Multiple sequence alignment - TraesCS3D01G291100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G291100 chr3D 100.000 2546 0 0 1 2546 401170332 401172877 0.000000e+00 4702.0
1 TraesCS3D01G291100 chr3D 88.424 311 32 1 1897 2207 475868471 475868777 3.090000e-99 372.0
2 TraesCS3D01G291100 chr3D 84.416 154 17 5 1321 1472 330062833 330062685 7.340000e-31 145.0
3 TraesCS3D01G291100 chr3B 90.182 1426 53 26 490 1894 526938050 526939409 0.000000e+00 1777.0
4 TraesCS3D01G291100 chr3B 94.410 161 7 2 2363 2522 526960193 526960352 1.960000e-61 246.0
5 TraesCS3D01G291100 chr3B 92.562 121 2 4 2246 2359 526939428 526939548 1.570000e-37 167.0
6 TraesCS3D01G291100 chr3B 83.117 154 19 5 1321 1472 427590204 427590056 1.590000e-27 134.0
7 TraesCS3D01G291100 chr3A 88.332 1337 45 24 577 1877 521628878 521630139 0.000000e+00 1502.0
8 TraesCS3D01G291100 chr3A 93.103 261 10 5 2246 2499 521630161 521630420 2.390000e-100 375.0
9 TraesCS3D01G291100 chr7D 82.600 500 63 12 1 498 589042221 589041744 1.090000e-113 420.0
10 TraesCS3D01G291100 chr7D 90.260 308 26 1 1897 2204 305461969 305461666 1.420000e-107 399.0
11 TraesCS3D01G291100 chr5A 83.333 474 56 13 11 480 544211976 544212430 1.410000e-112 416.0
12 TraesCS3D01G291100 chr5A 100.000 28 0 0 466 493 544239463 544239490 5.000000e-03 52.8
13 TraesCS3D01G291100 chr2B 83.297 461 52 12 1 455 2085159 2084718 3.950000e-108 401.0
14 TraesCS3D01G291100 chr2B 79.036 415 52 19 94 502 749908598 749908983 4.200000e-63 252.0
15 TraesCS3D01G291100 chr2B 97.143 35 0 1 464 498 2084362 2084329 9.840000e-05 58.4
16 TraesCS3D01G291100 chr2D 89.137 313 30 3 1897 2209 592184356 592184048 1.100000e-103 387.0
17 TraesCS3D01G291100 chr2D 80.220 182 31 5 1313 1491 528589616 528589437 5.720000e-27 132.0
18 TraesCS3D01G291100 chr7A 88.636 308 30 2 1897 2204 84459457 84459759 1.110000e-98 370.0
19 TraesCS3D01G291100 chr7A 88.424 311 29 3 1897 2204 546432012 546431706 4.000000e-98 368.0
20 TraesCS3D01G291100 chr1A 88.312 308 32 1 1897 2204 576865423 576865726 1.440000e-97 366.0
21 TraesCS3D01G291100 chr1A 78.286 175 30 7 1321 1491 517520082 517520252 3.460000e-19 106.0
22 TraesCS3D01G291100 chr5D 87.987 308 33 1 1897 2204 65117453 65117150 6.700000e-96 361.0
23 TraesCS3D01G291100 chr5D 88.197 305 32 1 1897 2201 136352237 136351937 6.700000e-96 361.0
24 TraesCS3D01G291100 chr4B 88.235 306 30 4 1904 2208 506915933 506916233 6.700000e-96 361.0
25 TraesCS3D01G291100 chr6D 81.712 257 39 6 1 255 430275651 430275901 9.230000e-50 207.0
26 TraesCS3D01G291100 chr6D 79.044 272 33 13 232 503 430279165 430279412 5.640000e-37 165.0
27 TraesCS3D01G291100 chrUn 78.899 218 34 7 1 215 362740331 362740539 1.230000e-28 137.0
28 TraesCS3D01G291100 chr1B 79.545 176 34 2 1318 1492 652925522 652925348 9.560000e-25 124.0
29 TraesCS3D01G291100 chr5B 79.191 173 32 4 1321 1491 710314067 710313897 1.600000e-22 117.0
30 TraesCS3D01G291100 chr4D 78.481 158 30 4 1336 1491 480920566 480920411 1.610000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G291100 chr3D 401170332 401172877 2545 False 4702.0 4702 100.0000 1 2546 1 chr3D.!!$F1 2545
1 TraesCS3D01G291100 chr3B 526938050 526939548 1498 False 972.0 1777 91.3720 490 2359 2 chr3B.!!$F2 1869
2 TraesCS3D01G291100 chr3A 521628878 521630420 1542 False 938.5 1502 90.7175 577 2499 2 chr3A.!!$F1 1922
3 TraesCS3D01G291100 chr2B 2084329 2085159 830 True 229.7 401 90.2200 1 498 2 chr2B.!!$R1 497

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
497 846 0.249657 CTGATTCCTAGCACTCGCCC 60.25 60.0 0.0 0.0 39.83 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1716 2092 0.03582 AAATAGCACCTTCGCCCGAA 60.036 50.0 2.92 2.92 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 5.303747 ACAAATTGAATAAATGGTCGCGA 57.696 34.783 3.71 3.71 0.00 5.87
61 62 3.738982 TGAATAAATGGTCGCGATGGAT 58.261 40.909 14.06 1.32 0.00 3.41
63 64 5.301555 TGAATAAATGGTCGCGATGGATAA 58.698 37.500 14.06 0.00 0.00 1.75
67 68 3.963383 ATGGTCGCGATGGATAAAAAC 57.037 42.857 14.06 0.00 0.00 2.43
72 73 3.372822 GTCGCGATGGATAAAAACCTCAA 59.627 43.478 14.06 0.00 0.00 3.02
73 74 4.035208 GTCGCGATGGATAAAAACCTCAAT 59.965 41.667 14.06 0.00 0.00 2.57
77 78 5.163561 GCGATGGATAAAAACCTCAATGGAA 60.164 40.000 0.00 0.00 39.71 3.53
89 90 8.421249 AAACCTCAATGGAATGAAACAATCTA 57.579 30.769 0.00 0.00 39.71 1.98
98 99 7.819644 TGGAATGAAACAATCTACTGTTGATG 58.180 34.615 5.53 3.59 39.47 3.07
110 111 4.942761 ACTGTTGATGTGGAAGCAAATT 57.057 36.364 0.00 0.00 0.00 1.82
138 139 9.028185 GCTAGGAAATAGAAGCAAAATGAATTG 57.972 33.333 0.00 0.00 35.05 2.32
159 160 6.707440 TTGAATTGTTCAAGTGCTAGGAAA 57.293 33.333 1.24 0.00 44.21 3.13
161 162 7.994425 TGAATTGTTCAAGTGCTAGGAAATA 57.006 32.000 0.00 0.00 36.59 1.40
162 163 8.044060 TGAATTGTTCAAGTGCTAGGAAATAG 57.956 34.615 0.00 0.00 36.59 1.73
163 164 7.882791 TGAATTGTTCAAGTGCTAGGAAATAGA 59.117 33.333 0.00 0.00 36.59 1.98
164 165 8.635765 AATTGTTCAAGTGCTAGGAAATAGAA 57.364 30.769 0.00 0.00 32.76 2.10
165 166 7.672983 TTGTTCAAGTGCTAGGAAATAGAAG 57.327 36.000 0.00 0.00 32.76 2.85
168 169 5.804639 TCAAGTGCTAGGAAATAGAAGCAA 58.195 37.500 0.00 0.00 45.81 3.91
170 171 6.714810 TCAAGTGCTAGGAAATAGAAGCAAAA 59.285 34.615 0.00 0.00 45.81 2.44
171 172 7.394359 TCAAGTGCTAGGAAATAGAAGCAAAAT 59.606 33.333 0.00 0.00 45.81 1.82
172 173 8.677300 CAAGTGCTAGGAAATAGAAGCAAAATA 58.323 33.333 0.00 0.00 45.81 1.40
173 174 8.807948 AGTGCTAGGAAATAGAAGCAAAATAA 57.192 30.769 0.00 0.00 45.81 1.40
219 221 1.141019 CTGGCCAACAGCATGCATC 59.859 57.895 21.98 1.50 46.50 3.91
223 225 0.744874 GCCAACAGCATGCATCAGAT 59.255 50.000 21.98 0.00 42.53 2.90
225 227 1.067060 CCAACAGCATGCATCAGATGG 59.933 52.381 21.98 15.82 42.53 3.51
228 230 1.212195 ACAGCATGCATCAGATGGACT 59.788 47.619 21.98 1.01 42.53 3.85
236 238 5.016051 TGCATCAGATGGACTAGTTTCTC 57.984 43.478 12.54 0.00 0.00 2.87
238 240 4.100808 GCATCAGATGGACTAGTTTCTCCT 59.899 45.833 12.54 0.00 0.00 3.69
245 247 8.410141 CAGATGGACTAGTTTCTCCTAGTTTAG 58.590 40.741 0.00 0.00 45.88 1.85
258 260 7.450074 TCTCCTAGTTTAGTGCAGATTTCAAA 58.550 34.615 0.00 0.00 0.00 2.69
260 262 6.149474 TCCTAGTTTAGTGCAGATTTCAAAGC 59.851 38.462 0.00 0.00 0.00 3.51
261 263 5.772825 AGTTTAGTGCAGATTTCAAAGCA 57.227 34.783 0.00 0.00 34.10 3.91
274 276 2.333926 TCAAAGCACGTACGGATGAAG 58.666 47.619 21.06 5.47 0.00 3.02
278 280 0.457853 GCACGTACGGATGAAGCAGA 60.458 55.000 21.06 0.00 0.00 4.26
285 287 1.065854 ACGGATGAAGCAGAAAGGAGG 60.066 52.381 0.00 0.00 0.00 4.30
287 289 2.741228 CGGATGAAGCAGAAAGGAGGAG 60.741 54.545 0.00 0.00 0.00 3.69
288 290 2.421248 GGATGAAGCAGAAAGGAGGAGG 60.421 54.545 0.00 0.00 0.00 4.30
293 295 1.550976 AGCAGAAAGGAGGAGGTTACG 59.449 52.381 0.00 0.00 0.00 3.18
300 302 2.108970 AGGAGGAGGTTACGGCTAAAG 58.891 52.381 0.00 0.00 0.00 1.85
301 303 1.829849 GGAGGAGGTTACGGCTAAAGT 59.170 52.381 0.00 0.00 0.00 2.66
302 304 2.418334 GGAGGAGGTTACGGCTAAAGTG 60.418 54.545 0.00 0.00 0.00 3.16
303 305 2.494870 GAGGAGGTTACGGCTAAAGTGA 59.505 50.000 0.00 0.00 0.00 3.41
304 306 3.105283 AGGAGGTTACGGCTAAAGTGAT 58.895 45.455 0.00 0.00 0.00 3.06
331 333 4.014406 TGTAGGTCTAGCGTGATTTCTGA 58.986 43.478 0.00 0.00 0.00 3.27
343 345 4.260170 GTGATTTCTGAGGAGCAGTTGAT 58.740 43.478 0.00 0.00 45.14 2.57
352 354 2.158475 AGGAGCAGTTGATGGGAAACAA 60.158 45.455 0.00 0.00 0.00 2.83
357 359 3.305335 GCAGTTGATGGGAAACAAATCGT 60.305 43.478 0.00 0.00 0.00 3.73
368 370 6.027749 GGGAAACAAATCGTAATTAGTGCAG 58.972 40.000 0.00 0.00 0.00 4.41
