Multiple sequence alignment - TraesCS3D01G291000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G291000 chr3D 100.000 3536 0 0 1 3536 401052060 401048525 0.000000e+00 6530
1 TraesCS3D01G291000 chr3A 94.356 1630 63 12 910 2528 521601982 521600371 0.000000e+00 2473
2 TraesCS3D01G291000 chr3A 95.714 490 17 2 3051 3536 521599874 521599385 0.000000e+00 785
3 TraesCS3D01G291000 chr3A 96.253 427 15 1 2526 2952 521600306 521599881 0.000000e+00 699
4 TraesCS3D01G291000 chr3A 91.354 347 24 2 464 805 521608491 521608146 1.490000e-128 470
5 TraesCS3D01G291000 chr3A 88.542 96 11 0 803 898 521605825 521605730 2.230000e-22 117
6 TraesCS3D01G291000 chr3B 94.932 888 35 5 1641 2528 526809919 526809042 0.000000e+00 1382
7 TraesCS3D01G291000 chr3B 95.434 679 24 4 922 1593 526810605 526809927 0.000000e+00 1075
8 TraesCS3D01G291000 chr3B 95.267 655 17 5 2526 3179 526808977 526808336 0.000000e+00 1026
9 TraesCS3D01G291000 chr3B 95.752 306 10 2 3234 3536 526808337 526808032 1.140000e-134 490


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G291000 chr3D 401048525 401052060 3535 True 6530.00 6530 100.00000 1 3536 1 chr3D.!!$R1 3535
1 TraesCS3D01G291000 chr3A 521599385 521608491 9106 True 908.80 2473 93.24380 464 3536 5 chr3A.!!$R1 3072
2 TraesCS3D01G291000 chr3B 526808032 526810605 2573 True 993.25 1382 95.34625 922 3536 4 chr3B.!!$R1 2614

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
428 429 0.032017 ATCCTAGTGGGGCGAGTTCT 60.032 55.0 0.00 0.00 35.33 3.01 F
1126 7191 0.321653 CGTTTCTCCCCAGGGTGAAG 60.322 60.0 17.29 6.41 44.96 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1328 7394 1.611491 GTCAAGTTCGGGCAAATCCAA 59.389 47.619 0.00 0.00 36.21 3.53 R
2604 8749 0.940833 TTTTGATGCGCGTCTGTTCA 59.059 45.000 28.53 7.52 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.636454 AGAATAGTGGATTACTTTGGGTCA 57.364 37.500 0.00 0.00 40.89 4.02
24 25 7.027874 AGAATAGTGGATTACTTTGGGTCAA 57.972 36.000 0.00 0.00 40.89 3.18
25 26 7.466804 AGAATAGTGGATTACTTTGGGTCAAA 58.533 34.615 0.00 0.00 40.89 2.69
26 27 7.947890 AGAATAGTGGATTACTTTGGGTCAAAA 59.052 33.333 0.00 0.00 40.89 2.44
27 28 8.485578 AATAGTGGATTACTTTGGGTCAAAAA 57.514 30.769 0.00 0.00 40.89 1.94
56 57 7.308450 AGTGGATTACTAGATGCATACATGT 57.692 36.000 2.69 2.69 38.04 3.21
57 58 7.382110 AGTGGATTACTAGATGCATACATGTC 58.618 38.462 0.00 0.00 38.04 3.06
58 59 7.015584 AGTGGATTACTAGATGCATACATGTCA 59.984 37.037 0.00 0.00 38.04 3.58
59 60 7.821359 GTGGATTACTAGATGCATACATGTCAT 59.179 37.037 0.00 0.00 36.35 3.06
60 61 9.034800 TGGATTACTAGATGCATACATGTCATA 57.965 33.333 0.00 0.00 36.35 2.15
61 62 9.307121 GGATTACTAGATGCATACATGTCATAC 57.693 37.037 0.00 0.00 36.35 2.39
62 63 9.307121 GATTACTAGATGCATACATGTCATACC 57.693 37.037 0.00 0.00 36.35 2.73
63 64 6.924913 ACTAGATGCATACATGTCATACCT 57.075 37.500 0.00 0.00 36.35 3.08
64 65 9.528489 TTACTAGATGCATACATGTCATACCTA 57.472 33.333 0.00 0.00 36.35 3.08
65 66 8.601047 ACTAGATGCATACATGTCATACCTAT 57.399 34.615 0.00 0.00 36.35 2.57
66 67 8.473219 ACTAGATGCATACATGTCATACCTATG 58.527 37.037 0.00 0.00 36.35 2.23
67 68 7.250032 AGATGCATACATGTCATACCTATGT 57.750 36.000 0.00 0.00 36.35 2.29
68 69 7.683578 AGATGCATACATGTCATACCTATGTT 58.316 34.615 0.00 0.00 36.35 2.71
69 70 7.605309 AGATGCATACATGTCATACCTATGTTG 59.395 37.037 0.00 0.00 36.35 3.33
70 71 5.997129 TGCATACATGTCATACCTATGTTGG 59.003 40.000 0.00 0.00 36.52 3.77
71 72 5.997746 GCATACATGTCATACCTATGTTGGT 59.002 40.000 0.00 0.00 43.66 3.67
72 73 6.147821 GCATACATGTCATACCTATGTTGGTC 59.852 42.308 0.00 0.00 41.22 4.02
73 74 5.692115 ACATGTCATACCTATGTTGGTCA 57.308 39.130 0.00 0.00 41.22 4.02
74 75 6.252599 ACATGTCATACCTATGTTGGTCAT 57.747 37.500 0.00 0.00 41.22 3.06
75 76 6.662755 ACATGTCATACCTATGTTGGTCATT 58.337 36.000 0.00 0.00 41.22 2.57
76 77 7.801104 ACATGTCATACCTATGTTGGTCATTA 58.199 34.615 0.00 0.00 41.22 1.90
77 78 8.439971 ACATGTCATACCTATGTTGGTCATTAT 58.560 33.333 0.00 0.00 41.22 1.28
78 79 9.288576 CATGTCATACCTATGTTGGTCATTATT 57.711 33.333 0.00 0.00 41.22 1.40
79 80 8.902540 TGTCATACCTATGTTGGTCATTATTC 57.097 34.615 0.00 0.00 41.22 1.75
80 81 8.490311 TGTCATACCTATGTTGGTCATTATTCA 58.510 33.333 0.00 0.00 41.22 2.57
81 82 8.993121 GTCATACCTATGTTGGTCATTATTCAG 58.007 37.037 0.00 0.00 41.22 3.02
82 83 8.156820 TCATACCTATGTTGGTCATTATTCAGG 58.843 37.037 0.00 0.00 41.22 3.86
83 84 6.327386 ACCTATGTTGGTCATTATTCAGGT 57.673 37.500 0.00 0.00 36.34 4.00
84 85 6.731467 ACCTATGTTGGTCATTATTCAGGTT 58.269 36.000 0.00 0.00 37.26 3.50
85 86 6.828785 ACCTATGTTGGTCATTATTCAGGTTC 59.171 38.462 0.00 0.00 37.26 3.62
86 87 6.263168 CCTATGTTGGTCATTATTCAGGTTCC 59.737 42.308 0.00 0.00 37.91 3.62
87 88 4.991776 TGTTGGTCATTATTCAGGTTCCA 58.008 39.130 0.00 0.00 0.00 3.53
88 89 4.764823 TGTTGGTCATTATTCAGGTTCCAC 59.235 41.667 0.00 0.00 0.00 4.02
