.456 37.500 25.01 12.74 0.00 2.15
3493 3945 5.407387 TCTGAGGCTTTTTAACACGTGATAC 59.593 40.000 25.01 2.08 0.00 2.24
3494 3946 5.302360 TGAGGCTTTTTAACACGTGATACT 58.698 37.500 25.01 6.83 0.00 2.12
3495 3947 6.457355 TGAGGCTTTTTAACACGTGATACTA 58.543 36.000 25.01 2.54 0.00 1.82
3496 3948 7.101054 TGAGGCTTTTTAACACGTGATACTAT 58.899 34.615 25.01 0.00 0.00 2.12
3497 3949 7.604927 TGAGGCTTTTTAACACGTGATACTATT 59.395 33.333 25.01 7.35 0.00 1.73
3498 3950 7.971455 AGGCTTTTTAACACGTGATACTATTC 58.029 34.615 25.01 5.33 0.00 1.75
3499 3951 7.604927 AGGCTTTTTAACACGTGATACTATTCA 59.395 33.333 25.01 0.00 0.00 2.57
3500 3952 8.395633 GGCTTTTTAACACGTGATACTATTCAT 58.604 33.333 25.01 0.00 0.00 2.57
3501 3953 9.422196 GCTTTTTAACACGTGATACTATTCATC 57.578 33.333 25.01 0.00 0.00 2.92
3502 3954 9.916397 CTTTTTAACACGTGATACTATTCATCC 57.084 33.333 25.01 0.00 0.00 3.51
3503 3955 9.661563 TTTTTAACACGTGATACTATTCATCCT 57.338 29.630 25.01 0.00 0.00 3.24
3504 3956 9.661563 TTTTAACACGTGATACTATTCATCCTT 57.338 29.630 25.01 2.91 0.00 3.36
3505 3957 8.867112 TTAACACGTGATACTATTCATCCTTC 57.133 34.615 25.01 0.00 0.00 3.46
3506 3958 5.844004 ACACGTGATACTATTCATCCTTCC 58.156 41.667 25.01 0.00 0.00 3.46
3507 3959 4.917998 CACGTGATACTATTCATCCTTCCG 59.082 45.833 10.90 0.00 0.00 4.30
3508 3960 4.022242 ACGTGATACTATTCATCCTTCCGG 60.022 45.833 0.00 0.00 0.00 5.14
3509 3961 4.246458 GTGATACTATTCATCCTTCCGGC 58.754 47.826 0.00 0.00 0.00 6.13
3510 3962 3.260884 TGATACTATTCATCCTTCCGGCC 59.739 47.826 0.00 0.00 0.00 6.13
3511 3963 0.765510 ACTATTCATCCTTCCGGCCC 59.234 55.000 0.00 0.00 0.00 5.80
3512 3964 0.764890 CTATTCATCCTTCCGGCCCA 59.235 55.000 0.00 0.00 0.00 5.36
3513 3965 1.352352 CTATTCATCCTTCCGGCCCAT 59.648 52.381 0.00 0.00 0.00 4.00
3514 3966 0.178981 ATTCATCCTTCCGGCCCATG 60.179 55.000 0.00 0.00 0.00 3.66
3515 3967 1.278302 TTCATCCTTCCGGCCCATGA 61.278 55.000 0.00 0.00 0.00 3.07
3516 3968 1.227102 CATCCTTCCGGCCCATGAA 59.773 57.895 0.00 0.00 0.00 2.57
3517 3969 0.178981 CATCCTTCCGGCCCATGAAT 60.179 55.000 0.00 0.00 0.00 2.57
3518 3970 0.557729 ATCCTTCCGGCCCATGAATT 59.442 50.000 0.00 0.00 0.00 2.17
3519 3971 0.334676 TCCTTCCGGCCCATGAATTT 59.665 50.000 0.00 0.00 0.00 1.82
3520 3972 0.461135 CCTTCCGGCCCATGAATTTG 59.539 55.000 0.00 0.00 0.00 2.32
3521 3973 1.185315 CTTCCGGCCCATGAATTTGT 58.815 50.000 0.00 0.00 0.00 2.83
3522 3974 1.134946 CTTCCGGCCCATGAATTTGTC 59.865 52.381 0.00 0.00 0.00 3.18
3523 3975 1.029408 TCCGGCCCATGAATTTGTCG 61.029 55.000 0.00 0.00 0.00 4.35
3524 3976 1.312371 CCGGCCCATGAATTTGTCGT 61.312 55.000 0.00 0.00 0.00 4.34
3525 3977 0.525761 CGGCCCATGAATTTGTCGTT 59.474 50.000 0.00 0.00 0.00 3.85
3526 3978 1.067915 CGGCCCATGAATTTGTCGTTT 60.068 47.619 0.00 0.00 0.00 3.60
3527 3979 2.609244 CGGCCCATGAATTTGTCGTTTT 60.609 45.455 0.00 0.00 0.00 2.43
3528 3980 3.398406 GGCCCATGAATTTGTCGTTTTT 58.602 40.909 0.00 0.00 0.00 1.94
3529 3981 3.186205 GGCCCATGAATTTGTCGTTTTTG 59.814 43.478 0.00 0.00 0.00 2.44
3530 3982 3.807071 GCCCATGAATTTGTCGTTTTTGT 59.193 39.130 0.00 0.00 0.00 2.83
3531 3983 4.985409 GCCCATGAATTTGTCGTTTTTGTA 59.015 37.500 0.00 0.00 0.00 2.41
3532 3984 5.107645 GCCCATGAATTTGTCGTTTTTGTAC 60.108 40.000 0.00 0.00 0.00 2.90
3533 3985 5.980116 CCCATGAATTTGTCGTTTTTGTACA 59.020 36.000 0.00 0.00 0.00 2.90
3534 3986 6.143758 CCCATGAATTTGTCGTTTTTGTACAG 59.856 38.462 0.00 0.00 0.00 2.74
3535 3987 6.143758 CCATGAATTTGTCGTTTTTGTACAGG 59.856 38.462 0.00 0.00 0.00 4.00
3536 3988 6.197364 TGAATTTGTCGTTTTTGTACAGGT 57.803 33.333 0.00 0.00 0.00 4.00
3537 3989 6.259638 TGAATTTGTCGTTTTTGTACAGGTC 58.740 36.000 0.00 0.00 0.00 3.85
3538 3990 3.929417 TTGTCGTTTTTGTACAGGTCG 57.071 42.857 0.00 0.87 0.00 4.79
3539 3991 1.593933 TGTCGTTTTTGTACAGGTCGC 59.406 47.619 0.00 0.00 0.00 5.19
3540 3992 1.593933 GTCGTTTTTGTACAGGTCGCA 59.406 47.619 0.00 0.00 0.00 5.10
3541 3993 2.030701 GTCGTTTTTGTACAGGTCGCAA 59.969 45.455 0.00 0.00 0.00 4.85
3542 3994 2.030701 TCGTTTTTGTACAGGTCGCAAC 59.969 45.455 0.00 0.00 0.00 4.17
3543 3995 2.031191 CGTTTTTGTACAGGTCGCAACT 59.969 45.455 0.00 0.00 0.00 3.16
3544 3996 3.614588 GTTTTTGTACAGGTCGCAACTC 58.385 45.455 0.00 0.00 0.00 3.01
3545 3997 2.605837 TTTGTACAGGTCGCAACTCA 57.394 45.000 0.00 0.00 0.00 3.41
3546 3998 2.605837 TTGTACAGGTCGCAACTCAA 57.394 45.000 0.00 0.00 0.00 3.02
3547 3999 2.148916 TGTACAGGTCGCAACTCAAG 57.851 50.000 0.00 0.00 0.00 3.02
3548 4000 1.270094 TGTACAGGTCGCAACTCAAGG 60.270 52.381 0.00 0.00 0.00 3.61
3549 4001 1.045407 TACAGGTCGCAACTCAAGGT 58.955 50.000 0.00 0.00 0.00 3.50
3550 4002 1.045407 ACAGGTCGCAACTCAAGGTA 58.955 50.000 0.00 0.00 0.00 3.08
3551 4003 1.623811 ACAGGTCGCAACTCAAGGTAT 59.376 47.619 0.00 0.00 0.00 2.73
3552 4004 2.038557 ACAGGTCGCAACTCAAGGTATT 59.961 45.455 0.00 0.00 0.00 1.89
3553 4005 3.074412 CAGGTCGCAACTCAAGGTATTT 58.926 45.455 0.00 0.00 0.00 1.40
3554 4006 3.125316 CAGGTCGCAACTCAAGGTATTTC 59.875 47.826 0.00 0.00 0.00 2.17
3555 4007 3.071479 GGTCGCAACTCAAGGTATTTCA 58.929 45.455 0.00 0.00 0.00 2.69
3556 4008 3.689649 GGTCGCAACTCAAGGTATTTCAT 59.310 43.478 0.00 0.00 0.00 2.57
3557 4009 4.201822 GGTCGCAACTCAAGGTATTTCATC 60.202 45.833 0.00 0.00 0.00 2.92
3558 4010 4.391830 GTCGCAACTCAAGGTATTTCATCA 59.608 41.667 0.00 0.00 0.00 3.07
3559 4011 5.065218 GTCGCAACTCAAGGTATTTCATCAT 59.935 40.000 0.00 0.00 0.00 2.45
3560 4012 5.065090 TCGCAACTCAAGGTATTTCATCATG 59.935 40.000 0.00 0.00 0.00 3.07
3561 4013 5.065090 CGCAACTCAAGGTATTTCATCATGA 59.935 40.000 0.00 0.00 0.00 3.07
3562 4014 6.403527 CGCAACTCAAGGTATTTCATCATGAA 60.404 38.462 0.00 0.00 34.03 2.57
3563 4015 7.486647 GCAACTCAAGGTATTTCATCATGAAT 58.513 34.615 0.00 0.00 36.11 2.57
3564 4016 7.977853 GCAACTCAAGGTATTTCATCATGAATT 59.022 33.333 0.00 0.16 36.11 2.17
3565 4017 9.865321 CAACTCAAGGTATTTCATCATGAATTT 57.135 29.630 0.00 0.00 36.11 1.82
3599 4051 7.354025 TGTGGTTTACATCTTTACATACACG 57.646 36.000 0.00 0.00 33.42 4.49
3600 4052 6.128499 TGTGGTTTACATCTTTACATACACGC 60.128 38.462 0.00 0.00 33.42 5.34
3601 4053 5.932883 TGGTTTACATCTTTACATACACGCA 59.067 36.000 0.00 0.00 0.00 5.24
3602 4054 6.596106 TGGTTTACATCTTTACATACACGCAT 59.404 34.615 0.00 0.00 0.00 4.73
3603 4055 7.764901 TGGTTTACATCTTTACATACACGCATA 59.235 33.333 0.00 0.00 0.00 3.14
3604 4056 8.770828 GGTTTACATCTTTACATACACGCATAT 58.229 33.333 0.00 0.00 0.00 1.78
3666 4118 8.389779 TGAATTTTTCAAAAATAAAGGCCTCC 57.610 30.769 5.23 0.00 36.59 4.30
3667 4119 7.995488 TGAATTTTTCAAAAATAAAGGCCTCCA 59.005 29.630 5.23 0.00 36.59 3.86
3668 4120 8.938801 AATTTTTCAAAAATAAAGGCCTCCAT 57.061 26.923 5.23 0.00 0.00 3.41
3669 4121 7.742556 TTTTTCAAAAATAAAGGCCTCCATG 57.257 32.000 5.23 0.00 0.00 3.66
3670 4122 6.678568 TTTCAAAAATAAAGGCCTCCATGA 57.321 33.333 5.23 1.25 0.00 3.07
3671 4123 6.678568 TTCAAAAATAAAGGCCTCCATGAA 57.321 33.333 5.23 7.78 0.00 2.57