394 396 6.923199 TGCAAACTAACTAACTACCTAGGT 57.077 37.500 20.57 20.57 0.00 3.08
416 418 2.069273 CACCTCTTCAATCACACGGTC 58.931 52.381 0.00 0.00 0.00 4.79
431 433 1.721664 CGGTCCAGGCTGCATCAATG 61.722 60.000 9.56 0.00 0.00 2.82
446 448 3.880047 TCAATGTAACGGTGGACTAGG 57.120 47.619 0.00 0.00 0.00 3.02
455 457 2.508716 ACGGTGGACTAGGAGTCTGATA 59.491 50.000 6.58 0.00 44.46 2.15
456 458 3.138653 ACGGTGGACTAGGAGTCTGATAT 59.861 47.826 6.58 0.00 44.46 1.63
457 459 4.350225 ACGGTGGACTAGGAGTCTGATATA 59.650 45.833 6.58 0.00 44.46 0.86
458 460 4.938832 CGGTGGACTAGGAGTCTGATATAG 59.061 50.000 6.58 0.00 44.46 1.31
459 461 5.280062 CGGTGGACTAGGAGTCTGATATAGA 60.280 48.000 6.58 0.00 44.46 1.98
460 462 6.544650 GGTGGACTAGGAGTCTGATATAGAA 58.455 44.000 6.58 0.00 44.46 2.10
461 463 7.005296 GGTGGACTAGGAGTCTGATATAGAAA 58.995 42.308 6.58 0.00 44.46 2.52
462 464 7.175990 GGTGGACTAGGAGTCTGATATAGAAAG 59.824 44.444 6.58 0.00 44.46 2.62
493 842 4.884744 TCAGTAGTCTGATTCCTAGCACTC 59.115 45.833 0.00 0.00 44.58 3.51
494 843 3.880490 AGTAGTCTGATTCCTAGCACTCG 59.120 47.826 0.00 0.00 0.00 4.18
497 846 0.249657 CTGATTCCTAGCACTCGCCC 60.250 60.000 0.00 0.00 39.83 6.13
504 853 1.234821 CTAGCACTCGCCCAAAACAA 58.765 50.000 0.00 0.00 39.83 2.83
505 854 1.606668 CTAGCACTCGCCCAAAACAAA 59.393 47.619 0.00 0.00 39.83 2.83
530 879 3.624861 ACGCACATTGCCAAAATGAAAAA 59.375 34.783 5.13 0.00 41.12 1.94
533 882 4.557097 GCACATTGCCAAAATGAAAAAGGG 60.557 41.667 5.13 0.00 37.42 3.95
534 883 3.569277 ACATTGCCAAAATGAAAAAGGGC 59.431 39.130 5.13 0.00 41.70 5.19
535 884 1.876322 TGCCAAAATGAAAAAGGGCG 58.124 45.000 0.00 0.00 44.21 6.13
536 885 0.516877 GCCAAAATGAAAAAGGGCGC 59.483 50.000 0.00 0.00 0.00 6.53
537 886 1.876322 CCAAAATGAAAAAGGGCGCA 58.124 45.000 10.83 0.00 0.00 6.09
538 887 1.530720 CCAAAATGAAAAAGGGCGCAC 59.469 47.619 10.83 5.15 0.00 5.34
598 947 1.338020 CAACCAGTCCAGAACCTTTGC 59.662 52.381 0.00 0.00 0.00 3.68
605 954 2.118294 AGAACCTTTGCCCTGCCC 59.882 61.111 0.00 0.00 0.00 5.36
609 958 4.659172 CCTTTGCCCTGCCCGTCA 62.659 66.667 0.00 0.00 0.00 4.35
630 979 2.135933 GTCCCTTCGAGAACAACACTG 58.864 52.381 0.00 0.00 0.00 3.66
631 980 1.070134 TCCCTTCGAGAACAACACTGG 59.930 52.381 0.00 0.00 0.00 4.00
632 981 0.868406 CCTTCGAGAACAACACTGGC 59.132 55.000 0.00 0.00 0.00 4.85
633 982 1.541233 CCTTCGAGAACAACACTGGCT 60.541 52.381 0.00 0.00 0.00 4.75
634 983 1.795286 CTTCGAGAACAACACTGGCTC 59.205 52.381 0.00 0.00 0.00 4.70
635 984 0.750249 TCGAGAACAACACTGGCTCA 59.250 50.000 0.00 0.00 31.80 4.26
710 1059 2.351322 CGCTCCGACGACGATCTG 60.351 66.667 9.28 0.00 42.66 2.90
789 1139 4.202409 CCTTGTTTCTCTTTGTCCTCCTCT 60.202 45.833 0.00 0.00 0.00 3.69
790 1140 4.342862 TGTTTCTCTTTGTCCTCCTCTG 57.657 45.455 0.00 0.00 0.00 3.35
791 1141 3.070748 GTTTCTCTTTGTCCTCCTCTGC 58.929 50.000 0.00 0.00 0.00 4.26
792 1142 1.270907 TCTCTTTGTCCTCCTCTGCC 58.729 55.000 0.00 0.00 0.00 4.85
793 1143 1.203237 TCTCTTTGTCCTCCTCTGCCT 60.203 52.381 0.00 0.00 0.00 4.75
860 1210 4.477975 CCACGCGGTCTCGGTCTC 62.478 72.222 12.47 0.00 36.79 3.36
946 1296 7.332182 GCTGTAAATAGCAACATATACCTCTCC 59.668 40.741 0.00 0.00 43.17 3.71
976 1327 1.076727 AGCAAGCTAAACCCCCACC 59.923 57.895 0.00 0.00 0.00 4.61
977 1328 2.340328 GCAAGCTAAACCCCCACCG 61.340 63.158 0.00 0.00 0.00 4.94
1556 1929 1.999051 CGAGGTGAATGCTACGTGC 59.001 57.895 0.00 0.00 43.25 5.34
1557 1930 1.742900 CGAGGTGAATGCTACGTGCG 61.743 60.000 0.00 0.00 46.63 5.34
1558 1931 0.736325 GAGGTGAATGCTACGTGCGT 60.736 55.000 0.00 2.05 46.63 5.24
1575 1948 1.194896 CGTTCGTTCTCTCGCCGATC 61.195 60.000 0.00 0.00 0.00 3.69
1588 1961 0.309612 GCCGATCGTTCCTCTCTCTC 59.690 60.000 15.09 0.00 0.00 3.20
1589 1962 1.961793 CCGATCGTTCCTCTCTCTCT 58.038 55.000 15.09 0.00 0.00 3.10
1596 1969 2.223479 CGTTCCTCTCTCTCTTAGCTGC 60.223 54.545 0.00 0.00 0.00 5.25
1622 1995 6.204108 GTGTTGTTAGCTTCTTAGTTTAGGCA 59.796 38.462 0.00 0.00 0.00 4.75
1623 1996 6.940298 TGTTGTTAGCTTCTTAGTTTAGGCAT 59.060 34.615 0.00 0.00 0.00 4.40
1624 1997 7.119262 TGTTGTTAGCTTCTTAGTTTAGGCATC 59.881 37.037 0.00 0.00 0.00 3.91
1625 1998 5.810587 TGTTAGCTTCTTAGTTTAGGCATCG 59.189 40.000 0.00 0.00 0.00 3.84
1626 1999 4.737855 AGCTTCTTAGTTTAGGCATCGA 57.262 40.909 0.00 0.00 0.00 3.59
1627 2000 5.086104 AGCTTCTTAGTTTAGGCATCGAA 57.914 39.130 0.00 0.00 0.00 3.71
1628 2001 5.488341 AGCTTCTTAGTTTAGGCATCGAAA 58.512 37.500 0.00 0.00 0.00 3.46
1629 2002 5.351740 AGCTTCTTAGTTTAGGCATCGAAAC 59.648 40.000 0.00 0.00 38.30 2.78
1630 2003 5.121768 GCTTCTTAGTTTAGGCATCGAAACA 59.878 40.000 0.00 0.00 39.76 2.83
1631 2004 6.183360 GCTTCTTAGTTTAGGCATCGAAACAT 60.183 38.462 0.00 0.00 39.76 2.71
1632 2005 7.626452 GCTTCTTAGTTTAGGCATCGAAACATT 60.626 37.037 0.00 0.00 39.76 2.71
1702 2078 2.336667 GACCAATTTGCATTTCGTGGG 58.663 47.619 0.00 0.00 0.00 4.61
1703 2079 1.691434 ACCAATTTGCATTTCGTGGGT 59.309 42.857 0.00 0.00 0.00 4.51
1704 2080 2.894126 ACCAATTTGCATTTCGTGGGTA 59.106 40.909 0.00 0.00 0.00 3.69
1705 2081 3.513515 ACCAATTTGCATTTCGTGGGTAT 59.486 39.130 0.00 0.00 0.00 2.73
1706 2082 4.111916 CCAATTTGCATTTCGTGGGTATC 58.888 43.478 0.00 0.00 0.00 2.24
1707 2083 3.691049 ATTTGCATTTCGTGGGTATCG 57.309 42.857 0.00 0.00 0.00 2.92
1708 2084 2.102070 TTGCATTTCGTGGGTATCGT 57.898 45.000 0.00 0.00 0.00 3.73
1709 2085 1.647346 TGCATTTCGTGGGTATCGTC 58.353 50.000 0.00 0.00 0.00 4.20
1710 2086 1.206132 TGCATTTCGTGGGTATCGTCT 59.794 47.619 0.00 0.00 0.00 4.18
1711 2087 1.859080 GCATTTCGTGGGTATCGTCTC 59.141 52.381 0.00 0.00 0.00 3.36
1712 2088 2.481449 GCATTTCGTGGGTATCGTCTCT 60.481 50.000 0.00 0.00 0.00 3.10
1713 2089 3.243301 GCATTTCGTGGGTATCGTCTCTA 60.243 47.826 0.00 0.00 0.00 2.43
1714 2090 4.537965 CATTTCGTGGGTATCGTCTCTAG 58.462 47.826 0.00 0.00 0.00 2.43
1715 2091 1.590932 TCGTGGGTATCGTCTCTAGC 58.409 55.000 0.00 0.00 0.00 3.42
1716 2092 1.140452 TCGTGGGTATCGTCTCTAGCT 59.860 52.381 0.00 0.00 0.00 3.32
1717 2093 1.948145 CGTGGGTATCGTCTCTAGCTT 59.052 52.381 0.00 0.00 0.00 3.74
1718 2094 2.031857 CGTGGGTATCGTCTCTAGCTTC 60.032 54.545 0.00 0.00 0.00 3.86
1719 2095 2.031857 GTGGGTATCGTCTCTAGCTTCG 60.032 54.545 0.00 0.00 0.00 3.79
1720 2096 1.536331 GGGTATCGTCTCTAGCTTCGG 59.464 57.143 0.00 0.00 0.00 4.30
1721 2097 1.536331 GGTATCGTCTCTAGCTTCGGG 59.464 57.143 0.00 0.00 0.00 5.14
1722 2098 1.069091 GTATCGTCTCTAGCTTCGGGC 60.069 57.143 0.00 0.00 42.19 6.13
1831 2220 9.062524 TCTGAAATTTTACGAAATCTGGAGAAA 57.937 29.630 0.00 0.00 34.44 2.52
1873 2262 2.028020 AGACAGATTCCCTCGACAAACC 60.028 50.000 0.00 0.00 0.00 3.27
1886 2275 6.338146 CCTCGACAAACCTTGTATTCATCTA 58.662 40.000 0.00 0.00 45.52 1.98
1887 2276 6.255887 CCTCGACAAACCTTGTATTCATCTAC 59.744 42.308 0.00 0.00 45.52 2.59
1890 2279 6.475727 CGACAAACCTTGTATTCATCTACGAT 59.524 38.462 0.00 0.00 45.52 3.73
1891 2280 7.010183 CGACAAACCTTGTATTCATCTACGATT 59.990 37.037 0.00 0.00 45.52 3.34
1892 2281 8.197988 ACAAACCTTGTATTCATCTACGATTC 57.802 34.615 0.00 0.00 43.27 2.52
1893 2282 7.280205 ACAAACCTTGTATTCATCTACGATTCC 59.720 37.037 0.00 0.00 43.27 3.01
1906 2295 0.175760 CGATTCCTCGGCTCCTTTGA 59.824 55.000 0.00 0.00 41.27 2.69
1908 2297 2.743183 CGATTCCTCGGCTCCTTTGATT 60.743 50.000 0.00 0.00 41.27 2.57
1909 2298 2.879103 TTCCTCGGCTCCTTTGATTT 57.121 45.000 0.00 0.00 0.00 2.17
1910 2299 3.992943 TTCCTCGGCTCCTTTGATTTA 57.007 42.857 0.00 0.00 0.00 1.40
1911 2300 3.992943 TCCTCGGCTCCTTTGATTTAA 57.007 42.857 0.00 0.00 0.00 1.52