89 90 3.963129 TGGTCATTATTCAGGTTCCACC 58.037 45.455 0.00 0.00 38.99 4.61
90 91 3.332187 TGGTCATTATTCAGGTTCCACCA 59.668 43.478 0.00 0.00 41.95 4.17
91 92 4.017591 TGGTCATTATTCAGGTTCCACCAT 60.018 41.667 0.00 0.00 41.95 3.55
92 93 4.956075 GGTCATTATTCAGGTTCCACCATT 59.044 41.667 0.00 0.00 41.95 3.16
93 94 5.163519 GGTCATTATTCAGGTTCCACCATTG 60.164 44.000 0.00 0.00 41.95 2.82
94 95 5.418840 GTCATTATTCAGGTTCCACCATTGT 59.581 40.000 0.00 0.00 41.95 2.71
95 96 6.015918 TCATTATTCAGGTTCCACCATTGTT 58.984 36.000 0.00 0.00 41.95 2.83
96 97 6.496565 TCATTATTCAGGTTCCACCATTGTTT 59.503 34.615 0.00 0.00 41.95 2.83
97 98 6.739331 TTATTCAGGTTCCACCATTGTTTT 57.261 33.333 0.00 0.00 41.95 2.43
98 99 5.628797 ATTCAGGTTCCACCATTGTTTTT 57.371 34.783 0.00 0.00 41.95 1.94
99 100 4.664150 TCAGGTTCCACCATTGTTTTTC 57.336 40.909 0.00 0.00 41.95 2.29
100 101 3.067461 TCAGGTTCCACCATTGTTTTTCG 59.933 43.478 0.00 0.00 41.95 3.46
101 102 3.028130 AGGTTCCACCATTGTTTTTCGT 58.972 40.909 0.00 0.00 41.95 3.85
102 103 4.036971 CAGGTTCCACCATTGTTTTTCGTA 59.963 41.667 0.00 0.00 41.95 3.43
103 104 4.830600 AGGTTCCACCATTGTTTTTCGTAT 59.169 37.500 0.00 0.00 41.95 3.06
104 105 4.920927 GGTTCCACCATTGTTTTTCGTATG 59.079 41.667 0.00 0.00 38.42 2.39
105 106 4.775058 TCCACCATTGTTTTTCGTATGG 57.225 40.909 0.00 0.00 42.56 2.74
107 108 5.314529 TCCACCATTGTTTTTCGTATGGTA 58.685 37.500 5.38 0.00 46.76 3.25
108 109 5.768662 TCCACCATTGTTTTTCGTATGGTAA 59.231 36.000 5.38 0.00 46.76 2.85
109 110 6.264744 TCCACCATTGTTTTTCGTATGGTAAA 59.735 34.615 5.38 0.00 46.76 2.01
110 111 6.924060 CCACCATTGTTTTTCGTATGGTAAAA 59.076 34.615 5.38 0.00 46.76 1.52
111 112 7.600752 CCACCATTGTTTTTCGTATGGTAAAAT 59.399 33.333 5.38 0.00 46.76 1.82
112 113 9.627395 CACCATTGTTTTTCGTATGGTAAAATA 57.373 29.630 5.38 0.00 46.76 1.40
116 117 8.690680 TTGTTTTTCGTATGGTAAAATATGCC 57.309 30.769 0.00 0.00 0.00 4.40
117 118 8.057536 TGTTTTTCGTATGGTAAAATATGCCT 57.942 30.769 0.00 0.00 34.34 4.75
118 119 9.175312 TGTTTTTCGTATGGTAAAATATGCCTA 57.825 29.630 0.00 0.00 34.34 3.93
121 122 7.915293 TTCGTATGGTAAAATATGCCTATGG 57.085 36.000 0.00 0.00 34.34 2.74
122 123 7.247456 TCGTATGGTAAAATATGCCTATGGA 57.753 36.000 0.00 0.00 34.34 3.41
123 124 7.857456 TCGTATGGTAAAATATGCCTATGGAT 58.143 34.615 0.00 0.00 34.34 3.41
124 125 8.983789 TCGTATGGTAAAATATGCCTATGGATA 58.016 33.333 0.00 0.00 34.34 2.59
125 126 9.778741 CGTATGGTAAAATATGCCTATGGATAT 57.221 33.333 0.00 0.00 34.34 1.63
128 129 9.632638 ATGGTAAAATATGCCTATGGATATGAC 57.367 33.333 0.00 0.00 34.34 3.06
129 130 8.610369 TGGTAAAATATGCCTATGGATATGACA 58.390 33.333 0.00 0.00 34.34 3.58
130 131 8.893727 GGTAAAATATGCCTATGGATATGACAC 58.106 37.037 0.00 0.00 0.00 3.67
131 132 9.672673 GTAAAATATGCCTATGGATATGACACT 57.327 33.333 0.00 0.00 0.00 3.55
132 133 8.571461 AAAATATGCCTATGGATATGACACTG 57.429 34.615 0.00 0.00 0.00 3.66
133 134 4.564782 ATGCCTATGGATATGACACTGG 57.435 45.455 0.00 0.00 0.00 4.00
134 135 2.038952 TGCCTATGGATATGACACTGGC 59.961 50.000 11.78 11.78 38.91 4.85
135 136 2.932622 GCCTATGGATATGACACTGGCG 60.933 54.545 0.00 0.00 32.60 5.69
136 137 2.354103 CCTATGGATATGACACTGGCGG 60.354 54.545 0.00 0.00 0.00 6.13
137 138 1.423584 ATGGATATGACACTGGCGGA 58.576 50.000 0.00 0.00 0.00 5.54
138 139 0.464036 TGGATATGACACTGGCGGAC 59.536 55.000 0.00 0.00 0.00 4.79
139 140 0.597637 GGATATGACACTGGCGGACG 60.598 60.000 0.00 0.00 0.00 4.79
140 141 0.102481 GATATGACACTGGCGGACGT 59.898 55.000 0.00 0.00 0.00 4.34
141 142 0.179111 ATATGACACTGGCGGACGTG 60.179 55.000 0.00 4.63 37.18 4.49
142 143 2.220615 TATGACACTGGCGGACGTGG 62.221 60.000 0.00 0.00 35.51 4.94
143 144 4.295119 GACACTGGCGGACGTGGT 62.295 66.667 0.00 0.00 35.51 4.16
144 145 4.602259 ACACTGGCGGACGTGGTG 62.602 66.667 0.00 5.57 35.51 4.17
145 146 4.602259 CACTGGCGGACGTGGTGT 62.602 66.667 0.00 0.00 0.00 4.16
146 147 4.602259 ACTGGCGGACGTGGTGTG 62.602 66.667 0.00 0.00 0.00 3.82
147 148 4.602259 CTGGCGGACGTGGTGTGT 62.602 66.667 0.00 0.00 0.00 3.72
148 149 3.215597 CTGGCGGACGTGGTGTGTA 62.216 63.158 0.00 0.00 0.00 2.90
149 150 2.431942 GGCGGACGTGGTGTGTAG 60.432 66.667 0.00 0.00 0.00 2.74
150 151 3.110178 GCGGACGTGGTGTGTAGC 61.110 66.667 0.00 0.00 0.00 3.58
151 152 2.649034 CGGACGTGGTGTGTAGCT 59.351 61.111 0.00 0.00 0.00 3.32
152 153 1.733041 CGGACGTGGTGTGTAGCTG 60.733 63.158 0.00 0.00 0.00 4.24
153 154 1.374252 GGACGTGGTGTGTAGCTGG 60.374 63.158 0.00 0.00 0.00 4.85
154 155 2.027625 GACGTGGTGTGTAGCTGGC 61.028 63.158 0.00 0.00 0.00 4.85
155 156 3.112075 CGTGGTGTGTAGCTGGCG 61.112 66.667 0.00 0.00 0.00 5.69
156 157 2.742372 GTGGTGTGTAGCTGGCGG 60.742 66.667 0.00 0.00 0.00 6.13
157 158 4.697756 TGGTGTGTAGCTGGCGGC 62.698 66.667 11.19 11.19 42.19 6.53
167 168 4.172512 CTGGCGGCTCCTGATGCT 62.173 66.667 11.43 0.00 35.98 3.79
168 169 4.166888 TGGCGGCTCCTGATGCTC 62.167 66.667 11.43 0.00 35.26 4.26
