Multiple sequence alignment - TraesCS3D01G295700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G295700 chr3D 100.000 2276 0 0 1 2276 408330892 408333167 0.000000e+00 4204
1 TraesCS3D01G295700 chr3D 87.747 253 31 0 2024 2276 219235142 219235394 1.710000e-76 296
2 TraesCS3D01G295700 chr7B 94.781 1303 67 1 1 1302 660722728 660721426 0.000000e+00 2028
3 TraesCS3D01G295700 chr7B 92.934 1302 75 7 2 1302 675350972 675349687 0.000000e+00 1879
4 TraesCS3D01G295700 chr4B 94.411 984 53 2 321 1302 582146731 582145748 0.000000e+00 1511
5 TraesCS3D01G295700 chr4B 94.290 613 35 0 689 1301 1119970 1120582 0.000000e+00 939
6 TraesCS3D01G295700 chr4B 80.866 554 64 17 1490 2017 639443173 639442636 4.560000e-107 398
7 TraesCS3D01G295700 chr4B 95.098 102 4 1 1399 1499 392446874 392446773 2.340000e-35 159
8 TraesCS3D01G295700 chr6A 85.485 1309 182 5 3 1307 565319099 565317795 0.000000e+00 1358
9 TraesCS3D01G295700 chr6A 81.250 560 60 20 1490 2021 326745231 326745773 5.850000e-111 411
10 TraesCS3D01G295700 chr3A 85.126 1311 168 16 3 1307 212135665 212134376 0.000000e+00 1315
11 TraesCS3D01G295700 chr3A 91.373 255 20 1 2024 2276 293059110 293059364 4.650000e-92 348
12 TraesCS3D01G295700 chr3A 94.000 100 3 3 1397 1494 648870439 648870537 5.070000e-32 148
13 TraesCS3D01G295700 chr1D 84.763 1306 195 4 3 1306 53959826 53958523 0.000000e+00 1306
14 TraesCS3D01G295700 chr1D 76.853 1309 289 13 1 1302 375358615 375359916 0.000000e+00 726
15 TraesCS3D01G295700 chr1D 80.893 560 61 22 1490 2021 371679371 371678830 1.270000e-107 399
16 TraesCS3D01G295700 chr1D 80.714 560 63 20 1490 2021 487146750 487146208 5.890000e-106 394
17 TraesCS3D01G295700 chr1D 94.845 97 5 0 1400 1496 478352503 478352599 3.920000e-33 152
18 TraesCS3D01G295700 chr6B 82.272 1303 226 5 3 1302 563088164 563086864 0.000000e+00 1122
19 TraesCS3D01G295700 chr7A 81.183 1031 176 10 275 1302 672039314 672040329 0.000000e+00 813
20 TraesCS3D01G295700 chr2D 80.576 556 64 19 1490 2018 47003788 47004326 2.740000e-104 388
21 TraesCS3D01G295700 chr2D 96.809 94 1 2 1399 1490 174430835 174430742 3.030000e-34 156
22 TraesCS3D01G295700 chr2A 78.819 576 111 10 6 575 550183935 550184505 5.930000e-101 377
23 TraesCS3D01G295700 chr5B 92.727 110 6 2 1382 1489 24673714 24673823 8.420000e-35 158
24 TraesCS3D01G295700 chr3B 97.826 92 1 1 1399 1489 118790354 118790445 8.420000e-35 158
25 TraesCS3D01G295700 chr5A 92.453 106 4 4 1384 1486 626964492 626964596 5.070000e-32 148
26 TraesCS3D01G295700 chr1B 93.939 99 5 1 1389 1486 554222417 554222515 5.070000e-32 148
27 TraesCS3D01G295700 chr1A 93.137 102 5 2 1397 1496 118503693 118503592 5.070000e-32 148


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G295700 chr3D 408330892 408333167 2275 False 4204 4204 100.000 1 2276 1 chr3D.!!$F2 2275
1 TraesCS3D01G295700 chr7B 660721426 660722728 1302 True 2028 2028 94.781 1 1302 1 chr7B.!!$R1 1301
2 TraesCS3D01G295700 chr7B 675349687 675350972 1285 True 1879 1879 92.934 2 1302 1 chr7B.!!$R2 1300
3 TraesCS3D01G295700 chr4B 582145748 582146731 983 True 1511 1511 94.411 321 1302 1 chr4B.!!$R2 981
4 TraesCS3D01G295700 chr4B 1119970 1120582 612 False 939 939 94.290 689 1301 1 chr4B.!!$F1 612
5 TraesCS3D01G295700 chr4B 639442636 639443173 537 True 398 398 80.866 1490 2017 1 chr4B.!!$R3 527
6 TraesCS3D01G295700 chr6A 565317795 565319099 1304 True 1358 1358 85.485 3 1307 1 chr6A.!!$R1 1304
7 TraesCS3D01G295700 chr6A 326745231 326745773 542 False 411 411 81.250 1490 2021 1 chr6A.!!$F1 531
8 TraesCS3D01G295700 chr3A 212134376 212135665 1289 True 1315 1315 85.126 3 1307 1 chr3A.!!$R1 1304
9 TraesCS3D01G295700 chr1D 53958523 53959826 1303 True 1306 1306 84.763 3 1306 1 chr1D.!!$R1 1303
10 TraesCS3D01G295700 chr1D 375358615 375359916 1301 False 726 726 76.853 1 1302 1 chr1D.!!$F1 1301
11 TraesCS3D01G295700 chr1D 371678830 371679371 541 True 399 399 80.893 1490 2021 1 chr1D.!!$R2 531
12 TraesCS3D01G295700 chr1D 487146208 487146750 542 True 394 394 80.714 1490 2021 1 chr1D.!!$R3 531
13 TraesCS3D01G295700 chr6B 563086864 563088164 1300 True 1122 1122 82.272 3 1302 1 chr6B.!!$R1 1299
14 TraesCS3D01G295700 chr7A 672039314 672040329 1015 False 813 813 81.183 275 1302 1 chr7A.!!$F1 1027
15 TraesCS3D01G295700 chr2D 47003788 47004326 538 False 388 388 80.576 1490 2018 1 chr2D.!!$F1 528
16 TraesCS3D01G295700 chr2A 550183935 550184505 570 False 377 377 78.819 6 575 1 chr2A.!!$F1 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
58 59 0.392595 GGGGTGCTACACTTGCTACC 60.393 60.0 0.0 0.0 34.4 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1892 1930 0.0293 GCTTGTCTCGCAAAACTGCA 59.971 50.0 0.0 0.0 36.53 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 0.392595 GGGGTGCTACACTTGCTACC 60.393 60.000 0.00 0.00 34.40 3.18
98 99 1.029408 CGGAAATTGGACATGGCGGA 61.029 55.000 0.00 0.00 0.00 5.54
146 147 2.422519 CCACCAGAAGCTGAAGCCATAT 60.423 50.000 0.00 0.00 43.38 1.78
245 248 0.600255 AAGTGTGTACCGTGCTCTGC 60.600 55.000 0.00 0.00 0.00 4.26
331 334 7.009179 AGAACAGATGTGGAAGAAACTATGA 57.991 36.000 0.00 0.00 0.00 2.15
347 351 4.144297 ACTATGAAAGCTCAAGGTTTGCA 58.856 39.130 11.59 9.62 44.63 4.08
414 419 1.881252 CGAATGTACCCTTCGGCGG 60.881 63.158 7.21 0.00 41.27 6.13
431 436 1.663643 GCGGCGTCATATCAAAGTCAA 59.336 47.619 9.37 0.00 0.00 3.18
534 541 4.072131 GGGAACAAGCACATGAGTTCTTA 58.928 43.478 0.00 0.00 40.05 2.10
853 861 3.240134 GAGTCGGACAAGGCTGGCA 62.240 63.158 11.27 0.00 28.70 4.92
930 938 3.858638 ACTTGGGGGTATCTGATCCTTTT 59.141 43.478 0.00 0.00 0.00 2.27
1020 1028 1.988293 TGGAAACCGATTGCTTGGAA 58.012 45.000 0.00 0.00 0.00 3.53
1054 1063 3.093814 TGGAAATCTCGCCAGTACAGTA 58.906 45.455 0.00 0.00 0.00 2.74
1161 1172 1.128200 CCAATGTCCCGACCCATCTA 58.872 55.000 0.00 0.00 0.00 1.98
1329 1340 9.959721 AAATAAAGCAAGAACAGTATCCTAGAA 57.040 29.630 0.00 0.00 0.00 2.10
1330 1341 9.959721 AATAAAGCAAGAACAGTATCCTAGAAA 57.040 29.630 0.00 0.00 0.00 2.52
1331 1342 9.959721 ATAAAGCAAGAACAGTATCCTAGAAAA 57.040 29.630 0.00 0.00 0.00 2.29
1332 1343 7.674471 AAGCAAGAACAGTATCCTAGAAAAC 57.326 36.000 0.00 0.00 0.00 2.43
1333 1344 6.769512 AGCAAGAACAGTATCCTAGAAAACA 58.230 36.000 0.00 0.00 0.00 2.83
1334 1345 6.876257 AGCAAGAACAGTATCCTAGAAAACAG 59.124 38.462 0.00 0.00 0.00 3.16
1335 1346 6.651225 GCAAGAACAGTATCCTAGAAAACAGT 59.349 38.462 0.00 0.00 0.00 3.55
1336 1347 7.360438 GCAAGAACAGTATCCTAGAAAACAGTG 60.360 40.741 0.00 0.00 0.00 3.66
1337 1348 6.702329 AGAACAGTATCCTAGAAAACAGTGG 58.298 40.000 0.00 0.00 0.00 4.00
1338 1349 4.833390 ACAGTATCCTAGAAAACAGTGGC 58.167 43.478 0.00 0.00 0.00 5.01
1339 1350 4.532521 ACAGTATCCTAGAAAACAGTGGCT 59.467 41.667 0.00 0.00 0.00 4.75
1340 1351 5.112686 CAGTATCCTAGAAAACAGTGGCTC 58.887 45.833 0.00 0.00 0.00 4.70
1341 1352 5.026790 AGTATCCTAGAAAACAGTGGCTCT 58.973 41.667 0.00 0.00 0.00 4.09
1342 1353 6.096987 CAGTATCCTAGAAAACAGTGGCTCTA 59.903 42.308 0.00 0.00 0.00 2.43
1343 1354 6.841755 AGTATCCTAGAAAACAGTGGCTCTAT 59.158 38.462 0.00 0.00 0.00 1.98
1344 1355 5.599999 TCCTAGAAAACAGTGGCTCTATC 57.400 43.478 0.00 0.00 0.00 2.08
1345 1356 4.406003 TCCTAGAAAACAGTGGCTCTATCC 59.594 45.833 0.00 0.00 0.00 2.59
1346 1357 4.407296 CCTAGAAAACAGTGGCTCTATCCT 59.593 45.833 0.00 0.00 0.00 3.24
1347 1358 5.598830 CCTAGAAAACAGTGGCTCTATCCTA 59.401 44.000 0.00 0.00 0.00 2.94
1348 1359 5.606348 AGAAAACAGTGGCTCTATCCTAG 57.394 43.478 0.00 0.00 0.00 3.02
1349 1360 4.407296 AGAAAACAGTGGCTCTATCCTAGG 59.593 45.833 0.82 0.82 0.00 3.02
1350 1361 2.390225 ACAGTGGCTCTATCCTAGGG 57.610 55.000 9.46 0.00 0.00 3.53
1351 1362 1.133009 ACAGTGGCTCTATCCTAGGGG 60.133 57.143 9.46 0.00 0.00 4.79
1352 1363 1.133009 CAGTGGCTCTATCCTAGGGGT 60.133 57.143 9.46 0.48 0.00 4.95
1353 1364 1.133009 AGTGGCTCTATCCTAGGGGTG 60.133 57.143 9.46 0.00 0.00 4.61
1354 1365 0.941963 TGGCTCTATCCTAGGGGTGT 59.058 55.000 9.46 0.00 0.00 4.16
1355 1366 1.133136 TGGCTCTATCCTAGGGGTGTC 60.133 57.143 9.46 3.32 0.00 3.67
1356 1367 1.133136 GGCTCTATCCTAGGGGTGTCA 60.133 57.143 9.46 0.00 0.00 3.58