1912 2301 4.295141 TCCTCGGCTCCTTTGATTTAAA 57.705 40.909 0.00 0.00 0.00 1.52
1913 2302 4.261801 TCCTCGGCTCCTTTGATTTAAAG 58.738 43.478 0.00 0.00 44.35 1.85
1938 2327 9.634021 AGGAATTTTATAGGATTTCTGAAGGAC 57.366 33.333 0.00 0.00 0.00 3.85
1939 2328 9.634021 GGAATTTTATAGGATTTCTGAAGGACT 57.366 33.333 0.00 0.00 0.00 3.85
1942 2331 9.844257 ATTTTATAGGATTTCTGAAGGACTGAG 57.156 33.333 0.00 0.00 0.00 3.35
1943 2332 8.609617 TTTATAGGATTTCTGAAGGACTGAGA 57.390 34.615 0.00 0.00 0.00 3.27
1944 2333 8.789767 TTATAGGATTTCTGAAGGACTGAGAT 57.210 34.615 0.00 0.00 0.00 2.75
1945 2334 5.612725 AGGATTTCTGAAGGACTGAGATC 57.387 43.478 0.00 0.00 37.35 2.75
1946 2335 4.702831 GGATTTCTGAAGGACTGAGATCC 58.297 47.826 0.00 0.00 44.34 3.36
2028 2417 9.154847 GGAATTTTTCCTATGGATTCTTTTGTG 57.845 33.333 0.00 0.00 46.57 3.33
2029 2418 8.552083 AATTTTTCCTATGGATTCTTTTGTGC 57.448 30.769 0.00 0.00 0.00 4.57
2030 2419 6.916360 TTTTCCTATGGATTCTTTTGTGCT 57.084 33.333 0.00 0.00 0.00 4.40
2031 2420 8.415950 TTTTTCCTATGGATTCTTTTGTGCTA 57.584 30.769 0.00 0.00 0.00 3.49
2032 2421 7.391148 TTTCCTATGGATTCTTTTGTGCTAC 57.609 36.000 0.00 0.00 0.00 3.58
2033 2422 6.061022 TCCTATGGATTCTTTTGTGCTACA 57.939 37.500 0.00 0.00 0.00 2.74
2034 2423 6.662755 TCCTATGGATTCTTTTGTGCTACAT 58.337 36.000 0.00 0.00 0.00 2.29
2035 2424 7.118723 TCCTATGGATTCTTTTGTGCTACATT 58.881 34.615 0.00 0.00 0.00 2.71
2036 2425 7.615365 TCCTATGGATTCTTTTGTGCTACATTT 59.385 33.333 0.00 0.00 0.00 2.32
2037 2426 7.917505 CCTATGGATTCTTTTGTGCTACATTTC 59.082 37.037 0.00 0.00 0.00 2.17
2038 2427 6.647334 TGGATTCTTTTGTGCTACATTTCA 57.353 33.333 0.00 0.00 0.00 2.69
2039 2428 7.230849 TGGATTCTTTTGTGCTACATTTCAT 57.769 32.000 0.00 0.00 0.00 2.57
2040 2429 8.347004 TGGATTCTTTTGTGCTACATTTCATA 57.653 30.769 0.00 0.00 0.00 2.15
2041 2430 8.461222 TGGATTCTTTTGTGCTACATTTCATAG 58.539 33.333 0.00 0.00 0.00 2.23
2042 2431 7.917505 GGATTCTTTTGTGCTACATTTCATAGG 59.082 37.037 0.00 0.00 0.00 2.57
2043 2432 7.994425 TTCTTTTGTGCTACATTTCATAGGA 57.006 32.000 0.00 0.00 0.00 2.94
2044 2433 7.994425 TCTTTTGTGCTACATTTCATAGGAA 57.006 32.000 0.00 0.00 0.00 3.36
2045 2434 8.402798 TCTTTTGTGCTACATTTCATAGGAAA 57.597 30.769 4.85 4.85 46.36 3.13
2059 2448 8.964476 TTTCATAGGAAATCTAACATCCACTC 57.036 34.615 0.00 0.00 38.07 3.51
2060 2449 7.067496 TCATAGGAAATCTAACATCCACTCC 57.933 40.000 0.00 0.00 35.62 3.85
2061 2450 6.615316 TCATAGGAAATCTAACATCCACTCCA 59.385 38.462 0.00 0.00 35.62 3.86
2062 2451 5.779241 AGGAAATCTAACATCCACTCCAA 57.221 39.130 0.00 0.00 35.62 3.53
2063 2452 5.501156 AGGAAATCTAACATCCACTCCAAC 58.499 41.667 0.00 0.00 35.62 3.77
2064 2453 4.640647 GGAAATCTAACATCCACTCCAACC 59.359 45.833 0.00 0.00 33.30 3.77
2065 2454 5.501156 GAAATCTAACATCCACTCCAACCT 58.499 41.667 0.00 0.00 0.00 3.50
2066 2455 4.762289 ATCTAACATCCACTCCAACCTC 57.238 45.455 0.00 0.00 0.00 3.85
2067 2456 3.791320 TCTAACATCCACTCCAACCTCT 58.209 45.455 0.00 0.00 0.00 3.69
2068 2457 4.168101 TCTAACATCCACTCCAACCTCTT 58.832 43.478 0.00 0.00 0.00 2.85
2069 2458 3.884037 AACATCCACTCCAACCTCTTT 57.116 42.857 0.00 0.00 0.00 2.52
2070 2459 4.993705 AACATCCACTCCAACCTCTTTA 57.006 40.909 0.00 0.00 0.00 1.85
2071 2460 5.520748 AACATCCACTCCAACCTCTTTAT 57.479 39.130 0.00 0.00 0.00 1.40
2072 2461 6.636454 AACATCCACTCCAACCTCTTTATA 57.364 37.500 0.00 0.00 0.00 0.98
2073 2462 6.831664 ACATCCACTCCAACCTCTTTATAT 57.168 37.500 0.00 0.00 0.00 0.86
2074 2463 7.931015 ACATCCACTCCAACCTCTTTATATA 57.069 36.000 0.00 0.00 0.00 0.86
2075 2464 8.331931 ACATCCACTCCAACCTCTTTATATAA 57.668 34.615 0.00 0.00 0.00 0.98
2076 2465 8.949421 ACATCCACTCCAACCTCTTTATATAAT 58.051 33.333 0.00 0.00 0.00 1.28
2077 2466 9.799106 CATCCACTCCAACCTCTTTATATAATT 57.201 33.333 0.00 0.00 0.00 1.40
2079 2468 9.847224 TCCACTCCAACCTCTTTATATAATTTC 57.153 33.333 0.00 0.00 0.00 2.17
2080 2469 9.853177 CCACTCCAACCTCTTTATATAATTTCT 57.147 33.333 0.00 0.00 0.00 2.52
2096 2485 7.728847 ATAATTTCTTTGTTTTTCCTGTGGC 57.271 32.000 0.00 0.00 0.00 5.01
2097 2486 4.543590 TTTCTTTGTTTTTCCTGTGGCA 57.456 36.364 0.00 0.00 0.00 4.92
2098 2487 4.751767 TTCTTTGTTTTTCCTGTGGCAT 57.248 36.364 0.00 0.00 0.00 4.40
2099 2488 4.320608 TCTTTGTTTTTCCTGTGGCATC 57.679 40.909 0.00 0.00 0.00 3.91
2100 2489 3.703556 TCTTTGTTTTTCCTGTGGCATCA 59.296 39.130 0.00 0.00 0.00 3.07
2101 2490 4.161189 TCTTTGTTTTTCCTGTGGCATCAA 59.839 37.500 0.00 0.00 0.00 2.57
2102 2491 4.478206 TTGTTTTTCCTGTGGCATCAAA 57.522 36.364 0.00 0.00 0.00 2.69
2103 2492 3.791245 TGTTTTTCCTGTGGCATCAAAC 58.209 40.909 0.00 0.00 0.00 2.93
2104 2493 3.196469 TGTTTTTCCTGTGGCATCAAACA 59.804 39.130 0.00 0.00 31.84 2.83
2105 2494 4.141756 TGTTTTTCCTGTGGCATCAAACAT 60.142 37.500 0.00 0.00 29.87 2.71
2106 2495 4.686191 TTTTCCTGTGGCATCAAACATT 57.314 36.364 0.00 0.00 0.00 2.71
2107 2496 4.686191 TTTCCTGTGGCATCAAACATTT 57.314 36.364 0.00 0.00 0.00 2.32
2108 2497 5.798125 TTTCCTGTGGCATCAAACATTTA 57.202 34.783 0.00 0.00 0.00 1.40
2109 2498 5.999205 TTCCTGTGGCATCAAACATTTAT 57.001 34.783 0.00 0.00 0.00 1.40
2110 2499 5.999205 TCCTGTGGCATCAAACATTTATT 57.001 34.783 0.00 0.00 0.00 1.40
2111 2500 5.722263 TCCTGTGGCATCAAACATTTATTG 58.278 37.500 0.00 0.00 0.00 1.90
2112 2501 4.330620 CCTGTGGCATCAAACATTTATTGC 59.669 41.667 0.00 3.33 0.00 3.56
2113 2502 5.149973 TGTGGCATCAAACATTTATTGCT 57.850 34.783 0.00 0.00 31.63 3.91
2114 2503 6.278172 TGTGGCATCAAACATTTATTGCTA 57.722 33.333 0.00 3.05 31.63 3.49
2115 2504 6.695429 TGTGGCATCAAACATTTATTGCTAA 58.305 32.000 0.00 0.00 31.63 3.09
2116 2505 7.329499 TGTGGCATCAAACATTTATTGCTAAT 58.671 30.769 0.00 0.00 31.63 1.73
2117 2506 7.492020 TGTGGCATCAAACATTTATTGCTAATC 59.508 33.333 0.00 0.00 31.63 1.75
2118 2507 6.985645 TGGCATCAAACATTTATTGCTAATCC 59.014 34.615 9.32 0.00 31.63 3.01
2119 2508 7.147689 TGGCATCAAACATTTATTGCTAATCCT 60.148 33.333 9.32 0.00 31.63 3.24
2120 2509 8.359642 GGCATCAAACATTTATTGCTAATCCTA 58.640 33.333 9.32 0.00 31.63 2.94
2121 2510 9.918630 GCATCAAACATTTATTGCTAATCCTAT 57.081 29.630 4.34 0.00 0.00 2.57
2136 2525 9.681062 TGCTAATCCTATATAATTTAAGTGGGC 57.319 33.333 0.00 0.00 0.00 5.36
2137 2526 9.681062 GCTAATCCTATATAATTTAAGTGGGCA 57.319 33.333 0.00 0.00 0.00 5.36
2141 2530 9.686683 ATCCTATATAATTTAAGTGGGCATGTC 57.313 33.333 0.00 0.00 0.00 3.06
2142 2531 8.664992 TCCTATATAATTTAAGTGGGCATGTCA 58.335 33.333 0.00 0.00 0.00 3.58
2143 2532 8.730680 CCTATATAATTTAAGTGGGCATGTCAC 58.269 37.037 0.00 6.43 35.51 3.67
2144 2533 9.507329 CTATATAATTTAAGTGGGCATGTCACT 57.493 33.333 15.03 15.03 46.22 3.41
2149 2538 1.609208 AGTGGGCATGTCACTTCAAC 58.391 50.000 15.03 0.00 42.17 3.18
2150 2539 0.598065 GTGGGCATGTCACTTCAACC 59.402 55.000 0.00 0.00 32.78 3.77
2151 2540 0.539438 TGGGCATGTCACTTCAACCC 60.539 55.000 0.00 0.00 37.90 4.11
2152 2541 0.251341 GGGCATGTCACTTCAACCCT 60.251 55.000 0.00 0.00 35.90 4.34
2153 2542 1.004277 GGGCATGTCACTTCAACCCTA 59.996 52.381 0.00 0.00 35.90 3.53
2154 2543 2.357154 GGGCATGTCACTTCAACCCTAT 60.357 50.000 0.00 0.00 35.90 2.57
2155 2544 2.684881 GGCATGTCACTTCAACCCTATG 59.315 50.000 0.00 0.00 0.00 2.23
2156 2545 2.098117 GCATGTCACTTCAACCCTATGC 59.902 50.000 0.00 0.00 33.83 3.14
2157 2546 3.614092 CATGTCACTTCAACCCTATGCT 58.386 45.455 0.00 0.00 0.00 3.79
2158 2547 3.788227 TGTCACTTCAACCCTATGCTT 57.212 42.857 0.00 0.00 0.00 3.91
2159 2548 4.098914 TGTCACTTCAACCCTATGCTTT 57.901 40.909 0.00 0.00 0.00 3.51
2160 2549 4.469657 TGTCACTTCAACCCTATGCTTTT 58.530 39.130 0.00 0.00 0.00 2.27
2161 2550 4.518970 TGTCACTTCAACCCTATGCTTTTC 59.481 41.667 0.00 0.00 0.00 2.29