3672 4124 6.284891 TCAAAAATAAAGGCCTCCATGAAG 57.715 37.500 5.23 0.00 0.00 3.02
3673 4125 4.743057 AAAATAAAGGCCTCCATGAAGC 57.257 40.909 5.23 0.00 0.00 3.86
3674 4126 3.677156 AATAAAGGCCTCCATGAAGCT 57.323 42.857 5.23 0.00 0.00 3.74
3675 4127 2.717639 TAAAGGCCTCCATGAAGCTC 57.282 50.000 5.23 0.00 0.00 4.09
3676 4128 0.393537 AAAGGCCTCCATGAAGCTCG 60.394 55.000 5.23 0.00 0.00 5.03
3677 4129 2.203126 GGCCTCCATGAAGCTCGG 60.203 66.667 0.00 0.00 0.00 4.63
3678 4130 2.899339 GCCTCCATGAAGCTCGGC 60.899 66.667 0.00 0.00 0.00 5.54
3679 4131 2.203126 CCTCCATGAAGCTCGGCC 60.203 66.667 0.00 0.00 0.00 6.13
3680 4132 2.739996 CCTCCATGAAGCTCGGCCT 61.740 63.158 0.00 0.00 0.00 5.19
3681 4133 1.227497 CTCCATGAAGCTCGGCCTC 60.227 63.158 0.00 0.00 0.00 4.70
3682 4134 2.203126 CCATGAAGCTCGGCCTCC 60.203 66.667 0.00 0.00 0.00 4.30
3683 4135 2.586245 CATGAAGCTCGGCCTCCA 59.414 61.111 0.00 0.00 0.00 3.86
3684 4136 1.078214 CATGAAGCTCGGCCTCCAA 60.078 57.895 0.00 0.00 0.00 3.53
3685 4137 0.677731 CATGAAGCTCGGCCTCCAAA 60.678 55.000 0.00 0.00 0.00 3.28
3686 4138 0.038166 ATGAAGCTCGGCCTCCAAAA 59.962 50.000 0.00 0.00 0.00 2.44
3687 4139 0.606401 TGAAGCTCGGCCTCCAAAAG 60.606 55.000 0.00 0.00 0.00 2.27
3705 4157 1.274712 AGGCCTCTCTCAGAAAGTGG 58.725 55.000 0.00 0.00 0.00 4.00
3726 4178 7.996385 AGTGGTAATTACATTATCTTTGCACC 58.004 34.615 17.16 0.00 0.00 5.01
3848 4305 2.945668 ACTCTTTGTTCAGTTCAGCACC 59.054 45.455 0.00 0.00 0.00 5.01
3860 4317 4.741676 CAGTTCAGCACCAAACAGAATTTC 59.258 41.667 0.00 0.00 0.00 2.17
3861 4318 4.051237 GTTCAGCACCAAACAGAATTTCC 58.949 43.478 0.00 0.00 0.00 3.13
3862 4319 2.627699 TCAGCACCAAACAGAATTTCCC 59.372 45.455 0.00 0.00 0.00 3.97
3863 4320 2.629617 CAGCACCAAACAGAATTTCCCT 59.370 45.455 0.00 0.00 0.00 4.20
3864 4321 3.070015 CAGCACCAAACAGAATTTCCCTT 59.930 43.478 0.00 0.00 0.00 3.95
3865 4322 3.070015 AGCACCAAACAGAATTTCCCTTG 59.930 43.478 0.00 0.00 0.00 3.61
3866 4323 3.181466 GCACCAAACAGAATTTCCCTTGT 60.181 43.478 0.00 0.00 0.00 3.16
3867 4324 4.620982 CACCAAACAGAATTTCCCTTGTC 58.379 43.478 0.00 0.00 0.00 3.18
3868 4325 3.317993 ACCAAACAGAATTTCCCTTGTCG 59.682 43.478 0.00 0.00 0.00 4.35
3869 4326 3.317993 CCAAACAGAATTTCCCTTGTCGT 59.682 43.478 0.00 0.00 0.00 4.34
3870 4327 4.537015 CAAACAGAATTTCCCTTGTCGTC 58.463 43.478 0.00 0.00 0.00 4.20
3871 4328 2.779506 ACAGAATTTCCCTTGTCGTCC 58.220 47.619 0.00 0.00 0.00 4.79
3872 4329 2.372172 ACAGAATTTCCCTTGTCGTCCT 59.628 45.455 0.00 0.00 0.00 3.85
3873 4330 3.181443 ACAGAATTTCCCTTGTCGTCCTT 60.181 43.478 0.00 0.00 0.00 3.36
3874 4331 3.437049 CAGAATTTCCCTTGTCGTCCTTC 59.563 47.826 0.00 0.00 0.00 3.46
3875 4332 2.094762 ATTTCCCTTGTCGTCCTTCG 57.905 50.000 0.00 0.00 41.41 3.79
3876 4333 0.601841 TTTCCCTTGTCGTCCTTCGC 60.602 55.000 0.00 0.00 39.67 4.70
3877 4334 1.469335 TTCCCTTGTCGTCCTTCGCT 61.469 55.000 0.00 0.00 39.67 4.93
3878 4335 0.609957 TCCCTTGTCGTCCTTCGCTA 60.610 55.000 0.00 0.00 39.67 4.26
3879 4336 0.460311 CCCTTGTCGTCCTTCGCTAT 59.540 55.000 0.00 0.00 39.67 2.97
3880 4337 1.560923 CCTTGTCGTCCTTCGCTATG 58.439 55.000 0.00 0.00 39.67 2.23
3881 4338 0.924090 CTTGTCGTCCTTCGCTATGC 59.076 55.000 0.00 0.00 39.67 3.14
3882 4339 0.459585 TTGTCGTCCTTCGCTATGCC 60.460 55.000 0.00 0.00 39.67 4.40
3883 4340 1.944676 GTCGTCCTTCGCTATGCCG 60.945 63.158 0.00 0.00 39.67 5.69
3884 4341 2.104331 CGTCCTTCGCTATGCCGT 59.896 61.111 0.00 0.00 0.00 5.68
3885 4342 1.518572 CGTCCTTCGCTATGCCGTT 60.519 57.895 0.00 0.00 0.00 4.44
3886 4343 1.082117 CGTCCTTCGCTATGCCGTTT 61.082 55.000 0.00 0.00 0.00 3.60
3887 4344 1.084289 GTCCTTCGCTATGCCGTTTT 58.916 50.000 0.00 0.00 0.00 2.43
3888 4345 1.062148 GTCCTTCGCTATGCCGTTTTC 59.938 52.381 0.00 0.00 0.00 2.29
3889 4346 1.083489 CCTTCGCTATGCCGTTTTCA 58.917 50.000 0.00 0.00 0.00 2.69
3890 4347 1.466950 CCTTCGCTATGCCGTTTTCAA 59.533 47.619 0.00 0.00 0.00 2.69
3891 4348 2.476185 CCTTCGCTATGCCGTTTTCAAG 60.476 50.000 0.00 0.00 0.00 3.02
3892 4349 0.446222 TCGCTATGCCGTTTTCAAGC 59.554 50.000 0.00 0.00 0.00 4.01
3893 4350 0.857311 CGCTATGCCGTTTTCAAGCG 60.857 55.000 0.00 0.00 45.48 4.68
3899 4356 4.025401 CGTTTTCAAGCGGCGCCT 62.025 61.111 30.40 14.31 0.00 5.52
3900 4357 2.126850 GTTTTCAAGCGGCGCCTC 60.127 61.111 30.40 18.43 0.00 4.70
3901 4358 3.722295 TTTTCAAGCGGCGCCTCG 61.722 61.111 30.40 17.42 0.00 4.63
3902 4359 4.980805 TTTCAAGCGGCGCCTCGT 62.981 61.111 30.40 12.96 0.00 4.18
3910 4367 4.821589 GGCGCCTCGTCTCCCTTG 62.822 72.222 22.15 0.00 0.00 3.61
3911 4368 4.070552 GCGCCTCGTCTCCCTTGT 62.071 66.667 0.00 0.00 0.00 3.16
3912 4369 2.182030 CGCCTCGTCTCCCTTGTC 59.818 66.667 0.00 0.00 0.00 3.18
3913 4370 2.182030 GCCTCGTCTCCCTTGTCG 59.818 66.667 0.00 0.00 0.00 4.35
3914 4371 2.637383 GCCTCGTCTCCCTTGTCGT 61.637 63.158 0.00 0.00 0.00 4.34
3915 4372 1.213013 CCTCGTCTCCCTTGTCGTG 59.787 63.158 0.00 0.00 0.00 4.35
3916 4373 1.444553 CTCGTCTCCCTTGTCGTGC 60.445 63.158 0.00 0.00 0.00 5.34
3917 4374 1.867919 CTCGTCTCCCTTGTCGTGCT 61.868 60.000 0.00 0.00 0.00 4.40
3918 4375 1.734477 CGTCTCCCTTGTCGTGCTG 60.734 63.158 0.00 0.00 0.00 4.41
3919 4376 2.029844 GTCTCCCTTGTCGTGCTGC 61.030 63.158 0.00 0.00 0.00 5.25
3920 4377 2.743928 CTCCCTTGTCGTGCTGCC 60.744 66.667 0.00 0.00 0.00 4.85
3921 4378 4.680237 TCCCTTGTCGTGCTGCCG 62.680 66.667 0.00 0.19 0.00 5.69
3922 4379 4.988598 CCCTTGTCGTGCTGCCGT 62.989 66.667 9.66 0.00 0.00 5.68
3923 4380 2.972505 CCTTGTCGTGCTGCCGTT 60.973 61.111 9.66 0.00 0.00 4.44
3924 4381 2.542907 CCTTGTCGTGCTGCCGTTT 61.543 57.895 9.66 0.00 0.00 3.60
3925 4382 1.369209 CTTGTCGTGCTGCCGTTTG 60.369 57.895 9.66 0.00 0.00 2.93
3926 4383 1.771073 CTTGTCGTGCTGCCGTTTGA 61.771 55.000 9.66 0.00 0.00 2.69
3927 4384 2.042520 TTGTCGTGCTGCCGTTTGAC 62.043 55.000 9.66 5.48 0.00 3.18
3928 4385 2.970324 TCGTGCTGCCGTTTGACC 60.970 61.111 9.66 0.00 0.00 4.02
3929 4386 2.972505 CGTGCTGCCGTTTGACCT 60.973 61.111 0.00 0.00 0.00 3.85
3930 4387 2.639286 GTGCTGCCGTTTGACCTG 59.361 61.111 0.00 0.00 0.00 4.00
3931 4388 2.594303 TGCTGCCGTTTGACCTGG 60.594 61.111 0.00 0.00 0.00 4.45
3932 4389 2.594592 GCTGCCGTTTGACCTGGT 60.595 61.111 0.00 0.00 0.00 4.00
3933 4390 2.617274 GCTGCCGTTTGACCTGGTC 61.617 63.158 19.96 19.96 0.00 4.02
3934 4391 1.071471 CTGCCGTTTGACCTGGTCT 59.929 57.895 26.03 0.00 33.15 3.85
3935 4392 0.535102 CTGCCGTTTGACCTGGTCTT 60.535 55.000 26.03 0.00 33.15 3.01
3936 4393 0.817634 TGCCGTTTGACCTGGTCTTG 60.818 55.000 26.03 13.25 33.15 3.02
3937 4394 1.515521 GCCGTTTGACCTGGTCTTGG 61.516 60.000 26.03 20.94 33.15 3.61
3938 4395 1.515521 CCGTTTGACCTGGTCTTGGC 61.516 60.000 26.03 13.11 33.15 4.52
3939 4396 1.515521 CGTTTGACCTGGTCTTGGCC 61.516 60.000 26.03 0.00 33.15 5.36
3940 4397 0.467290 GTTTGACCTGGTCTTGGCCA 60.467 55.000 26.03 0.00 36.97 5.36
3941 4398 0.467290 TTTGACCTGGTCTTGGCCAC 60.467 55.000 26.03 0.00 34.36 5.01
3942 4399 2.034221 GACCTGGTCTTGGCCACC 59.966 66.667 19.53 3.87 34.36 4.61