1357 1368 2.679082 GCTCTATCCTAGGGGTGTCAA 58.321 52.381 9.46 0.00 0.00 3.18
1358 1369 3.039011 GCTCTATCCTAGGGGTGTCAAA 58.961 50.000 9.46 0.00 0.00 2.69
1359 1370 3.648545 GCTCTATCCTAGGGGTGTCAAAT 59.351 47.826 9.46 0.00 0.00 2.32
1360 1371 4.103311 GCTCTATCCTAGGGGTGTCAAATT 59.897 45.833 9.46 0.00 0.00 1.82
1361 1372 5.743422 GCTCTATCCTAGGGGTGTCAAATTC 60.743 48.000 9.46 0.00 0.00 2.17
1362 1373 3.953542 ATCCTAGGGGTGTCAAATTCC 57.046 47.619 9.46 0.00 0.00 3.01
1363 1374 1.920351 TCCTAGGGGTGTCAAATTCCC 59.080 52.381 9.46 0.00 40.41 3.97
1366 1377 2.276869 GGGGTGTCAAATTCCCTGC 58.723 57.895 0.00 0.00 40.88 4.85
1367 1378 0.251787 GGGGTGTCAAATTCCCTGCT 60.252 55.000 0.00 0.00 40.88 4.24
1368 1379 1.005450 GGGGTGTCAAATTCCCTGCTA 59.995 52.381 0.00 0.00 40.88 3.49
1369 1380 2.556559 GGGGTGTCAAATTCCCTGCTAA 60.557 50.000 0.00 0.00 40.88 3.09
1370 1381 2.492088 GGGTGTCAAATTCCCTGCTAAC 59.508 50.000 0.00 0.00 38.29 2.34
1371 1382 3.153919 GGTGTCAAATTCCCTGCTAACA 58.846 45.455 0.00 0.00 0.00 2.41
1372 1383 3.191371 GGTGTCAAATTCCCTGCTAACAG 59.809 47.826 0.00 0.00 44.05 3.16
1373 1384 3.821033 GTGTCAAATTCCCTGCTAACAGT 59.179 43.478 0.00 0.00 42.81 3.55
1374 1385 3.820467 TGTCAAATTCCCTGCTAACAGTG 59.180 43.478 0.00 0.00 42.81 3.66
1375 1386 3.191371 GTCAAATTCCCTGCTAACAGTGG 59.809 47.826 0.00 0.00 42.81 4.00
1376 1387 3.073798 TCAAATTCCCTGCTAACAGTGGA 59.926 43.478 0.00 0.70 42.81 4.02
1379 1390 3.806949 TTCCCTGCTAACAGTGGAATT 57.193 42.857 10.35 0.00 42.98 2.17
1380 1391 3.806949 TCCCTGCTAACAGTGGAATTT 57.193 42.857 0.00 0.00 42.81 1.82
1381 1392 3.686016 TCCCTGCTAACAGTGGAATTTC 58.314 45.455 0.00 0.00 42.81 2.17
1382 1393 3.330701 TCCCTGCTAACAGTGGAATTTCT 59.669 43.478 0.00 0.00 42.81 2.52
1383 1394 4.534500 TCCCTGCTAACAGTGGAATTTCTA 59.466 41.667 0.00 0.00 42.81 2.10
1384 1395 5.191722 TCCCTGCTAACAGTGGAATTTCTAT 59.808 40.000 0.00 0.00 42.81 1.98
1385 1396 6.385759 TCCCTGCTAACAGTGGAATTTCTATA 59.614 38.462 0.00 0.00 42.81 1.31
1386 1397 7.072454 TCCCTGCTAACAGTGGAATTTCTATAT 59.928 37.037 0.00 0.00 42.81 0.86
1387 1398 8.375506 CCCTGCTAACAGTGGAATTTCTATATA 58.624 37.037 0.00 0.00 42.81 0.86
1388 1399 9.950496 CCTGCTAACAGTGGAATTTCTATATAT 57.050 33.333 0.00 0.00 42.81 0.86
1411 1422 4.473477 AAAGAAAGATACACTCCCTCCG 57.527 45.455 0.00 0.00 0.00 4.63
1412 1423 3.103080 AGAAAGATACACTCCCTCCGT 57.897 47.619 0.00 0.00 0.00 4.69
1413 1424 3.442076 AGAAAGATACACTCCCTCCGTT 58.558 45.455 0.00 0.00 0.00 4.44
1414 1425 3.447944 AGAAAGATACACTCCCTCCGTTC 59.552 47.826 0.00 0.00 0.00 3.95
1415 1426 1.777941 AGATACACTCCCTCCGTTCC 58.222 55.000 0.00 0.00 0.00 3.62
1416 1427 1.006758 AGATACACTCCCTCCGTTCCA 59.993 52.381 0.00 0.00 0.00 3.53
1417 1428 1.829222 GATACACTCCCTCCGTTCCAA 59.171 52.381 0.00 0.00 0.00 3.53
1418 1429 1.719529 TACACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
1419 1430 0.841289 ACACTCCCTCCGTTCCAAAA 59.159 50.000 0.00 0.00 0.00 2.44
1420 1431 1.423921 ACACTCCCTCCGTTCCAAAAT 59.576 47.619 0.00 0.00 0.00 1.82
1421 1432 2.640826 ACACTCCCTCCGTTCCAAAATA 59.359 45.455 0.00 0.00 0.00 1.40
1422 1433 3.270877 CACTCCCTCCGTTCCAAAATAG 58.729 50.000 0.00 0.00 0.00 1.73
1423 1434 3.055385 CACTCCCTCCGTTCCAAAATAGA 60.055 47.826 0.00 0.00 0.00 1.98
1424 1435 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1425 1436 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1426 1437 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1427 1438 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1428 1439 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
1429 1440 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
1430 1441 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
1431 1442 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
1432 1443 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
1433 1444 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
1434 1445 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
1435 1446 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
1436 1447 7.094549 CGTTCCAAAATAGATGACCCAACTTTA 60.095 37.037 0.00 0.00 0.00 1.85
1437 1448 8.749354 GTTCCAAAATAGATGACCCAACTTTAT 58.251 33.333 0.00 0.00 0.00 1.40
1438 1449 9.983024 TTCCAAAATAGATGACCCAACTTTATA 57.017 29.630 0.00 0.00 0.00 0.98
1439 1450 9.403583 TCCAAAATAGATGACCCAACTTTATAC 57.596 33.333 0.00 0.00 0.00 1.47
1440 1451 9.408648 CCAAAATAGATGACCCAACTTTATACT 57.591 33.333 0.00 0.00 0.00 2.12
1462 1473 7.128234 ACTAAGTTAGTACAAAGTTGGGTCA 57.872 36.000 14.00 0.00 37.23 4.02
1463 1474 7.742767 ACTAAGTTAGTACAAAGTTGGGTCAT 58.257 34.615 14.00 0.00 37.23 3.06
1464 1475 7.876582 ACTAAGTTAGTACAAAGTTGGGTCATC 59.123 37.037 14.00 0.00 37.23 2.92
1465 1476 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
1466 1477 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
1467 1478 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
1468 1479 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
1469 1480 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
1470 1481 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
1471 1482 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
1472 1483 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
1473 1484 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
1474 1485 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
1475 1486 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
1476 1487 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
1477 1488 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
1478 1489 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
1479 1490 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
1480 1491 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
1481 1492 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1482 1493 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
1483 1494 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
1484 1495 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
1485 1496 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
1486 1497 3.629142 ATTTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
1487 1498 2.019807 TTTGGAACGGAGGGAGTAGT 57.980 50.000 0.00 0.00 0.00 2.73
1488 1499 2.019807 TTGGAACGGAGGGAGTAGTT 57.980 50.000 0.00 0.00 0.00 2.24
1517 1528 5.163478 ACCATACCGTATGTCTTTACTGTCC 60.163 44.000 15.79 0.00 34.36 4.02
1518 1529 5.163488 CCATACCGTATGTCTTTACTGTCCA 60.163 44.000 15.79 0.00 34.36 4.02
1521 1532 4.042398 CCGTATGTCTTTACTGTCCATCG 58.958 47.826 0.00 0.00 0.00 3.84
1523 1534 5.100259 CGTATGTCTTTACTGTCCATCGTT 58.900 41.667 0.00 0.00 0.00 3.85
1532 1543 6.961359 TTACTGTCCATCGTTTTCATGTAG 57.039 37.500 0.00 0.00 0.00 2.74
1537 1548 4.876107 GTCCATCGTTTTCATGTAGTGGAT 59.124 41.667 0.00 0.00 36.93 3.41
1544 1555 5.872617 CGTTTTCATGTAGTGGATGGAACTA 59.127 40.000 0.00 0.00 0.00 2.24
1590 1601 3.871463 GCACCCTCACATTCAGAGTCATT 60.871 47.826 0.00 0.00 0.00 2.57
1598 1609 5.934043 TCACATTCAGAGTCATTACCAACAG 59.066 40.000 0.00 0.00 0.00 3.16
1602 1613 7.120285 ACATTCAGAGTCATTACCAACAGAATG 59.880 37.037 0.00 0.00 42.38 2.67
1612 1624 4.785346 ACCAACAGAATGATATCCTGCT 57.215 40.909 0.00 0.00 39.69 4.24
1613 1625 5.894298 ACCAACAGAATGATATCCTGCTA 57.106 39.130 0.00 0.00 39.69 3.49
1625 1637 6.533730 TGATATCCTGCTAAAACATCGGAAT 58.466 36.000 0.00 0.00 0.00 3.01
1651 1663 2.558359 ACTGCCAGCATGTAAAGAAACC 59.442 45.455 0.00 0.00 0.00 3.27
1657 1669 5.404946 CCAGCATGTAAAGAAACCTTGATG 58.595 41.667 0.00 0.00 0.00 3.07
1673 1685 4.794762 CCTTGATGTATTGATGCAAACACG 59.205 41.667 0.00 0.00 0.00 4.49
1698 1710 4.081420 ACTGGTGCTCTTGGAAGTACATAG 60.081 45.833 0.00 0.00 33.98 2.23
1703 1715 6.284459 GTGCTCTTGGAAGTACATAGCTATT 58.716 40.000 2.64 0.00 33.40 1.73
1706 1718 6.203723 GCTCTTGGAAGTACATAGCTATTTGG 59.796 42.308 2.64 0.00 31.03 3.28
1715 1727 6.708054 AGTACATAGCTATTTGGATGTCTTGC 59.292 38.462 2.64 0.00 34.46 4.01
1717 1729 5.887598 ACATAGCTATTTGGATGTCTTGCAA 59.112 36.000 2.64 0.00 33.34 4.08
1733 1745 3.564235 TGCAAATCTCACATTCTGCAC 57.436 42.857 0.00 0.00 35.02 4.57