2162 2551 4.079253 TCACTTCAACCCTATGCTTTTCC 58.921 43.478 0.00 0.00 0.00 3.13
2163 2552 4.082125 CACTTCAACCCTATGCTTTTCCT 58.918 43.478 0.00 0.00 0.00 3.36
2164 2553 5.013704 TCACTTCAACCCTATGCTTTTCCTA 59.986 40.000 0.00 0.00 0.00 2.94
2165 2554 5.888161 CACTTCAACCCTATGCTTTTCCTAT 59.112 40.000 0.00 0.00 0.00 2.57
2166 2555 6.378280 CACTTCAACCCTATGCTTTTCCTATT 59.622 38.462 0.00 0.00 0.00 1.73
2167 2556 6.378280 ACTTCAACCCTATGCTTTTCCTATTG 59.622 38.462 0.00 0.00 0.00 1.90
2168 2557 4.644685 TCAACCCTATGCTTTTCCTATTGC 59.355 41.667 0.00 0.00 0.00 3.56
2169 2558 4.526438 ACCCTATGCTTTTCCTATTGCT 57.474 40.909 0.00 0.00 0.00 3.91
2170 2559 5.646692 ACCCTATGCTTTTCCTATTGCTA 57.353 39.130 0.00 0.00 0.00 3.49
2171 2560 5.377478 ACCCTATGCTTTTCCTATTGCTAC 58.623 41.667 0.00 0.00 0.00 3.58
2172 2561 4.452455 CCCTATGCTTTTCCTATTGCTACG 59.548 45.833 0.00 0.00 0.00 3.51
2173 2562 5.057149 CCTATGCTTTTCCTATTGCTACGT 58.943 41.667 0.00 0.00 0.00 3.57
2174 2563 5.527582 CCTATGCTTTTCCTATTGCTACGTT 59.472 40.000 0.00 0.00 0.00 3.99
2175 2564 5.897377 ATGCTTTTCCTATTGCTACGTTT 57.103 34.783 0.00 0.00 0.00 3.60
2176 2565 5.699097 TGCTTTTCCTATTGCTACGTTTT 57.301 34.783 0.00 0.00 0.00 2.43
2177 2566 5.695818 TGCTTTTCCTATTGCTACGTTTTC 58.304 37.500 0.00 0.00 0.00 2.29
2178 2567 5.239744 TGCTTTTCCTATTGCTACGTTTTCA 59.760 36.000 0.00 0.00 0.00 2.69
2179 2568 6.146898 GCTTTTCCTATTGCTACGTTTTCAA 58.853 36.000 0.00 0.00 0.00 2.69
2180 2569 6.639279 GCTTTTCCTATTGCTACGTTTTCAAA 59.361 34.615 0.00 0.00 0.00 2.69
2181 2570 7.168469 GCTTTTCCTATTGCTACGTTTTCAAAA 59.832 33.333 0.00 0.00 0.00 2.44
2182 2571 9.191995 CTTTTCCTATTGCTACGTTTTCAAAAT 57.808 29.630 0.00 0.00 0.00 1.82
2183 2572 8.736751 TTTCCTATTGCTACGTTTTCAAAATC 57.263 30.769 0.00 0.00 0.00 2.17
2184 2573 6.848451 TCCTATTGCTACGTTTTCAAAATCC 58.152 36.000 0.00 0.00 0.00 3.01
2185 2574 6.657541 TCCTATTGCTACGTTTTCAAAATCCT 59.342 34.615 0.00 0.00 0.00 3.24
2186 2575 7.825270 TCCTATTGCTACGTTTTCAAAATCCTA 59.175 33.333 0.00 0.00 0.00 2.94
2187 2576 7.908601 CCTATTGCTACGTTTTCAAAATCCTAC 59.091 37.037 0.00 0.00 0.00 3.18
2188 2577 5.272167 TGCTACGTTTTCAAAATCCTACG 57.728 39.130 0.00 0.00 35.34 3.51
2189 2578 4.989797 TGCTACGTTTTCAAAATCCTACGA 59.010 37.500 0.00 0.00 33.60 3.43
2190 2579 5.466058 TGCTACGTTTTCAAAATCCTACGAA 59.534 36.000 0.00 0.00 33.60 3.85
2191 2580 6.148150 TGCTACGTTTTCAAAATCCTACGAAT 59.852 34.615 0.00 0.00 33.60 3.34
2192 2581 6.681599 GCTACGTTTTCAAAATCCTACGAATC 59.318 38.462 0.00 0.00 33.60 2.52
2193 2582 6.548441 ACGTTTTCAAAATCCTACGAATCA 57.452 33.333 0.00 0.00 33.60 2.57
2194 2583 6.961576 ACGTTTTCAAAATCCTACGAATCAA 58.038 32.000 0.00 0.00 33.60 2.57
2195 2584 7.075741 ACGTTTTCAAAATCCTACGAATCAAG 58.924 34.615 0.00 0.00 33.60 3.02
2196 2585 6.523201 CGTTTTCAAAATCCTACGAATCAAGG 59.477 38.462 0.00 0.00 0.00 3.61
2197 2586 7.572353 CGTTTTCAAAATCCTACGAATCAAGGA 60.572 37.037 4.10 4.10 45.76 3.36
2198 2587 6.985188 TTCAAAATCCTACGAATCAAGGAG 57.015 37.500 7.32 0.00 44.92 3.69
2199 2588 5.428253 TCAAAATCCTACGAATCAAGGAGG 58.572 41.667 7.32 0.00 44.92 4.30
2200 2589 3.477210 AATCCTACGAATCAAGGAGGC 57.523 47.619 7.32 0.00 44.92 4.70
2201 2590 1.120530 TCCTACGAATCAAGGAGGCC 58.879 55.000 0.00 0.00 36.97 5.19
2202 2591 0.106894 CCTACGAATCAAGGAGGCCC 59.893 60.000 0.00 0.00 34.58 5.80
2203 2592 5.883583 ATCCTACGAATCAAGGAGGCCCT 62.884 52.174 0.00 0.00 44.92 5.19
2204 2593 0.830648 TACGAATCAAGGAGGCCCTG 59.169 55.000 0.00 0.00 43.48 4.45
2205 2594 0.909610 ACGAATCAAGGAGGCCCTGA 60.910 55.000 0.00 0.00 43.48 3.86
2206 2595 0.253044 CGAATCAAGGAGGCCCTGAA 59.747 55.000 0.00 0.00 43.48 3.02
2207 2596 1.340017 CGAATCAAGGAGGCCCTGAAA 60.340 52.381 0.00 0.00 43.48 2.69
2208 2597 2.684927 CGAATCAAGGAGGCCCTGAAAT 60.685 50.000 0.00 0.00 43.48 2.17
2209 2598 3.369175 GAATCAAGGAGGCCCTGAAATT 58.631 45.455 0.00 0.00 43.48 1.82
2210 2599 2.514458 TCAAGGAGGCCCTGAAATTC 57.486 50.000 0.00 0.00 43.48 2.17
2211 2600 1.005924 TCAAGGAGGCCCTGAAATTCC 59.994 52.381 0.00 0.00 43.48 3.01
2212 2601 1.006400 CAAGGAGGCCCTGAAATTCCT 59.994 52.381 0.00 0.00 43.48 3.36
2213 2602 1.387119 AGGAGGCCCTGAAATTCCTT 58.613 50.000 0.00 0.00 42.42 3.36
2214 2603 1.286257 AGGAGGCCCTGAAATTCCTTC 59.714 52.381 0.00 0.00 42.42 3.46
2215 2604 1.005924 GGAGGCCCTGAAATTCCTTCA 59.994 52.381 0.00 0.00 41.93 3.02
2216 2605 2.095461 GAGGCCCTGAAATTCCTTCAC 58.905 52.381 0.00 0.00 39.20 3.18
2217 2606 0.811281 GGCCCTGAAATTCCTTCACG 59.189 55.000 0.00 0.00 39.20 4.35
2218 2607 0.811281 GCCCTGAAATTCCTTCACGG 59.189 55.000 0.00 0.00 41.01 4.94
2219 2608 1.613255 GCCCTGAAATTCCTTCACGGA 60.613 52.381 6.68 0.00 40.71 4.69
2220 2609 2.945890 GCCCTGAAATTCCTTCACGGAT 60.946 50.000 6.68 0.00 40.71 4.18
2221 2610 2.684881 CCCTGAAATTCCTTCACGGATG 59.315 50.000 0.00 0.00 40.71 3.51
2222 2611 2.684881 CCTGAAATTCCTTCACGGATGG 59.315 50.000 0.00 0.00 42.70 3.51
2223 2612 3.347216 CTGAAATTCCTTCACGGATGGT 58.653 45.455 0.00 0.00 42.70 3.55
2224 2613 3.758554 CTGAAATTCCTTCACGGATGGTT 59.241 43.478 0.00 0.00 42.70 3.67
2225 2614 4.912586 TGAAATTCCTTCACGGATGGTTA 58.087 39.130 0.00 0.00 42.70 2.85
2226 2615 4.941263 TGAAATTCCTTCACGGATGGTTAG 59.059 41.667 0.00 0.00 42.70 2.34
2227 2616 2.396590 TTCCTTCACGGATGGTTAGC 57.603 50.000 0.00 0.00 42.70 3.09
2228 2617 0.174845 TCCTTCACGGATGGTTAGCG 59.825 55.000 0.00 0.00 36.69 4.26
2229 2618 0.108329 CCTTCACGGATGGTTAGCGT 60.108 55.000 0.00 0.00 33.16 5.07
2230 2619 1.674817 CCTTCACGGATGGTTAGCGTT 60.675 52.381 0.00 0.00 33.16 4.84
2231 2620 1.659098 CTTCACGGATGGTTAGCGTTC 59.341 52.381 0.00 0.00 0.00 3.95
2232 2621 0.892755 TCACGGATGGTTAGCGTTCT 59.107 50.000 0.00 0.00 0.00 3.01
2233 2622 2.093890 TCACGGATGGTTAGCGTTCTA 58.906 47.619 0.00 0.00 0.00 2.10
2234 2623 2.691526 TCACGGATGGTTAGCGTTCTAT 59.308 45.455 0.00 0.00 0.00 1.98
2235 2624 2.794910 CACGGATGGTTAGCGTTCTATG 59.205 50.000 0.00 0.00 0.00 2.23
2236 2625 2.691526 ACGGATGGTTAGCGTTCTATGA 59.308 45.455 0.00 0.00 0.00 2.15
2237 2626 3.321111 ACGGATGGTTAGCGTTCTATGAT 59.679 43.478 0.00 0.00 0.00 2.45
2238 2627 4.202223 ACGGATGGTTAGCGTTCTATGATT 60.202 41.667 0.00 0.00 0.00 2.57
2239 2628 5.010314 ACGGATGGTTAGCGTTCTATGATTA 59.990 40.000 0.00 0.00 0.00 1.75
2240 2629 5.573282 CGGATGGTTAGCGTTCTATGATTAG 59.427 44.000 0.00 0.00 0.00 1.73
2241 2630 6.456501 GGATGGTTAGCGTTCTATGATTAGT 58.543 40.000 0.00 0.00 0.00 2.24
2242 2631 7.574404 CGGATGGTTAGCGTTCTATGATTAGTA 60.574 40.741 0.00 0.00 0.00 1.82
2243 2632 7.541437 GGATGGTTAGCGTTCTATGATTAGTAC 59.459 40.741 0.00 0.00 0.00 2.73
2244 2633 6.432936 TGGTTAGCGTTCTATGATTAGTACG 58.567 40.000 7.53 7.53 46.13 3.67
2268 2660 3.380479 ACTCGTGAAGACCGATGAAAA 57.620 42.857 0.00 0.00 33.27 2.29
2269 2661 3.926616 ACTCGTGAAGACCGATGAAAAT 58.073 40.909 0.00 0.00 33.27 1.82
2270 2662 3.679980 ACTCGTGAAGACCGATGAAAATG 59.320 43.478 0.00 0.00 33.27 2.32
2271 2663 2.415168 TCGTGAAGACCGATGAAAATGC 59.585 45.455 0.00 0.00 0.00 3.56
2272 2664 2.159430 CGTGAAGACCGATGAAAATGCA 59.841 45.455 0.00 0.00 0.00 3.96
2472 2868 0.798776 CACCAGTGCTTCCGTCATTC 59.201 55.000 0.00 0.00 0.00 2.67
2474 2870 0.670546 CCAGTGCTTCCGTCATTCGT 60.671 55.000 0.00 0.00 37.94 3.85
2478 2874 0.389817 TGCTTCCGTCATTCGTCCAG 60.390 55.000 0.00 0.00 37.94 3.86
2499 2895 2.038295 GGATCCTCTATGGCCAGAGTTG 59.962 54.545 26.07 18.94 40.47 3.16
2508 2904 3.257933 CCAGAGTTGGCACGAAGC 58.742 61.111 0.00 0.00 44.65 3.86
2517 2913 2.669569 GCACGAAGCAAGAGCCCA 60.670 61.111 0.00 0.00 44.79 5.36