3943 4400 3.569200 GACCTGGTCTTGGCCACCC 62.569 68.421 19.53 6.64 34.36 4.61
3944 4401 4.366684 CCTGGTCTTGGCCACCCC 62.367 72.222 3.88 6.21 34.36 4.95
3945 4402 3.260100 CTGGTCTTGGCCACCCCT 61.260 66.667 3.88 0.00 34.36 4.79
3946 4403 3.574074 CTGGTCTTGGCCACCCCTG 62.574 68.421 3.88 5.95 34.36 4.45
3947 4404 3.580319 GGTCTTGGCCACCCCTGT 61.580 66.667 3.88 0.00 0.00 4.00
3948 4405 2.282462 GTCTTGGCCACCCCTGTG 60.282 66.667 3.88 0.00 42.39 3.66
3949 4406 4.284550 TCTTGGCCACCCCTGTGC 62.285 66.667 3.88 0.00 41.35 4.57
3971 4428 4.057224 TGCGACGGCATTTCTGTT 57.943 50.000 0.00 0.00 46.21 3.16
3972 4429 1.866237 TGCGACGGCATTTCTGTTC 59.134 52.632 0.00 0.00 46.21 3.18
3973 4430 0.602638 TGCGACGGCATTTCTGTTCT 60.603 50.000 0.00 0.00 46.21 3.01
3974 4431 0.095417 GCGACGGCATTTCTGTTCTC 59.905 55.000 0.00 0.00 39.62 2.87
3975 4432 0.721718 CGACGGCATTTCTGTTCTCC 59.278 55.000 0.00 0.00 33.57 3.71
3976 4433 1.087501 GACGGCATTTCTGTTCTCCC 58.912 55.000 0.00 0.00 33.57 4.30
3977 4434 0.673644 ACGGCATTTCTGTTCTCCCG 60.674 55.000 0.00 0.00 40.01 5.14
3978 4435 1.803289 GGCATTTCTGTTCTCCCGC 59.197 57.895 0.00 0.00 0.00 6.13
3979 4436 1.657751 GGCATTTCTGTTCTCCCGCC 61.658 60.000 0.00 0.00 0.00 6.13
3980 4437 1.982073 GCATTTCTGTTCTCCCGCCG 61.982 60.000 0.00 0.00 0.00 6.46
3981 4438 1.745489 ATTTCTGTTCTCCCGCCGC 60.745 57.895 0.00 0.00 0.00 6.53
3982 4439 2.185310 ATTTCTGTTCTCCCGCCGCT 62.185 55.000 0.00 0.00 0.00 5.52
3983 4440 2.781595 TTTCTGTTCTCCCGCCGCTC 62.782 60.000 0.00 0.00 0.00 5.03
3984 4441 3.764466 CTGTTCTCCCGCCGCTCT 61.764 66.667 0.00 0.00 0.00 4.09
3985 4442 3.302347 CTGTTCTCCCGCCGCTCTT 62.302 63.158 0.00 0.00 0.00 2.85
3986 4443 2.047179 GTTCTCCCGCCGCTCTTT 60.047 61.111 0.00 0.00 0.00 2.52
3987 4444 2.047274 TTCTCCCGCCGCTCTTTG 60.047 61.111 0.00 0.00 0.00 2.77
3988 4445 3.605749 TTCTCCCGCCGCTCTTTGG 62.606 63.158 0.00 0.00 0.00 3.28
3995 4452 4.394712 CCGCTCTTTGGCCTCCGT 62.395 66.667 3.32 0.00 0.00 4.69
3996 4453 2.815647 CGCTCTTTGGCCTCCGTC 60.816 66.667 3.32 0.00 0.00 4.79
3997 4454 2.436824 GCTCTTTGGCCTCCGTCC 60.437 66.667 3.32 0.00 0.00 4.79
3998 4455 2.960688 GCTCTTTGGCCTCCGTCCT 61.961 63.158 3.32 0.00 0.00 3.85
3999 4456 1.679898 CTCTTTGGCCTCCGTCCTT 59.320 57.895 3.32 0.00 0.00 3.36
4000 4457 0.036875 CTCTTTGGCCTCCGTCCTTT 59.963 55.000 3.32 0.00 0.00 3.11
4001 4458 0.250727 TCTTTGGCCTCCGTCCTTTG 60.251 55.000 3.32 0.00 0.00 2.77
4002 4459 0.537371 CTTTGGCCTCCGTCCTTTGT 60.537 55.000 3.32 0.00 0.00 2.83
4003 4460 0.821711 TTTGGCCTCCGTCCTTTGTG 60.822 55.000 3.32 0.00 0.00 3.33
4004 4461 1.990160 TTGGCCTCCGTCCTTTGTGT 61.990 55.000 3.32 0.00 0.00 3.72
4005 4462 1.671379 GGCCTCCGTCCTTTGTGTC 60.671 63.158 0.00 0.00 0.00 3.67
4006 4463 1.371558 GCCTCCGTCCTTTGTGTCT 59.628 57.895 0.00 0.00 0.00 3.41
4007 4464 0.670854 GCCTCCGTCCTTTGTGTCTC 60.671 60.000 0.00 0.00 0.00 3.36
4008 4465 0.679505 CCTCCGTCCTTTGTGTCTCA 59.320 55.000 0.00 0.00 0.00 3.27
4009 4466 1.276421 CCTCCGTCCTTTGTGTCTCAT 59.724 52.381 0.00 0.00 0.00 2.90
4010 4467 2.611518 CTCCGTCCTTTGTGTCTCATC 58.388 52.381 0.00 0.00 0.00 2.92
4011 4468 1.967779 TCCGTCCTTTGTGTCTCATCA 59.032 47.619 0.00 0.00 0.00 3.07
4012 4469 2.029020 TCCGTCCTTTGTGTCTCATCAG 60.029 50.000 0.00 0.00 0.00 2.90
4013 4470 2.029020 CCGTCCTTTGTGTCTCATCAGA 60.029 50.000 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.381323 GGAAGCTTGCAAATATATTTAGGCAT 58.619 34.615 18.61 7.84 31.55 4.40
1 2 6.514870 CGGAAGCTTGCAAATATATTTAGGCA 60.515 38.462 18.65 15.56 30.08 4.75
21 22 3.632145 AGTATTTAGGCATTTGGCGGAAG 59.368 43.478 0.00 0.00 46.16 3.46
22 23 3.626930 AGTATTTAGGCATTTGGCGGAA 58.373 40.909 0.00 0.00 46.16 4.30
23 24 3.290948 AGTATTTAGGCATTTGGCGGA 57.709 42.857 0.00 0.00 46.16 5.54
24 25 5.240623 TGATTAGTATTTAGGCATTTGGCGG 59.759 40.000 0.00 0.00 46.16 6.13
25 26 6.142817 GTGATTAGTATTTAGGCATTTGGCG 58.857 40.000 0.00 0.00 46.16 5.69
26 27 7.038154 TGTGATTAGTATTTAGGCATTTGGC 57.962 36.000 0.00 0.00 43.74 4.52
27 28 9.683069 GATTGTGATTAGTATTTAGGCATTTGG 57.317 33.333 0.00 0.00 0.00 3.28
30 31 9.071276 CCAGATTGTGATTAGTATTTAGGCATT 57.929 33.333 0.00 0.00 0.00 3.56
31 32 7.175641 GCCAGATTGTGATTAGTATTTAGGCAT 59.824 37.037 0.00 0.00 35.15 4.40
32 33 6.486657 GCCAGATTGTGATTAGTATTTAGGCA 59.513 38.462 0.00 0.00 35.15 4.75
33 34 6.712547 AGCCAGATTGTGATTAGTATTTAGGC 59.287 38.462 0.00 0.00 35.26 3.93
34 35 8.682936 AAGCCAGATTGTGATTAGTATTTAGG 57.317 34.615 0.00 0.00 0.00 2.69
39 40 9.461312 TGTTAAAAGCCAGATTGTGATTAGTAT 57.539 29.630 0.00 0.00 0.00 2.12
40 41 8.856153 TGTTAAAAGCCAGATTGTGATTAGTA 57.144 30.769 0.00 0.00 0.00 1.82
41 42 7.759489 TGTTAAAAGCCAGATTGTGATTAGT 57.241 32.000 0.00 0.00 0.00 2.24
42 43 7.221452 GCATGTTAAAAGCCAGATTGTGATTAG 59.779 37.037 0.00 0.00 0.00 1.73
43 44 7.035004 GCATGTTAAAAGCCAGATTGTGATTA 58.965 34.615 0.00 0.00 0.00 1.75
44 45 5.870978 GCATGTTAAAAGCCAGATTGTGATT 59.129 36.000 0.00 0.00 0.00 2.57
45 46 5.186409 AGCATGTTAAAAGCCAGATTGTGAT 59.814 36.000 0.00 0.00 0.00 3.06
46 47 4.523943 AGCATGTTAAAAGCCAGATTGTGA 59.476 37.500 0.00 0.00 0.00 3.58
47 48 4.813027 AGCATGTTAAAAGCCAGATTGTG 58.187 39.130 0.00 0.00 0.00 3.33
48 49 5.393461 GCTAGCATGTTAAAAGCCAGATTGT 60.393 40.000 10.63 0.00 0.00 2.71
49 50 5.039333 GCTAGCATGTTAAAAGCCAGATTG 58.961 41.667 10.63 0.00 0.00 2.67
50 51 5.254339 GCTAGCATGTTAAAAGCCAGATT 57.746 39.130 10.63 0.00 0.00 2.40
51 52 4.907879 GCTAGCATGTTAAAAGCCAGAT 57.092 40.909 10.63 0.00 0.00 2.90
56 57 3.487544 CGGAAGGCTAGCATGTTAAAAGC 60.488 47.826 18.24 0.00 0.00 3.51
57 58 3.487544 GCGGAAGGCTAGCATGTTAAAAG 60.488 47.826 18.24 0.00 39.11 2.27
58 59 2.422127 GCGGAAGGCTAGCATGTTAAAA 59.578 45.455 18.24 0.00 39.11 1.52
59 60 2.014128 GCGGAAGGCTAGCATGTTAAA 58.986 47.619 18.24 0.00 39.11 1.52
60 61 1.663695 GCGGAAGGCTAGCATGTTAA 58.336 50.000 18.24 0.00 39.11 2.01
61 62 3.379650 GCGGAAGGCTAGCATGTTA 57.620 52.632 18.24 0.00 39.11 2.41
62 63 4.225497 GCGGAAGGCTAGCATGTT 57.775 55.556 18.24 6.48 39.11 2.71
72 73 1.597663 CGCTAGTTAATTGGCGGAAGG 59.402 52.381 18.82 0.00 43.25 3.46
77 78 0.814010 AGGCCGCTAGTTAATTGGCG 60.814 55.000 19.48 19.48 46.66 5.69
78 79 1.333931 GAAGGCCGCTAGTTAATTGGC 59.666 52.381 0.00 0.00 44.98 4.52
79 80 1.947456 GGAAGGCCGCTAGTTAATTGG 59.053 52.381 0.00 0.00 0.00 3.16
94 95 2.845752 TTCGTTCGGATGGCGGAAGG 62.846 60.000 0.00 0.00 39.26 3.46
95 96 1.421410 CTTCGTTCGGATGGCGGAAG 61.421 60.000 0.00 0.00 34.54 3.46
96 97 1.447140 CTTCGTTCGGATGGCGGAA 60.447 57.895 0.00 0.00 0.00 4.30
97 98 2.183300 CTTCGTTCGGATGGCGGA 59.817 61.111 0.00 0.00 0.00 5.54
98 99 1.878522 CTCTTCGTTCGGATGGCGG 60.879 63.158 0.00 0.00 0.00 6.13
99 100 1.878522 CCTCTTCGTTCGGATGGCG 60.879 63.158 0.00 0.00 0.00 5.69
100 101 1.084370 CACCTCTTCGTTCGGATGGC 61.084 60.000 0.00 0.00 0.00 4.40
101 102 0.460284 CCACCTCTTCGTTCGGATGG 60.460 60.000 0.00 0.00 0.00 3.51