1743 1755 0.454600 CATTCTGCACACCCAGCATC 59.545 55.000 0.00 0.00 41.82 3.91
1744 1756 0.330604 ATTCTGCACACCCAGCATCT 59.669 50.000 0.00 0.00 41.82 2.90
1749 1761 1.065926 TGCACACCCAGCATCTAGAAG 60.066 52.381 0.00 0.00 37.02 2.85
1762 1774 6.965500 CAGCATCTAGAAGCACAACAATAAAG 59.035 38.462 21.11 0.00 0.00 1.85
1765 1777 6.241207 TCTAGAAGCACAACAATAAAGCAC 57.759 37.500 0.00 0.00 0.00 4.40
1769 1781 4.141855 AGCACAACAATAAAGCACGTAC 57.858 40.909 0.00 0.00 0.00 3.67
1770 1782 2.900046 GCACAACAATAAAGCACGTACG 59.100 45.455 15.01 15.01 0.00 3.67
1772 1784 4.382831 CACAACAATAAAGCACGTACGAG 58.617 43.478 24.41 16.14 0.00 4.18
1790 1802 2.614057 CGAGCTTCATGGAACCATTACC 59.386 50.000 3.35 0.00 33.90 2.85
1792 1804 4.442893 CGAGCTTCATGGAACCATTACCTA 60.443 45.833 3.35 0.00 33.90 3.08
1797 1809 6.575244 TTCATGGAACCATTACCTATCAGT 57.425 37.500 3.35 0.00 33.90 3.41
1838 1876 9.372369 AGATAGTTACAACAAGATTTCTAGTGC 57.628 33.333 0.00 0.00 0.00 4.40
1839 1877 9.151471 GATAGTTACAACAAGATTTCTAGTGCA 57.849 33.333 0.00 0.00 0.00 4.57
1840 1878 7.190920 AGTTACAACAAGATTTCTAGTGCAC 57.809 36.000 9.40 9.40 0.00 4.57
1847 1885 6.398918 ACAAGATTTCTAGTGCACGATAAGT 58.601 36.000 12.01 1.77 0.00 2.24
1849 1887 7.387948 ACAAGATTTCTAGTGCACGATAAGTTT 59.612 33.333 12.01 0.00 0.00 2.66
1852 1890 8.230486 AGATTTCTAGTGCACGATAAGTTTTTG 58.770 33.333 12.01 0.00 0.00 2.44
1875 1913 3.467374 TCCAAGATTTTGCCAAACACC 57.533 42.857 0.00 0.00 32.79 4.16
1879 1917 1.693606 AGATTTTGCCAAACACCCTGG 59.306 47.619 0.00 0.00 36.99 4.45
1880 1918 1.416030 GATTTTGCCAAACACCCTGGT 59.584 47.619 0.00 0.00 36.24 4.00
1881 1919 2.160721 TTTTGCCAAACACCCTGGTA 57.839 45.000 0.00 0.00 36.24 3.25
1889 1927 3.958147 CCAAACACCCTGGTAGAAAAACT 59.042 43.478 0.00 0.00 0.00 2.66
1890 1928 4.404394 CCAAACACCCTGGTAGAAAAACTT 59.596 41.667 0.00 0.00 0.00 2.66
1891 1929 5.105106 CCAAACACCCTGGTAGAAAAACTTT 60.105 40.000 0.00 0.00 0.00 2.66
1892 1930 6.403049 CAAACACCCTGGTAGAAAAACTTTT 58.597 36.000 0.00 0.00 0.00 2.27
1893 1931 5.592104 ACACCCTGGTAGAAAAACTTTTG 57.408 39.130 0.00 0.00 0.00 2.44
1894 1932 4.142026 ACACCCTGGTAGAAAAACTTTTGC 60.142 41.667 0.00 0.00 0.00 3.68
1895 1933 4.027437 ACCCTGGTAGAAAAACTTTTGCA 58.973 39.130 0.00 0.00 0.00 4.08
1896 1934 4.099419 ACCCTGGTAGAAAAACTTTTGCAG 59.901 41.667 0.00 0.00 0.00 4.41
1897 1935 4.099419 CCCTGGTAGAAAAACTTTTGCAGT 59.901 41.667 0.00 0.00 37.30 4.40
1938 1976 8.065473 TGAAATTTCTAGCAATGATAAGCCAA 57.935 30.769 18.64 0.00 0.00 4.52
1939 1977 8.698210 TGAAATTTCTAGCAATGATAAGCCAAT 58.302 29.630 18.64 0.00 0.00 3.16
1968 2006 6.940867 ACTCCCAGGTTTTATCTAAACAGTTC 59.059 38.462 0.00 0.00 46.44 3.01
1972 2010 4.698780 AGGTTTTATCTAAACAGTTCCGCC 59.301 41.667 0.00 0.00 46.44 6.13
1988 2026 1.608822 CGCCAACCGAAAATTTACCG 58.391 50.000 0.00 0.00 40.02 4.02
2011 2049 5.611844 CGACTGAAAATTGGTACTTCGTGTC 60.612 44.000 0.00 1.28 0.00 3.67
2014 2052 4.809958 TGAAAATTGGTACTTCGTGTCGAA 59.190 37.500 4.60 4.60 43.75 3.71
2027 2065 2.234300 TGTCGAACACAGGAAGTTCC 57.766 50.000 14.54 14.54 41.72 3.62
2028 2066 1.483004 TGTCGAACACAGGAAGTTCCA 59.517 47.619 23.87 0.00 41.72 3.53
2029 2067 2.135933 GTCGAACACAGGAAGTTCCAG 58.864 52.381 23.87 18.19 41.72 3.86
2030 2068 0.868406 CGAACACAGGAAGTTCCAGC 59.132 55.000 23.87 2.42 41.72 4.85
2031 2069 0.868406 GAACACAGGAAGTTCCAGCG 59.132 55.000 23.87 12.45 39.61 5.18
2032 2070 0.468226 AACACAGGAAGTTCCAGCGA 59.532 50.000 23.87 0.00 39.61 4.93
2033 2071 0.468226 ACACAGGAAGTTCCAGCGAA 59.532 50.000 23.87 0.00 39.61 4.70
2034 2072 1.151668 CACAGGAAGTTCCAGCGAAG 58.848 55.000 23.87 8.47 39.61 3.79
2035 2073 0.603975 ACAGGAAGTTCCAGCGAAGC 60.604 55.000 23.87 0.00 45.60 3.86
2036 2074 1.003233 AGGAAGTTCCAGCGAAGCC 60.003 57.895 23.87 0.00 46.22 4.35
2037 2075 2.788191 AGGAAGTTCCAGCGAAGCCG 62.788 60.000 23.87 0.00 46.22 5.52
2047 2085 2.098298 CGAAGCCGGCAATGTTCG 59.902 61.111 31.54 28.93 36.22 3.95
2048 2086 2.387445 CGAAGCCGGCAATGTTCGA 61.387 57.895 32.89 0.00 43.50 3.71
2049 2087 1.425428 GAAGCCGGCAATGTTCGAG 59.575 57.895 31.54 0.00 0.00 4.04
2050 2088 1.298859 GAAGCCGGCAATGTTCGAGT 61.299 55.000 31.54 0.00 0.00 4.18
2051 2089 1.577328 AAGCCGGCAATGTTCGAGTG 61.577 55.000 31.54 0.00 0.00 3.51
2052 2090 2.032634 GCCGGCAATGTTCGAGTGA 61.033 57.895 24.80 0.00 0.00 3.41
2053 2091 1.573829 GCCGGCAATGTTCGAGTGAA 61.574 55.000 24.80 0.00 0.00 3.18
2054 2092 0.443869 CCGGCAATGTTCGAGTGAAG 59.556 55.000 0.00 0.00 33.98 3.02
2055 2093 1.148310 CGGCAATGTTCGAGTGAAGT 58.852 50.000 0.00 0.00 33.98 3.01
2056 2094 1.531149 CGGCAATGTTCGAGTGAAGTT 59.469 47.619 0.00 0.00 33.98 2.66
2057 2095 2.662791 CGGCAATGTTCGAGTGAAGTTG 60.663 50.000 0.00 0.00 35.53 3.16
2058 2096 2.350772 GGCAATGTTCGAGTGAAGTTGG 60.351 50.000 0.00 0.00 34.16 3.77
2059 2097 2.918131 GCAATGTTCGAGTGAAGTTGGC 60.918 50.000 0.00 0.00 34.16 4.52
2060 2098 1.148310 ATGTTCGAGTGAAGTTGGCG 58.852 50.000 0.00 0.00 33.98 5.69
2061 2099 0.878523 TGTTCGAGTGAAGTTGGCGG 60.879 55.000 0.00 0.00 33.98 6.13
2062 2100 0.599204 GTTCGAGTGAAGTTGGCGGA 60.599 55.000 0.00 0.00 33.98 5.54
2063 2101 0.319555 TTCGAGTGAAGTTGGCGGAG 60.320 55.000 0.00 0.00 0.00 4.63
2076 2114 2.202932 CGGAGCCGGTGAGATTGG 60.203 66.667 1.90 0.00 35.56 3.16
2077 2115 2.721167 CGGAGCCGGTGAGATTGGA 61.721 63.158 1.90 0.00 35.56 3.53
2078 2116 1.144936 GGAGCCGGTGAGATTGGAG 59.855 63.158 1.90 0.00 0.00 3.86
2079 2117 1.144936 GAGCCGGTGAGATTGGAGG 59.855 63.158 1.90 0.00 0.00 4.30
2080 2118 2.514824 GCCGGTGAGATTGGAGGC 60.515 66.667 1.90 0.00 37.61 4.70
2081 2119 3.036429 GCCGGTGAGATTGGAGGCT 62.036 63.158 1.90 0.00 41.21 4.58
2082 2120 1.604378 CCGGTGAGATTGGAGGCTT 59.396 57.895 0.00 0.00 0.00 4.35
2083 2121 0.462759 CCGGTGAGATTGGAGGCTTC 60.463 60.000 0.00 0.00 0.00 3.86
2084 2122 0.539051 CGGTGAGATTGGAGGCTTCT 59.461 55.000 0.00 0.00 0.00 2.85
2085 2123 1.741732 CGGTGAGATTGGAGGCTTCTG 60.742 57.143 0.00 0.00 0.00 3.02
2086 2124 1.407989 GGTGAGATTGGAGGCTTCTGG 60.408 57.143 0.00 0.00 0.00 3.86
2087 2125 0.254178 TGAGATTGGAGGCTTCTGGC 59.746 55.000 0.00 0.00 40.90 4.85
2088 2126 0.254178 GAGATTGGAGGCTTCTGGCA 59.746 55.000 0.00 0.00 44.01 4.92
2089 2127 0.924823 AGATTGGAGGCTTCTGGCAT 59.075 50.000 0.00 0.00 44.01 4.40
2090 2128 1.030457 GATTGGAGGCTTCTGGCATG 58.970 55.000 0.00 0.00 44.01 4.06
2091 2129 0.396695 ATTGGAGGCTTCTGGCATGG 60.397 55.000 0.00 0.00 44.01 3.66
2092 2130 2.832201 GGAGGCTTCTGGCATGGC 60.832 66.667 13.29 13.29 44.01 4.40
2093 2131 2.044650 GAGGCTTCTGGCATGGCA 60.045 61.111 21.97 21.97 44.01 4.92
2094 2132 1.679977 GAGGCTTCTGGCATGGCAA 60.680 57.895 23.47 8.49 44.01 4.52
2095 2133 1.001248 AGGCTTCTGGCATGGCAAT 59.999 52.632 23.47 2.45 44.01 3.56
2096 2134 0.616679 AGGCTTCTGGCATGGCAATT 60.617 50.000 23.47 2.52 44.01 2.32
2097 2135 0.251073 GGCTTCTGGCATGGCAATTT 59.749 50.000 23.47 0.00 44.01 1.82
2098 2136 1.339342 GGCTTCTGGCATGGCAATTTT 60.339 47.619 23.47 0.00 44.01 1.82
2099 2137 1.735571 GCTTCTGGCATGGCAATTTTG 59.264 47.619 23.47 11.12 41.35 2.44
2100 2138 2.613474 GCTTCTGGCATGGCAATTTTGA 60.613 45.455 23.47 13.38 41.35 2.69
2101 2139 3.259064 CTTCTGGCATGGCAATTTTGAG 58.741 45.455 23.47 9.64 0.00 3.02
2102 2140 1.066716 TCTGGCATGGCAATTTTGAGC 60.067 47.619 23.47 0.00 0.00 4.26
2103 2141 0.685660 TGGCATGGCAATTTTGAGCA 59.314 45.000 21.13 0.00 0.00 4.26
2104 2142 1.081094 GGCATGGCAATTTTGAGCAC 58.919 50.000 15.47 0.00 0.00 4.40
2105 2143 0.717224 GCATGGCAATTTTGAGCACG 59.283 50.000 0.00 0.00 0.00 5.34
2106 2144 1.936203 GCATGGCAATTTTGAGCACGT 60.936 47.619 0.00 0.00 0.00 4.49
2107 2145 1.722464 CATGGCAATTTTGAGCACGTG 59.278 47.619 12.28 12.28 0.00 4.49
2108 2146 1.028130 TGGCAATTTTGAGCACGTGA 58.972 45.000 22.23 0.00 0.00 4.35
2109 2147 1.001487 TGGCAATTTTGAGCACGTGAG 60.001 47.619 22.23 0.00 0.00 3.51
2110 2148 1.055338 GCAATTTTGAGCACGTGAGC 58.945 50.000 22.23 10.56 0.00 4.26
2112 2150 2.859806 GCAATTTTGAGCACGTGAGCTT 60.860 45.455 22.23 0.20 46.75 3.74
2113 2151 2.693797 ATTTTGAGCACGTGAGCTTG 57.306 45.000 22.23 0.00 46.75 4.01
2114 2152 0.029300 TTTTGAGCACGTGAGCTTGC 59.971 50.000 22.23 1.74 46.75 4.01