2518 2914 2.684843 GCACGAAGCAAGAGCCCAG 61.685 63.158 0.00 0.00 44.79 4.45
2519 2915 1.004560 CACGAAGCAAGAGCCCAGA 60.005 57.895 0.00 0.00 43.56 3.86
2520 2916 1.004440 ACGAAGCAAGAGCCCAGAC 60.004 57.895 0.00 0.00 43.56 3.51
2521 2917 1.294780 CGAAGCAAGAGCCCAGACT 59.705 57.895 0.00 0.00 43.56 3.24
2522 2918 0.532573 CGAAGCAAGAGCCCAGACTA 59.467 55.000 0.00 0.00 43.56 2.59
2523 2919 1.137872 CGAAGCAAGAGCCCAGACTAT 59.862 52.381 0.00 0.00 43.56 2.12
2524 2920 2.362397 CGAAGCAAGAGCCCAGACTATA 59.638 50.000 0.00 0.00 43.56 1.31
2525 2921 3.006323 CGAAGCAAGAGCCCAGACTATAT 59.994 47.826 0.00 0.00 43.56 0.86
2526 2922 4.502259 CGAAGCAAGAGCCCAGACTATATT 60.502 45.833 0.00 0.00 43.56 1.28
2527 2923 5.372373 GAAGCAAGAGCCCAGACTATATTT 58.628 41.667 0.00 0.00 43.56 1.40
2528 2924 4.712476 AGCAAGAGCCCAGACTATATTTG 58.288 43.478 0.00 0.00 43.56 2.32
2529 2925 4.410228 AGCAAGAGCCCAGACTATATTTGA 59.590 41.667 0.00 0.00 43.56 2.69
2530 2926 5.072872 AGCAAGAGCCCAGACTATATTTGAT 59.927 40.000 0.00 0.00 43.56 2.57
2531 2927 5.411053 GCAAGAGCCCAGACTATATTTGATC 59.589 44.000 0.00 0.00 33.58 2.92
2532 2928 6.528321 CAAGAGCCCAGACTATATTTGATCA 58.472 40.000 0.00 0.00 0.00 2.92
2533 2929 6.949117 AGAGCCCAGACTATATTTGATCAT 57.051 37.500 0.00 0.00 0.00 2.45
2534 2930 7.327064 AGAGCCCAGACTATATTTGATCATT 57.673 36.000 0.00 0.00 0.00 2.57
2535 2931 7.753630 AGAGCCCAGACTATATTTGATCATTT 58.246 34.615 0.00 0.00 0.00 2.32
2536 2932 7.664731 AGAGCCCAGACTATATTTGATCATTTG 59.335 37.037 0.00 0.00 0.00 2.32
2537 2933 7.520798 AGCCCAGACTATATTTGATCATTTGA 58.479 34.615 0.00 0.00 0.00 2.69
2538 2934 8.168725 AGCCCAGACTATATTTGATCATTTGAT 58.831 33.333 0.00 0.00 37.51 2.57
2539 2935 9.453572 GCCCAGACTATATTTGATCATTTGATA 57.546 33.333 0.00 0.00 34.37 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.306213 TCGCGACCATTTATTCAATTTGTTTA 58.694 30.769 3.71 0.00 0.00 2.01
33 34 5.704888 TCGCGACCATTTATTCAATTTGTT 58.295 33.333 3.71 0.00 0.00 2.83
34 35 5.303747 TCGCGACCATTTATTCAATTTGT 57.696 34.783 3.71 0.00 0.00 2.83
35 36 5.173673 CCATCGCGACCATTTATTCAATTTG 59.826 40.000 12.93 0.00 0.00 2.32
39 40 3.536570 TCCATCGCGACCATTTATTCAA 58.463 40.909 12.93 0.00 0.00 2.69
40 41 3.186702 TCCATCGCGACCATTTATTCA 57.813 42.857 12.93 0.00 0.00 2.57
41 42 5.856126 TTATCCATCGCGACCATTTATTC 57.144 39.130 12.93 0.00 0.00 1.75
44 45 5.220892 GGTTTTTATCCATCGCGACCATTTA 60.221 40.000 12.93 0.00 0.00 1.40
56 57 7.976414 TCATTCCATTGAGGTTTTTATCCAT 57.024 32.000 0.00 0.00 39.02 3.41
61 62 9.487790 GATTGTTTCATTCCATTGAGGTTTTTA 57.512 29.630 0.00 0.00 39.02 1.52
63 64 7.738847 AGATTGTTTCATTCCATTGAGGTTTT 58.261 30.769 0.00 0.00 39.02 2.43
67 68 7.121759 ACAGTAGATTGTTTCATTCCATTGAGG 59.878 37.037 0.00 0.00 39.47 3.86
72 73 8.464404 CATCAACAGTAGATTGTTTCATTCCAT 58.536 33.333 0.00 0.00 39.17 3.41
73 74 7.448161 ACATCAACAGTAGATTGTTTCATTCCA 59.552 33.333 0.00 0.00 39.17 3.53
77 78 6.942005 TCCACATCAACAGTAGATTGTTTCAT 59.058 34.615 0.00 0.00 39.17 2.57
89 90 4.557296 CGAATTTGCTTCCACATCAACAGT 60.557 41.667 0.00 0.00 0.00 3.55
98 99 2.356135 TCCTAGCGAATTTGCTTCCAC 58.644 47.619 24.97 0.00 44.46 4.02
110 111 6.112734 TCATTTTGCTTCTATTTCCTAGCGA 58.887 36.000 0.00 0.00 36.43 4.93
138 139 8.268850 TCTATTTCCTAGCACTTGAACAATTC 57.731 34.615 0.00 0.00 0.00 2.17
139 140 8.635765 TTCTATTTCCTAGCACTTGAACAATT 57.364 30.769 0.00 0.00 0.00 2.32
140 141 7.148171 GCTTCTATTTCCTAGCACTTGAACAAT 60.148 37.037 0.00 0.00 33.88 2.71
141 142 6.149474 GCTTCTATTTCCTAGCACTTGAACAA 59.851 38.462 0.00 0.00 33.88 2.83
142 143 5.643777 GCTTCTATTTCCTAGCACTTGAACA 59.356 40.000 0.00 0.00 33.88 3.18
143 144 5.643777 TGCTTCTATTTCCTAGCACTTGAAC 59.356 40.000 0.00 0.00 38.61 3.18
163 164 7.093377 TGGGAAGCAGATACATTTATTTTGCTT 60.093 33.333 17.44 17.44 43.94 3.91
164 165 6.380846 TGGGAAGCAGATACATTTATTTTGCT 59.619 34.615 6.18 6.18 39.08 3.91
165 166 6.572519 TGGGAAGCAGATACATTTATTTTGC 58.427 36.000 0.00 2.69 32.63 3.68
168 169 7.067494 GTGACTGGGAAGCAGATACATTTATTT 59.933 37.037 0.00 0.00 0.00 1.40
170 171 6.058183 GTGACTGGGAAGCAGATACATTTAT 58.942 40.000 0.00 0.00 0.00 1.40
171 172 5.045942 TGTGACTGGGAAGCAGATACATTTA 60.046 40.000 0.00 0.00 0.00 1.40
172 173 4.263462 TGTGACTGGGAAGCAGATACATTT 60.263 41.667 0.00 0.00 0.00 2.32
173 174 3.264193 TGTGACTGGGAAGCAGATACATT 59.736 43.478 0.00 0.00 0.00 2.71
176 177 3.334583 TTGTGACTGGGAAGCAGATAC 57.665 47.619 0.00 0.00 0.00 2.24
177 178 4.365514 TTTTGTGACTGGGAAGCAGATA 57.634 40.909 0.00 0.00 0.00 1.98
178 179 2.957402 TTTGTGACTGGGAAGCAGAT 57.043 45.000 0.00 0.00 0.00 2.90
179 180 2.727123 TTTTGTGACTGGGAAGCAGA 57.273 45.000 0.00 0.00 0.00 4.26
228 230 7.719871 ATCTGCACTAAACTAGGAGAAACTA 57.280 36.000 0.00 0.00 0.00 2.24
236 238 6.072508 TGCTTTGAAATCTGCACTAAACTAGG 60.073 38.462 0.00 0.00 0.00 3.02
238 240 6.875948 TGCTTTGAAATCTGCACTAAACTA 57.124 33.333 0.00 0.00 0.00 2.24
258 260 0.458543 CTGCTTCATCCGTACGTGCT 60.459 55.000 15.21 0.00 0.00 4.40
260 262 1.990799 TTCTGCTTCATCCGTACGTG 58.009 50.000 15.21 7.04 0.00 4.49
261 263 2.607187 CTTTCTGCTTCATCCGTACGT 58.393 47.619 15.21 0.00 0.00 3.57
262 264 1.927174 CCTTTCTGCTTCATCCGTACG 59.073 52.381 8.69 8.69 0.00 3.67
274 276 1.405661 CCGTAACCTCCTCCTTTCTGC 60.406 57.143 0.00 0.00 0.00 4.26
278 280 2.242882 TAGCCGTAACCTCCTCCTTT 57.757 50.000 0.00 0.00 0.00 3.11
285 287 3.617263 CACATCACTTTAGCCGTAACCTC 59.383 47.826 0.00 0.00 0.00 3.85
287 289 3.592059 TCACATCACTTTAGCCGTAACC 58.408 45.455 0.00 0.00 0.00 2.85
288 290 4.630069 ACATCACATCACTTTAGCCGTAAC 59.370 41.667 0.00 0.00 0.00 2.50
293 295 4.770795 ACCTACATCACATCACTTTAGCC 58.229 43.478 0.00 0.00 0.00 3.93
300 302 3.066900 ACGCTAGACCTACATCACATCAC 59.933 47.826 0.00 0.00 0.00 3.06
301 303 3.066760 CACGCTAGACCTACATCACATCA 59.933 47.826 0.00 0.00 0.00 3.07
302 304 3.315470 TCACGCTAGACCTACATCACATC 59.685 47.826 0.00 0.00 0.00 3.06
303 305 3.288092 TCACGCTAGACCTACATCACAT 58.712 45.455 0.00 0.00 0.00 3.21
304 306 2.718563 TCACGCTAGACCTACATCACA 58.281 47.619 0.00 0.00 0.00 3.58
331 333 1.425066 TGTTTCCCATCAACTGCTCCT 59.575 47.619 0.00 0.00 0.00 3.69
343 345 5.473846 TGCACTAATTACGATTTGTTTCCCA 59.526 36.000 0.00 0.00 30.47 4.37
352 354 4.214980 GCATGCTGCACTAATTACGATT 57.785 40.909 11.37 0.00 44.26 3.34
368 370 6.258068 CCTAGGTAGTTAGTTAGTTTGCATGC 59.742 42.308 11.82 11.82 0.00 4.06
375 377 5.954752 GGTGGACCTAGGTAGTTAGTTAGTT 59.045 44.000 16.29 0.00 0.00 2.24
376 378 5.254972 AGGTGGACCTAGGTAGTTAGTTAGT 59.745 44.000 16.29 0.00 46.48 2.24
377 379 5.764432 AGGTGGACCTAGGTAGTTAGTTAG 58.236 45.833 16.29 0.00 46.48 2.34
378 380 5.803463 AGGTGGACCTAGGTAGTTAGTTA 57.197 43.478 16.29 0.00 46.48 2.24
394 396 1.001974 CCGTGTGATTGAAGAGGTGGA 59.998 52.381 0.00 0.00 0.00 4.02
416 418 1.064505 CGTTACATTGATGCAGCCTGG 59.935 52.381 0.00 0.00 0.00 4.45
431 433 2.422832 CAGACTCCTAGTCCACCGTTAC 59.577 54.545 3.49 0.00 46.18 2.50
493 842 1.078759 TGCGTGTTTTGTTTTGGGCG 61.079 50.000 0.00 0.00 0.00 6.13
494 843 0.371989 GTGCGTGTTTTGTTTTGGGC 59.628 50.000 0.00 0.00 0.00 5.36
497 846 3.089982 GCAATGTGCGTGTTTTGTTTTG 58.910 40.909 0.00 0.00 31.71 2.44
504 853 2.015736 TTTTGGCAATGTGCGTGTTT 57.984 40.000 0.00 0.00 46.21 2.83
505 854 1.865970 CATTTTGGCAATGTGCGTGTT 59.134 42.857 0.00 0.00 46.21 3.32
535 884 2.740714 GATCGGTCAAGGCGTGTGC 61.741 63.158 0.00 0.00 41.71 4.57
536 885 2.444624 CGATCGGTCAAGGCGTGTG 61.445 63.158 7.38 0.00 0.00 3.82
537 886 2.126071 CGATCGGTCAAGGCGTGT 60.126 61.111 7.38 0.00 0.00 4.49