169 170 4.925861 GGCGGCTCCTGATGCTCC 62.926 72.222 0.00 0.00 0.00 4.70
170 171 3.859414 GCGGCTCCTGATGCTCCT 61.859 66.667 0.00 0.00 0.00 3.69
171 172 2.420890 CGGCTCCTGATGCTCCTC 59.579 66.667 0.00 0.00 0.00 3.71
172 173 2.828145 GGCTCCTGATGCTCCTCC 59.172 66.667 0.00 0.00 0.00 4.30
173 174 1.765657 GGCTCCTGATGCTCCTCCT 60.766 63.158 0.00 0.00 0.00 3.69
174 175 1.344191 GGCTCCTGATGCTCCTCCTT 61.344 60.000 0.00 0.00 0.00 3.36
175 176 0.106521 GCTCCTGATGCTCCTCCTTC 59.893 60.000 0.00 0.00 0.00 3.46
176 177 0.388659 CTCCTGATGCTCCTCCTTCG 59.611 60.000 0.00 0.00 0.00 3.79
177 178 1.045350 TCCTGATGCTCCTCCTTCGG 61.045 60.000 0.00 0.00 0.00 4.30
178 179 1.227497 CTGATGCTCCTCCTTCGGC 60.227 63.158 0.00 0.00 0.00 5.54
179 180 1.684386 CTGATGCTCCTCCTTCGGCT 61.684 60.000 0.00 0.00 0.00 5.52
180 181 1.267574 TGATGCTCCTCCTTCGGCTT 61.268 55.000 0.00 0.00 0.00 4.35
181 182 0.753262 GATGCTCCTCCTTCGGCTTA 59.247 55.000 0.00 0.00 0.00 3.09
182 183 0.755686 ATGCTCCTCCTTCGGCTTAG 59.244 55.000 0.00 0.00 0.00 2.18
183 184 1.330655 TGCTCCTCCTTCGGCTTAGG 61.331 60.000 0.00 0.00 0.00 2.69
184 185 1.443828 CTCCTCCTTCGGCTTAGGC 59.556 63.158 0.00 0.00 32.59 3.93
192 193 3.576356 CGGCTTAGGCGTGCATGG 61.576 66.667 20.07 0.00 46.33 3.66
193 194 3.211963 GGCTTAGGCGTGCATGGG 61.212 66.667 8.27 0.00 39.81 4.00
194 195 2.124736 GCTTAGGCGTGCATGGGA 60.125 61.111 8.27 0.00 0.00 4.37
195 196 2.182842 GCTTAGGCGTGCATGGGAG 61.183 63.158 8.27 0.00 0.00 4.30
196 197 2.124736 TTAGGCGTGCATGGGAGC 60.125 61.111 8.27 0.37 0.00 4.70
197 198 2.874648 CTTAGGCGTGCATGGGAGCA 62.875 60.000 8.27 0.00 43.35 4.26
203 204 4.670199 TGCATGGGAGCATGGAAG 57.330 55.556 0.00 0.00 40.11 3.46
204 205 1.693034 TGCATGGGAGCATGGAAGT 59.307 52.632 0.00 0.00 40.11 3.01
205 206 0.394762 TGCATGGGAGCATGGAAGTC 60.395 55.000 0.00 0.00 40.11 3.01
206 207 1.105759 GCATGGGAGCATGGAAGTCC 61.106 60.000 0.00 0.00 33.41 3.85
216 217 2.447630 TGGAAGTCCACGTCCATGT 58.552 52.632 10.00 0.00 46.83 3.21
217 218 0.320374 TGGAAGTCCACGTCCATGTC 59.680 55.000 10.00 0.00 46.83 3.06
218 219 0.608640 GGAAGTCCACGTCCATGTCT 59.391 55.000 6.79 0.00 42.86 3.41
219 220 1.673033 GGAAGTCCACGTCCATGTCTG 60.673 57.143 6.79 0.00 42.86 3.51
220 221 0.320771 AAGTCCACGTCCATGTCTGC 60.321 55.000 0.00 0.00 0.00 4.26
221 222 1.741770 GTCCACGTCCATGTCTGCC 60.742 63.158 0.00 0.00 0.00 4.85
222 223 2.436646 CCACGTCCATGTCTGCCC 60.437 66.667 0.00 0.00 0.00 5.36
223 224 2.436646 CACGTCCATGTCTGCCCC 60.437 66.667 0.00 0.00 0.00 5.80
224 225 2.927856 ACGTCCATGTCTGCCCCA 60.928 61.111 0.00 0.00 0.00 4.96
225 226 2.436646 CGTCCATGTCTGCCCCAC 60.437 66.667 0.00 0.00 0.00 4.61
226 227 2.959484 CGTCCATGTCTGCCCCACT 61.959 63.158 0.00 0.00 0.00 4.00
227 228 1.613317 CGTCCATGTCTGCCCCACTA 61.613 60.000 0.00 0.00 0.00 2.74
228 229 0.179000 GTCCATGTCTGCCCCACTAG 59.821 60.000 0.00 0.00 0.00 2.57
229 230 1.153086 CCATGTCTGCCCCACTAGC 60.153 63.158 0.00 0.00 0.00 3.42
230 231 1.153086 CATGTCTGCCCCACTAGCC 60.153 63.158 0.00 0.00 0.00 3.93
231 232 2.378634 ATGTCTGCCCCACTAGCCC 61.379 63.158 0.00 0.00 0.00 5.19
232 233 2.689034 GTCTGCCCCACTAGCCCT 60.689 66.667 0.00 0.00 0.00 5.19
233 234 2.688666 TCTGCCCCACTAGCCCTG 60.689 66.667 0.00 0.00 0.00 4.45
234 235 2.688666 CTGCCCCACTAGCCCTGA 60.689 66.667 0.00 0.00 0.00 3.86
235 236 2.688666 TGCCCCACTAGCCCTGAG 60.689 66.667 0.00 0.00 0.00 3.35
236 237 4.182433 GCCCCACTAGCCCTGAGC 62.182 72.222 0.00 0.00 44.25 4.26
245 246 3.282920 GCCCTGAGCGCCAATAGC 61.283 66.667 2.29 0.00 38.52 2.97
246 247 2.190313 CCCTGAGCGCCAATAGCA 59.810 61.111 2.29 0.00 44.04 3.49
247 248 1.890979 CCCTGAGCGCCAATAGCAG 60.891 63.158 2.29 2.33 44.04 4.24
248 249 1.890979 CCTGAGCGCCAATAGCAGG 60.891 63.158 2.29 8.18 44.04 4.85
249 250 1.890979 CTGAGCGCCAATAGCAGGG 60.891 63.158 2.29 0.00 44.04 4.45
250 251 3.282920 GAGCGCCAATAGCAGGGC 61.283 66.667 2.29 0.00 46.80 5.19
256 257 3.575506 CCAATAGCAGGGCAAGTCA 57.424 52.632 0.00 0.00 0.00 3.41
257 258 1.098050 CCAATAGCAGGGCAAGTCAC 58.902 55.000 0.00 0.00 0.00 3.67
258 259 1.340405 CCAATAGCAGGGCAAGTCACT 60.340 52.381 0.00 0.00 0.00 3.41
259 260 1.741706 CAATAGCAGGGCAAGTCACTG 59.258 52.381 0.00 0.00 35.40 3.66
261 262 3.730761 GCAGGGCAAGTCACTGCG 61.731 66.667 3.24 0.00 46.65 5.18
265 266 3.782244 GGCAAGTCACTGCGCGAG 61.782 66.667 12.10 7.21 43.60 5.03
289 290 3.898509 CCGCTCTGAGGCCTCGAG 61.899 72.222 32.64 32.64 35.18 4.04
290 291 3.898509 CGCTCTGAGGCCTCGAGG 61.899 72.222 34.91 27.83 33.81 4.63
291 292 3.535962 GCTCTGAGGCCTCGAGGG 61.536 72.222 34.91 28.87 33.81 4.30
292 293 2.043450 CTCTGAGGCCTCGAGGGT 60.043 66.667 30.88 2.64 37.43 4.34
293 294 2.043852 TCTGAGGCCTCGAGGGTC 60.044 66.667 32.06 16.64 40.74 4.46
298 299 3.394836 GGCCTCGAGGGTCTGCTT 61.395 66.667 32.06 0.00 36.61 3.91