2115 2153 1.094650 TTTGAGCACGTGAGCTTGCA 61.095 50.000 22.23 2.28 46.75 4.08
2116 2154 1.775039 TTGAGCACGTGAGCTTGCAC 61.775 55.000 22.23 4.89 46.75 4.57
2117 2155 1.958205 GAGCACGTGAGCTTGCACT 60.958 57.895 22.23 3.40 46.75 4.40
2118 2156 2.167808 GAGCACGTGAGCTTGCACTG 62.168 60.000 22.23 5.95 46.75 3.66
2119 2157 2.246739 GCACGTGAGCTTGCACTGA 61.247 57.895 22.23 0.00 39.36 3.41
2120 2158 1.775039 GCACGTGAGCTTGCACTGAA 61.775 55.000 22.23 0.00 39.36 3.02
2121 2159 0.870393 CACGTGAGCTTGCACTGAAT 59.130 50.000 10.90 0.00 36.65 2.57
2122 2160 1.136141 CACGTGAGCTTGCACTGAATC 60.136 52.381 10.90 0.00 36.65 2.52
2123 2161 1.270518 ACGTGAGCTTGCACTGAATCT 60.271 47.619 4.26 0.00 36.65 2.40
2124 2162 2.029020 ACGTGAGCTTGCACTGAATCTA 60.029 45.455 4.26 0.00 36.65 1.98
2125 2163 2.602211 CGTGAGCTTGCACTGAATCTAG 59.398 50.000 4.26 0.00 36.65 2.43
2126 2164 2.935201 GTGAGCTTGCACTGAATCTAGG 59.065 50.000 0.00 0.00 35.91 3.02
2127 2165 2.568956 TGAGCTTGCACTGAATCTAGGT 59.431 45.455 0.00 0.00 0.00 3.08
2128 2166 3.008375 TGAGCTTGCACTGAATCTAGGTT 59.992 43.478 0.00 0.00 0.00 3.50
2129 2167 4.006319 GAGCTTGCACTGAATCTAGGTTT 58.994 43.478 0.00 0.00 0.00 3.27
2130 2168 4.401925 AGCTTGCACTGAATCTAGGTTTT 58.598 39.130 0.00 0.00 0.00 2.43
2131 2169 4.217118 AGCTTGCACTGAATCTAGGTTTTG 59.783 41.667 0.00 0.00 0.00 2.44
2132 2170 4.616835 GCTTGCACTGAATCTAGGTTTTGG 60.617 45.833 0.00 0.00 0.00 3.28
2133 2171 4.098914 TGCACTGAATCTAGGTTTTGGT 57.901 40.909 0.00 0.00 0.00 3.67
2134 2172 5.235850 TGCACTGAATCTAGGTTTTGGTA 57.764 39.130 0.00 0.00 0.00 3.25
2135 2173 5.245531 TGCACTGAATCTAGGTTTTGGTAG 58.754 41.667 0.00 0.00 0.00 3.18
2136 2174 5.012664 TGCACTGAATCTAGGTTTTGGTAGA 59.987 40.000 0.00 0.00 0.00 2.59
2137 2175 5.582665 GCACTGAATCTAGGTTTTGGTAGAG 59.417 44.000 0.00 0.00 0.00 2.43
2138 2176 6.574465 GCACTGAATCTAGGTTTTGGTAGAGA 60.574 42.308 0.00 0.00 0.00 3.10
2139 2177 7.386851 CACTGAATCTAGGTTTTGGTAGAGAA 58.613 38.462 0.00 0.00 0.00 2.87
2140 2178 7.878127 CACTGAATCTAGGTTTTGGTAGAGAAA 59.122 37.037 0.00 0.00 0.00 2.52
2141 2179 7.878644 ACTGAATCTAGGTTTTGGTAGAGAAAC 59.121 37.037 0.00 0.00 35.54 2.78
2142 2180 7.974504 TGAATCTAGGTTTTGGTAGAGAAACT 58.025 34.615 0.00 0.00 36.32 2.66
2143 2181 8.095169 TGAATCTAGGTTTTGGTAGAGAAACTC 58.905 37.037 0.00 0.00 36.32 3.01
2144 2182 6.989155 TCTAGGTTTTGGTAGAGAAACTCA 57.011 37.500 0.00 0.00 36.32 3.41
2145 2183 7.369551 TCTAGGTTTTGGTAGAGAAACTCAA 57.630 36.000 0.00 0.00 36.32 3.02
2146 2184 7.215085 TCTAGGTTTTGGTAGAGAAACTCAAC 58.785 38.462 0.00 0.00 36.32 3.18
2147 2185 5.751586 AGGTTTTGGTAGAGAAACTCAACA 58.248 37.500 0.00 0.00 36.32 3.33
2148 2186 6.365520 AGGTTTTGGTAGAGAAACTCAACAT 58.634 36.000 0.00 0.00 36.32 2.71
2149 2187 6.486993 AGGTTTTGGTAGAGAAACTCAACATC 59.513 38.462 0.00 0.00 36.32 3.06
2150 2188 6.486993 GGTTTTGGTAGAGAAACTCAACATCT 59.513 38.462 0.00 0.00 36.32 2.90
2151 2189 7.013369 GGTTTTGGTAGAGAAACTCAACATCTT 59.987 37.037 0.00 0.00 36.32 2.40
2152 2190 8.406297 GTTTTGGTAGAGAAACTCAACATCTTT 58.594 33.333 0.00 0.00 33.95 2.52
2153 2191 8.519799 TTTGGTAGAGAAACTCAACATCTTTT 57.480 30.769 0.00 0.00 32.06 2.27
2154 2192 8.519799 TTGGTAGAGAAACTCAACATCTTTTT 57.480 30.769 0.00 0.00 32.06 1.94
2155 2193 9.621629 TTGGTAGAGAAACTCAACATCTTTTTA 57.378 29.630 0.00 0.00 32.06 1.52
2156 2194 9.793259 TGGTAGAGAAACTCAACATCTTTTTAT 57.207 29.630 0.00 0.00 32.06 1.40
2159 2197 7.597386 AGAGAAACTCAACATCTTTTTATGGC 58.403 34.615 0.00 0.00 32.06 4.40
2160 2198 7.231317 AGAGAAACTCAACATCTTTTTATGGCA 59.769 33.333 0.00 0.00 32.06 4.92
2161 2199 7.725251 AGAAACTCAACATCTTTTTATGGCAA 58.275 30.769 0.00 0.00 0.00 4.52
2162 2200 8.203485 AGAAACTCAACATCTTTTTATGGCAAA 58.797 29.630 0.00 0.00 0.00 3.68
2163 2201 7.713764 AACTCAACATCTTTTTATGGCAAAC 57.286 32.000 0.00 0.00 0.00 2.93
2164 2202 5.920273 ACTCAACATCTTTTTATGGCAAACG 59.080 36.000 0.00 0.00 0.00 3.60
2165 2203 6.078202 TCAACATCTTTTTATGGCAAACGA 57.922 33.333 0.00 0.00 0.00 3.85
2166 2204 6.148948 TCAACATCTTTTTATGGCAAACGAG 58.851 36.000 0.00 0.00 0.00 4.18
2167 2205 5.059404 ACATCTTTTTATGGCAAACGAGG 57.941 39.130 0.00 0.00 0.00 4.63
2168 2206 4.764823 ACATCTTTTTATGGCAAACGAGGA 59.235 37.500 0.00 0.00 0.00 3.71
2169 2207 4.759516 TCTTTTTATGGCAAACGAGGAC 57.240 40.909 0.00 0.00 0.00 3.85
2170 2208 4.138290 TCTTTTTATGGCAAACGAGGACA 58.862 39.130 0.00 0.00 0.00 4.02
2171 2209 4.215399 TCTTTTTATGGCAAACGAGGACAG 59.785 41.667 0.00 0.00 0.00 3.51
2172 2210 2.851263 TTATGGCAAACGAGGACAGT 57.149 45.000 0.00 0.00 0.00 3.55
2173 2211 2.851263 TATGGCAAACGAGGACAGTT 57.149 45.000 0.00 0.00 0.00 3.16
2174 2212 1.523758 ATGGCAAACGAGGACAGTTC 58.476 50.000 0.00 0.00 0.00 3.01
2175 2213 0.179234 TGGCAAACGAGGACAGTTCA 59.821 50.000 0.00 0.00 0.00 3.18
2176 2214 1.305201 GGCAAACGAGGACAGTTCAA 58.695 50.000 0.00 0.00 0.00 2.69
2177 2215 1.264288 GGCAAACGAGGACAGTTCAAG 59.736 52.381 0.00 0.00 0.00 3.02
2178 2216 1.334149 GCAAACGAGGACAGTTCAAGC 60.334 52.381 0.00 0.00 0.00 4.01
2179 2217 1.939934 CAAACGAGGACAGTTCAAGCA 59.060 47.619 0.00 0.00 0.00 3.91
2180 2218 2.325583 AACGAGGACAGTTCAAGCAA 57.674 45.000 0.00 0.00 0.00 3.91
2181 2219 2.325583 ACGAGGACAGTTCAAGCAAA 57.674 45.000 0.00 0.00 0.00 3.68
2182 2220 2.213499 ACGAGGACAGTTCAAGCAAAG 58.787 47.619 0.00 0.00 0.00 2.77
2183 2221 2.213499 CGAGGACAGTTCAAGCAAAGT 58.787 47.619 0.00 0.00 0.00 2.66
2184 2222 2.614057 CGAGGACAGTTCAAGCAAAGTT 59.386 45.455 0.00 0.00 0.00 2.66
2185 2223 3.065371 CGAGGACAGTTCAAGCAAAGTTT 59.935 43.478 0.00 0.00 0.00 2.66
2186 2224 4.354587 GAGGACAGTTCAAGCAAAGTTTG 58.645 43.478 11.41 11.41 0.00 2.93
2187 2225 3.763897 AGGACAGTTCAAGCAAAGTTTGT 59.236 39.130 16.70 1.59 0.00 2.83
2188 2226 3.859386 GGACAGTTCAAGCAAAGTTTGTG 59.141 43.478 16.70 8.45 0.00 3.33
2189 2227 4.485163 GACAGTTCAAGCAAAGTTTGTGT 58.515 39.130 16.70 10.80 0.00 3.72
2190 2228 4.485163 ACAGTTCAAGCAAAGTTTGTGTC 58.515 39.130 16.70 0.81 0.00 3.67
2191 2229 4.022416 ACAGTTCAAGCAAAGTTTGTGTCA 60.022 37.500 16.70 0.00 0.00 3.58
2192 2230 4.560035 CAGTTCAAGCAAAGTTTGTGTCAG 59.440 41.667 16.70 3.93 0.00 3.51
2193 2231 3.149436 TCAAGCAAAGTTTGTGTCAGC 57.851 42.857 16.70 1.52 0.00 4.26
2194 2232 2.159254 TCAAGCAAAGTTTGTGTCAGCC 60.159 45.455 16.70 0.00 0.00 4.85
2195 2233 1.473258 AGCAAAGTTTGTGTCAGCCA 58.527 45.000 16.70 0.00 0.00 4.75
2196 2234 2.034124 AGCAAAGTTTGTGTCAGCCAT 58.966 42.857 16.70 0.00 0.00 4.40
2197 2235 2.035066 AGCAAAGTTTGTGTCAGCCATC 59.965 45.455 16.70 0.00 0.00 3.51
2198 2236 2.863704 GCAAAGTTTGTGTCAGCCATCC 60.864 50.000 16.70 0.00 0.00 3.51
2199 2237 1.620822 AAGTTTGTGTCAGCCATCCC 58.379 50.000 0.00 0.00 0.00 3.85
2200 2238 0.773644 AGTTTGTGTCAGCCATCCCT 59.226 50.000 0.00 0.00 0.00 4.20
2201 2239 1.145738 AGTTTGTGTCAGCCATCCCTT 59.854 47.619 0.00 0.00 0.00 3.95
2202 2240 1.270550 GTTTGTGTCAGCCATCCCTTG 59.729 52.381 0.00 0.00 0.00 3.61
2203 2241 0.770499 TTGTGTCAGCCATCCCTTGA 59.230 50.000 0.00 0.00 0.00 3.02
2204 2242 0.994247 TGTGTCAGCCATCCCTTGAT 59.006 50.000 0.00 0.00 0.00 2.57
2205 2243 1.355381 TGTGTCAGCCATCCCTTGATT 59.645 47.619 0.00 0.00 0.00 2.57
2206 2244 1.747355 GTGTCAGCCATCCCTTGATTG 59.253 52.381 0.00 0.00 0.00 2.67
2207 2245 1.355381 TGTCAGCCATCCCTTGATTGT 59.645 47.619 0.00 0.00 0.00 2.71
2208 2246 1.747355 GTCAGCCATCCCTTGATTGTG 59.253 52.381 0.00 0.00 0.00 3.33
2209 2247 1.355381 TCAGCCATCCCTTGATTGTGT 59.645 47.619 0.00 0.00 0.00 3.72
2210 2248 1.475280 CAGCCATCCCTTGATTGTGTG 59.525 52.381 0.00 0.00 0.00 3.82
2211 2249 0.174162 GCCATCCCTTGATTGTGTGC 59.826 55.000 0.00 0.00 0.00 4.57
2212 2250 1.843368 CCATCCCTTGATTGTGTGCT 58.157 50.000 0.00 0.00 0.00 4.40
2213 2251 1.747355 CCATCCCTTGATTGTGTGCTC 59.253 52.381 0.00 0.00 0.00 4.26
2214 2252 1.399440 CATCCCTTGATTGTGTGCTCG 59.601 52.381 0.00 0.00 0.00 5.03
2215 2253 0.684535 TCCCTTGATTGTGTGCTCGA 59.315 50.000 0.00 0.00 0.00 4.04
2216 2254 1.071542 TCCCTTGATTGTGTGCTCGAA 59.928 47.619 0.00 0.00 0.00 3.71
2217 2255 1.197721 CCCTTGATTGTGTGCTCGAAC 59.802 52.381 0.00 0.00 0.00 3.95
2218 2256 1.872952 CCTTGATTGTGTGCTCGAACA 59.127 47.619 0.00 0.00 0.00 3.18