102 103 0.460284 CCCACCTCTTCGTTCGGATG 60.460 60.000 0.00 0.00 0.00 3.51
103 104 1.614241 CCCCACCTCTTCGTTCGGAT 61.614 60.000 0.00 0.00 0.00 4.18
104 105 2.280552 CCCCACCTCTTCGTTCGGA 61.281 63.158 0.00 0.00 0.00 4.55
105 106 1.252904 TACCCCACCTCTTCGTTCGG 61.253 60.000 0.00 0.00 0.00 4.30
106 107 0.172803 CTACCCCACCTCTTCGTTCG 59.827 60.000 0.00 0.00 0.00 3.95
107 108 1.067071 CACTACCCCACCTCTTCGTTC 60.067 57.143 0.00 0.00 0.00 3.95
108 109 0.974383 CACTACCCCACCTCTTCGTT 59.026 55.000 0.00 0.00 0.00 3.85
109 110 0.903454 CCACTACCCCACCTCTTCGT 60.903 60.000 0.00 0.00 0.00 3.85
110 111 0.613853 TCCACTACCCCACCTCTTCG 60.614 60.000 0.00 0.00 0.00 3.79
111 112 1.196012 CTCCACTACCCCACCTCTTC 58.804 60.000 0.00 0.00 0.00 2.87
112 113 0.790993 TCTCCACTACCCCACCTCTT 59.209 55.000 0.00 0.00 0.00 2.85
113 114 1.019650 ATCTCCACTACCCCACCTCT 58.980 55.000 0.00 0.00 0.00 3.69
114 115 1.880941 AATCTCCACTACCCCACCTC 58.119 55.000 0.00 0.00 0.00 3.85
115 116 2.361085 AAATCTCCACTACCCCACCT 57.639 50.000 0.00 0.00 0.00 4.00
116 117 3.089284 CAAAAATCTCCACTACCCCACC 58.911 50.000 0.00 0.00 0.00 4.61
117 118 3.089284 CCAAAAATCTCCACTACCCCAC 58.911 50.000 0.00 0.00 0.00 4.61
118 119 2.719705 ACCAAAAATCTCCACTACCCCA 59.280 45.455 0.00 0.00 0.00 4.96
119 120 3.451402 ACCAAAAATCTCCACTACCCC 57.549 47.619 0.00 0.00 0.00 4.95
120 121 4.587262 ACAAACCAAAAATCTCCACTACCC 59.413 41.667 0.00 0.00 0.00 3.69
121 122 5.300792 TGACAAACCAAAAATCTCCACTACC 59.699 40.000 0.00 0.00 0.00 3.18
122 123 6.385649 TGACAAACCAAAAATCTCCACTAC 57.614 37.500 0.00 0.00 0.00 2.73
123 124 6.775142 TCATGACAAACCAAAAATCTCCACTA 59.225 34.615 0.00 0.00 0.00 2.74
124 125 5.598005 TCATGACAAACCAAAAATCTCCACT 59.402 36.000 0.00 0.00 0.00 4.00
125 126 5.841810 TCATGACAAACCAAAAATCTCCAC 58.158 37.500 0.00 0.00 0.00 4.02
126 127 5.010922 CCTCATGACAAACCAAAAATCTCCA 59.989 40.000 0.00 0.00 0.00 3.86
127 128 5.243730 TCCTCATGACAAACCAAAAATCTCC 59.756 40.000 0.00 0.00 0.00 3.71
128 129 6.331369 TCCTCATGACAAACCAAAAATCTC 57.669 37.500 0.00 0.00 0.00 2.75
129 130 6.268387 ACATCCTCATGACAAACCAAAAATCT 59.732 34.615 0.00 0.00 33.72 2.40
130 131 6.458210 ACATCCTCATGACAAACCAAAAATC 58.542 36.000 0.00 0.00 33.72 2.17
131 132 6.423776 ACATCCTCATGACAAACCAAAAAT 57.576 33.333 0.00 0.00 33.72 1.82
132 133 5.867903 ACATCCTCATGACAAACCAAAAA 57.132 34.783 0.00 0.00 33.72 1.94
133 134 5.507149 CGAACATCCTCATGACAAACCAAAA 60.507 40.000 0.00 0.00 33.72 2.44
134 135 4.023279 CGAACATCCTCATGACAAACCAAA 60.023 41.667 0.00 0.00 33.72 3.28
135 136 3.501828 CGAACATCCTCATGACAAACCAA 59.498 43.478 0.00 0.00 33.72 3.67
136 137 3.073678 CGAACATCCTCATGACAAACCA 58.926 45.455 0.00 0.00 33.72 3.67
137 138 2.420022 CCGAACATCCTCATGACAAACC 59.580 50.000 0.00 0.00 33.72 3.27
138 139 3.125316 GTCCGAACATCCTCATGACAAAC 59.875 47.826 0.00 0.00 33.72 2.93
139 140 3.007940 AGTCCGAACATCCTCATGACAAA 59.992 43.478 0.00 0.00 33.72 2.83
140 141 2.567169 AGTCCGAACATCCTCATGACAA 59.433 45.455 0.00 0.00 33.72 3.18
141 142 2.166459 GAGTCCGAACATCCTCATGACA 59.834 50.000 0.00 0.00 33.72 3.58
142 143 2.796383 CGAGTCCGAACATCCTCATGAC 60.796 54.545 0.00 0.00 38.22 3.06
143 144 1.405463 CGAGTCCGAACATCCTCATGA 59.595 52.381 0.00 0.00 38.22 3.07
144 145 1.135139 ACGAGTCCGAACATCCTCATG 59.865 52.381 0.00 0.00 39.50 3.07
145 146 1.135139 CACGAGTCCGAACATCCTCAT 59.865 52.381 0.00 0.00 39.50 2.90
146 147 0.526211 CACGAGTCCGAACATCCTCA 59.474 55.000 0.00 0.00 39.50 3.86
147 148 0.802607 GCACGAGTCCGAACATCCTC 60.803 60.000 0.00 0.00 39.50 3.71
148 149 1.215647 GCACGAGTCCGAACATCCT 59.784 57.895 0.00 0.00 39.50 3.24
149 150 1.078759 CTGCACGAGTCCGAACATCC 61.079 60.000 0.00 0.00 39.50 3.51
150 151 0.109272 TCTGCACGAGTCCGAACATC 60.109 55.000 0.00 0.00 39.50 3.06
151 152 0.109086 CTCTGCACGAGTCCGAACAT 60.109 55.000 0.00 0.00 39.50 2.71
152 153 1.285950 CTCTGCACGAGTCCGAACA 59.714 57.895 0.00 0.00 39.50 3.18
153 154 2.089349 GCTCTGCACGAGTCCGAAC 61.089 63.158 12.71 0.00 41.98 3.95
154 155 2.201436 GAGCTCTGCACGAGTCCGAA 62.201 60.000 6.43 0.00 41.98 4.30
155 156 2.673341 AGCTCTGCACGAGTCCGA 60.673 61.111 12.71 0.00 41.98 4.55
156 157 2.202544 GAGCTCTGCACGAGTCCG 60.203 66.667 6.43 0.00 41.98 4.79
157 158 2.183046 GGAGCTCTGCACGAGTCC 59.817 66.667 14.64 13.12 41.98 3.85
158 159 2.183046 GGGAGCTCTGCACGAGTC 59.817 66.667 14.64 9.50 41.98 3.36
159 160 3.386237 GGGGAGCTCTGCACGAGT 61.386 66.667 14.64 2.95 41.98 4.18
160 161 3.385384 TGGGGAGCTCTGCACGAG 61.385 66.667 14.64 8.34 42.88 4.18
161 162 3.695606 GTGGGGAGCTCTGCACGA 61.696 66.667 14.64 0.00 0.00 4.35
162 163 2.809861 AATGTGGGGAGCTCTGCACG 62.810 60.000 14.64 0.00 0.00 5.34
163 164 0.610232 AAATGTGGGGAGCTCTGCAC 60.610 55.000 14.64 0.00 0.00 4.57
164 165 0.609957 CAAATGTGGGGAGCTCTGCA 60.610 55.000 14.64 7.98 0.00 4.41
165 166 0.610232 ACAAATGTGGGGAGCTCTGC 60.610 55.000 14.64 0.00 0.00 4.26
166 167 1.004044 AGACAAATGTGGGGAGCTCTG 59.996 52.381 14.64 3.64 0.00 3.35
167 168 1.280421 GAGACAAATGTGGGGAGCTCT 59.720 52.381 14.64 0.00 0.00 4.09
168 169 1.680249 GGAGACAAATGTGGGGAGCTC 60.680 57.143 4.71 4.71 0.00 4.09
169 170 0.329596 GGAGACAAATGTGGGGAGCT 59.670 55.000 0.00 0.00 0.00 4.09
170 171 1.026718 CGGAGACAAATGTGGGGAGC 61.027 60.000 0.00 0.00 0.00 4.70
171 172 0.392998 CCGGAGACAAATGTGGGGAG 60.393 60.000 0.00 0.00 0.00 4.30
172 173 1.131303 ACCGGAGACAAATGTGGGGA 61.131 55.000 9.46 0.00 0.00 4.81
173 174 0.251165 AACCGGAGACAAATGTGGGG 60.251 55.000 9.46 0.00 0.00 4.96
174 175 1.269448 CAAACCGGAGACAAATGTGGG 59.731 52.381 9.46 0.00 0.00 4.61
175 176 1.335872 GCAAACCGGAGACAAATGTGG 60.336 52.381 9.46 0.00 0.00 4.17
176 177 1.336440 TGCAAACCGGAGACAAATGTG 59.664 47.619 9.46 0.00 0.00 3.21
177 178 1.686355 TGCAAACCGGAGACAAATGT 58.314 45.000 9.46 0.00 0.00 2.71
178 179 2.228582 TCATGCAAACCGGAGACAAATG 59.771 45.455 9.46 4.93 0.00 2.32
179 180 2.513753 TCATGCAAACCGGAGACAAAT 58.486 42.857 9.46 0.00 0.00 2.32
180 181 1.974265 TCATGCAAACCGGAGACAAA 58.026 45.000 9.46 0.00 0.00 2.83
181 182 1.974265 TTCATGCAAACCGGAGACAA 58.026 45.000 9.46 0.00 0.00 3.18
182 183 1.974265 TTTCATGCAAACCGGAGACA 58.026 45.000 9.46 0.13 0.00 3.41
183 184 3.363341 TTTTTCATGCAAACCGGAGAC 57.637 42.857 9.46 0.00 0.00 3.36
200 201 4.209911 GCCGAGTAGTTTAGACGTGTTTTT 59.790 41.667 0.00 0.00 0.00 1.94
201 202 3.737774 GCCGAGTAGTTTAGACGTGTTTT 59.262 43.478 0.00 0.00 0.00 2.43
202 203 3.243501 TGCCGAGTAGTTTAGACGTGTTT 60.244 43.478 0.00 0.00 0.00 2.83
203 204 2.294233 TGCCGAGTAGTTTAGACGTGTT 59.706 45.455 0.00 0.00 0.00 3.32
204 205 1.881973 TGCCGAGTAGTTTAGACGTGT 59.118 47.619 0.00 0.00 0.00 4.49
205 206 2.161012 TCTGCCGAGTAGTTTAGACGTG 59.839 50.000 0.00 0.00 0.00 4.49
206 207 2.161211 GTCTGCCGAGTAGTTTAGACGT 59.839 50.000 0.00 0.00 0.00 4.34
207 208 2.477525 GGTCTGCCGAGTAGTTTAGACG 60.478 54.545 0.00 0.00 36.35 4.18