299 300 2.125350 GCCTCGAGGGTCTGCTTG 60.125 66.667 32.06 4.35 37.43 4.01
300 301 2.650116 GCCTCGAGGGTCTGCTTGA 61.650 63.158 32.06 0.00 37.43 3.02
301 302 1.515020 CCTCGAGGGTCTGCTTGAG 59.485 63.158 24.62 0.00 0.00 3.02
302 303 1.515020 CTCGAGGGTCTGCTTGAGG 59.485 63.158 3.91 0.00 0.00 3.86
303 304 1.954362 CTCGAGGGTCTGCTTGAGGG 61.954 65.000 3.91 0.00 0.00 4.30
304 305 2.270527 GAGGGTCTGCTTGAGGGC 59.729 66.667 0.00 0.00 0.00 5.19
305 306 3.334054 AGGGTCTGCTTGAGGGCC 61.334 66.667 0.00 0.00 0.00 5.80
306 307 3.334054 GGGTCTGCTTGAGGGCCT 61.334 66.667 5.25 5.25 0.00 5.19
307 308 2.270527 GGTCTGCTTGAGGGCCTC 59.729 66.667 26.95 26.95 0.00 4.70
308 309 2.125350 GTCTGCTTGAGGGCCTCG 60.125 66.667 27.58 15.92 32.35 4.63
309 310 2.604686 TCTGCTTGAGGGCCTCGT 60.605 61.111 27.58 0.00 32.35 4.18
310 311 2.125350 CTGCTTGAGGGCCTCGTC 60.125 66.667 27.58 18.60 32.35 4.20
311 312 3.997064 CTGCTTGAGGGCCTCGTCG 62.997 68.421 27.58 18.56 32.35 5.12
312 313 4.070552 GCTTGAGGGCCTCGTCGT 62.071 66.667 27.58 0.00 32.35 4.34
313 314 2.707849 GCTTGAGGGCCTCGTCGTA 61.708 63.158 27.58 7.79 32.35 3.43
314 315 1.139095 CTTGAGGGCCTCGTCGTAC 59.861 63.158 27.58 4.01 32.35 3.67
315 316 1.303888 TTGAGGGCCTCGTCGTACT 60.304 57.895 27.58 0.00 32.35 2.73
316 317 1.310933 TTGAGGGCCTCGTCGTACTC 61.311 60.000 27.58 2.73 32.35 2.59
317 318 1.748122 GAGGGCCTCGTCGTACTCA 60.748 63.158 19.53 0.00 0.00 3.41
318 319 1.991099 GAGGGCCTCGTCGTACTCAC 61.991 65.000 19.53 0.00 0.00 3.51
319 320 2.488820 GGCCTCGTCGTACTCACC 59.511 66.667 0.00 0.00 0.00 4.02
320 321 2.488820 GCCTCGTCGTACTCACCC 59.511 66.667 0.00 0.00 0.00 4.61
321 322 3.061260 GCCTCGTCGTACTCACCCC 62.061 68.421 0.00 0.00 0.00 4.95
322 323 2.413142 CCTCGTCGTACTCACCCCC 61.413 68.421 0.00 0.00 0.00 5.40
323 324 1.378250 CTCGTCGTACTCACCCCCT 60.378 63.158 0.00 0.00 0.00 4.79
324 325 0.964358 CTCGTCGTACTCACCCCCTT 60.964 60.000 0.00 0.00 0.00 3.95
325 326 0.962356 TCGTCGTACTCACCCCCTTC 60.962 60.000 0.00 0.00 0.00 3.46
326 327 0.964358 CGTCGTACTCACCCCCTTCT 60.964 60.000 0.00 0.00 0.00 2.85
327 328 0.816373 GTCGTACTCACCCCCTTCTC 59.184 60.000 0.00 0.00 0.00 2.87
328 329 0.324091 TCGTACTCACCCCCTTCTCC 60.324 60.000 0.00 0.00 0.00 3.71
329 330 0.324460 CGTACTCACCCCCTTCTCCT 60.324 60.000 0.00 0.00 0.00 3.69
330 331 1.895866 CGTACTCACCCCCTTCTCCTT 60.896 57.143 0.00 0.00 0.00 3.36
331 332 1.832366 GTACTCACCCCCTTCTCCTTC 59.168 57.143 0.00 0.00 0.00 3.46
332 333 0.193574 ACTCACCCCCTTCTCCTTCA 59.806 55.000 0.00 0.00 0.00 3.02
333 334 1.203492 ACTCACCCCCTTCTCCTTCAT 60.203 52.381 0.00 0.00 0.00 2.57
334 335 1.488393 CTCACCCCCTTCTCCTTCATC 59.512 57.143 0.00 0.00 0.00 2.92
335 336 1.203428 TCACCCCCTTCTCCTTCATCA 60.203 52.381 0.00 0.00 0.00 3.07
336 337 1.065126 CACCCCCTTCTCCTTCATCAC 60.065 57.143 0.00 0.00 0.00 3.06
337 338 1.289160 CCCCCTTCTCCTTCATCACA 58.711 55.000 0.00 0.00 0.00 3.58
338 339 1.849039 CCCCCTTCTCCTTCATCACAT 59.151 52.381 0.00 0.00 0.00 3.21
339 340 2.422519 CCCCCTTCTCCTTCATCACATG 60.423 54.545 0.00 0.00 0.00 3.21
340 341 2.240667 CCCCTTCTCCTTCATCACATGT 59.759 50.000 0.00 0.00 0.00 3.21
341 342 3.276857 CCCTTCTCCTTCATCACATGTG 58.723 50.000 20.18 20.18 0.00 3.21
342 343 3.276857 CCTTCTCCTTCATCACATGTGG 58.723 50.000 25.16 10.72 0.00 4.17
343 344 2.408271 TCTCCTTCATCACATGTGGC 57.592 50.000 25.16 0.00 0.00 5.01
344 345 1.911357 TCTCCTTCATCACATGTGGCT 59.089 47.619 25.16 10.73 0.00 4.75
345 346 2.093288 TCTCCTTCATCACATGTGGCTC 60.093 50.000 25.16 0.00 0.00 4.70
346 347 1.012086 CCTTCATCACATGTGGCTCG 58.988 55.000 25.16 11.42 0.00 5.03
347 348 0.376152 CTTCATCACATGTGGCTCGC 59.624 55.000 25.16 0.00 0.00 5.03
348 349 0.036105 TTCATCACATGTGGCTCGCT 60.036 50.000 25.16 1.58 0.00 4.93
349 350 0.460811 TCATCACATGTGGCTCGCTC 60.461 55.000 25.16 0.00 0.00 5.03
350 351 0.741927 CATCACATGTGGCTCGCTCA 60.742 55.000 25.16 3.98 0.00 4.26
351 352 0.742281 ATCACATGTGGCTCGCTCAC 60.742 55.000 25.16 4.31 35.82 3.51
353 354 1.669115 ACATGTGGCTCGCTCACAC 60.669 57.895 12.95 3.41 46.19 3.82
354 355 2.433145 ATGTGGCTCGCTCACACG 60.433 61.111 12.95 0.00 46.19 4.49
360 361 3.168604 CTCGCTCACACGCACGAG 61.169 66.667 0.00 0.00 45.02 4.18
371 372 4.122515 GCACGAGCGACGAAGCAC 62.123 66.667 12.62 2.58 45.77 4.40
387 388 4.766088 ACGCCCGCGACGTTAGTC 62.766 66.667 19.17 0.00 41.93 2.59
388 389 4.471726 CGCCCGCGACGTTAGTCT 62.472 66.667 8.23 0.00 44.93 3.24
389 390 2.126189 GCCCGCGACGTTAGTCTT 60.126 61.111 8.23 0.00 44.93 3.01
390 391 2.442188 GCCCGCGACGTTAGTCTTG 61.442 63.158 8.23 0.00 44.93 3.02
391 392 2.442188 CCCGCGACGTTAGTCTTGC 61.442 63.158 8.23 0.00 44.93 4.01
392 393 1.443872 CCGCGACGTTAGTCTTGCT 60.444 57.895 8.23 0.00 44.93 3.91
393 394 1.007336 CCGCGACGTTAGTCTTGCTT 61.007 55.000 8.23 0.00 44.93 3.91
394 395 0.091344 CGCGACGTTAGTCTTGCTTG 59.909 55.000 0.00 0.00 44.93 4.01