2232 2270 3.000815 GAACACTTGTTCGCCTGGA 57.999 52.632 6.36 0.00 43.97 3.86
2233 2271 0.586802 GAACACTTGTTCGCCTGGAC 59.413 55.000 6.36 0.00 43.97 4.02
2234 2272 1.157870 AACACTTGTTCGCCTGGACG 61.158 55.000 0.00 0.34 31.64 4.79
2235 2273 2.030562 ACTTGTTCGCCTGGACGG 59.969 61.111 0.00 0.00 0.00 4.79
2236 2274 2.342279 CTTGTTCGCCTGGACGGA 59.658 61.111 0.00 0.00 33.16 4.69
2237 2275 2.027625 CTTGTTCGCCTGGACGGAC 61.028 63.158 12.96 12.96 42.09 4.79
2239 2277 2.737376 GTTCGCCTGGACGGACAC 60.737 66.667 14.40 5.39 41.36 3.67
2240 2278 3.228017 TTCGCCTGGACGGACACA 61.228 61.111 0.00 0.00 33.16 3.72
2241 2279 2.579657 TTCGCCTGGACGGACACAT 61.580 57.895 0.00 0.00 33.16 3.21
2242 2280 2.501223 TTCGCCTGGACGGACACATC 62.501 60.000 0.00 0.00 33.16 3.06
2243 2281 2.662596 GCCTGGACGGACACATCA 59.337 61.111 0.00 0.00 33.16 3.07
2244 2282 1.741770 GCCTGGACGGACACATCAC 60.742 63.158 0.00 0.00 33.16 3.06
2245 2283 1.671166 CCTGGACGGACACATCACA 59.329 57.895 0.00 0.00 33.16 3.58
2246 2284 0.250234 CCTGGACGGACACATCACAT 59.750 55.000 0.00 0.00 33.16 3.21
2247 2285 1.362768 CTGGACGGACACATCACATG 58.637 55.000 0.00 0.00 0.00 3.21
2248 2286 0.036483 TGGACGGACACATCACATGG 60.036 55.000 0.00 0.00 33.60 3.66
2249 2287 0.249120 GGACGGACACATCACATGGA 59.751 55.000 0.00 0.00 33.60 3.41
2250 2288 1.359848 GACGGACACATCACATGGAC 58.640 55.000 0.00 0.00 33.60 4.02
2251 2289 0.976641 ACGGACACATCACATGGACT 59.023 50.000 0.00 0.00 33.60 3.85
2252 2290 1.066858 ACGGACACATCACATGGACTC 60.067 52.381 0.00 0.00 33.60 3.36
2253 2291 1.740380 CGGACACATCACATGGACTCC 60.740 57.143 0.00 0.00 33.60 3.85
2254 2292 1.645034 GACACATCACATGGACTCCG 58.355 55.000 0.00 0.00 33.60 4.63
2255 2293 0.250234 ACACATCACATGGACTCCGG 59.750 55.000 0.00 0.00 33.60 5.14
2256 2294 0.250234 CACATCACATGGACTCCGGT 59.750 55.000 0.00 0.00 33.60 5.28
2257 2295 0.537188 ACATCACATGGACTCCGGTC 59.463 55.000 0.00 0.00 41.43 4.79
2266 2304 2.439696 ACTCCGGTCCGAGTCCTT 59.560 61.111 14.39 0.00 38.83 3.36
2267 2305 1.678300 ACTCCGGTCCGAGTCCTTC 60.678 63.158 14.39 0.00 38.83 3.46
2268 2306 1.378778 CTCCGGTCCGAGTCCTTCT 60.379 63.158 14.39 0.00 0.00 2.85
2269 2307 1.378124 CTCCGGTCCGAGTCCTTCTC 61.378 65.000 14.39 0.00 39.62 2.87
2270 2308 1.378778 CCGGTCCGAGTCCTTCTCT 60.379 63.158 14.39 0.00 40.75 3.10
2271 2309 0.966370 CCGGTCCGAGTCCTTCTCTT 60.966 60.000 14.39 0.00 40.75 2.85
2272 2310 0.171455 CGGTCCGAGTCCTTCTCTTG 59.829 60.000 4.91 0.00 40.75 3.02
2273 2311 1.546961 GGTCCGAGTCCTTCTCTTGA 58.453 55.000 0.00 0.00 40.75 3.02
2274 2312 1.474879 GGTCCGAGTCCTTCTCTTGAG 59.525 57.143 0.00 0.00 40.75 3.02
2275 2313 1.135228 GTCCGAGTCCTTCTCTTGAGC 60.135 57.143 0.00 0.00 40.75 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 0.169672 TCGACGGTAGCAAGTGTAGC 59.830 55.000 0.00 0.00 0.00 3.58
58 59 2.345641 GGTGTCAATGAGTTGATCGACG 59.654 50.000 7.46 0.00 45.46 5.12
79 80 1.029408 TCCGCCATGTCCAATTTCCG 61.029 55.000 0.00 0.00 0.00 4.30
146 147 2.354510 CGGAGCGCAAAGGAATATTCAA 59.645 45.455 17.07 0.00 0.00 2.69
245 248 2.665537 CAGCAAGCTCTTTACGAGTCAG 59.334 50.000 0.00 0.00 41.98 3.51
331 334 2.363359 CCTTCTGCAAACCTTGAGCTTT 59.637 45.455 0.00 0.00 0.00 3.51
347 351 1.623811 ACCAGAATACACGCACCTTCT 59.376 47.619 0.00 0.00 0.00 2.85
414 419 4.490959 CGACTGTTGACTTTGATATGACGC 60.491 45.833 0.00 0.00 0.00 5.19
431 436 4.128925 AGACATACATTGCATCGACTGT 57.871 40.909 0.00 0.00 0.00 3.55
534 541 2.083628 ATCGGGGTCTTCGAATACCT 57.916 50.000 26.29 9.03 40.15 3.08
817 825 0.602638 TCCATGCTCAAAGTCGCGTT 60.603 50.000 5.77 0.00 0.00 4.84
930 938 3.495629 GCAGTGCCATCATCTCTCCAATA 60.496 47.826 2.85 0.00 0.00 1.90
1020 1028 5.121811 CGAGATTTCCAGAGATCCACAATT 58.878 41.667 0.00 0.00 0.00 2.32
1047 1056 4.369182 GTGCCACCATAGACATACTGTAC 58.631 47.826 0.00 0.00 0.00 2.90
1319 1330 5.346181 AGAGCCACTGTTTTCTAGGATAC 57.654 43.478 0.00 0.00 0.00 2.24
1320 1331 6.267928 GGATAGAGCCACTGTTTTCTAGGATA 59.732 42.308 0.00 0.00 0.00 2.59
1321 1332 5.071115 GGATAGAGCCACTGTTTTCTAGGAT 59.929 44.000 0.00 0.00 0.00 3.24
1322 1333 4.406003 GGATAGAGCCACTGTTTTCTAGGA 59.594 45.833 0.00 0.00 0.00 2.94
1323 1334 4.407296 AGGATAGAGCCACTGTTTTCTAGG 59.593 45.833 0.00 0.00 0.00 3.02
1324 1335 5.606348 AGGATAGAGCCACTGTTTTCTAG 57.394 43.478 0.00 0.00 0.00 2.43
1325 1336 5.598830 CCTAGGATAGAGCCACTGTTTTCTA 59.401 44.000 1.05 0.00 42.77 2.10
1326 1337 4.407296 CCTAGGATAGAGCCACTGTTTTCT 59.593 45.833 1.05 0.00 42.77 2.52
1327 1338 4.443598 CCCTAGGATAGAGCCACTGTTTTC 60.444 50.000 11.48 0.00 42.77 2.29
1328 1339 3.456277 CCCTAGGATAGAGCCACTGTTTT 59.544 47.826 11.48 0.00 42.77 2.43
1329 1340 3.041946 CCCTAGGATAGAGCCACTGTTT 58.958 50.000 11.48 0.00 42.77 2.83
1330 1341 2.683768 CCCTAGGATAGAGCCACTGTT 58.316 52.381 11.48 0.00 42.77 3.16
1331 1342 1.133009 CCCCTAGGATAGAGCCACTGT 60.133 57.143 11.48 0.00 42.77 3.55
1332 1343 1.133009 ACCCCTAGGATAGAGCCACTG 60.133 57.143 11.48 0.00 42.77 3.66
1333 1344 1.133009 CACCCCTAGGATAGAGCCACT 60.133 57.143 11.48 0.00 42.77 4.00
1334 1345 1.343069 CACCCCTAGGATAGAGCCAC 58.657 60.000 11.48 0.00 42.77 5.01
1335 1346 0.941963 ACACCCCTAGGATAGAGCCA 59.058 55.000 11.48 0.00 42.77 4.75
1336 1347 1.133136 TGACACCCCTAGGATAGAGCC 60.133 57.143 11.48 0.00 42.77 4.70
1337 1348 2.383442 TGACACCCCTAGGATAGAGC 57.617 55.000 11.48 0.00 42.77 4.09
1338 1349 5.221742 GGAATTTGACACCCCTAGGATAGAG 60.222 48.000 11.48 0.00 42.77 2.43
1339 1350 4.658901 GGAATTTGACACCCCTAGGATAGA 59.341 45.833 11.48 0.00 42.77 1.98
1340 1351 4.202472 GGGAATTTGACACCCCTAGGATAG 60.202 50.000 11.48 0.60 37.85 2.08
1341 1352 3.720002 GGGAATTTGACACCCCTAGGATA 59.280 47.826 11.48 0.00 37.85 2.59
1342 1353 2.514160 GGGAATTTGACACCCCTAGGAT 59.486 50.000 11.48 0.00 37.85 3.24
1343 1354 1.920351 GGGAATTTGACACCCCTAGGA 59.080 52.381 11.48 0.00 37.85 2.94
1344 1355 1.923148 AGGGAATTTGACACCCCTAGG 59.077 52.381 0.06 0.06 46.80 3.02
1345 1356 2.945890 GCAGGGAATTTGACACCCCTAG 60.946 54.545 0.00 0.00 46.94 3.02
1346 1357 1.005450 GCAGGGAATTTGACACCCCTA 59.995 52.381 0.00 0.00 46.94 3.53
1348 1359 0.251787 AGCAGGGAATTTGACACCCC 60.252 55.000 0.00 0.00 44.21 4.95
1349 1360 2.492088 GTTAGCAGGGAATTTGACACCC 59.508 50.000 0.00 0.00 43.55 4.61
1350 1361 3.153919 TGTTAGCAGGGAATTTGACACC 58.846 45.455 0.00 0.00 0.00 4.16
1351 1362 3.821033 ACTGTTAGCAGGGAATTTGACAC 59.179 43.478 11.56 0.00 46.62 3.67
1352 1363 4.098914 ACTGTTAGCAGGGAATTTGACA 57.901 40.909 11.56 0.00 46.62 3.58
1361 1372 3.690460 AGAAATTCCACTGTTAGCAGGG 58.310 45.455 11.56 6.70 46.62 4.45
1362 1373 9.950496 ATATATAGAAATTCCACTGTTAGCAGG 57.050 33.333 11.56 0.25 46.62 4.85
1385 1396 8.368668 CGGAGGGAGTGTATCTTTCTTTTATAT 58.631 37.037 0.00 0.00 0.00 0.86
1386 1397 7.343833 ACGGAGGGAGTGTATCTTTCTTTTATA 59.656 37.037 0.00 0.00 0.00 0.98
1387 1398 6.156429 ACGGAGGGAGTGTATCTTTCTTTTAT 59.844 38.462 0.00 0.00 0.00 1.40
1388 1399 5.482878 ACGGAGGGAGTGTATCTTTCTTTTA 59.517 40.000 0.00 0.00 0.00 1.52
1389 1400 4.286291 ACGGAGGGAGTGTATCTTTCTTTT 59.714 41.667 0.00 0.00 0.00 2.27
1390 1401 3.838903 ACGGAGGGAGTGTATCTTTCTTT 59.161 43.478 0.00 0.00 0.00 2.52
1391 1402 3.442076 ACGGAGGGAGTGTATCTTTCTT 58.558 45.455 0.00 0.00 0.00 2.52
1392 1403 3.103080 ACGGAGGGAGTGTATCTTTCT 57.897 47.619 0.00 0.00 0.00 2.52
1393 1404 3.430513 GGAACGGAGGGAGTGTATCTTTC 60.431 52.174 0.00 0.00 0.00 2.62
1394 1405 2.500504 GGAACGGAGGGAGTGTATCTTT 59.499 50.000 0.00 0.00 0.00 2.52
1395 1406 2.108970 GGAACGGAGGGAGTGTATCTT 58.891 52.381 0.00 0.00 0.00 2.40
1396 1407 1.006758 TGGAACGGAGGGAGTGTATCT 59.993 52.381 0.00 0.00 0.00 1.98
1397 1408 1.481871 TGGAACGGAGGGAGTGTATC 58.518 55.000 0.00 0.00 0.00 2.24
1398 1409 1.946984 TTGGAACGGAGGGAGTGTAT 58.053 50.000 0.00 0.00 0.00 2.29
1399 1410 1.719529 TTTGGAACGGAGGGAGTGTA 58.280 50.000 0.00 0.00 0.00 2.90
1400 1411 0.841289 TTTTGGAACGGAGGGAGTGT 59.159 50.000 0.00 0.00 0.00 3.55
1401 1412 2.200373 ATTTTGGAACGGAGGGAGTG 57.800 50.000 0.00 0.00 0.00 3.51
1402 1413 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
1403 1414 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
1404 1415 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