538 887 1.736645 AACGATCGGTCAAGGCGTG 60.737 57.895 20.98 0.00 35.16 5.34
605 954 0.596577 TGTTCTCGAAGGGACTGACG 59.403 55.000 0.00 0.00 40.86 4.35
631 980 4.702081 AGTCGCGGTCGTGTGAGC 62.702 66.667 6.13 0.00 39.25 4.26
632 981 2.459421 AAGAGTCGCGGTCGTGTGAG 62.459 60.000 6.13 0.00 36.96 3.51
633 982 2.453773 GAAGAGTCGCGGTCGTGTGA 62.454 60.000 6.13 0.00 36.96 3.58
634 983 2.050351 AAGAGTCGCGGTCGTGTG 60.050 61.111 6.13 0.00 36.96 3.82
635 984 2.254651 GAAGAGTCGCGGTCGTGT 59.745 61.111 6.13 0.00 36.96 4.49
703 1052 1.464734 AGATCCGTGACACAGATCGT 58.535 50.000 20.83 10.48 41.06 3.73
710 1059 0.589229 CGAGCGTAGATCCGTGACAC 60.589 60.000 0.00 0.00 41.58 3.67
789 1139 3.574074 GAGGAAGGCAAGGCAGGCA 62.574 63.158 0.00 0.00 36.37 4.75
790 1140 2.753446 GAGGAAGGCAAGGCAGGC 60.753 66.667 0.00 0.00 0.00 4.85
791 1141 2.044551 GGAGGAAGGCAAGGCAGG 60.045 66.667 0.00 0.00 0.00 4.85
792 1142 2.044551 GGGAGGAAGGCAAGGCAG 60.045 66.667 0.00 0.00 0.00 4.85
793 1143 3.661648 GGGGAGGAAGGCAAGGCA 61.662 66.667 0.00 0.00 0.00 4.75
855 1205 0.741221 GCATTGACGAGGTGGAGACC 60.741 60.000 0.00 0.00 43.52 3.85
856 1206 0.247736 AGCATTGACGAGGTGGAGAC 59.752 55.000 0.00 0.00 0.00 3.36
857 1207 0.532573 GAGCATTGACGAGGTGGAGA 59.467 55.000 0.00 0.00 0.00 3.71
858 1208 0.460987 GGAGCATTGACGAGGTGGAG 60.461 60.000 0.00 0.00 0.00 3.86
859 1209 1.596934 GGAGCATTGACGAGGTGGA 59.403 57.895 0.00 0.00 0.00 4.02
860 1210 1.450312 GGGAGCATTGACGAGGTGG 60.450 63.158 0.00 0.00 0.00 4.61
998 1350 2.657944 CGAGCGAGAGAGGCATGC 60.658 66.667 9.90 9.90 0.00 4.06
1069 1421 4.820744 GTCCATGCCCATGCCCGT 62.821 66.667 2.75 0.00 37.49 5.28
1073 1425 2.751436 ACGTGTCCATGCCCATGC 60.751 61.111 2.75 0.00 37.49 4.06
1209 1579 2.442458 GTCGGGGGAGAGGAGGAC 60.442 72.222 0.00 0.00 0.00 3.85
1531 1904 0.254178 AGCATTCACCTCGCCTCATT 59.746 50.000 0.00 0.00 0.00 2.57
1535 1908 1.141881 CGTAGCATTCACCTCGCCT 59.858 57.895 0.00 0.00 0.00 5.52
1539 1912 0.736325 ACGCACGTAGCATTCACCTC 60.736 55.000 9.95 0.00 46.13 3.85
1556 1929 1.194896 GATCGGCGAGAGAACGAACG 61.195 60.000 17.22 0.00 43.19 3.95
1557 1930 1.194896 CGATCGGCGAGAGAACGAAC 61.195 60.000 17.22 0.00 43.19 3.95
1558 1931 1.062047 CGATCGGCGAGAGAACGAA 59.938 57.895 17.22 0.00 43.19 3.85
1559 1932 1.642037 AACGATCGGCGAGAGAACGA 61.642 55.000 20.98 0.00 44.57 3.85
1575 1948 2.223479 GCAGCTAAGAGAGAGAGGAACG 60.223 54.545 0.00 0.00 0.00 3.95
1588 1961 2.069273 AGCTAACAACACGCAGCTAAG 58.931 47.619 0.00 0.00 42.41 2.18
1589 1962 2.163818 AGCTAACAACACGCAGCTAA 57.836 45.000 0.00 0.00 42.41 3.09
1596 1969 6.617953 GCCTAAACTAAGAAGCTAACAACACG 60.618 42.308 0.00 0.00 0.00 4.49
1622 1995 6.153340 ACAGAATGGGAATTCAATGTTTCGAT 59.847 34.615 7.93 0.00 43.62 3.59
1623 1996 5.476599 ACAGAATGGGAATTCAATGTTTCGA 59.523 36.000 7.93 0.00 43.62 3.71
1624 1997 5.713025 ACAGAATGGGAATTCAATGTTTCG 58.287 37.500 7.93 3.18 43.62 3.46
1625 1998 7.545615 GGTTACAGAATGGGAATTCAATGTTTC 59.454 37.037 7.93 3.27 43.62 2.78
1626 1999 7.386059 GGTTACAGAATGGGAATTCAATGTTT 58.614 34.615 7.93 0.00 43.62 2.83
1627 2000 6.350110 CGGTTACAGAATGGGAATTCAATGTT 60.350 38.462 7.93 0.00 43.62 2.71
1628 2001 5.125417 CGGTTACAGAATGGGAATTCAATGT 59.875 40.000 7.93 5.00 43.62 2.71
1629 2002 5.125417 ACGGTTACAGAATGGGAATTCAATG 59.875 40.000 7.93 0.00 43.62 2.82
1630 2003 5.261216 ACGGTTACAGAATGGGAATTCAAT 58.739 37.500 7.93 0.00 43.62 2.57
1631 2004 4.658063 ACGGTTACAGAATGGGAATTCAA 58.342 39.130 7.93 0.00 43.62 2.69
1632 2005 4.295141 ACGGTTACAGAATGGGAATTCA 57.705 40.909 7.93 0.00 43.62 2.57
1702 2078 1.069091 GCCCGAAGCTAGAGACGATAC 60.069 57.143 0.00 0.00 38.99 2.24
1703 2079 1.236628 GCCCGAAGCTAGAGACGATA 58.763 55.000 0.00 0.00 38.99 2.92
1704 2080 1.787057 CGCCCGAAGCTAGAGACGAT 61.787 60.000 0.00 0.00 40.39 3.73
1705 2081 2.470362 CGCCCGAAGCTAGAGACGA 61.470 63.158 0.00 0.00 40.39 4.20
1706 2082 1.989966 TTCGCCCGAAGCTAGAGACG 61.990 60.000 0.00 0.00 40.39 4.18
1707 2083 0.248702 CTTCGCCCGAAGCTAGAGAC 60.249 60.000 16.27 0.00 43.95 3.36
1708 2084 2.107705 CTTCGCCCGAAGCTAGAGA 58.892 57.895 16.27 0.00 43.95 3.10
1709 2085 4.719997 CTTCGCCCGAAGCTAGAG 57.280 61.111 16.27 0.00 43.95 2.43
1716 2092 0.035820 AAATAGCACCTTCGCCCGAA 60.036 50.000 2.92 2.92 0.00 4.30
1717 2093 0.035820 AAAATAGCACCTTCGCCCGA 60.036 50.000 0.00 0.00 0.00 5.14
1718 2094 0.098728 CAAAATAGCACCTTCGCCCG 59.901 55.000 0.00 0.00 0.00 6.13
1719 2095 0.455815 CCAAAATAGCACCTTCGCCC 59.544 55.000 0.00 0.00 0.00 6.13
1720 2096 1.135402 CACCAAAATAGCACCTTCGCC 60.135 52.381 0.00 0.00 0.00 5.54
1721 2097 1.810151 TCACCAAAATAGCACCTTCGC 59.190 47.619 0.00 0.00 0.00 4.70
1722 2098 3.941483 AGATCACCAAAATAGCACCTTCG 59.059 43.478 0.00 0.00 0.00 3.79
1723 2099 5.189180 AGAGATCACCAAAATAGCACCTTC 58.811 41.667 0.00 0.00 0.00 3.46
1724 2100 5.045286 AGAGAGATCACCAAAATAGCACCTT 60.045 40.000 0.00 0.00 0.00 3.50
1725 2101 4.472833 AGAGAGATCACCAAAATAGCACCT 59.527 41.667 0.00 0.00 0.00 4.00
1726 2102 4.775236 AGAGAGATCACCAAAATAGCACC 58.225 43.478 0.00 0.00 0.00 5.01
1831 2220 3.973206 TCTCATTACCGGTTCACACAT 57.027 42.857 15.04 0.00 0.00 3.21
1873 2262 5.859114 CCGAGGAATCGTAGATGAATACAAG 59.141 44.000 0.00 0.00 45.12 3.16
1877 2266 4.079970 AGCCGAGGAATCGTAGATGAATA 58.920 43.478 0.00 0.00 45.12 1.75
1886 2275 0.108138 CAAAGGAGCCGAGGAATCGT 60.108 55.000 0.00 0.00 0.00 3.73
1887 2276 0.175760 TCAAAGGAGCCGAGGAATCG 59.824 55.000 0.00 0.00 0.00 3.34
1890 2279 2.879103 AAATCAAAGGAGCCGAGGAA 57.121 45.000 0.00 0.00 0.00 3.36
1891 2280 3.992943 TTAAATCAAAGGAGCCGAGGA 57.007 42.857 0.00 0.00 0.00 3.71
1892 2281 4.622701 CTTTAAATCAAAGGAGCCGAGG 57.377 45.455 0.00 0.00 40.08 4.63
1912 2301 9.634021 GTCCTTCAGAAATCCTATAAAATTCCT 57.366 33.333 0.00 0.00 0.00 3.36
1913 2302 9.634021 AGTCCTTCAGAAATCCTATAAAATTCC 57.366 33.333 0.00 0.00 0.00 3.01
1916 2305 9.844257 CTCAGTCCTTCAGAAATCCTATAAAAT 57.156 33.333 0.00 0.00 0.00 1.82
1917 2306 9.046846 TCTCAGTCCTTCAGAAATCCTATAAAA 57.953 33.333 0.00 0.00 0.00 1.52
1918 2307 8.609617 TCTCAGTCCTTCAGAAATCCTATAAA 57.390 34.615 0.00 0.00 0.00 1.40
1919 2308 8.789767 ATCTCAGTCCTTCAGAAATCCTATAA 57.210 34.615 0.00 0.00 0.00 0.98
1920 2309 7.453126 GGATCTCAGTCCTTCAGAAATCCTATA 59.547 40.741 0.00 0.00 35.32 1.31
1921 2310 6.269769 GGATCTCAGTCCTTCAGAAATCCTAT 59.730 42.308 0.00 0.00 35.32 2.57
1922 2311 5.600484 GGATCTCAGTCCTTCAGAAATCCTA 59.400 44.000 0.00 0.00 35.32 2.94
1923 2312 4.408596 GGATCTCAGTCCTTCAGAAATCCT 59.591 45.833 0.00 0.00 35.32 3.24
1924 2313 4.408596 AGGATCTCAGTCCTTCAGAAATCC 59.591 45.833 0.00 0.00 46.45 3.01
1925 2314 5.612725 AGGATCTCAGTCCTTCAGAAATC 57.387 43.478 0.00 0.00 46.45 2.17
1986 2375 9.593565 GGAAAAATTCCTATAGAATCCAATCCT 57.406 33.333 0.00 0.00 44.75 3.24
2003 2392 8.659491 GCACAAAAGAATCCATAGGAAAAATTC 58.341 33.333 0.00 0.00 34.34 2.17
2004 2393 8.377799 AGCACAAAAGAATCCATAGGAAAAATT 58.622 29.630 0.00 0.00 34.34 1.82
2005 2394 7.910584 AGCACAAAAGAATCCATAGGAAAAAT 58.089 30.769 0.00 0.00 34.34 1.82
2006 2395 7.301868 AGCACAAAAGAATCCATAGGAAAAA 57.698 32.000 0.00 0.00 34.34 1.94
2007 2396 6.916360 AGCACAAAAGAATCCATAGGAAAA 57.084 33.333 0.00 0.00 34.34 2.29
2008 2397 6.945435 TGTAGCACAAAAGAATCCATAGGAAA 59.055 34.615 0.00 0.00 34.34 3.13
2009 2398 6.480763 TGTAGCACAAAAGAATCCATAGGAA 58.519 36.000 0.00 0.00 34.34 3.36
2010 2399 6.061022 TGTAGCACAAAAGAATCCATAGGA 57.939 37.500 0.00 0.00 35.55 2.94
2011 2400 6.949352 ATGTAGCACAAAAGAATCCATAGG 57.051 37.500 0.00 0.00 0.00 2.57