208 209 3.148026 GGTCTGCCGAGTAGTTTAGAC 57.852 52.381 0.00 0.00 35.13 2.59
223 224 2.540515 ACGCAGATTTGTATCGGTCTG 58.459 47.619 0.00 0.00 40.71 3.51
224 225 2.930040 CAACGCAGATTTGTATCGGTCT 59.070 45.455 0.00 0.00 35.85 3.85
225 226 2.030457 CCAACGCAGATTTGTATCGGTC 59.970 50.000 0.00 0.00 35.85 4.79
226 227 2.006888 CCAACGCAGATTTGTATCGGT 58.993 47.619 0.00 0.00 35.85 4.69
227 228 2.276201 TCCAACGCAGATTTGTATCGG 58.724 47.619 0.00 0.00 35.85 4.18
228 229 3.555547 TCATCCAACGCAGATTTGTATCG 59.444 43.478 0.00 0.00 35.85 2.92
229 230 4.332543 TGTCATCCAACGCAGATTTGTATC 59.667 41.667 0.00 0.00 0.00 2.24
230 231 4.260985 TGTCATCCAACGCAGATTTGTAT 58.739 39.130 0.00 0.00 0.00 2.29
231 232 3.669536 TGTCATCCAACGCAGATTTGTA 58.330 40.909 0.00 0.00 0.00 2.41
232 233 2.503331 TGTCATCCAACGCAGATTTGT 58.497 42.857 0.00 0.00 0.00 2.83
233 234 3.236816 GTTGTCATCCAACGCAGATTTG 58.763 45.455 0.00 0.00 43.71 2.32
234 235 3.559238 GTTGTCATCCAACGCAGATTT 57.441 42.857 0.00 0.00 43.71 2.17
250 251 3.269347 GCTGTGCGGACGTGTTGT 61.269 61.111 1.60 0.00 0.00 3.32
251 252 3.268603 TGCTGTGCGGACGTGTTG 61.269 61.111 1.60 0.00 0.00 3.33
252 253 3.269347 GTGCTGTGCGGACGTGTT 61.269 61.111 1.60 0.00 0.00 3.32
278 279 2.808958 CTCAAACCGCCCGCATACG 61.809 63.158 0.00 0.00 39.67 3.06
279 280 2.469516 CCTCAAACCGCCCGCATAC 61.470 63.158 0.00 0.00 0.00 2.39
280 281 2.124901 CCTCAAACCGCCCGCATA 60.125 61.111 0.00 0.00 0.00 3.14
289 290 0.893727 ACAATGCCGACCCTCAAACC 60.894 55.000 0.00 0.00 0.00 3.27
299 300 3.004326 GCATGCCCAACAATGCCGA 62.004 57.895 6.36 0.00 34.23 5.54
312 313 0.543749 AGGAGTGAGTAAGGGCATGC 59.456 55.000 9.90 9.90 0.00 4.06
313 314 4.835615 AGTATAGGAGTGAGTAAGGGCATG 59.164 45.833 0.00 0.00 0.00 4.06
318 319 8.387813 AGGAGATTAGTATAGGAGTGAGTAAGG 58.612 40.741 0.00 0.00 0.00 2.69
356 357 6.554334 TTGTGCCAAGATAAGAACTTGTAC 57.446 37.500 0.00 0.00 41.88 2.90
362 363 5.183904 ACTGGATTTGTGCCAAGATAAGAAC 59.816 40.000 0.00 0.00 34.44 3.01
446 448 4.615834 CTCGGCTCGCTCTACGGC 62.616 72.222 0.00 0.00 43.89 5.68
664 677 4.651008 TGTTCGCGGTCCACGGAC 62.651 66.667 6.13 7.75 44.51 4.79
776 789 0.181350 GCGGAGGGAAATGGATGAGT 59.819 55.000 0.00 0.00 0.00 3.41
864 880 9.881649 ATTATGATTACTGCGATTGATGATACT 57.118 29.630 0.00 0.00 0.00 2.12
877 893 9.282247 CTCAAAAACTCACATTATGATTACTGC 57.718 33.333 0.00 0.00 36.48 4.40
981 997 1.598962 CGCCCGATCTACCTACCGA 60.599 63.158 0.00 0.00 0.00 4.69
1298 1337 0.997196 GATTAGTGACGGCGTTGGAC 59.003 55.000 16.19 11.78 0.00 4.02
1347 1386 9.587772 CAAGTACTCCTACGTAGTAACTAGTAA 57.412 37.037 20.73 4.13 45.13 2.24
1399 1445 6.563222 AATTTGCAACCCTTTCATTTCATG 57.437 33.333 0.00 0.00 0.00 3.07
1403 1449 8.358895 CCATTTTAATTTGCAACCCTTTCATTT 58.641 29.630 0.00 0.00 0.00 2.32
1439 1485 7.965107 GCTGCCAACATATATTTAACTATCAGC 59.035 37.037 0.00 0.00 34.02 4.26
1440 1486 9.224267 AGCTGCCAACATATATTTAACTATCAG 57.776 33.333 0.00 0.00 0.00 2.90
1441 1487 9.002600 CAGCTGCCAACATATATTTAACTATCA 57.997 33.333 0.00 0.00 0.00 2.15
1442 1488 7.965107 GCAGCTGCCAACATATATTTAACTATC 59.035 37.037 28.76 0.00 34.31 2.08
1443 1489 7.667219 AGCAGCTGCCAACATATATTTAACTAT 59.333 33.333 34.39 6.48 43.38 2.12
1444 1490 6.998074 AGCAGCTGCCAACATATATTTAACTA 59.002 34.615 34.39 0.00 43.38 2.24
1445 1491 5.829924 AGCAGCTGCCAACATATATTTAACT 59.170 36.000 34.39 7.22 43.38 2.24
1447 1493 5.593909 ACAGCAGCTGCCAACATATATTTAA 59.406 36.000 34.39 0.00 43.38 1.52
1449 1495 3.956199 ACAGCAGCTGCCAACATATATTT 59.044 39.130 34.39 9.07 43.38 1.40
1452 1498 2.291365 CACAGCAGCTGCCAACATATA 58.709 47.619 34.39 0.00 43.38 0.86
1559 1607 2.356382 GACGAACTCCACGATCTGATCT 59.644 50.000 15.16 0.61 34.70 2.75
1677 1725 1.854280 AGGAGAGGAGATTACCGGAGT 59.146 52.381 9.46 0.00 34.73 3.85
1834 1894 8.618677 TCAGCTACATATACATACTTATACGCC 58.381 37.037 0.00 0.00 0.00 5.68
1884 1945 0.680061 GGCGTCCAGGTAATCCTAGG 59.320 60.000 0.82 0.82 43.07 3.02
2163 2237 9.716531 GATGAAGATGATGGTATTCATAGTTCA 57.283 33.333 11.25 11.25 39.41 3.18
2218 2300 9.013490 CCATTTTCATTTTCATATCAACGAGAC 57.987 33.333 0.00 0.00 0.00 3.36
2219 2301 8.190122 CCCATTTTCATTTTCATATCAACGAGA 58.810 33.333 0.00 0.00 0.00 4.04
2220 2302 8.190122 TCCCATTTTCATTTTCATATCAACGAG 58.810 33.333 0.00 0.00 0.00 4.18
2221 2303 7.973388 GTCCCATTTTCATTTTCATATCAACGA 59.027 33.333 0.00 0.00 0.00 3.85
2222 2304 7.044117 CGTCCCATTTTCATTTTCATATCAACG 60.044 37.037 0.00 0.00 0.00 4.10
2471 2577 2.568612 CGCTCCTCGAACTGCTCA 59.431 61.111 0.00 0.00 41.67 4.26
2585 2691 4.056050 GGGAGTAGTTATATTGCGTGTGG 58.944 47.826 0.00 0.00 0.00 4.17
2591 2697 3.258622 AGCGGAGGGAGTAGTTATATTGC 59.741 47.826 0.00 0.00 0.00 3.56
2611 2717 5.140747 AGTGAAGTAATATGGATCGGAGC 57.859 43.478 0.00 0.00 0.00 4.70
2632 2741 9.657419 AGCCAAGGAAAATTAATTAATGACAAG 57.343 29.630 11.42 0.29 0.00 3.16
2636 2745 8.144862 ACCAGCCAAGGAAAATTAATTAATGA 57.855 30.769 11.42 0.00 0.00 2.57
2637 2746 8.667463 CAACCAGCCAAGGAAAATTAATTAATG 58.333 33.333 11.42 0.00 0.00 1.90
2638 2747 7.828717 CCAACCAGCCAAGGAAAATTAATTAAT 59.171 33.333 4.81 4.81 0.00 1.40
2674 2865 2.849096 ATCCCACGTCCTAGTCGCCA 62.849 60.000 4.81 0.00 0.00 5.69
2734 2930 0.948623 TGGACATGACGTTGAAGGCG 60.949 55.000 0.00 0.00 0.00 5.52
3227 3426 7.914871 TGTTGCACAGAATTGTATGCATTATAC 59.085 33.333 9.57 5.50 41.68 1.47
3245 3697 8.005192 TGCCTTATTTATTCATATGTTGCACA 57.995 30.769 1.90 0.00 0.00 4.57
3253 3705 8.579863 GCCACTTTCTGCCTTATTTATTCATAT 58.420 33.333 0.00 0.00 0.00 1.78
3269 3721 2.162681 AGGAATTTCCGCCACTTTCTG 58.837 47.619 9.77 0.00 42.75 3.02
3270 3722 2.586648 AGGAATTTCCGCCACTTTCT 57.413 45.000 9.77 0.00 42.75 2.52
3271 3723 3.660501 AAAGGAATTTCCGCCACTTTC 57.339 42.857 9.77 0.00 42.75 2.62
3272 3724 3.494223 CCAAAAGGAATTTCCGCCACTTT 60.494 43.478 9.77 2.24 42.75 2.66
3273 3725 2.037121 CCAAAAGGAATTTCCGCCACTT 59.963 45.455 9.77 0.00 42.75 3.16
3274 3726 1.618343 CCAAAAGGAATTTCCGCCACT 59.382 47.619 9.77 0.00 42.75 4.00
3275 3727 1.616374 TCCAAAAGGAATTTCCGCCAC 59.384 47.619 9.77 0.00 42.75 5.01
3276 3728 1.892474 CTCCAAAAGGAATTTCCGCCA 59.108 47.619 9.77 0.00 42.75 5.69
3277 3729 1.404181 GCTCCAAAAGGAATTTCCGCC 60.404 52.381 9.77 0.00 42.75 6.13
3278 3730 1.546029 AGCTCCAAAAGGAATTTCCGC 59.454 47.619 9.77 5.58 42.75 5.54
3279 3731 2.159517 CGAGCTCCAAAAGGAATTTCCG 60.160 50.000 8.47 0.00 42.75 4.30
3280 3732 2.164422 CCGAGCTCCAAAAGGAATTTCC 59.836 50.000 8.47 7.39 36.58 3.13
3281 3733 2.416027 GCCGAGCTCCAAAAGGAATTTC 60.416 50.000 8.47 0.00 0.00 2.17
3282 3734 1.546029 GCCGAGCTCCAAAAGGAATTT 59.454 47.619 8.47 0.00 0.00 1.82
3283 3735 1.177401 GCCGAGCTCCAAAAGGAATT 58.823 50.000 8.47 0.00 0.00 2.17
3284 3736 0.681243 GGCCGAGCTCCAAAAGGAAT 60.681 55.000 8.47 0.00 0.00 3.01
3285 3737 1.303317 GGCCGAGCTCCAAAAGGAA 60.303 57.895 8.47 0.00 0.00 3.36
3286 3738 2.185310 GAGGCCGAGCTCCAAAAGGA 62.185 60.000 8.47 0.00 0.00 3.36