1405 1416 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1406 1417 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
1407 1418 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
1408 1419 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
1409 1420 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
1410 1421 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
1411 1422 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
1412 1423 8.893563 ATAAAGTTGGGTCATCTATTTTGGAA 57.106 30.769 0.00 0.00 0.00 3.53
1413 1424 9.403583 GTATAAAGTTGGGTCATCTATTTTGGA 57.596 33.333 0.00 0.00 0.00 3.53
1414 1425 9.408648 AGTATAAAGTTGGGTCATCTATTTTGG 57.591 33.333 0.00 0.00 0.00 3.28
1436 1447 8.873144 TGACCCAACTTTGTACTAACTTAGTAT 58.127 33.333 11.12 0.00 42.68 2.12
1437 1448 8.248904 TGACCCAACTTTGTACTAACTTAGTA 57.751 34.615 4.76 4.76 40.14 1.82
1438 1449 7.128234 TGACCCAACTTTGTACTAACTTAGT 57.872 36.000 6.68 6.68 42.68 2.24
1439 1450 8.095169 AGATGACCCAACTTTGTACTAACTTAG 58.905 37.037 0.00 0.00 0.00 2.18
1440 1451 7.970102 AGATGACCCAACTTTGTACTAACTTA 58.030 34.615 0.00 0.00 0.00 2.24
1441 1452 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
1442 1453 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
1443 1454 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
1444 1455 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
1445 1456 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
1446 1457 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
1447 1458 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
1448 1459 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
1449 1460 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
1450 1461 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
1451 1462 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
1452 1463 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
1453 1464 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
1454 1465 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
1455 1466 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
1456 1467 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
1457 1468 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
1458 1469 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
1459 1470 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1460 1471 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1461 1472 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1462 1473 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1463 1474 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1464 1475 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1465 1476 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
1466 1477 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
1467 1478 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
1468 1479 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
1469 1480 2.019807 AACTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
1470 1481 2.622452 CCTAACTACTCCCTCCGTTCCA 60.622 54.545 0.00 0.00 0.00 3.53
1471 1482 2.030371 CCTAACTACTCCCTCCGTTCC 58.970 57.143 0.00 0.00 0.00 3.62
1472 1483 2.732763 ACCTAACTACTCCCTCCGTTC 58.267 52.381 0.00 0.00 0.00 3.95
1473 1484 2.915657 ACCTAACTACTCCCTCCGTT 57.084 50.000 0.00 0.00 0.00 4.44
1474 1485 2.092158 GGTACCTAACTACTCCCTCCGT 60.092 54.545 4.06 0.00 0.00 4.69
1475 1486 2.092212 TGGTACCTAACTACTCCCTCCG 60.092 54.545 14.36 0.00 0.00 4.63
1476 1487 3.677156 TGGTACCTAACTACTCCCTCC 57.323 52.381 14.36 0.00 0.00 4.30
1477 1488 5.076182 GGTATGGTACCTAACTACTCCCTC 58.924 50.000 14.36 0.00 45.52 4.30
1478 1489 4.446889 CGGTATGGTACCTAACTACTCCCT 60.447 50.000 14.36 0.00 46.81 4.20
1479 1490 3.823304 CGGTATGGTACCTAACTACTCCC 59.177 52.174 14.36 0.00 46.81 4.30
1480 1491 4.464947 ACGGTATGGTACCTAACTACTCC 58.535 47.826 14.36 3.83 46.81 3.85
1481 1492 6.712547 ACATACGGTATGGTACCTAACTACTC 59.287 42.308 26.86 4.00 46.81 2.59
1482 1493 6.605119 ACATACGGTATGGTACCTAACTACT 58.395 40.000 26.86 3.72 46.81 2.57
1483 1494 6.712547 AGACATACGGTATGGTACCTAACTAC 59.287 42.308 26.86 9.27 46.81 2.73
1484 1495 6.841601 AGACATACGGTATGGTACCTAACTA 58.158 40.000 26.86 1.64 46.81 2.24
1485 1496 5.699143 AGACATACGGTATGGTACCTAACT 58.301 41.667 26.86 7.32 46.81 2.24
1486 1497 6.396829 AAGACATACGGTATGGTACCTAAC 57.603 41.667 26.86 10.82 46.81 2.34
1487 1498 7.779798 AGTAAAGACATACGGTATGGTACCTAA 59.220 37.037 26.86 8.00 46.81 2.69
1488 1499 7.229306 CAGTAAAGACATACGGTATGGTACCTA 59.771 40.741 26.86 12.01 46.81 3.08
1504 1515 5.361427 TGAAAACGATGGACAGTAAAGACA 58.639 37.500 0.00 0.00 0.00 3.41
1517 1528 4.875536 TCCATCCACTACATGAAAACGATG 59.124 41.667 0.00 4.92 0.00 3.84
1518 1529 5.097742 TCCATCCACTACATGAAAACGAT 57.902 39.130 0.00 0.00 0.00 3.73
1521 1532 7.073342 GTAGTTCCATCCACTACATGAAAAC 57.927 40.000 0.00 0.00 44.20 2.43
1532 1543 3.081061 TGCATTGTGTAGTTCCATCCAC 58.919 45.455 0.00 0.00 0.00 4.02
1537 1548 4.334552 ACATGATGCATTGTGTAGTTCCA 58.665 39.130 14.11 0.00 0.00 3.53
1544 1555 6.183360 GCTAAGAAGTACATGATGCATTGTGT 60.183 38.462 18.16 18.16 0.00 3.72
1590 1601 5.894298 AGCAGGATATCATTCTGTTGGTA 57.106 39.130 4.83 0.00 0.00 3.25
1598 1609 6.650807 TCCGATGTTTTAGCAGGATATCATTC 59.349 38.462 4.83 0.00 0.00 2.67
1602 1613 7.440523 AATTCCGATGTTTTAGCAGGATATC 57.559 36.000 0.00 0.00 0.00 1.63
1612 1624 5.941058 TGGCAGTTCTAATTCCGATGTTTTA 59.059 36.000 0.00 0.00 0.00 1.52
1613 1625 4.764823 TGGCAGTTCTAATTCCGATGTTTT 59.235 37.500 0.00 0.00 0.00 2.43
1625 1637 4.905429 TCTTTACATGCTGGCAGTTCTAA 58.095 39.130 17.16 4.41 0.00 2.10
1651 1663 5.393124 ACGTGTTTGCATCAATACATCAAG 58.607 37.500 0.00 0.00 0.00 3.02
1657 1669 4.153475 ACCAGTACGTGTTTGCATCAATAC 59.847 41.667 0.00 0.00 0.00 1.89
1665 1677 0.234884 GAGCACCAGTACGTGTTTGC 59.765 55.000 0.00 0.00 36.08 3.68
1673 1685 2.841442 ACTTCCAAGAGCACCAGTAC 57.159 50.000 0.00 0.00 0.00 2.73
1698 1710 5.899299 AGATTTGCAAGACATCCAAATAGC 58.101 37.500 0.00 0.00 38.77 2.97
1703 1715 4.143543 TGTGAGATTTGCAAGACATCCAA 58.856 39.130 0.00 0.00 0.00 3.53
1706 1718 6.028368 CAGAATGTGAGATTTGCAAGACATC 58.972 40.000 0.00 0.00 0.00 3.06
1715 1727 3.366679 GGGTGTGCAGAATGTGAGATTTG 60.367 47.826 0.00 0.00 39.31 2.32
1717 1729 2.224843 TGGGTGTGCAGAATGTGAGATT 60.225 45.455 0.00 0.00 39.31 2.40
1718 1730 1.352017 TGGGTGTGCAGAATGTGAGAT 59.648 47.619 0.00 0.00 39.31 2.75
1733 1745 1.065926 TGTGCTTCTAGATGCTGGGTG 60.066 52.381 25.75 0.00 33.23 4.61
1743 1755 5.082059 CGTGCTTTATTGTTGTGCTTCTAG 58.918 41.667 0.00 0.00 0.00 2.43
1744 1756 4.513692 ACGTGCTTTATTGTTGTGCTTCTA 59.486 37.500 0.00 0.00 0.00 2.10
1749 1761 2.900046 CGTACGTGCTTTATTGTTGTGC 59.100 45.455 7.22 0.00 0.00 4.57
1762 1774 0.457853 TCCATGAAGCTCGTACGTGC 60.458 55.000 29.42 29.42 35.16 5.34
1765 1777 1.278238 GGTTCCATGAAGCTCGTACG 58.722 55.000 9.53 9.53 37.13 3.67
1769 1781 2.614057 GGTAATGGTTCCATGAAGCTCG 59.386 50.000 5.02 0.00 40.24 5.03
1770 1782 3.891049 AGGTAATGGTTCCATGAAGCTC 58.109 45.455 5.02 0.00 40.24 4.09
1772 1784 5.376625 TGATAGGTAATGGTTCCATGAAGC 58.623 41.667 5.02 6.78 40.03 3.86
1814 1826 8.936864 GTGCACTAGAAATCTTGTTGTAACTAT 58.063 33.333 10.32 0.00 29.82 2.12
1825 1863 7.907214 AAACTTATCGTGCACTAGAAATCTT 57.093 32.000 16.19 0.00 0.00 2.40
1838 1876 8.970691 AATCTTGGAATCAAAAACTTATCGTG 57.029 30.769 0.00 0.00 31.77 4.35
1839 1877 9.981114 AAAATCTTGGAATCAAAAACTTATCGT 57.019 25.926 0.00 0.00 31.77 3.73
1847 1885 7.121759 TGTTTGGCAAAATCTTGGAATCAAAAA 59.878 29.630 15.29 0.00 32.76 1.94
1849 1887 6.038050 GTGTTTGGCAAAATCTTGGAATCAAA 59.962 34.615 15.29 0.00 32.76 2.69
1852 1890 4.452114 GGTGTTTGGCAAAATCTTGGAATC 59.548 41.667 15.29 0.00 32.76 2.52
1866 1904 1.989706 TTTCTACCAGGGTGTTTGGC 58.010 50.000 0.06 0.00 39.39 4.52
1875 1913 5.262588 ACTGCAAAAGTTTTTCTACCAGG 57.737 39.130 0.00 0.00 34.57 4.45
1889 1927 2.929531 TGTCTCGCAAAACTGCAAAA 57.070 40.000 0.00 0.00 34.41 2.44
1890 1928 2.796304 CTTGTCTCGCAAAACTGCAAA 58.204 42.857 0.00 0.00 36.53 3.68