2012 2401 8.461222 TGAAATGTAGCACAAAAGAATCCATAG 58.539 33.333 0.00 0.00 0.00 2.23
2013 2402 8.347004 TGAAATGTAGCACAAAAGAATCCATA 57.653 30.769 0.00 0.00 0.00 2.74
2014 2403 7.230849 TGAAATGTAGCACAAAAGAATCCAT 57.769 32.000 0.00 0.00 0.00 3.41
2015 2404 6.647334 TGAAATGTAGCACAAAAGAATCCA 57.353 33.333 0.00 0.00 0.00 3.41
2016 2405 7.917505 CCTATGAAATGTAGCACAAAAGAATCC 59.082 37.037 0.00 0.00 0.00 3.01
2017 2406 8.677300 TCCTATGAAATGTAGCACAAAAGAATC 58.323 33.333 0.00 0.00 0.00 2.52
2018 2407 8.579850 TCCTATGAAATGTAGCACAAAAGAAT 57.420 30.769 0.00 0.00 0.00 2.40
2019 2408 7.994425 TCCTATGAAATGTAGCACAAAAGAA 57.006 32.000 0.00 0.00 0.00 2.52
2020 2409 7.994425 TTCCTATGAAATGTAGCACAAAAGA 57.006 32.000 0.00 0.00 0.00 2.52
2034 2423 7.993183 GGAGTGGATGTTAGATTTCCTATGAAA 59.007 37.037 0.00 0.00 44.22 2.69
2035 2424 7.127186 TGGAGTGGATGTTAGATTTCCTATGAA 59.873 37.037 0.00 0.00 0.00 2.57
2036 2425 6.615316 TGGAGTGGATGTTAGATTTCCTATGA 59.385 38.462 0.00 0.00 0.00 2.15
2037 2426 6.830912 TGGAGTGGATGTTAGATTTCCTATG 58.169 40.000 0.00 0.00 0.00 2.23
2038 2427 7.283329 GTTGGAGTGGATGTTAGATTTCCTAT 58.717 38.462 0.00 0.00 0.00 2.57
2039 2428 6.352737 GGTTGGAGTGGATGTTAGATTTCCTA 60.353 42.308 0.00 0.00 0.00 2.94
2040 2429 5.501156 GTTGGAGTGGATGTTAGATTTCCT 58.499 41.667 0.00 0.00 0.00 3.36
2041 2430 4.640647 GGTTGGAGTGGATGTTAGATTTCC 59.359 45.833 0.00 0.00 0.00 3.13
2042 2431 5.501156 AGGTTGGAGTGGATGTTAGATTTC 58.499 41.667 0.00 0.00 0.00 2.17
2043 2432 5.251700 AGAGGTTGGAGTGGATGTTAGATTT 59.748 40.000 0.00 0.00 0.00 2.17
2044 2433 4.785376 AGAGGTTGGAGTGGATGTTAGATT 59.215 41.667 0.00 0.00 0.00 2.40
2045 2434 4.366267 AGAGGTTGGAGTGGATGTTAGAT 58.634 43.478 0.00 0.00 0.00 1.98
2046 2435 3.791320 AGAGGTTGGAGTGGATGTTAGA 58.209 45.455 0.00 0.00 0.00 2.10
2047 2436 4.559862 AAGAGGTTGGAGTGGATGTTAG 57.440 45.455 0.00 0.00 0.00 2.34
2048 2437 4.993705 AAAGAGGTTGGAGTGGATGTTA 57.006 40.909 0.00 0.00 0.00 2.41
2049 2438 3.884037 AAAGAGGTTGGAGTGGATGTT 57.116 42.857 0.00 0.00 0.00 2.71
2050 2439 6.831664 ATATAAAGAGGTTGGAGTGGATGT 57.168 37.500 0.00 0.00 0.00 3.06
2051 2440 9.799106 AATTATATAAAGAGGTTGGAGTGGATG 57.201 33.333 0.00 0.00 0.00 3.51
2053 2442 9.847224 GAAATTATATAAAGAGGTTGGAGTGGA 57.153 33.333 0.00 0.00 0.00 4.02
2054 2443 9.853177 AGAAATTATATAAAGAGGTTGGAGTGG 57.147 33.333 0.00 0.00 0.00 4.00
2070 2459 9.435688 GCCACAGGAAAAACAAAGAAATTATAT 57.564 29.630 0.00 0.00 0.00 0.86
2071 2460 8.424918 TGCCACAGGAAAAACAAAGAAATTATA 58.575 29.630 0.00 0.00 0.00 0.98
2072 2461 7.278875 TGCCACAGGAAAAACAAAGAAATTAT 58.721 30.769 0.00 0.00 0.00 1.28
2073 2462 6.644347 TGCCACAGGAAAAACAAAGAAATTA 58.356 32.000 0.00 0.00 0.00 1.40
2074 2463 5.495640 TGCCACAGGAAAAACAAAGAAATT 58.504 33.333 0.00 0.00 0.00 1.82
2075 2464 5.096443 TGCCACAGGAAAAACAAAGAAAT 57.904 34.783 0.00 0.00 0.00 2.17
2076 2465 4.543590 TGCCACAGGAAAAACAAAGAAA 57.456 36.364 0.00 0.00 0.00 2.52
2077 2466 4.161189 TGATGCCACAGGAAAAACAAAGAA 59.839 37.500 0.00 0.00 0.00 2.52
2078 2467 3.703556 TGATGCCACAGGAAAAACAAAGA 59.296 39.130 0.00 0.00 0.00 2.52
2079 2468 4.057406 TGATGCCACAGGAAAAACAAAG 57.943 40.909 0.00 0.00 0.00 2.77
2080 2469 4.478206 TTGATGCCACAGGAAAAACAAA 57.522 36.364 0.00 0.00 0.00 2.83
2081 2470 4.187694 GTTTGATGCCACAGGAAAAACAA 58.812 39.130 0.00 0.00 0.00 2.83
2082 2471 3.196469 TGTTTGATGCCACAGGAAAAACA 59.804 39.130 0.00 0.00 34.62 2.83
2083 2472 3.791245 TGTTTGATGCCACAGGAAAAAC 58.209 40.909 0.00 0.00 0.00 2.43
2084 2473 4.686191 ATGTTTGATGCCACAGGAAAAA 57.314 36.364 0.00 0.00 0.00 1.94
2085 2474 4.686191 AATGTTTGATGCCACAGGAAAA 57.314 36.364 0.00 0.00 0.00 2.29
2086 2475 4.686191 AAATGTTTGATGCCACAGGAAA 57.314 36.364 0.00 0.00 0.00 3.13
2087 2476 5.999205 ATAAATGTTTGATGCCACAGGAA 57.001 34.783 0.00 0.00 0.00 3.36
2088 2477 5.722263 CAATAAATGTTTGATGCCACAGGA 58.278 37.500 0.00 0.00 0.00 3.86
2089 2478 4.330620 GCAATAAATGTTTGATGCCACAGG 59.669 41.667 6.22 0.00 31.23 4.00
2090 2479 5.172934 AGCAATAAATGTTTGATGCCACAG 58.827 37.500 11.30 0.00 35.20 3.66
2091 2480 5.149973 AGCAATAAATGTTTGATGCCACA 57.850 34.783 11.30 0.00 35.20 4.17
2092 2481 7.042523 GGATTAGCAATAAATGTTTGATGCCAC 60.043 37.037 11.30 4.40 35.20 5.01
2093 2482 6.985645 GGATTAGCAATAAATGTTTGATGCCA 59.014 34.615 11.30 0.04 35.20 4.92
2094 2483 7.212274 AGGATTAGCAATAAATGTTTGATGCC 58.788 34.615 11.30 0.00 35.20 4.40
2095 2484 9.918630 ATAGGATTAGCAATAAATGTTTGATGC 57.081 29.630 8.40 8.40 34.99 3.91
2110 2499 9.681062 GCCCACTTAAATTATATAGGATTAGCA 57.319 33.333 0.00 0.00 0.00 3.49
2111 2500 9.681062 TGCCCACTTAAATTATATAGGATTAGC 57.319 33.333 0.00 0.00 0.00 3.09
2115 2504 9.686683 GACATGCCCACTTAAATTATATAGGAT 57.313 33.333 0.00 0.00 0.00 3.24
2116 2505 8.664992 TGACATGCCCACTTAAATTATATAGGA 58.335 33.333 0.00 0.00 0.00 2.94
2117 2506 8.730680 GTGACATGCCCACTTAAATTATATAGG 58.269 37.037 10.54 0.00 0.00 2.57
2118 2507 9.507329 AGTGACATGCCCACTTAAATTATATAG 57.493 33.333 13.68 0.00 41.68 1.31
2130 2519 1.609208 GTTGAAGTGACATGCCCACT 58.391 50.000 13.68 13.68 45.88 4.00
2131 2520 0.598065 GGTTGAAGTGACATGCCCAC 59.402 55.000 9.98 9.98 34.89 4.61
2132 2521 0.539438 GGGTTGAAGTGACATGCCCA 60.539 55.000 0.00 0.00 36.27 5.36
2133 2522 0.251341 AGGGTTGAAGTGACATGCCC 60.251 55.000 0.00 0.00 36.38 5.36
2134 2523 2.489938 TAGGGTTGAAGTGACATGCC 57.510 50.000 0.00 0.00 0.00 4.40
2135 2524 2.098117 GCATAGGGTTGAAGTGACATGC 59.902 50.000 0.00 0.00 0.00 4.06
2136 2525 3.614092 AGCATAGGGTTGAAGTGACATG 58.386 45.455 0.00 0.00 0.00 3.21
2137 2526 4.307032 AAGCATAGGGTTGAAGTGACAT 57.693 40.909 0.00 0.00 32.52 3.06
2138 2527 3.788227 AAGCATAGGGTTGAAGTGACA 57.212 42.857 0.00 0.00 32.52 3.58
2139 2528 4.082733 GGAAAAGCATAGGGTTGAAGTGAC 60.083 45.833 0.00 0.00 34.38 3.67
2140 2529 4.079253 GGAAAAGCATAGGGTTGAAGTGA 58.921 43.478 0.00 0.00 34.38 3.41
2141 2530 4.082125 AGGAAAAGCATAGGGTTGAAGTG 58.918 43.478 0.00 0.00 34.38 3.16
2142 2531 4.388577 AGGAAAAGCATAGGGTTGAAGT 57.611 40.909 0.00 0.00 34.38 3.01
2143 2532 6.681368 GCAATAGGAAAAGCATAGGGTTGAAG 60.681 42.308 0.00 0.00 34.38 3.02
2144 2533 5.127031 GCAATAGGAAAAGCATAGGGTTGAA 59.873 40.000 0.00 0.00 34.38 2.69
2145 2534 4.644685 GCAATAGGAAAAGCATAGGGTTGA 59.355 41.667 0.00 0.00 34.38 3.18
2146 2535 4.646492 AGCAATAGGAAAAGCATAGGGTTG 59.354 41.667 0.00 0.00 34.38 3.77
2147 2536 4.871822 AGCAATAGGAAAAGCATAGGGTT 58.128 39.130 0.00 0.00 35.98 4.11
2148 2537 4.526438 AGCAATAGGAAAAGCATAGGGT 57.474 40.909 0.00 0.00 0.00 4.34
2149 2538 4.452455 CGTAGCAATAGGAAAAGCATAGGG 59.548 45.833 0.00 0.00 0.00 3.53
2150 2539 5.057149 ACGTAGCAATAGGAAAAGCATAGG 58.943 41.667 0.00 0.00 0.00 2.57
2151 2540 6.604735 AACGTAGCAATAGGAAAAGCATAG 57.395 37.500 0.00 0.00 0.00 2.23
2152 2541 6.995511 AAACGTAGCAATAGGAAAAGCATA 57.004 33.333 0.00 0.00 0.00 3.14
2153 2542 5.897377 AAACGTAGCAATAGGAAAAGCAT 57.103 34.783 0.00 0.00 0.00 3.79
2154 2543 5.239744 TGAAAACGTAGCAATAGGAAAAGCA 59.760 36.000 0.00 0.00 0.00 3.91
2155 2544 5.695818 TGAAAACGTAGCAATAGGAAAAGC 58.304 37.500 0.00 0.00 0.00 3.51
2156 2545 8.568732 TTTTGAAAACGTAGCAATAGGAAAAG 57.431 30.769 0.00 0.00 0.00 2.27
2157 2546 9.187455 GATTTTGAAAACGTAGCAATAGGAAAA 57.813 29.630 0.00 0.00 0.00 2.29
2158 2547 7.810759 GGATTTTGAAAACGTAGCAATAGGAAA 59.189 33.333 0.00 0.00 0.00 3.13
2159 2548 7.175990 AGGATTTTGAAAACGTAGCAATAGGAA 59.824 33.333 0.00 0.00 0.00 3.36
2160 2549 6.657541 AGGATTTTGAAAACGTAGCAATAGGA 59.342 34.615 0.00 0.00 0.00 2.94