3287 3739 1.746991 GAGGCCGAGCTCCAAAAGG 60.747 63.158 8.47 4.02 0.00 3.11
3288 3740 1.746991 GGAGGCCGAGCTCCAAAAG 60.747 63.158 8.47 0.00 39.45 2.27
3289 3741 2.351276 GGAGGCCGAGCTCCAAAA 59.649 61.111 8.47 0.00 39.45 2.44
3290 3742 2.927856 TGGAGGCCGAGCTCCAAA 60.928 61.111 8.96 0.00 45.68 3.28
3292 3744 4.704103 ACTGGAGGCCGAGCTCCA 62.704 66.667 8.47 10.81 46.39 3.86
3293 3745 4.154347 CACTGGAGGCCGAGCTCC 62.154 72.222 8.47 0.00 40.05 4.70
3294 3746 3.071206 TCACTGGAGGCCGAGCTC 61.071 66.667 2.73 2.73 0.00 4.09
3295 3747 3.073735 CTCACTGGAGGCCGAGCT 61.074 66.667 0.00 0.00 37.51 4.09
3303 3755 0.622665 ATTTGGAGGCCTCACTGGAG 59.377 55.000 33.29 0.00 41.02 3.86
3304 3756 1.004745 GAATTTGGAGGCCTCACTGGA 59.995 52.381 33.29 14.64 38.35 3.86
3305 3757 1.272092 TGAATTTGGAGGCCTCACTGG 60.272 52.381 33.29 0.00 39.35 4.00
3306 3758 2.205022 TGAATTTGGAGGCCTCACTG 57.795 50.000 33.29 0.00 0.00 3.66
3307 3759 2.978156 TTGAATTTGGAGGCCTCACT 57.022 45.000 33.29 12.66 0.00 3.41
3308 3760 4.541973 AATTTGAATTTGGAGGCCTCAC 57.458 40.909 33.29 22.31 0.00 3.51
3334 3786 8.459521 TGCAAAAATATGAATTTCGACGAAAT 57.540 26.923 26.09 26.09 43.07 2.17
3335 3787 7.859613 TGCAAAAATATGAATTTCGACGAAA 57.140 28.000 23.98 23.98 34.12 3.46
3336 3788 8.459521 AATGCAAAAATATGAATTTCGACGAA 57.540 26.923 6.10 6.10 34.12 3.85
3337 3789 8.459521 AAATGCAAAAATATGAATTTCGACGA 57.540 26.923 0.00 0.00 34.11 4.20
3338 3790 8.723618 GAAATGCAAAAATATGAATTTCGACG 57.276 30.769 5.28 0.00 42.51 5.12
3375 3827 9.851686 TGCCTTCATGTATATCAGTATTTTTCT 57.148 29.630 0.00 0.00 0.00 2.52
3381 3833 9.658799 GTGTTATGCCTTCATGTATATCAGTAT 57.341 33.333 0.00 0.00 34.22 2.12
3382 3834 8.646900 TGTGTTATGCCTTCATGTATATCAGTA 58.353 33.333 0.00 0.00 34.22 2.74
3383 3835 7.442364 GTGTGTTATGCCTTCATGTATATCAGT 59.558 37.037 0.00 0.00 34.22 3.41
3384 3836 7.442062 TGTGTGTTATGCCTTCATGTATATCAG 59.558 37.037 0.00 0.00 34.22 2.90
3385 3837 7.278875 TGTGTGTTATGCCTTCATGTATATCA 58.721 34.615 0.00 0.00 34.22 2.15
3386 3838 7.728847 TGTGTGTTATGCCTTCATGTATATC 57.271 36.000 0.00 0.00 34.22 1.63
3387 3839 7.720957 ACATGTGTGTTATGCCTTCATGTATAT 59.279 33.333 0.00 0.00 41.23 0.86
3388 3840 7.012232 CACATGTGTGTTATGCCTTCATGTATA 59.988 37.037 18.03 0.00 41.14 1.47
3389 3841 5.887598 ACATGTGTGTTATGCCTTCATGTAT 59.112 36.000 0.00 0.00 41.23 2.29
3390 3842 5.123661 CACATGTGTGTTATGCCTTCATGTA 59.876 40.000 18.03 0.00 41.14 2.29
3391 3843 4.081406 ACATGTGTGTTATGCCTTCATGT 58.919 39.130 0.00 0.00 39.25 3.21
3392 3844 4.417506 CACATGTGTGTTATGCCTTCATG 58.582 43.478 18.03 0.00 40.96 3.07
3393 3845 4.707030 CACATGTGTGTTATGCCTTCAT 57.293 40.909 18.03 0.00 40.96 2.57
3408 3860 8.994429 TTTGAACTGAAAATTTACACACATGT 57.006 26.923 0.00 0.00 43.30 3.21
3423 3875 9.695526 CCTCATTTCAATGTATTTTGAACTGAA 57.304 29.630 15.90 5.83 46.03 3.02
3424 3876 8.306038 CCCTCATTTCAATGTATTTTGAACTGA 58.694 33.333 14.93 14.93 45.33 3.41
3425 3877 8.306038 TCCCTCATTTCAATGTATTTTGAACTG 58.694 33.333 9.63 9.63 43.38 3.16
3426 3878 8.421249 TCCCTCATTTCAATGTATTTTGAACT 57.579 30.769 0.00 0.00 43.38 3.01
3427 3879 9.090692 CATCCCTCATTTCAATGTATTTTGAAC 57.909 33.333 0.00 0.00 43.38 3.18
3428 3880 8.814931 ACATCCCTCATTTCAATGTATTTTGAA 58.185 29.630 0.00 0.00 42.33 2.69
3429 3881 8.252417 CACATCCCTCATTTCAATGTATTTTGA 58.748 33.333 0.00 0.00 37.65 2.69
3430 3882 7.010738 GCACATCCCTCATTTCAATGTATTTTG 59.989 37.037 0.00 0.00 37.65 2.44
3431 3883 7.043565 GCACATCCCTCATTTCAATGTATTTT 58.956 34.615 0.00 0.00 37.65 1.82
3432 3884 6.154877 TGCACATCCCTCATTTCAATGTATTT 59.845 34.615 0.00 0.00 37.65 1.40
3433 3885 5.657745 TGCACATCCCTCATTTCAATGTATT 59.342 36.000 0.00 0.00 37.65 1.89
3434 3886 5.202765 TGCACATCCCTCATTTCAATGTAT 58.797 37.500 0.00 0.00 37.65 2.29
3435 3887 4.598022 TGCACATCCCTCATTTCAATGTA 58.402 39.130 0.00 0.00 37.65 2.29
3436 3888 3.433343 TGCACATCCCTCATTTCAATGT 58.567 40.909 0.00 0.00 37.65 2.71
3437 3889 4.459390 TTGCACATCCCTCATTTCAATG 57.541 40.909 0.00 0.00 37.75 2.82
3438 3890 5.486735 TTTTGCACATCCCTCATTTCAAT 57.513 34.783 0.00 0.00 0.00 2.57
3439 3891 4.952071 TTTTGCACATCCCTCATTTCAA 57.048 36.364 0.00 0.00 0.00 2.69
3440 3892 4.952071 TTTTTGCACATCCCTCATTTCA 57.048 36.364 0.00 0.00 0.00 2.69
3458 3910 9.098355 GTTAAAAAGCCTCAGATTTGTCTTTTT 57.902 29.630 19.16 19.16 39.51 1.94
3459 3911 8.257306 TGTTAAAAAGCCTCAGATTTGTCTTTT 58.743 29.630 0.00 0.00 34.42 2.27
3460 3912 7.706607 GTGTTAAAAAGCCTCAGATTTGTCTTT 59.293 33.333 0.00 0.00 30.45 2.52
3461 3913 7.203218 GTGTTAAAAAGCCTCAGATTTGTCTT 58.797 34.615 0.00 0.00 30.45 3.01
3462 3914 6.513393 CGTGTTAAAAAGCCTCAGATTTGTCT 60.513 38.462 0.00 0.00 30.45 3.41
3463 3915 5.625311 CGTGTTAAAAAGCCTCAGATTTGTC 59.375 40.000 0.00 0.00 30.45 3.18
3464 3916 5.067283 ACGTGTTAAAAAGCCTCAGATTTGT 59.933 36.000 0.00 0.00 30.45 2.83
3465 3917 5.399301 CACGTGTTAAAAAGCCTCAGATTTG 59.601 40.000 7.58 0.00 30.45 2.32
3466 3918 5.298276 TCACGTGTTAAAAAGCCTCAGATTT 59.702 36.000 16.51 0.00 31.52 2.17
3467 3919 4.819630 TCACGTGTTAAAAAGCCTCAGATT 59.180 37.500 16.51 0.00 0.00 2.40
3468 3920 4.385825 TCACGTGTTAAAAAGCCTCAGAT 58.614 39.130 16.51 0.00 0.00 2.90
3469 3921 3.799366 TCACGTGTTAAAAAGCCTCAGA 58.201 40.909 16.51 0.00 0.00 3.27
3470 3922 4.749245 ATCACGTGTTAAAAAGCCTCAG 57.251 40.909 16.51 0.00 0.00 3.35
3471 3923 5.302360 AGTATCACGTGTTAAAAAGCCTCA 58.698 37.500 16.51 0.00 0.00 3.86
3472 3924 5.857822 AGTATCACGTGTTAAAAAGCCTC 57.142 39.130 16.51 0.00 0.00 4.70
3473 3925 7.604927 TGAATAGTATCACGTGTTAAAAAGCCT 59.395 33.333 16.51 6.46 0.00 4.58
3474 3926 7.745015 TGAATAGTATCACGTGTTAAAAAGCC 58.255 34.615 16.51 0.00 0.00 4.35
3475 3927 9.422196 GATGAATAGTATCACGTGTTAAAAAGC 57.578 33.333 16.51 0.00 30.82 3.51
3476 3928 9.916397 GGATGAATAGTATCACGTGTTAAAAAG 57.084 33.333 16.51 0.00 30.82 2.27
3477 3929 9.661563 AGGATGAATAGTATCACGTGTTAAAAA 57.338 29.630 16.51 0.00 30.82 1.94
3478 3930 9.661563 AAGGATGAATAGTATCACGTGTTAAAA 57.338 29.630 16.51 3.74 30.82 1.52
3479 3931 9.309516 GAAGGATGAATAGTATCACGTGTTAAA 57.690 33.333 16.51 4.09 30.82 1.52
3480 3932 7.924412 GGAAGGATGAATAGTATCACGTGTTAA 59.076 37.037 16.51 0.00 30.82 2.01
3481 3933 7.431249 GGAAGGATGAATAGTATCACGTGTTA 58.569 38.462 16.51 8.99 30.82 2.41
3482 3934 6.281405 GGAAGGATGAATAGTATCACGTGTT 58.719 40.000 16.51 10.15 30.82 3.32
3483 3935 5.507482 CGGAAGGATGAATAGTATCACGTGT 60.507 44.000 16.51 5.66 30.82 4.49
3484 3936 4.917998 CGGAAGGATGAATAGTATCACGTG 59.082 45.833 9.94 9.94 30.82 4.49
3485 3937 5.122512 CGGAAGGATGAATAGTATCACGT 57.877 43.478 0.00 0.00 30.82 4.49
3502 3954 1.134946 GACAAATTCATGGGCCGGAAG 59.865 52.381 5.05 5.56 0.00 3.46
3503 3955 1.181786 GACAAATTCATGGGCCGGAA 58.818 50.000 5.05 12.13 0.00 4.30
3504 3956 1.029408 CGACAAATTCATGGGCCGGA 61.029 55.000 5.05 0.00 0.00 5.14
3505 3957 1.312371 ACGACAAATTCATGGGCCGG 61.312 55.000 0.00 0.00 0.00 6.13