395 396 1.137513 GCGACGTTAGTCTTGCTTGT 58.862 50.000 0.00 0.00 44.93 3.16
396 397 1.124477 GCGACGTTAGTCTTGCTTGTC 59.876 52.381 0.00 0.00 44.93 3.18
397 398 1.382419 CGACGTTAGTCTTGCTTGTCG 59.618 52.381 0.00 0.00 44.93 4.35
398 399 2.391879 GACGTTAGTCTTGCTTGTCGT 58.608 47.619 0.00 0.00 43.80 4.34
399 400 3.558505 GACGTTAGTCTTGCTTGTCGTA 58.441 45.455 0.00 0.00 43.80 3.43
400 401 3.562505 ACGTTAGTCTTGCTTGTCGTAG 58.437 45.455 0.00 0.00 0.00 3.51
401 402 3.251729 ACGTTAGTCTTGCTTGTCGTAGA 59.748 43.478 0.00 0.00 0.00 2.59
402 403 4.224433 CGTTAGTCTTGCTTGTCGTAGAA 58.776 43.478 0.00 0.00 39.69 2.10
403 404 4.088213 CGTTAGTCTTGCTTGTCGTAGAAC 59.912 45.833 0.00 0.00 39.69 3.01
404 405 3.027974 AGTCTTGCTTGTCGTAGAACC 57.972 47.619 0.00 0.00 39.69 3.62
405 406 2.364324 AGTCTTGCTTGTCGTAGAACCA 59.636 45.455 0.00 0.00 39.69 3.67
406 407 2.475487 GTCTTGCTTGTCGTAGAACCAC 59.525 50.000 0.00 0.00 39.69 4.16
407 408 2.101750 TCTTGCTTGTCGTAGAACCACA 59.898 45.455 0.00 0.00 39.69 4.17
408 409 1.860676 TGCTTGTCGTAGAACCACAC 58.139 50.000 0.00 0.00 39.69 3.82
409 410 1.137282 TGCTTGTCGTAGAACCACACA 59.863 47.619 0.00 0.00 39.69 3.72
410 411 2.224185 TGCTTGTCGTAGAACCACACAT 60.224 45.455 0.00 0.00 39.69 3.21
411 412 2.412089 GCTTGTCGTAGAACCACACATC 59.588 50.000 0.00 0.00 39.69 3.06
412 413 2.736144 TGTCGTAGAACCACACATCC 57.264 50.000 0.00 0.00 39.69 3.51
413 414 2.244695 TGTCGTAGAACCACACATCCT 58.755 47.619 0.00 0.00 39.69 3.24
414 415 3.423749 TGTCGTAGAACCACACATCCTA 58.576 45.455 0.00 0.00 39.69 2.94
415 416 3.442625 TGTCGTAGAACCACACATCCTAG 59.557 47.826 0.00 0.00 39.69 3.02
416 417 3.442977 GTCGTAGAACCACACATCCTAGT 59.557 47.826 0.00 0.00 39.69 2.57
417 418 3.442625 TCGTAGAACCACACATCCTAGTG 59.557 47.826 0.00 0.00 44.93 2.74
421 422 4.963878 CACACATCCTAGTGGGGC 57.036 61.111 0.00 0.00 43.72 5.80
422 423 1.153369 CACACATCCTAGTGGGGCG 60.153 63.158 0.00 0.00 43.72 6.13
423 424 1.305802 ACACATCCTAGTGGGGCGA 60.306 57.895 0.00 0.00 43.72 5.54
424 425 1.330655 ACACATCCTAGTGGGGCGAG 61.331 60.000 0.00 0.00 43.72 5.03
425 426 1.001760 ACATCCTAGTGGGGCGAGT 59.998 57.895 0.00 0.00 35.33 4.18
426 427 0.617820 ACATCCTAGTGGGGCGAGTT 60.618 55.000 0.00 0.00 35.33 3.01
427 428 0.105039 CATCCTAGTGGGGCGAGTTC 59.895 60.000 0.00 0.00 35.33 3.01
428 429 0.032017 ATCCTAGTGGGGCGAGTTCT 60.032 55.000 0.00 0.00 35.33 3.01
429 430 0.683504 TCCTAGTGGGGCGAGTTCTC 60.684 60.000 0.00 0.00 35.33 2.87
430 431 1.433879 CTAGTGGGGCGAGTTCTCG 59.566 63.158 16.47 16.47 0.00 4.04
431 432 2.005960 CTAGTGGGGCGAGTTCTCGG 62.006 65.000 20.97 5.98 0.00 4.63
443 444 3.832704 TTCTCGGCGAACACATGAT 57.167 47.368 12.13 0.00 0.00 2.45
444 445 1.640428 TTCTCGGCGAACACATGATC 58.360 50.000 12.13 0.00 0.00 2.92
445 446 0.525455 TCTCGGCGAACACATGATCG 60.525 55.000 12.13 7.81 42.18 3.69
446 447 0.802222 CTCGGCGAACACATGATCGT 60.802 55.000 12.13 2.68 41.48 3.73
447 448 1.075979 TCGGCGAACACATGATCGTG 61.076 55.000 7.35 13.53 41.48 4.35
448 449 1.715585 GGCGAACACATGATCGTGG 59.284 57.895 18.97 10.25 41.48 4.94
449 450 1.060937 GCGAACACATGATCGTGGC 59.939 57.895 18.97 8.42 41.48 5.01
450 451 1.344837 CGAACACATGATCGTGGCG 59.655 57.895 18.97 11.71 41.38 5.69
451 452 1.715585 GAACACATGATCGTGGCGG 59.284 57.895 18.97 10.28 41.38 6.13
452 453 2.309764 GAACACATGATCGTGGCGGC 62.310 60.000 18.97 0.00 41.38 6.53
453 454 3.928769 CACATGATCGTGGCGGCG 61.929 66.667 18.97 0.51 33.05 6.46
535 536 2.161609 CAGGTTCAAATACCAGCCGTTC 59.838 50.000 0.00 0.00 40.82 3.95
536 537 2.156098 GGTTCAAATACCAGCCGTTCA 58.844 47.619 0.00 0.00 38.12 3.18
539 540 2.695359 TCAAATACCAGCCGTTCAGTC 58.305 47.619 0.00 0.00 0.00 3.51
583 584 4.894114 ACATGGATGACCTACTACCAGTAC 59.106 45.833 0.00 0.00 37.04 2.73
678 684 1.270826 CGCTCAGAGGAAGAGTTGACA 59.729 52.381 0.00 0.00 35.55 3.58
687 693 2.932614 GGAAGAGTTGACATCATGGTCG 59.067 50.000 0.00 0.00 40.72 4.79
693 699 1.725641 TGACATCATGGTCGTGCTTC 58.274 50.000 0.00 0.00 40.72 3.86
707 713 4.410400 CTTCCGAGGCACCCCCAC 62.410 72.222 0.00 0.00 35.39 4.61
712 718 3.315949 GAGGCACCCCCACACGTA 61.316 66.667 0.00 0.00 35.39 3.57
729 735 6.072397 CCACACGTATCATTTAAAAAGGACCA 60.072 38.462 0.00 0.00 30.94 4.02
732 738 6.905076 CACGTATCATTTAAAAAGGACCATCG 59.095 38.462 0.00 0.00 30.94 3.84
752 758 0.323629 TGTGGTAGTTGGGTAGCTGC 59.676 55.000 0.00 0.00 0.00 5.25
835 3164 7.921214 TGTGGACGCAAACTTGATTTAAATTTA 59.079 29.630 1.43 0.00 0.00 1.40
836 3165 8.921670 GTGGACGCAAACTTGATTTAAATTTAT 58.078 29.630 1.43 0.00 0.00 1.40
890 3219 2.467566 ATAAGTCGTGGTGTTGGGTC 57.532 50.000 0.00 0.00 0.00 4.46
891 3220 1.121378 TAAGTCGTGGTGTTGGGTCA 58.879 50.000 0.00 0.00 0.00 4.02
905 5538 1.288633 TGGGTCATGATTTCTGCCCAT 59.711 47.619 14.01 0.00 40.82 4.00
906 5539 1.684983 GGGTCATGATTTCTGCCCATG 59.315 52.381 11.09 0.00 39.08 3.66