1891 1929 1.533756 GCTTGTCTCGCAAAACTGCAA 60.534 47.619 0.00 0.00 36.53 4.08
1892 1930 0.029300 GCTTGTCTCGCAAAACTGCA 59.971 50.000 0.00 0.00 36.53 4.41
1893 1931 0.308993 AGCTTGTCTCGCAAAACTGC 59.691 50.000 0.00 0.00 36.53 4.40
1894 1932 2.032054 TCAAGCTTGTCTCGCAAAACTG 59.968 45.455 25.19 0.00 36.53 3.16
1895 1933 2.288666 TCAAGCTTGTCTCGCAAAACT 58.711 42.857 25.19 0.00 36.53 2.66
1896 1934 2.755836 TCAAGCTTGTCTCGCAAAAC 57.244 45.000 25.19 0.00 36.53 2.43
1897 1935 3.773860 TTTCAAGCTTGTCTCGCAAAA 57.226 38.095 25.19 13.68 36.53 2.44
1898 1936 3.988379 ATTTCAAGCTTGTCTCGCAAA 57.012 38.095 25.19 16.93 36.53 3.68
1902 1940 5.106948 TGCTAGAAATTTCAAGCTTGTCTCG 60.107 40.000 25.19 16.31 0.00 4.04
1927 1965 6.275618 ACCTGGGAGTATTATTGGCTTATCAT 59.724 38.462 0.00 0.00 0.00 2.45
1940 1978 8.612145 ACTGTTTAGATAAAACCTGGGAGTATT 58.388 33.333 0.00 0.00 45.83 1.89
1941 1979 8.159229 ACTGTTTAGATAAAACCTGGGAGTAT 57.841 34.615 0.00 0.00 45.83 2.12
1963 2001 0.596082 ATTTTCGGTTGGCGGAACTG 59.404 50.000 0.58 0.58 41.74 3.16
1964 2002 1.324383 AATTTTCGGTTGGCGGAACT 58.676 45.000 0.00 0.00 34.38 3.01
1965 2003 2.143008 AAATTTTCGGTTGGCGGAAC 57.857 45.000 0.00 0.00 34.38 3.62
1968 2006 1.729797 CGGTAAATTTTCGGTTGGCGG 60.730 52.381 0.00 0.00 0.00 6.13
1972 2010 4.735662 TCAGTCGGTAAATTTTCGGTTG 57.264 40.909 0.00 4.49 0.00 3.77
1988 2026 5.611844 CGACACGAAGTACCAATTTTCAGTC 60.612 44.000 0.00 0.00 41.61 3.51
2011 2049 0.868406 GCTGGAACTTCCTGTGTTCG 59.132 55.000 14.37 0.00 43.21 3.95
2014 2052 0.468226 TTCGCTGGAACTTCCTGTGT 59.532 50.000 21.31 0.00 43.66 3.72
2027 2065 2.855728 GAACATTGCCGGCTTCGCTG 62.856 60.000 29.70 18.55 34.23 5.18
2028 2066 2.672996 AACATTGCCGGCTTCGCT 60.673 55.556 29.70 6.54 0.00 4.93
2029 2067 2.202479 GAACATTGCCGGCTTCGC 60.202 61.111 29.70 8.41 0.00 4.70
2030 2068 2.098298 CGAACATTGCCGGCTTCG 59.902 61.111 27.16 27.16 0.00 3.79
2031 2069 1.298859 ACTCGAACATTGCCGGCTTC 61.299 55.000 29.70 21.09 0.00 3.86
2032 2070 1.302511 ACTCGAACATTGCCGGCTT 60.303 52.632 29.70 13.94 0.00 4.35
2033 2071 2.034879 CACTCGAACATTGCCGGCT 61.035 57.895 29.70 6.37 0.00 5.52
2034 2072 1.573829 TTCACTCGAACATTGCCGGC 61.574 55.000 22.73 22.73 0.00 6.13
2035 2073 0.443869 CTTCACTCGAACATTGCCGG 59.556 55.000 0.00 0.00 0.00 6.13
2036 2074 1.148310 ACTTCACTCGAACATTGCCG 58.852 50.000 0.00 0.00 0.00 5.69
2037 2075 2.350772 CCAACTTCACTCGAACATTGCC 60.351 50.000 0.00 0.00 0.00 4.52
2038 2076 2.918131 GCCAACTTCACTCGAACATTGC 60.918 50.000 0.00 0.00 0.00 3.56
2039 2077 2.662791 CGCCAACTTCACTCGAACATTG 60.663 50.000 0.00 0.00 0.00 2.82
2040 2078 1.531149 CGCCAACTTCACTCGAACATT 59.469 47.619 0.00 0.00 0.00 2.71
2041 2079 1.148310 CGCCAACTTCACTCGAACAT 58.852 50.000 0.00 0.00 0.00 2.71
2042 2080 0.878523 CCGCCAACTTCACTCGAACA 60.879 55.000 0.00 0.00 0.00 3.18
2043 2081 0.599204 TCCGCCAACTTCACTCGAAC 60.599 55.000 0.00 0.00 0.00 3.95
2044 2082 0.319555 CTCCGCCAACTTCACTCGAA 60.320 55.000 0.00 0.00 0.00 3.71
2045 2083 1.289066 CTCCGCCAACTTCACTCGA 59.711 57.895 0.00 0.00 0.00 4.04
2046 2084 2.383527 GCTCCGCCAACTTCACTCG 61.384 63.158 0.00 0.00 0.00 4.18
2047 2085 3.567473 GCTCCGCCAACTTCACTC 58.433 61.111 0.00 0.00 0.00 3.51
2057 2095 4.162690 AATCTCACCGGCTCCGCC 62.163 66.667 0.00 0.00 46.75 6.13
2058 2096 2.892425 CAATCTCACCGGCTCCGC 60.892 66.667 0.00 0.00 38.24 5.54
2059 2097 2.202932 CCAATCTCACCGGCTCCG 60.203 66.667 0.00 0.48 39.44 4.63
2060 2098 1.144936 CTCCAATCTCACCGGCTCC 59.855 63.158 0.00 0.00 0.00 4.70
2061 2099 1.144936 CCTCCAATCTCACCGGCTC 59.855 63.158 0.00 0.00 0.00 4.70
2062 2100 3.036429 GCCTCCAATCTCACCGGCT 62.036 63.158 0.00 0.00 34.80 5.52
2063 2101 2.514824 GCCTCCAATCTCACCGGC 60.515 66.667 0.00 0.00 0.00 6.13
2064 2102 0.462759 GAAGCCTCCAATCTCACCGG 60.463 60.000 0.00 0.00 0.00 5.28
2065 2103 0.539051 AGAAGCCTCCAATCTCACCG 59.461 55.000 0.00 0.00 0.00 4.94
2066 2104 1.407989 CCAGAAGCCTCCAATCTCACC 60.408 57.143 0.00 0.00 0.00 4.02
2067 2105 2.016096 GCCAGAAGCCTCCAATCTCAC 61.016 57.143 0.00 0.00 34.35 3.51
2068 2106 0.254178 GCCAGAAGCCTCCAATCTCA 59.746 55.000 0.00 0.00 34.35 3.27
2069 2107 0.254178 TGCCAGAAGCCTCCAATCTC 59.746 55.000 0.00 0.00 42.71 2.75
2070 2108 0.924823 ATGCCAGAAGCCTCCAATCT 59.075 50.000 0.00 0.00 42.71 2.40
2071 2109 1.030457 CATGCCAGAAGCCTCCAATC 58.970 55.000 0.00 0.00 42.71 2.67
2072 2110 0.396695 CCATGCCAGAAGCCTCCAAT 60.397 55.000 0.00 0.00 42.71 3.16
2073 2111 1.000521 CCATGCCAGAAGCCTCCAA 60.001 57.895 0.00 0.00 42.71 3.53
2074 2112 2.679092 CCATGCCAGAAGCCTCCA 59.321 61.111 0.00 0.00 42.71 3.86
2075 2113 2.832201 GCCATGCCAGAAGCCTCC 60.832 66.667 0.00 0.00 42.71 4.30
2076 2114 1.041447 ATTGCCATGCCAGAAGCCTC 61.041 55.000 0.00 0.00 42.71 4.70
2077 2115 0.616679 AATTGCCATGCCAGAAGCCT 60.617 50.000 0.00 0.00 42.71 4.58
2078 2116 0.251073 AAATTGCCATGCCAGAAGCC 59.749 50.000 0.00 0.00 42.71 4.35
2079 2117 1.735571 CAAAATTGCCATGCCAGAAGC 59.264 47.619 0.00 0.00 44.14 3.86
2080 2118 3.259064 CTCAAAATTGCCATGCCAGAAG 58.741 45.455 0.00 0.00 0.00 2.85
2081 2119 2.613474 GCTCAAAATTGCCATGCCAGAA 60.613 45.455 0.00 0.00 0.00 3.02
2082 2120 1.066716 GCTCAAAATTGCCATGCCAGA 60.067 47.619 0.00 0.00 0.00 3.86
2083 2121 1.338294 TGCTCAAAATTGCCATGCCAG 60.338 47.619 0.00 0.00 0.00 4.85
2084 2122 0.685660 TGCTCAAAATTGCCATGCCA 59.314 45.000 0.00 0.00 0.00 4.92
2085 2123 1.081094 GTGCTCAAAATTGCCATGCC 58.919 50.000 0.00 0.00 0.00 4.40
2086 2124 0.717224 CGTGCTCAAAATTGCCATGC 59.283 50.000 0.00 0.00 0.00 4.06
2087 2125 1.722464 CACGTGCTCAAAATTGCCATG 59.278 47.619 0.82 0.00 0.00 3.66
2088 2126 1.612950 TCACGTGCTCAAAATTGCCAT 59.387 42.857 11.67 0.00 0.00 4.40
2089 2127 1.001487 CTCACGTGCTCAAAATTGCCA 60.001 47.619 11.67 0.00 0.00 4.92
2090 2128 1.689959 CTCACGTGCTCAAAATTGCC 58.310 50.000 11.67 0.00 0.00 4.52
2091 2129 1.055338 GCTCACGTGCTCAAAATTGC 58.945 50.000 11.67 0.16 0.00 3.56
2092 2130 2.693797 AGCTCACGTGCTCAAAATTG 57.306 45.000 11.67 0.00 39.34 2.32
2093 2131 2.859806 GCAAGCTCACGTGCTCAAAATT 60.860 45.455 11.67 0.00 46.31 1.82
2094 2132 1.335324 GCAAGCTCACGTGCTCAAAAT 60.335 47.619 11.67 0.00 46.31 1.82
2095 2133 0.029300 GCAAGCTCACGTGCTCAAAA 59.971 50.000 11.67 0.00 46.31 2.44
2096 2134 1.648720 GCAAGCTCACGTGCTCAAA 59.351 52.632 11.67 0.00 46.31 2.69
2097 2135 3.333414 GCAAGCTCACGTGCTCAA 58.667 55.556 11.67 0.00 46.31 3.02
2102 2140 0.870393 ATTCAGTGCAAGCTCACGTG 59.130 50.000 9.94 9.94 41.61 4.49
2103 2141 1.151668 GATTCAGTGCAAGCTCACGT 58.848 50.000 0.00 0.00 41.61 4.49
2104 2142 1.436600 AGATTCAGTGCAAGCTCACG 58.563 50.000 0.00 0.00 41.61 4.35
2105 2143 2.935201 CCTAGATTCAGTGCAAGCTCAC 59.065 50.000 0.00 0.00 37.24 3.51
2106 2144 2.568956 ACCTAGATTCAGTGCAAGCTCA 59.431 45.455 0.00 0.00 0.00 4.26
2107 2145 3.258971 ACCTAGATTCAGTGCAAGCTC 57.741 47.619 0.00 0.00 0.00 4.09
2108 2146 3.710209 AACCTAGATTCAGTGCAAGCT 57.290 42.857 0.00 0.00 0.00 3.74
2109 2147 4.479619 CAAAACCTAGATTCAGTGCAAGC 58.520 43.478 0.00 0.00 0.00 4.01
2110 2148 4.520492 ACCAAAACCTAGATTCAGTGCAAG 59.480 41.667 0.00 0.00 0.00 4.01
2111 2149 4.469657 ACCAAAACCTAGATTCAGTGCAA 58.530 39.130 0.00 0.00 0.00 4.08
2112 2150 4.098914 ACCAAAACCTAGATTCAGTGCA 57.901 40.909 0.00 0.00 0.00 4.57
2113 2151 5.488341 TCTACCAAAACCTAGATTCAGTGC 58.512 41.667 0.00 0.00 0.00 4.40
2114 2152 6.936279 TCTCTACCAAAACCTAGATTCAGTG 58.064 40.000 0.00 0.00 0.00 3.66
2115 2153 7.554959 TTCTCTACCAAAACCTAGATTCAGT 57.445 36.000 0.00 0.00 0.00 3.41
2116 2154 8.097662 AGTTTCTCTACCAAAACCTAGATTCAG 58.902 37.037 0.00 0.00 36.29 3.02
2117 2155 7.974504 AGTTTCTCTACCAAAACCTAGATTCA 58.025 34.615 0.00 0.00 36.29 2.57
2118 2156 8.095169 TGAGTTTCTCTACCAAAACCTAGATTC 58.905 37.037 0.00 0.00 36.29 2.52
2119 2157 7.974504 TGAGTTTCTCTACCAAAACCTAGATT 58.025 34.615 0.00 0.00 36.29 2.40
2120 2158 7.554959 TGAGTTTCTCTACCAAAACCTAGAT 57.445 36.000 0.00 0.00 36.29 1.98
2121 2159 6.989155 TGAGTTTCTCTACCAAAACCTAGA 57.011 37.500 0.00 0.00 36.29 2.43
2122 2160 6.990349 TGTTGAGTTTCTCTACCAAAACCTAG 59.010 38.462 8.33 0.00 35.88 3.02
2123 2161 6.891388 TGTTGAGTTTCTCTACCAAAACCTA 58.109 36.000 8.33 0.00 35.88 3.08