3506 3958 0.525761 AACGACAAATTCATGGGCCG 59.474 50.000 0.00 0.00 0.00 6.13
3507 3959 2.741759 AAACGACAAATTCATGGGCC 57.258 45.000 0.00 0.00 0.00 5.80
3508 3960 3.807071 ACAAAAACGACAAATTCATGGGC 59.193 39.130 0.00 0.00 0.00 5.36
3509 3961 5.980116 TGTACAAAAACGACAAATTCATGGG 59.020 36.000 0.00 0.00 0.00 4.00
3510 3962 6.143758 CCTGTACAAAAACGACAAATTCATGG 59.856 38.462 0.00 0.00 0.00 3.66
3511 3963 6.695278 ACCTGTACAAAAACGACAAATTCATG 59.305 34.615 0.00 0.00 0.00 3.07
3512 3964 6.801575 ACCTGTACAAAAACGACAAATTCAT 58.198 32.000 0.00 0.00 0.00 2.57
3513 3965 6.197364 ACCTGTACAAAAACGACAAATTCA 57.803 33.333 0.00 0.00 0.00 2.57
3514 3966 5.394322 CGACCTGTACAAAAACGACAAATTC 59.606 40.000 0.00 0.00 0.00 2.17
3515 3967 5.267776 CGACCTGTACAAAAACGACAAATT 58.732 37.500 0.00 0.00 0.00 1.82
3516 3968 4.787245 GCGACCTGTACAAAAACGACAAAT 60.787 41.667 12.95 0.00 0.00 2.32
3517 3969 3.485546 GCGACCTGTACAAAAACGACAAA 60.486 43.478 12.95 0.00 0.00 2.83
3518 3970 2.030701 GCGACCTGTACAAAAACGACAA 59.969 45.455 12.95 0.00 0.00 3.18
3519 3971 1.593933 GCGACCTGTACAAAAACGACA 59.406 47.619 12.95 0.00 0.00 4.35
3520 3972 1.593933 TGCGACCTGTACAAAAACGAC 59.406 47.619 12.95 7.01 0.00 4.34
3521 3973 1.937278 TGCGACCTGTACAAAAACGA 58.063 45.000 12.95 0.39 0.00 3.85
3522 3974 2.031191 AGTTGCGACCTGTACAAAAACG 59.969 45.455 0.00 2.26 0.00 3.60
3523 3975 3.064271 TGAGTTGCGACCTGTACAAAAAC 59.936 43.478 0.00 0.00 0.00 2.43
3524 3976 3.271729 TGAGTTGCGACCTGTACAAAAA 58.728 40.909 0.00 0.00 0.00 1.94
3525 3977 2.907634 TGAGTTGCGACCTGTACAAAA 58.092 42.857 0.00 0.00 0.00 2.44
3526 3978 2.605837 TGAGTTGCGACCTGTACAAA 57.394 45.000 0.00 0.00 0.00 2.83
3527 3979 2.479837 CTTGAGTTGCGACCTGTACAA 58.520 47.619 0.00 0.09 0.00 2.41
3528 3980 1.270094 CCTTGAGTTGCGACCTGTACA 60.270 52.381 0.00 0.00 0.00 2.90
3529 3981 1.270147 ACCTTGAGTTGCGACCTGTAC 60.270 52.381 0.00 0.00 0.00 2.90
3530 3982 1.045407 ACCTTGAGTTGCGACCTGTA 58.955 50.000 0.00 0.00 0.00 2.74
3531 3983 1.045407 TACCTTGAGTTGCGACCTGT 58.955 50.000 0.00 0.00 0.00 4.00
3532 3984 2.386661 ATACCTTGAGTTGCGACCTG 57.613 50.000 0.00 0.00 0.00 4.00
3533 3985 3.244422 TGAAATACCTTGAGTTGCGACCT 60.244 43.478 0.00 0.00 0.00 3.85
3534 3986 3.071479 TGAAATACCTTGAGTTGCGACC 58.929 45.455 0.00 0.00 0.00 4.79
3535 3987 4.391830 TGATGAAATACCTTGAGTTGCGAC 59.608 41.667 0.00 0.00 0.00 5.19
3536 3988 4.574892 TGATGAAATACCTTGAGTTGCGA 58.425 39.130 0.00 0.00 0.00 5.10
3537 3989 4.944962 TGATGAAATACCTTGAGTTGCG 57.055 40.909 0.00 0.00 0.00 4.85
3538 3990 6.441093 TCATGATGAAATACCTTGAGTTGC 57.559 37.500 0.00 0.00 0.00 4.17
3539 3991 9.865321 AAATTCATGATGAAATACCTTGAGTTG 57.135 29.630 12.36 0.00 40.12 3.16
3575 4027 6.128499 GCGTGTATGTAAAGATGTAAACCACA 60.128 38.462 0.00 0.00 42.69 4.17
3576 4028 6.128499 TGCGTGTATGTAAAGATGTAAACCAC 60.128 38.462 0.00 0.00 0.00 4.16
3577 4029 5.932883 TGCGTGTATGTAAAGATGTAAACCA 59.067 36.000 0.00 0.00 0.00 3.67
3578 4030 6.411630 TGCGTGTATGTAAAGATGTAAACC 57.588 37.500 0.00 0.00 0.00 3.27
3641 4093 7.995488 TGGAGGCCTTTATTTTTGAAAAATTCA 59.005 29.630 19.57 6.12 38.04 2.57
3642 4094 8.389779 TGGAGGCCTTTATTTTTGAAAAATTC 57.610 30.769 19.57 9.97 0.00 2.17
3643 4095 8.795513 CATGGAGGCCTTTATTTTTGAAAAATT 58.204 29.630 19.57 1.63 0.00 1.82
3644 4096 8.162746 TCATGGAGGCCTTTATTTTTGAAAAAT 58.837 29.630 18.56 18.56 0.00 1.82
3645 4097 7.512992 TCATGGAGGCCTTTATTTTTGAAAAA 58.487 30.769 6.77 5.47 0.00 1.94
3646 4098 7.072263 TCATGGAGGCCTTTATTTTTGAAAA 57.928 32.000 6.77 0.00 0.00 2.29
3647 4099 6.678568 TCATGGAGGCCTTTATTTTTGAAA 57.321 33.333 6.77 0.00 0.00 2.69
3648 4100 6.678568 TTCATGGAGGCCTTTATTTTTGAA 57.321 33.333 6.77 7.36 0.00 2.69
3649 4101 5.337491 GCTTCATGGAGGCCTTTATTTTTGA 60.337 40.000 6.77 0.90 0.00 2.69
3650 4102 4.872124 GCTTCATGGAGGCCTTTATTTTTG 59.128 41.667 6.77 0.00 0.00 2.44
3651 4103 4.779489 AGCTTCATGGAGGCCTTTATTTTT 59.221 37.500 6.77 0.00 35.17 1.94
3652 4104 4.356436 AGCTTCATGGAGGCCTTTATTTT 58.644 39.130 6.77 0.00 35.17 1.82
3653 4105 3.956848 GAGCTTCATGGAGGCCTTTATTT 59.043 43.478 6.77 0.00 35.17 1.40
3654 4106 3.560105 GAGCTTCATGGAGGCCTTTATT 58.440 45.455 6.77 0.00 35.17 1.40
3655 4107 2.486191 CGAGCTTCATGGAGGCCTTTAT 60.486 50.000 6.77 0.95 35.17 1.40
3656 4108 1.134401 CGAGCTTCATGGAGGCCTTTA 60.134 52.381 6.77 0.00 35.17 1.85
3657 4109 0.393537 CGAGCTTCATGGAGGCCTTT 60.394 55.000 6.77 0.00 35.17 3.11
3658 4110 1.222936 CGAGCTTCATGGAGGCCTT 59.777 57.895 6.77 0.00 35.17 4.35
3659 4111 2.739996 CCGAGCTTCATGGAGGCCT 61.740 63.158 3.86 3.86 35.17 5.19
3660 4112 2.203126 CCGAGCTTCATGGAGGCC 60.203 66.667 2.40 0.00 35.17 5.19
3661 4113 2.899339 GCCGAGCTTCATGGAGGC 60.899 66.667 2.40 0.00 37.61 4.70
3662 4114 2.203126 GGCCGAGCTTCATGGAGG 60.203 66.667 2.40 0.00 0.00 4.30
3663 4115 1.227497 GAGGCCGAGCTTCATGGAG 60.227 63.158 0.00 0.00 34.72 3.86
3664 4116 2.735772 GGAGGCCGAGCTTCATGGA 61.736 63.158 0.00 0.00 36.34 3.41
3665 4117 2.203126 GGAGGCCGAGCTTCATGG 60.203 66.667 0.00 0.00 36.34 3.66
3666 4118 0.677731 TTTGGAGGCCGAGCTTCATG 60.678 55.000 0.00 0.00 36.34 3.07
3667 4119 0.038166 TTTTGGAGGCCGAGCTTCAT 59.962 50.000 0.00 0.00 36.34 2.57
3668 4120 0.606401 CTTTTGGAGGCCGAGCTTCA 60.606 55.000 0.00 0.00 36.34 3.02
3669 4121 1.308783 CCTTTTGGAGGCCGAGCTTC 61.309 60.000 0.00 0.35 44.07 3.86
3670 4122 1.303643 CCTTTTGGAGGCCGAGCTT 60.304 57.895 0.00 0.00 44.07 3.74
3671 4123 2.352805 CCTTTTGGAGGCCGAGCT 59.647 61.111 0.00 0.00 44.07 4.09
3679 4131 1.905215 TCTGAGAGAGGCCTTTTGGAG 59.095 52.381 6.77 0.70 44.07 3.86
3680 4132 2.030027 TCTGAGAGAGGCCTTTTGGA 57.970 50.000 6.77 0.00 44.07 3.53
3681 4133 2.867109 TTCTGAGAGAGGCCTTTTGG 57.133 50.000 6.77 0.00 44.18 3.28
3682 4134 3.501445 CACTTTCTGAGAGAGGCCTTTTG 59.499 47.826 6.77 0.00 0.00 2.44
3683 4135 3.497584 CCACTTTCTGAGAGAGGCCTTTT 60.498 47.826 6.77 0.00 0.00 2.27
3684 4136 2.039613 CCACTTTCTGAGAGAGGCCTTT 59.960 50.000 6.77 0.00 0.00 3.11
3685 4137 1.627834 CCACTTTCTGAGAGAGGCCTT 59.372 52.381 6.77 0.00 0.00 4.35
3686 4138 1.274712 CCACTTTCTGAGAGAGGCCT 58.725 55.000 3.86 3.86 0.00 5.19
3687 4139 0.980423 ACCACTTTCTGAGAGAGGCC 59.020 55.000 10.83 0.00 0.00 5.19
3688 4140 3.963428 TTACCACTTTCTGAGAGAGGC 57.037 47.619 10.83 0.00 0.00 4.70
3689 4141 6.936279 TGTAATTACCACTTTCTGAGAGAGG 58.064 40.000 13.01 9.60 0.00 3.69
3705 4157 7.914537 GCAGGTGCAAAGATAATGTAATTAC 57.085 36.000 8.75 8.75 40.47 1.89
3726 4178 2.759538 GGTACGTACTCTAGCTGCAG 57.240 55.000 24.07 10.11 0.00 4.41
3848 4305 4.537015 GACGACAAGGGAAATTCTGTTTG 58.463 43.478 0.00 0.00 0.00 2.93
3860 4317 0.460311 ATAGCGAAGGACGACAAGGG 59.540 55.000 0.00 0.00 45.77 3.95
3861 4318 1.560923 CATAGCGAAGGACGACAAGG 58.439 55.000 0.00 0.00 45.77 3.61
3862 4319 0.924090 GCATAGCGAAGGACGACAAG 59.076 55.000 0.00 0.00 45.77 3.16
3863 4320 0.459585 GGCATAGCGAAGGACGACAA 60.460 55.000 0.00 0.00 45.77 3.18