908 5541 1.068127 GTCATGATTTCTGCCCATGCC 59.932 52.381 0.00 0.00 37.99 4.40
916 6981 1.529948 CTGCCCATGCCGATCCAAT 60.530 57.895 0.00 0.00 36.33 3.16
1126 7191 0.321653 CGTTTCTCCCCAGGGTGAAG 60.322 60.000 17.29 6.41 44.96 3.02
1316 7382 0.883370 AACCGACGAGCCAGGTTTTC 60.883 55.000 0.00 0.00 45.04 2.29
1327 7393 1.566231 CCAGGTTTTCCCCTATCTGCT 59.434 52.381 0.00 0.00 41.86 4.24
1328 7394 2.024941 CCAGGTTTTCCCCTATCTGCTT 60.025 50.000 0.00 0.00 41.86 3.91
1366 7432 1.371183 CTGCGAAGTCCCCAACTGA 59.629 57.895 0.00 0.00 38.58 3.41
1412 7478 6.823182 TGATGTGATTACGTCTGATTGGAATT 59.177 34.615 10.81 0.00 42.21 2.17
1496 7566 3.354089 AGTTGAAACTGCAATTCACCG 57.646 42.857 12.72 0.00 37.98 4.94
1563 7633 5.766174 ACAGTTTATTTTCCGGCAGTTTAGA 59.234 36.000 0.00 0.00 0.00 2.10
1596 7668 5.422650 AGCTATTAGGCCAGCTATAACTACC 59.577 44.000 13.39 0.00 46.14 3.18
1631 7703 5.416083 TGCATTACACTAGTACCACATGTC 58.584 41.667 0.00 0.00 0.00 3.06
1639 7711 5.810587 CACTAGTACCACATGTCCACATTAC 59.189 44.000 0.00 0.00 33.61 1.89
1643 7715 3.838565 ACCACATGTCCACATTACCAAA 58.161 40.909 0.00 0.00 33.61 3.28
1673 7745 4.448537 TTTTGTTGTTGTGCTAACTGCT 57.551 36.364 6.10 0.00 43.37 4.24
1699 7771 1.639298 GCAGGCCTCGCTGTTACTTG 61.639 60.000 16.95 0.00 0.00 3.16
1733 7805 7.566760 TTCTGAATGCTCACTTTAGAAAACA 57.433 32.000 0.00 0.00 0.00 2.83
1734 7806 7.750229 TCTGAATGCTCACTTTAGAAAACAT 57.250 32.000 0.00 0.00 0.00 2.71
1775 7847 8.506168 TTTTCTCTTCACTTGATGTTAACAGT 57.494 30.769 14.65 3.43 0.00 3.55
1956 8028 7.628769 TGCTATTGATTTTGCAGACTATCAA 57.371 32.000 13.55 13.55 40.21 2.57
1972 8044 8.295288 CAGACTATCAAATCCTTAAATCATGCC 58.705 37.037 0.00 0.00 0.00 4.40
2022 8094 9.556030 GTATTTACTGGATTCTGTTTTGTTAGC 57.444 33.333 0.00 0.00 0.00 3.09
2184 8256 1.127951 GTCGCACATTTAGGTGGAACG 59.872 52.381 0.00 0.00 39.19 3.95
2517 8595 8.146053 TCCCTCCGATACATATTTATTGTCAT 57.854 34.615 0.00 0.00 0.00 3.06
2590 8735 4.883585 ACATGTAGGATAAGTGGCATGTTG 59.116 41.667 0.00 0.00 42.59 3.33
2604 8749 5.645497 GTGGCATGTTGTATTTCTCTCTCTT 59.355 40.000 0.00 0.00 0.00 2.85
2683 8828 0.517316 GCAAAGCAGTTCCTACCACG 59.483 55.000 0.00 0.00 0.00 4.94
2685 8830 0.396811 AAAGCAGTTCCTACCACGCT 59.603 50.000 0.00 0.00 0.00 5.07
2816 8961 0.564171 TGTATATCCACCCCCGTCCT 59.436 55.000 0.00 0.00 0.00 3.85
2963 9108 9.994432 GTCATTCAGAACTATGGAAATGTTAAG 57.006 33.333 0.00 0.00 0.00 1.85
3014 9159 6.644248 TCATTTTCCTGGATTGAGCATATG 57.356 37.500 0.00 0.00 0.00 1.78
3029 9174 9.710900 ATTGAGCATATGATATTCTGTTCGTTA 57.289 29.630 6.97 0.00 0.00 3.18
3179 9384 6.690194 TGATCTACGGAACTACTTTCTACC 57.310 41.667 0.00 0.00 34.26 3.18
3180 9385 6.421485 TGATCTACGGAACTACTTTCTACCT 58.579 40.000 0.00 0.00 34.26 3.08
3181 9386 6.888632 TGATCTACGGAACTACTTTCTACCTT 59.111 38.462 0.00 0.00 34.26 3.50
3182 9387 8.049117 TGATCTACGGAACTACTTTCTACCTTA 58.951 37.037 0.00 0.00 34.26 2.69
3183 9388 8.814038 ATCTACGGAACTACTTTCTACCTTAA 57.186 34.615 0.00 0.00 34.26 1.85
3184 9389 8.814038 TCTACGGAACTACTTTCTACCTTAAT 57.186 34.615 0.00 0.00 34.26 1.40
3185 9390 8.897752 TCTACGGAACTACTTTCTACCTTAATC 58.102 37.037 0.00 0.00 34.26 1.75
3186 9391 6.871844 ACGGAACTACTTTCTACCTTAATCC 58.128 40.000 0.00 0.00 34.26 3.01
3187 9392 6.438425 ACGGAACTACTTTCTACCTTAATCCA 59.562 38.462 0.00 0.00 34.26 3.41
3188 9393 6.979238 CGGAACTACTTTCTACCTTAATCCAG 59.021 42.308 0.00 0.00 34.26 3.86
3189 9394 7.363617 CGGAACTACTTTCTACCTTAATCCAGT 60.364 40.741 0.00 0.00 34.26 4.00
3190 9395 8.319881 GGAACTACTTTCTACCTTAATCCAGTT 58.680 37.037 0.00 0.00 34.26 3.16
3191 9396 9.368674 GAACTACTTTCTACCTTAATCCAGTTC 57.631 37.037 0.00 0.00 32.84 3.01
3192 9397 8.431910 ACTACTTTCTACCTTAATCCAGTTCA 57.568 34.615 0.00 0.00 0.00 3.18
3193 9398 8.532819 ACTACTTTCTACCTTAATCCAGTTCAG 58.467 37.037 0.00 0.00 0.00 3.02
3194 9399 6.174049 ACTTTCTACCTTAATCCAGTTCAGC 58.826 40.000 0.00 0.00 0.00 4.26
3195 9400 5.755409 TTCTACCTTAATCCAGTTCAGCA 57.245 39.130 0.00 0.00 0.00 4.41
3196 9401 5.344743 TCTACCTTAATCCAGTTCAGCAG 57.655 43.478 0.00 0.00 0.00 4.24
3197 9402 4.777896 TCTACCTTAATCCAGTTCAGCAGT 59.222 41.667 0.00 0.00 0.00 4.40
3198 9403 5.955959 TCTACCTTAATCCAGTTCAGCAGTA 59.044 40.000 0.00 0.00 0.00 2.74
3199 9404 5.091261 ACCTTAATCCAGTTCAGCAGTAG 57.909 43.478 0.00 0.00 0.00 2.57
3200 9405 3.873952 CCTTAATCCAGTTCAGCAGTAGC 59.126 47.826 0.00 0.00 42.56 3.58
3201 9406 4.507710 CTTAATCCAGTTCAGCAGTAGCA 58.492 43.478 0.00 0.00 45.49 3.49
3202 9407 3.423539 AATCCAGTTCAGCAGTAGCAA 57.576 42.857 0.00 0.00 45.49 3.91
3203 9408 2.462456 TCCAGTTCAGCAGTAGCAAG 57.538 50.000 0.00 0.00 45.49 4.01
3204 9409 0.801251 CCAGTTCAGCAGTAGCAAGC 59.199 55.000 0.00 0.00 45.49 4.01
3205 9410 0.801251 CAGTTCAGCAGTAGCAAGCC 59.199 55.000 0.00 0.00 45.49 4.35
3206 9411 0.689623 AGTTCAGCAGTAGCAAGCCT 59.310 50.000 0.00 0.00 45.49 4.58