2124 2162 5.751586 TGTTGAGTTTCTCTACCAAAACCT 58.248 37.500 8.33 0.00 35.88 3.50
2125 2163 6.486993 AGATGTTGAGTTTCTCTACCAAAACC 59.513 38.462 8.33 0.00 35.88 3.27
2126 2164 7.497925 AGATGTTGAGTTTCTCTACCAAAAC 57.502 36.000 8.33 0.00 35.88 2.43
2127 2165 8.519799 AAAGATGTTGAGTTTCTCTACCAAAA 57.480 30.769 8.33 0.00 35.88 2.44
2128 2166 8.519799 AAAAGATGTTGAGTTTCTCTACCAAA 57.480 30.769 8.33 0.00 35.88 3.28
2129 2167 8.519799 AAAAAGATGTTGAGTTTCTCTACCAA 57.480 30.769 8.33 0.00 35.88 3.67
2130 2168 9.793259 ATAAAAAGATGTTGAGTTTCTCTACCA 57.207 29.630 8.33 0.00 35.88 3.25
2133 2171 8.730680 GCCATAAAAAGATGTTGAGTTTCTCTA 58.269 33.333 0.00 0.00 0.00 2.43
2134 2172 7.231317 TGCCATAAAAAGATGTTGAGTTTCTCT 59.769 33.333 0.00 0.00 0.00 3.10
2135 2173 7.370383 TGCCATAAAAAGATGTTGAGTTTCTC 58.630 34.615 0.00 0.00 0.00 2.87
2136 2174 7.288810 TGCCATAAAAAGATGTTGAGTTTCT 57.711 32.000 0.00 0.00 0.00 2.52
2137 2175 7.945033 TTGCCATAAAAAGATGTTGAGTTTC 57.055 32.000 0.00 0.00 0.00 2.78
2138 2176 7.042791 CGTTTGCCATAAAAAGATGTTGAGTTT 60.043 33.333 0.00 0.00 0.00 2.66
2139 2177 6.420604 CGTTTGCCATAAAAAGATGTTGAGTT 59.579 34.615 0.00 0.00 0.00 3.01
2140 2178 5.920273 CGTTTGCCATAAAAAGATGTTGAGT 59.080 36.000 0.00 0.00 0.00 3.41
2141 2179 6.148948 TCGTTTGCCATAAAAAGATGTTGAG 58.851 36.000 0.00 0.00 0.00 3.02
2142 2180 6.078202 TCGTTTGCCATAAAAAGATGTTGA 57.922 33.333 0.00 0.00 0.00 3.18
2143 2181 5.345741 CCTCGTTTGCCATAAAAAGATGTTG 59.654 40.000 0.00 0.00 29.22 3.33
2144 2182 5.242838 TCCTCGTTTGCCATAAAAAGATGTT 59.757 36.000 0.00 0.00 29.22 2.71
2145 2183 4.764823 TCCTCGTTTGCCATAAAAAGATGT 59.235 37.500 0.00 0.00 29.22 3.06
2146 2184 5.095490 GTCCTCGTTTGCCATAAAAAGATG 58.905 41.667 0.00 0.00 29.22 2.90
2147 2185 4.764823 TGTCCTCGTTTGCCATAAAAAGAT 59.235 37.500 0.00 0.00 29.22 2.40
2148 2186 4.138290 TGTCCTCGTTTGCCATAAAAAGA 58.862 39.130 0.00 0.00 0.00 2.52
2149 2187 4.023193 ACTGTCCTCGTTTGCCATAAAAAG 60.023 41.667 0.00 0.00 0.00 2.27
2150 2188 3.886505 ACTGTCCTCGTTTGCCATAAAAA 59.113 39.130 0.00 0.00 0.00 1.94
2151 2189 3.482436 ACTGTCCTCGTTTGCCATAAAA 58.518 40.909 0.00 0.00 0.00 1.52
2152 2190 3.134574 ACTGTCCTCGTTTGCCATAAA 57.865 42.857 0.00 0.00 0.00 1.40
2153 2191 2.851263 ACTGTCCTCGTTTGCCATAA 57.149 45.000 0.00 0.00 0.00 1.90
2154 2192 2.037902 TGAACTGTCCTCGTTTGCCATA 59.962 45.455 0.00 0.00 0.00 2.74
2155 2193 1.202758 TGAACTGTCCTCGTTTGCCAT 60.203 47.619 0.00 0.00 0.00 4.40
2156 2194 0.179234 TGAACTGTCCTCGTTTGCCA 59.821 50.000 0.00 0.00 0.00 4.92
2157 2195 1.264288 CTTGAACTGTCCTCGTTTGCC 59.736 52.381 0.00 0.00 0.00 4.52
2158 2196 1.334149 GCTTGAACTGTCCTCGTTTGC 60.334 52.381 0.00 0.00 0.00 3.68
2159 2197 1.939934 TGCTTGAACTGTCCTCGTTTG 59.060 47.619 0.00 0.00 0.00 2.93
2160 2198 2.325583 TGCTTGAACTGTCCTCGTTT 57.674 45.000 0.00 0.00 0.00 3.60
2161 2199 2.325583 TTGCTTGAACTGTCCTCGTT 57.674 45.000 0.00 0.00 0.00 3.85
2162 2200 2.213499 CTTTGCTTGAACTGTCCTCGT 58.787 47.619 0.00 0.00 0.00 4.18
2163 2201 2.213499 ACTTTGCTTGAACTGTCCTCG 58.787 47.619 0.00 0.00 0.00 4.63
2164 2202 4.142381 ACAAACTTTGCTTGAACTGTCCTC 60.142 41.667 1.14 0.00 0.00 3.71
2165 2203 3.763897 ACAAACTTTGCTTGAACTGTCCT 59.236 39.130 1.14 0.00 0.00 3.85
2166 2204 3.859386 CACAAACTTTGCTTGAACTGTCC 59.141 43.478 1.14 0.00 0.00 4.02
2167 2205 4.485163 ACACAAACTTTGCTTGAACTGTC 58.515 39.130 1.14 0.00 0.00 3.51
2168 2206 4.022416 TGACACAAACTTTGCTTGAACTGT 60.022 37.500 1.14 0.00 0.00 3.55
2169 2207 4.484236 TGACACAAACTTTGCTTGAACTG 58.516 39.130 1.14 0.00 0.00 3.16
2170 2208 4.737054 CTGACACAAACTTTGCTTGAACT 58.263 39.130 1.14 0.00 0.00 3.01
2171 2209 3.304293 GCTGACACAAACTTTGCTTGAAC 59.696 43.478 1.14 0.00 0.00 3.18
2172 2210 3.510719 GCTGACACAAACTTTGCTTGAA 58.489 40.909 1.14 0.00 0.00 2.69
2173 2211 2.159254 GGCTGACACAAACTTTGCTTGA 60.159 45.455 1.14 0.00 0.00 3.02
2174 2212 2.195922 GGCTGACACAAACTTTGCTTG 58.804 47.619 1.14 0.00 0.00 4.01
2175 2213 1.824230 TGGCTGACACAAACTTTGCTT 59.176 42.857 1.14 0.00 0.00 3.91
2176 2214 1.473258 TGGCTGACACAAACTTTGCT 58.527 45.000 1.14 0.00 0.00 3.91
2177 2215 2.397549 GATGGCTGACACAAACTTTGC 58.602 47.619 1.14 0.00 0.00 3.68
2178 2216 2.288395 GGGATGGCTGACACAAACTTTG 60.288 50.000 0.00 0.00 0.00 2.77
2179 2217 1.963515 GGGATGGCTGACACAAACTTT 59.036 47.619 0.00 0.00 0.00 2.66
2180 2218 1.145738 AGGGATGGCTGACACAAACTT 59.854 47.619 0.00 0.00 0.00 2.66
2181 2219 0.773644 AGGGATGGCTGACACAAACT 59.226 50.000 0.00 0.00 0.00 2.66
2182 2220 1.270550 CAAGGGATGGCTGACACAAAC 59.729 52.381 0.00 0.00 0.00 2.93
2183 2221 1.144708 TCAAGGGATGGCTGACACAAA 59.855 47.619 0.00 0.00 0.00 2.83
2184 2222 0.770499 TCAAGGGATGGCTGACACAA 59.230 50.000 0.00 0.00 0.00 3.33
2185 2223 0.994247 ATCAAGGGATGGCTGACACA 59.006 50.000 0.00 0.00 30.86 3.72
2186 2224 1.747355 CAATCAAGGGATGGCTGACAC 59.253 52.381 0.00 0.00 32.92 3.67
2187 2225 1.355381 ACAATCAAGGGATGGCTGACA 59.645 47.619 0.00 0.00 32.92 3.58
2188 2226 1.747355 CACAATCAAGGGATGGCTGAC 59.253 52.381 0.00 0.00 32.92 3.51
2189 2227 1.355381 ACACAATCAAGGGATGGCTGA 59.645 47.619 0.00 0.00 32.92 4.26
2190 2228 1.475280 CACACAATCAAGGGATGGCTG 59.525 52.381 0.00 0.00 32.92 4.85
2191 2229 1.843368 CACACAATCAAGGGATGGCT 58.157 50.000 0.00 0.00 32.92 4.75
2192 2230 0.174162 GCACACAATCAAGGGATGGC 59.826 55.000 0.00 0.00 32.92 4.40
2193 2231 1.747355 GAGCACACAATCAAGGGATGG 59.253 52.381 0.00 0.00 32.92 3.51
2194 2232 1.399440 CGAGCACACAATCAAGGGATG 59.601 52.381 0.00 0.00 32.92 3.51
2195 2233 1.278985 TCGAGCACACAATCAAGGGAT 59.721 47.619 0.00 0.00 34.43 3.85
2196 2234 0.684535 TCGAGCACACAATCAAGGGA 59.315 50.000 0.00 0.00 0.00 4.20
2197 2235 1.197721 GTTCGAGCACACAATCAAGGG 59.802 52.381 0.00 0.00 0.00 3.95
2198 2236 1.872952 TGTTCGAGCACACAATCAAGG 59.127 47.619 0.00 0.00 0.00 3.61
2199 2237 2.908634 GTGTTCGAGCACACAATCAAG 58.091 47.619 25.21 0.00 45.57 3.02
2206 2244 2.368980 GAACAAGTGTTCGAGCACAC 57.631 50.000 30.23 21.24 46.48 3.82
2215 2253 1.157870 CGTCCAGGCGAACAAGTGTT 61.158 55.000 0.00 0.00 41.64 3.32
2216 2254 1.594293 CGTCCAGGCGAACAAGTGT 60.594 57.895 0.00 0.00 0.00 3.55
2217 2255 2.317609 CCGTCCAGGCGAACAAGTG 61.318 63.158 4.99 0.00 0.00 3.16
2218 2256 2.030562 CCGTCCAGGCGAACAAGT 59.969 61.111 4.99 0.00 0.00 3.16
2219 2257 2.027625 GTCCGTCCAGGCGAACAAG 61.028 63.158 4.99 0.00 40.77 3.16
2220 2258 2.029964 GTCCGTCCAGGCGAACAA 59.970 61.111 4.99 0.00 40.77 2.83
2221 2259 3.228017 TGTCCGTCCAGGCGAACA 61.228 61.111 4.99 0.00 40.77 3.18
2222 2260 2.737376 GTGTCCGTCCAGGCGAAC 60.737 66.667 4.99 0.00 40.77 3.95
2223 2261 2.501223 GATGTGTCCGTCCAGGCGAA 62.501 60.000 4.99 0.00 40.77 4.70
2224 2262 2.994995 ATGTGTCCGTCCAGGCGA 60.995 61.111 4.99 0.00 40.77 5.54
2225 2263 2.509336 GATGTGTCCGTCCAGGCG 60.509 66.667 0.00 0.00 40.77 5.52
2226 2264 1.741770 GTGATGTGTCCGTCCAGGC 60.742 63.158 0.00 0.00 40.77 4.85
2227 2265 0.250234 ATGTGATGTGTCCGTCCAGG 59.750 55.000 0.00 0.00 42.97 4.45
2228 2266 1.362768 CATGTGATGTGTCCGTCCAG 58.637 55.000 0.00 0.00 0.00 3.86
2229 2267 0.036483 CCATGTGATGTGTCCGTCCA 60.036 55.000 0.00 0.00 0.00 4.02
2230 2268 0.249120 TCCATGTGATGTGTCCGTCC 59.751 55.000 0.00 0.00 0.00 4.79
2231 2269 1.066858 AGTCCATGTGATGTGTCCGTC 60.067 52.381 0.00 0.00 0.00 4.79
2232 2270 0.976641 AGTCCATGTGATGTGTCCGT 59.023 50.000 0.00 0.00 0.00 4.69
2233 2271 1.645034 GAGTCCATGTGATGTGTCCG 58.355 55.000 0.00 0.00 0.00 4.79
2234 2272 1.740380 CGGAGTCCATGTGATGTGTCC 60.740 57.143 10.49 0.00 0.00 4.02
2235 2273 1.645034 CGGAGTCCATGTGATGTGTC 58.355 55.000 10.49 0.00 0.00 3.67
2236 2274 0.250234 CCGGAGTCCATGTGATGTGT 59.750 55.000 10.49 0.00 0.00 3.72
2237 2275 0.250234 ACCGGAGTCCATGTGATGTG 59.750 55.000 9.46 0.00 0.00 3.21
2238 2276 0.537188 GACCGGAGTCCATGTGATGT 59.463 55.000 9.46 0.00 37.00 3.06
2239 2277 3.369381 GACCGGAGTCCATGTGATG 57.631 57.895 9.46 0.00 37.00 3.07
2250 2288 1.378124 GAGAAGGACTCGGACCGGAG 61.378 65.000 15.25 12.44 39.97 4.63
2251 2289 1.378250 GAGAAGGACTCGGACCGGA 60.378 63.158 15.25 0.00 35.84 5.14
2252 2290 3.198582 GAGAAGGACTCGGACCGG 58.801 66.667 15.25 0.00 35.84 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.