3864 4321 1.141019 GGCATAGCGAAGGACGACA 59.859 57.895 0.00 0.00 45.77 4.35
3865 4322 1.944676 CGGCATAGCGAAGGACGAC 60.945 63.158 0.00 0.00 45.77 4.34
3866 4323 1.940883 AACGGCATAGCGAAGGACGA 61.941 55.000 8.98 0.00 45.77 4.20
3867 4324 1.082117 AAACGGCATAGCGAAGGACG 61.082 55.000 0.35 0.35 45.66 4.79
3868 4325 1.062148 GAAAACGGCATAGCGAAGGAC 59.938 52.381 0.00 0.00 0.00 3.85
3869 4326 1.338294 TGAAAACGGCATAGCGAAGGA 60.338 47.619 0.00 0.00 0.00 3.36
3870 4327 1.083489 TGAAAACGGCATAGCGAAGG 58.917 50.000 0.00 0.00 0.00 3.46
3871 4328 2.774007 CTTGAAAACGGCATAGCGAAG 58.226 47.619 0.00 0.00 0.00 3.79
3872 4329 1.135803 GCTTGAAAACGGCATAGCGAA 60.136 47.619 0.00 0.00 0.00 4.70
3873 4330 0.446222 GCTTGAAAACGGCATAGCGA 59.554 50.000 0.00 0.00 0.00 4.93
3874 4331 0.857311 CGCTTGAAAACGGCATAGCG 60.857 55.000 0.00 0.00 44.18 4.26
3875 4332 0.523335 CCGCTTGAAAACGGCATAGC 60.523 55.000 0.00 0.00 43.44 2.97
3876 4333 3.604130 CCGCTTGAAAACGGCATAG 57.396 52.632 0.00 0.00 43.44 2.23
3882 4339 3.928618 GAGGCGCCGCTTGAAAACG 62.929 63.158 24.06 0.00 0.00 3.60
3883 4340 2.126850 GAGGCGCCGCTTGAAAAC 60.127 61.111 24.06 2.68 0.00 2.43
3884 4341 3.722295 CGAGGCGCCGCTTGAAAA 61.722 61.111 27.85 0.00 0.00 2.29
3885 4342 4.980805 ACGAGGCGCCGCTTGAAA 62.981 61.111 27.85 0.00 0.00 2.69
3893 4350 4.821589 CAAGGGAGACGAGGCGCC 62.822 72.222 21.89 21.89 0.00 6.53
3894 4351 3.991536 GACAAGGGAGACGAGGCGC 62.992 68.421 0.00 0.00 0.00 6.53
3895 4352 2.182030 GACAAGGGAGACGAGGCG 59.818 66.667 0.00 0.00 0.00 5.52
3896 4353 2.182030 CGACAAGGGAGACGAGGC 59.818 66.667 0.00 0.00 0.00 4.70
3897 4354 1.213013 CACGACAAGGGAGACGAGG 59.787 63.158 0.00 0.00 0.00 4.63
3898 4355 1.444553 GCACGACAAGGGAGACGAG 60.445 63.158 0.00 0.00 0.00 4.18
3899 4356 1.901948 AGCACGACAAGGGAGACGA 60.902 57.895 0.00 0.00 0.00 4.20
3900 4357 1.734477 CAGCACGACAAGGGAGACG 60.734 63.158 0.00 0.00 0.00 4.18
3901 4358 2.029844 GCAGCACGACAAGGGAGAC 61.030 63.158 0.00 0.00 0.00 3.36
3902 4359 2.343758 GCAGCACGACAAGGGAGA 59.656 61.111 0.00 0.00 0.00 3.71
3903 4360 2.743928 GGCAGCACGACAAGGGAG 60.744 66.667 0.00 0.00 0.00 4.30
3904 4361 4.680237 CGGCAGCACGACAAGGGA 62.680 66.667 0.00 0.00 35.47 4.20
3905 4362 4.988598 ACGGCAGCACGACAAGGG 62.989 66.667 9.87 0.00 37.61 3.95
3906 4363 2.542907 AAACGGCAGCACGACAAGG 61.543 57.895 9.87 0.00 37.61 3.61
3907 4364 1.369209 CAAACGGCAGCACGACAAG 60.369 57.895 9.87 0.00 37.61 3.16
3908 4365 1.815840 TCAAACGGCAGCACGACAA 60.816 52.632 9.87 0.00 37.61 3.18
3909 4366 2.202946 TCAAACGGCAGCACGACA 60.203 55.556 9.87 0.00 37.61 4.35
3910 4367 2.248431 GTCAAACGGCAGCACGAC 59.752 61.111 9.87 0.00 37.61 4.34
3911 4368 2.970324 GGTCAAACGGCAGCACGA 60.970 61.111 9.87 0.00 37.61 4.35
3912 4369 2.972505 AGGTCAAACGGCAGCACG 60.973 61.111 0.00 0.00 40.31 5.34
3913 4370 2.639286 CAGGTCAAACGGCAGCAC 59.361 61.111 0.00 0.00 0.00 4.40
3914 4371 2.594303 CCAGGTCAAACGGCAGCA 60.594 61.111 0.00 0.00 0.00 4.41
3915 4372 2.594592 ACCAGGTCAAACGGCAGC 60.595 61.111 0.00 0.00 0.00 5.25
3916 4373 0.535102 AAGACCAGGTCAAACGGCAG 60.535 55.000 22.31 0.00 34.60 4.85
3917 4374 0.817634 CAAGACCAGGTCAAACGGCA 60.818 55.000 22.31 0.00 34.60 5.69
3918 4375 1.515521 CCAAGACCAGGTCAAACGGC 61.516 60.000 22.31 0.00 34.60 5.68
3919 4376 1.515521 GCCAAGACCAGGTCAAACGG 61.516 60.000 22.31 15.68 34.60 4.44
3920 4377 1.515521 GGCCAAGACCAGGTCAAACG 61.516 60.000 22.31 6.96 34.60 3.60
3921 4378 0.467290 TGGCCAAGACCAGGTCAAAC 60.467 55.000 22.31 7.77 37.92 2.93
3922 4379 0.467290 GTGGCCAAGACCAGGTCAAA 60.467 55.000 22.31 0.00 43.39 2.69
3923 4380 1.150536 GTGGCCAAGACCAGGTCAA 59.849 57.895 22.31 0.00 43.39 3.18
3924 4381 2.829384 GGTGGCCAAGACCAGGTCA 61.829 63.158 22.31 0.00 41.46 4.02
3925 4382 2.034221 GGTGGCCAAGACCAGGTC 59.966 66.667 7.24 12.25 41.46 3.85
3926 4383 3.580319 GGGTGGCCAAGACCAGGT 61.580 66.667 7.24 0.00 41.46 4.00
3927 4384 4.366684 GGGGTGGCCAAGACCAGG 62.367 72.222 20.36 0.00 41.46 4.45
3928 4385 3.260100 AGGGGTGGCCAAGACCAG 61.260 66.667 20.36 0.00 41.46 4.00
3929 4386 3.579302 CAGGGGTGGCCAAGACCA 61.579 66.667 20.36 0.00 37.38 4.02
3930 4387 3.580319 ACAGGGGTGGCCAAGACC 61.580 66.667 7.24 10.82 0.00 3.85
3931 4388 2.282462 CACAGGGGTGGCCAAGAC 60.282 66.667 7.24 0.00 41.45 3.01
3932 4389 4.284550 GCACAGGGGTGGCCAAGA 62.285 66.667 7.24 0.00 45.38 3.02
3955 4412 0.095417 GAGAACAGAAATGCCGTCGC 59.905 55.000 0.00 0.00 0.00 5.19
3956 4413 0.721718 GGAGAACAGAAATGCCGTCG 59.278 55.000 0.00 0.00 0.00 5.12
3957 4414 1.087501 GGGAGAACAGAAATGCCGTC 58.912 55.000 0.00 0.00 0.00 4.79
3958 4415 0.673644 CGGGAGAACAGAAATGCCGT 60.674 55.000 0.00 0.00 42.26 5.68
3959 4416 2.089854 CGGGAGAACAGAAATGCCG 58.910 57.895 0.00 0.00 41.54 5.69
3960 4417 1.657751 GGCGGGAGAACAGAAATGCC 61.658 60.000 0.00 0.00 0.00 4.40
3961 4418 1.803289 GGCGGGAGAACAGAAATGC 59.197 57.895 0.00 0.00 0.00 3.56
3962 4419 1.982073 GCGGCGGGAGAACAGAAATG 61.982 60.000 9.78 0.00 0.00 2.32
3963 4420 1.745489 GCGGCGGGAGAACAGAAAT 60.745 57.895 9.78 0.00 0.00 2.17
3964 4421 2.358247 GCGGCGGGAGAACAGAAA 60.358 61.111 9.78 0.00 0.00 2.52
3965 4422 3.296709 GAGCGGCGGGAGAACAGAA 62.297 63.158 9.78 0.00 0.00 3.02
3966 4423 3.760035 GAGCGGCGGGAGAACAGA 61.760 66.667 9.78 0.00 0.00 3.41
3967 4424 2.788191 AAAGAGCGGCGGGAGAACAG 62.788 60.000 9.78 0.00 0.00 3.16
3968 4425 2.879233 AAAGAGCGGCGGGAGAACA 61.879 57.895 9.78 0.00 0.00 3.18
3969 4426 2.047179 AAAGAGCGGCGGGAGAAC 60.047 61.111 9.78 0.00 0.00 3.01
3970 4427 2.047274 CAAAGAGCGGCGGGAGAA 60.047 61.111 9.78 0.00 0.00 2.87
3971 4428 4.082523 CCAAAGAGCGGCGGGAGA 62.083 66.667 9.78 0.00 0.00 3.71
3978 4435 4.394712 ACGGAGGCCAAAGAGCGG 62.395 66.667 5.01 0.00 0.00 5.52
3979 4436 2.815647 GACGGAGGCCAAAGAGCG 60.816 66.667 5.01 0.00 0.00 5.03
3980 4437 2.436824 GGACGGAGGCCAAAGAGC 60.437 66.667 5.01 0.00 0.00 4.09
3981 4438 0.036875 AAAGGACGGAGGCCAAAGAG 59.963 55.000 5.01 0.00 0.00 2.85
3982 4439 0.250727 CAAAGGACGGAGGCCAAAGA 60.251 55.000 5.01 0.00 0.00 2.52
3983 4440 0.537371 ACAAAGGACGGAGGCCAAAG 60.537 55.000 5.01 0.00 0.00 2.77
3984 4441 0.821711 CACAAAGGACGGAGGCCAAA 60.822 55.000 5.01 0.00 0.00 3.28
3985 4442 1.228124 CACAAAGGACGGAGGCCAA 60.228 57.895 5.01 0.00 0.00 4.52
3986 4443 2.391724 GACACAAAGGACGGAGGCCA 62.392 60.000 5.01 0.00 0.00 5.36
3987 4444 1.671379 GACACAAAGGACGGAGGCC 60.671 63.158 0.00 0.00 0.00 5.19
3988 4445 0.670854 GAGACACAAAGGACGGAGGC 60.671 60.000 0.00 0.00 0.00 4.70
3989 4446 0.679505 TGAGACACAAAGGACGGAGG 59.320 55.000 0.00 0.00 0.00 4.30
3990 4447 2.029020 TGATGAGACACAAAGGACGGAG 60.029 50.000 0.00 0.00 0.00 4.63
3991 4448 1.967779 TGATGAGACACAAAGGACGGA 59.032 47.619 0.00 0.00 0.00 4.69
3992 4449 2.029020 TCTGATGAGACACAAAGGACGG 60.029 50.000 0.00 0.00 0.00 4.79
3993 4450 3.303881 TCTGATGAGACACAAAGGACG 57.696 47.619 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.