3207 9412 1.072965 AGTTCAGCAGTAGCAAGCCTT 59.927 47.619 0.00 0.00 45.49 4.35
3208 9413 1.882623 GTTCAGCAGTAGCAAGCCTTT 59.117 47.619 0.00 0.00 45.49 3.11
3209 9414 1.527034 TCAGCAGTAGCAAGCCTTTG 58.473 50.000 0.00 0.00 45.49 2.77
3210 9415 1.202806 TCAGCAGTAGCAAGCCTTTGT 60.203 47.619 0.00 0.00 45.49 2.83
3211 9416 1.610522 CAGCAGTAGCAAGCCTTTGTT 59.389 47.619 0.00 0.00 45.49 2.83
3212 9417 2.813754 CAGCAGTAGCAAGCCTTTGTTA 59.186 45.455 0.00 0.00 45.49 2.41
3213 9418 3.441572 CAGCAGTAGCAAGCCTTTGTTAT 59.558 43.478 0.00 0.00 45.49 1.89
3214 9419 3.691609 AGCAGTAGCAAGCCTTTGTTATC 59.308 43.478 0.00 0.00 45.49 1.75
3215 9420 3.181496 GCAGTAGCAAGCCTTTGTTATCC 60.181 47.826 0.00 0.00 41.58 2.59
3216 9421 4.265073 CAGTAGCAAGCCTTTGTTATCCT 58.735 43.478 0.00 0.00 36.65 3.24
3217 9422 4.095483 CAGTAGCAAGCCTTTGTTATCCTG 59.905 45.833 0.00 0.00 36.65 3.86
3218 9423 3.160679 AGCAAGCCTTTGTTATCCTGT 57.839 42.857 0.00 0.00 36.65 4.00
3219 9424 3.500343 AGCAAGCCTTTGTTATCCTGTT 58.500 40.909 0.00 0.00 36.65 3.16
3220 9425 3.256631 AGCAAGCCTTTGTTATCCTGTTG 59.743 43.478 0.00 0.00 36.65 3.33
3221 9426 3.614870 GCAAGCCTTTGTTATCCTGTTGG 60.615 47.826 0.00 0.00 36.65 3.77
3222 9427 5.825660 GCAAGCCTTTGTTATCCTGTTGGA 61.826 45.833 0.00 0.00 40.52 3.53
3223 9428 4.112634 AGCCTTTGTTATCCTGTTGGAA 57.887 40.909 0.00 0.00 46.80 3.53
3224 9429 4.082125 AGCCTTTGTTATCCTGTTGGAAG 58.918 43.478 0.00 0.00 46.80 3.46
3225 9430 3.367395 GCCTTTGTTATCCTGTTGGAAGC 60.367 47.826 0.00 0.00 46.80 3.86
3226 9431 4.082125 CCTTTGTTATCCTGTTGGAAGCT 58.918 43.478 0.00 0.00 46.80 3.74
3227 9432 4.082571 CCTTTGTTATCCTGTTGGAAGCTG 60.083 45.833 0.00 0.00 46.80 4.24
3228 9433 2.436417 TGTTATCCTGTTGGAAGCTGC 58.564 47.619 0.00 0.00 46.80 5.25
3229 9434 2.040278 TGTTATCCTGTTGGAAGCTGCT 59.960 45.455 0.00 0.00 46.80 4.24
3230 9435 2.408271 TATCCTGTTGGAAGCTGCTG 57.592 50.000 1.35 0.00 46.80 4.41
3231 9436 0.964358 ATCCTGTTGGAAGCTGCTGC 60.964 55.000 1.35 7.62 46.80 5.25
3232 9437 1.900016 CCTGTTGGAAGCTGCTGCA 60.900 57.895 18.42 0.88 37.28 4.41
3233 9438 1.457823 CCTGTTGGAAGCTGCTGCAA 61.458 55.000 18.42 6.00 37.28 4.08
3234 9439 0.318445 CTGTTGGAAGCTGCTGCAAC 60.318 55.000 18.42 20.65 45.07 4.17
3280 9485 8.382030 TCTTATATTCAACGCATTGTGATGAT 57.618 30.769 10.46 4.91 37.11 2.45
3412 9618 6.861144 AGGTTTCTAAAGTAACTAGCCTACG 58.139 40.000 0.00 0.00 0.00 3.51
3517 9725 1.064505 CCAGTTCAGTGCTTGTGTGTG 59.935 52.381 0.00 0.00 0.00 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.636454 TGACCCAAAGTAATCCACTATTCT 57.364 37.500 0.00 0.00 36.04 2.40
1 2 7.696992 TTTGACCCAAAGTAATCCACTATTC 57.303 36.000 0.00 0.00 36.04 1.75
2 3 8.485578 TTTTTGACCCAAAGTAATCCACTATT 57.514 30.769 0.00 0.00 36.04 1.73
31 32 8.422577 ACATGTATGCATCTAGTAATCCACTA 57.577 34.615 0.19 0.00 34.21 2.74
32 33 7.015584 TGACATGTATGCATCTAGTAATCCACT 59.984 37.037 0.19 0.00 35.71 4.00
33 34 7.154656 TGACATGTATGCATCTAGTAATCCAC 58.845 38.462 0.19 0.00 31.99 4.02
34 35 7.301868 TGACATGTATGCATCTAGTAATCCA 57.698 36.000 0.19 0.00 31.99 3.41
35 36 9.307121 GTATGACATGTATGCATCTAGTAATCC 57.693 37.037 0.19 0.00 31.99 3.01
36 37 9.307121 GGTATGACATGTATGCATCTAGTAATC 57.693 37.037 0.19 0.00 31.99 1.75
37 38 9.040259 AGGTATGACATGTATGCATCTAGTAAT 57.960 33.333 0.19 0.00 31.99 1.89
38 39 8.422577 AGGTATGACATGTATGCATCTAGTAA 57.577 34.615 0.19 0.00 31.99 2.24
39 40 9.700831 ATAGGTATGACATGTATGCATCTAGTA 57.299 33.333 0.19 0.00 31.99 1.82
40 41 6.924913 AGGTATGACATGTATGCATCTAGT 57.075 37.500 0.19 0.00 31.99 2.57
41 42 8.473219 ACATAGGTATGACATGTATGCATCTAG 58.527 37.037 0.19 0.00 37.15 2.43
42 43 8.366359 ACATAGGTATGACATGTATGCATCTA 57.634 34.615 0.19 0.00 37.15 1.98
43 44 7.250032 ACATAGGTATGACATGTATGCATCT 57.750 36.000 0.19 0.00 37.15 2.90
44 45 7.148356 CCAACATAGGTATGACATGTATGCATC 60.148 40.741 0.19 0.00 37.15 3.91
45 46 6.656270 CCAACATAGGTATGACATGTATGCAT 59.344 38.462 3.79 3.79 37.15 3.96
46 47 5.997129 CCAACATAGGTATGACATGTATGCA 59.003 40.000 0.00 0.00 37.15 3.96
47 48 5.997746 ACCAACATAGGTATGACATGTATGC 59.002 40.000 0.00 0.00 40.98 3.14
48 49 7.216494 TGACCAACATAGGTATGACATGTATG 58.784 38.462 0.00 0.00 43.38 2.39
49 50 7.373617 TGACCAACATAGGTATGACATGTAT 57.626 36.000 0.00 0.00 43.38 2.29
50 51 6.800072 TGACCAACATAGGTATGACATGTA 57.200 37.500 0.00 0.00 43.38 2.29
51 52 5.692115 TGACCAACATAGGTATGACATGT 57.308 39.130 0.00 0.00 43.38 3.21
52 53 8.853077 ATAATGACCAACATAGGTATGACATG 57.147 34.615 3.96 0.00 43.38 3.21
53 54 9.507329 GAATAATGACCAACATAGGTATGACAT 57.493 33.333 3.96 0.00 43.38 3.06
54 55 8.490311 TGAATAATGACCAACATAGGTATGACA 58.510 33.333 3.96 0.00 43.38 3.58
55 56 8.902540 TGAATAATGACCAACATAGGTATGAC 57.097 34.615 3.96 0.00 43.38 3.06
56 57 8.156820 CCTGAATAATGACCAACATAGGTATGA 58.843 37.037 3.96 0.00 43.38 2.15
57 58 7.939039 ACCTGAATAATGACCAACATAGGTATG 59.061 37.037 0.00 0.00 43.38 2.39