2161 2550 6.852664 AGGATTTTGAAAACGTAGCAATAGG 58.147 36.000 0.00 0.00 0.00 2.57
2162 2551 7.634817 CGTAGGATTTTGAAAACGTAGCAATAG 59.365 37.037 0.00 0.00 0.00 1.73
2163 2552 7.331440 TCGTAGGATTTTGAAAACGTAGCAATA 59.669 33.333 0.00 0.00 0.00 1.90
2164 2553 6.148150 TCGTAGGATTTTGAAAACGTAGCAAT 59.852 34.615 0.00 0.00 0.00 3.56
2165 2554 5.466058 TCGTAGGATTTTGAAAACGTAGCAA 59.534 36.000 0.00 0.00 0.00 3.91
2166 2555 4.989797 TCGTAGGATTTTGAAAACGTAGCA 59.010 37.500 0.00 0.00 0.00 3.49
2167 2556 5.520022 TCGTAGGATTTTGAAAACGTAGC 57.480 39.130 0.00 0.00 0.00 3.58
2168 2557 7.735500 TGATTCGTAGGATTTTGAAAACGTAG 58.264 34.615 0.00 0.00 0.00 3.51
2169 2558 7.655236 TGATTCGTAGGATTTTGAAAACGTA 57.345 32.000 0.00 0.00 0.00 3.57
2170 2559 6.548441 TGATTCGTAGGATTTTGAAAACGT 57.452 33.333 0.00 0.00 0.00 3.99
2171 2560 6.523201 CCTTGATTCGTAGGATTTTGAAAACG 59.477 38.462 0.00 0.00 33.13 3.60
2172 2561 7.590279 TCCTTGATTCGTAGGATTTTGAAAAC 58.410 34.615 0.00 0.00 35.66 2.43
2173 2562 7.094377 CCTCCTTGATTCGTAGGATTTTGAAAA 60.094 37.037 7.55 0.00 39.72 2.29
2174 2563 6.374333 CCTCCTTGATTCGTAGGATTTTGAAA 59.626 38.462 7.55 0.00 39.72 2.69
2175 2564 5.880332 CCTCCTTGATTCGTAGGATTTTGAA 59.120 40.000 7.55 0.00 39.72 2.69
2176 2565 5.428253 CCTCCTTGATTCGTAGGATTTTGA 58.572 41.667 7.55 0.00 39.72 2.69
2177 2566 4.035675 GCCTCCTTGATTCGTAGGATTTTG 59.964 45.833 7.55 0.00 39.72 2.44
2178 2567 4.200092 GCCTCCTTGATTCGTAGGATTTT 58.800 43.478 7.55 0.00 39.72 1.82
2179 2568 3.433740 GGCCTCCTTGATTCGTAGGATTT 60.434 47.826 0.00 0.00 39.72 2.17
2180 2569 2.104963 GGCCTCCTTGATTCGTAGGATT 59.895 50.000 0.00 0.00 39.72 3.01
2181 2570 1.694696 GGCCTCCTTGATTCGTAGGAT 59.305 52.381 0.00 0.00 39.72 3.24
2182 2571 1.120530 GGCCTCCTTGATTCGTAGGA 58.879 55.000 0.00 7.03 38.22 2.94
2183 2572 0.106894 GGGCCTCCTTGATTCGTAGG 59.893 60.000 0.84 0.00 0.00 3.18
2184 2573 1.123928 AGGGCCTCCTTGATTCGTAG 58.876 55.000 0.00 0.00 41.56 3.51
2185 2574 0.830648 CAGGGCCTCCTTGATTCGTA 59.169 55.000 0.95 0.00 42.67 3.43
2186 2575 0.909610 TCAGGGCCTCCTTGATTCGT 60.910 55.000 0.95 0.00 42.67 3.85
2187 2576 0.253044 TTCAGGGCCTCCTTGATTCG 59.747 55.000 0.95 0.00 42.67 3.34
2188 2577 2.514458 TTTCAGGGCCTCCTTGATTC 57.486 50.000 0.95 0.00 42.67 2.52
2189 2578 3.369175 GAATTTCAGGGCCTCCTTGATT 58.631 45.455 0.95 0.00 42.67 2.57
2190 2579 2.358615 GGAATTTCAGGGCCTCCTTGAT 60.359 50.000 0.95 0.00 42.67 2.57
2191 2580 1.005924 GGAATTTCAGGGCCTCCTTGA 59.994 52.381 0.95 0.00 42.67 3.02
2192 2581 1.006400 AGGAATTTCAGGGCCTCCTTG 59.994 52.381 0.95 0.00 42.67 3.61
2193 2582 1.387119 AGGAATTTCAGGGCCTCCTT 58.613 50.000 0.95 0.00 42.67 3.36
2194 2583 1.286257 GAAGGAATTTCAGGGCCTCCT 59.714 52.381 0.95 2.85 46.26 3.69
2195 2584 1.005924 TGAAGGAATTTCAGGGCCTCC 59.994 52.381 0.95 0.00 40.82 4.30
2196 2585 2.095461 GTGAAGGAATTTCAGGGCCTC 58.905 52.381 0.95 0.00 46.09 4.70
2197 2586 1.614317 CGTGAAGGAATTTCAGGGCCT 60.614 52.381 0.00 0.00 46.09 5.19
2198 2587 0.811281 CGTGAAGGAATTTCAGGGCC 59.189 55.000 0.00 0.00 46.09 5.80
2210 2599 0.108329 ACGCTAACCATCCGTGAAGG 60.108 55.000 0.00 0.00 42.97 3.46
2211 2600 1.659098 GAACGCTAACCATCCGTGAAG 59.341 52.381 0.00 0.00 35.13 3.02
2212 2601 1.274167 AGAACGCTAACCATCCGTGAA 59.726 47.619 0.00 0.00 35.13 3.18
2213 2602 0.892755 AGAACGCTAACCATCCGTGA 59.107 50.000 0.00 0.00 35.13 4.35
2214 2603 2.572191 TAGAACGCTAACCATCCGTG 57.428 50.000 0.00 0.00 35.13 4.94
2215 2604 2.691526 TCATAGAACGCTAACCATCCGT 59.308 45.455 0.00 0.00 36.68 4.69
2216 2605 3.364889 TCATAGAACGCTAACCATCCG 57.635 47.619 0.00 0.00 0.00 4.18
2217 2606 6.456501 ACTAATCATAGAACGCTAACCATCC 58.543 40.000 0.00 0.00 33.15 3.51
2218 2607 7.270793 CGTACTAATCATAGAACGCTAACCATC 59.729 40.741 0.00 0.00 33.15 3.51
2219 2608 7.082602 CGTACTAATCATAGAACGCTAACCAT 58.917 38.462 0.00 0.00 33.15 3.55
2220 2609 6.038603 ACGTACTAATCATAGAACGCTAACCA 59.961 38.462 0.00 0.00 33.15 3.67
2221 2610 6.359087 CACGTACTAATCATAGAACGCTAACC 59.641 42.308 0.00 0.00 33.15 2.85
2222 2611 7.128331 TCACGTACTAATCATAGAACGCTAAC 58.872 38.462 0.00 0.00 33.15 2.34
2223 2612 7.250445 TCACGTACTAATCATAGAACGCTAA 57.750 36.000 0.00 0.00 33.15 3.09
2224 2613 6.849588 TCACGTACTAATCATAGAACGCTA 57.150 37.500 0.00 0.00 33.15 4.26
2225 2614 5.746307 TCACGTACTAATCATAGAACGCT 57.254 39.130 0.00 0.00 33.15 5.07
2226 2615 5.970023 AGTTCACGTACTAATCATAGAACGC 59.030 40.000 0.00 0.00 39.13 4.84
2227 2616 6.353842 CGAGTTCACGTACTAATCATAGAACG 59.646 42.308 0.00 0.00 39.13 3.95
2228 2617 7.163845 CACGAGTTCACGTACTAATCATAGAAC 59.836 40.741 0.00 0.00 44.76 3.01
2229 2618 7.064966 TCACGAGTTCACGTACTAATCATAGAA 59.935 37.037 0.00 0.00 44.76 2.10
2230 2619 6.536224 TCACGAGTTCACGTACTAATCATAGA 59.464 38.462 0.00 0.00 44.76 1.98
2231 2620 6.712549 TCACGAGTTCACGTACTAATCATAG 58.287 40.000 0.00 0.00 44.76 2.23
2232 2621 6.667007 TCACGAGTTCACGTACTAATCATA 57.333 37.500 0.00 0.00 44.76 2.15
2233 2622 5.556355 TCACGAGTTCACGTACTAATCAT 57.444 39.130 0.00 0.00 44.76 2.45
2234 2623 5.179929 TCTTCACGAGTTCACGTACTAATCA 59.820 40.000 0.00 0.00 44.76 2.57
2235 2624 5.507527 GTCTTCACGAGTTCACGTACTAATC 59.492 44.000 0.00 0.00 44.76 1.75
2236 2625 5.388944 GTCTTCACGAGTTCACGTACTAAT 58.611 41.667 0.00 0.00 44.76 1.73
2237 2626 4.319766 GGTCTTCACGAGTTCACGTACTAA 60.320 45.833 0.00 0.00 44.76 2.24
2238 2627 3.187227 GGTCTTCACGAGTTCACGTACTA 59.813 47.826 0.00 0.00 44.76 1.82
2239 2628 2.031333 GGTCTTCACGAGTTCACGTACT 60.031 50.000 0.00 0.00 44.76 2.73
2240 2629 2.314122 GGTCTTCACGAGTTCACGTAC 58.686 52.381 0.00 0.00 44.76 3.67
2241 2630 1.069703 CGGTCTTCACGAGTTCACGTA 60.070 52.381 0.00 0.00 44.76 3.57
2243 2632 0.040692 TCGGTCTTCACGAGTTCACG 60.041 55.000 0.00 0.00 35.12 4.35
2244 2633 1.986378 CATCGGTCTTCACGAGTTCAC 59.014 52.381 0.00 0.00 44.24 3.18
2361 2757 6.184068 TCAATGGAAAATATTTCGGAGTGGA 58.816 36.000 0.10 0.00 0.00 4.02
2451 2847 3.050275 GACGGAAGCACTGGTGGC 61.050 66.667 2.84 0.00 0.00 5.01
2452 2848 0.606401 AATGACGGAAGCACTGGTGG 60.606 55.000 2.84 0.00 0.00 4.61
2472 2868 0.605589 GCCATAGAGGATCCTGGACG 59.394 60.000 22.02 4.87 39.98 4.79
2474 2870 0.567687 TGGCCATAGAGGATCCTGGA 59.432 55.000 22.02 6.85 39.98 3.86
2478 2874 2.022718 ACTCTGGCCATAGAGGATCC 57.977 55.000 23.93 2.48 46.69 3.36
2499 2895 3.435186 GGGCTCTTGCTTCGTGCC 61.435 66.667 0.00 0.00 42.00 5.01
2500 2896 2.669569 TGGGCTCTTGCTTCGTGC 60.670 61.111 0.00 0.00 43.25 5.34
2501 2897 1.004560 TCTGGGCTCTTGCTTCGTG 60.005 57.895 0.00 0.00 39.59 4.35
2502 2898 1.004440 GTCTGGGCTCTTGCTTCGT 60.004 57.895 0.00 0.00 39.59 3.85
2503 2899 0.532573 TAGTCTGGGCTCTTGCTTCG 59.467 55.000 0.00 0.00 39.59 3.79
2504 2900 2.998316 ATAGTCTGGGCTCTTGCTTC 57.002 50.000 0.00 0.00 39.59 3.86
2505 2901 5.104360 TCAAATATAGTCTGGGCTCTTGCTT 60.104 40.000 0.00 0.00 39.59 3.91
2506 2902 4.410228 TCAAATATAGTCTGGGCTCTTGCT 59.590 41.667 0.00 0.00 39.59 3.91
2507 2903 4.708177 TCAAATATAGTCTGGGCTCTTGC 58.292 43.478 0.00 0.00 38.76 4.01
2508 2904 6.528321 TGATCAAATATAGTCTGGGCTCTTG 58.472 40.000 0.00 0.00 0.00 3.02
2509 2905 6.753913 TGATCAAATATAGTCTGGGCTCTT 57.246 37.500 0.00 0.00 0.00 2.85
2510 2906 6.949117 ATGATCAAATATAGTCTGGGCTCT 57.051 37.500 0.00 0.00 0.00 4.09
2511 2907 7.663081 TCAAATGATCAAATATAGTCTGGGCTC 59.337 37.037 0.00 0.00 0.00 4.70
2512 2908 7.520798 TCAAATGATCAAATATAGTCTGGGCT 58.479 34.615 0.00 0.00 0.00 5.19
2513 2909 7.750229 TCAAATGATCAAATATAGTCTGGGC 57.250 36.000 0.00 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.