58 59 8.045720 ACCTGAATAATGACCAACATAGGTAT 57.954 34.615 0.00 0.00 43.38 2.73
59 60 7.446106 ACCTGAATAATGACCAACATAGGTA 57.554 36.000 0.00 0.00 43.38 3.08
60 61 6.327386 ACCTGAATAATGACCAACATAGGT 57.673 37.500 0.00 0.00 46.82 3.08
61 62 6.263168 GGAACCTGAATAATGACCAACATAGG 59.737 42.308 0.00 0.00 38.38 2.57
62 63 6.828273 TGGAACCTGAATAATGACCAACATAG 59.172 38.462 0.00 0.00 38.38 2.23
63 64 6.601613 GTGGAACCTGAATAATGACCAACATA 59.398 38.462 0.00 0.00 38.38 2.29
64 65 5.418840 GTGGAACCTGAATAATGACCAACAT 59.581 40.000 0.00 0.00 41.45 2.71
65 66 4.764823 GTGGAACCTGAATAATGACCAACA 59.235 41.667 0.00 0.00 0.00 3.33
66 67 5.310720 GTGGAACCTGAATAATGACCAAC 57.689 43.478 0.00 0.00 0.00 3.77
82 83 4.920927 CCATACGAAAAACAATGGTGGAAC 59.079 41.667 0.00 0.00 35.23 3.62
83 84 5.127693 CCATACGAAAAACAATGGTGGAA 57.872 39.130 0.00 0.00 35.23 3.53
84 85 4.775058 CCATACGAAAAACAATGGTGGA 57.225 40.909 0.00 0.00 35.23 4.02
90 91 9.308318 GGCATATTTTACCATACGAAAAACAAT 57.692 29.630 0.00 0.00 0.00 2.71
91 92 8.524487 AGGCATATTTTACCATACGAAAAACAA 58.476 29.630 0.00 0.00 0.00 2.83
92 93 8.057536 AGGCATATTTTACCATACGAAAAACA 57.942 30.769 0.00 0.00 0.00 2.83
95 96 8.788806 CCATAGGCATATTTTACCATACGAAAA 58.211 33.333 0.00 0.00 0.00 2.29
96 97 8.158132 TCCATAGGCATATTTTACCATACGAAA 58.842 33.333 0.00 0.00 0.00 3.46
97 98 7.681679 TCCATAGGCATATTTTACCATACGAA 58.318 34.615 0.00 0.00 0.00 3.85
98 99 7.247456 TCCATAGGCATATTTTACCATACGA 57.753 36.000 0.00 0.00 0.00 3.43
99 100 9.778741 ATATCCATAGGCATATTTTACCATACG 57.221 33.333 0.00 0.00 0.00 3.06
102 103 9.632638 GTCATATCCATAGGCATATTTTACCAT 57.367 33.333 0.00 0.00 0.00 3.55
103 104 8.610369 TGTCATATCCATAGGCATATTTTACCA 58.390 33.333 0.00 0.00 0.00 3.25
104 105 8.893727 GTGTCATATCCATAGGCATATTTTACC 58.106 37.037 0.00 0.00 0.00 2.85
105 106 9.672673 AGTGTCATATCCATAGGCATATTTTAC 57.327 33.333 0.00 0.00 0.00 2.01
106 107 9.671279 CAGTGTCATATCCATAGGCATATTTTA 57.329 33.333 0.00 0.00 0.00 1.52
107 108 7.613022 CCAGTGTCATATCCATAGGCATATTTT 59.387 37.037 0.00 0.00 0.00 1.82
108 109 7.114754 CCAGTGTCATATCCATAGGCATATTT 58.885 38.462 0.00 0.00 0.00 1.40
109 110 6.656902 CCAGTGTCATATCCATAGGCATATT 58.343 40.000 0.00 0.00 0.00 1.28
110 111 5.397221 GCCAGTGTCATATCCATAGGCATAT 60.397 44.000 0.00 0.00 35.75 1.78
111 112 4.080919 GCCAGTGTCATATCCATAGGCATA 60.081 45.833 0.00 0.00 35.75 3.14
112 113 3.307975 GCCAGTGTCATATCCATAGGCAT 60.308 47.826 0.00 0.00 35.75 4.40
113 114 2.038952 GCCAGTGTCATATCCATAGGCA 59.961 50.000 0.00 0.00 35.75 4.75
114 115 2.704572 GCCAGTGTCATATCCATAGGC 58.295 52.381 0.00 0.00 0.00 3.93
115 116 2.354103 CCGCCAGTGTCATATCCATAGG 60.354 54.545 0.00 0.00 0.00 2.57
116 117 2.562738 TCCGCCAGTGTCATATCCATAG 59.437 50.000 0.00 0.00 0.00 2.23
117 118 2.299013 GTCCGCCAGTGTCATATCCATA 59.701 50.000 0.00 0.00 0.00 2.74
118 119 1.070758 GTCCGCCAGTGTCATATCCAT 59.929 52.381 0.00 0.00 0.00 3.41
119 120 0.464036 GTCCGCCAGTGTCATATCCA 59.536 55.000 0.00 0.00 0.00 3.41
120 121 0.597637 CGTCCGCCAGTGTCATATCC 60.598 60.000 0.00 0.00 0.00 2.59
121 122 0.102481 ACGTCCGCCAGTGTCATATC 59.898 55.000 0.00 0.00 0.00 1.63
122 123 0.179111 CACGTCCGCCAGTGTCATAT 60.179 55.000 0.00 0.00 33.97 1.78
123 124 1.214325 CACGTCCGCCAGTGTCATA 59.786 57.895 0.00 0.00 33.97 2.15
124 125 2.048222 CACGTCCGCCAGTGTCAT 60.048 61.111 0.00 0.00 33.97 3.06
125 126 4.293648 CCACGTCCGCCAGTGTCA 62.294 66.667 0.00 0.00 36.69 3.58
126 127 4.295119 ACCACGTCCGCCAGTGTC 62.295 66.667 0.00 0.00 36.69 3.67
127 128 4.602259 CACCACGTCCGCCAGTGT 62.602 66.667 0.00 0.00 36.69 3.55
128 129 4.602259 ACACCACGTCCGCCAGTG 62.602 66.667 0.00 0.00 38.05 3.66
129 130 4.602259 CACACCACGTCCGCCAGT 62.602 66.667 0.00 0.00 0.00 4.00
130 131 3.215597 TACACACCACGTCCGCCAG 62.216 63.158 0.00 0.00 0.00 4.85
131 132 3.215597 CTACACACCACGTCCGCCA 62.216 63.158 0.00 0.00 0.00 5.69
132 133 2.431942 CTACACACCACGTCCGCC 60.432 66.667 0.00 0.00 0.00 6.13
133 134 3.110178 GCTACACACCACGTCCGC 61.110 66.667 0.00 0.00 0.00 5.54
134 135 1.733041 CAGCTACACACCACGTCCG 60.733 63.158 0.00 0.00 0.00 4.79
135 136 1.374252 CCAGCTACACACCACGTCC 60.374 63.158 0.00 0.00 0.00 4.79
136 137 2.027625 GCCAGCTACACACCACGTC 61.028 63.158 0.00 0.00 0.00 4.34
137 138 2.030562 GCCAGCTACACACCACGT 59.969 61.111 0.00 0.00 0.00 4.49
138 139 3.112075 CGCCAGCTACACACCACG 61.112 66.667 0.00 0.00 0.00 4.94
139 140 2.742372 CCGCCAGCTACACACCAC 60.742 66.667 0.00 0.00 0.00 4.16
140 141 4.697756 GCCGCCAGCTACACACCA 62.698 66.667 0.00 0.00 38.99 4.17
150 151 4.172512 AGCATCAGGAGCCGCCAG 62.173 66.667 0.00 0.00 40.02 4.85
151 152 4.166888 GAGCATCAGGAGCCGCCA 62.167 66.667 0.00 0.00 40.02 5.69
152 153 4.925861 GGAGCATCAGGAGCCGCC 62.926 72.222 0.00 0.00 36.25 6.13
153 154 3.805891 GAGGAGCATCAGGAGCCGC 62.806 68.421 0.00 0.00 36.25 6.53
154 155 2.420890 GAGGAGCATCAGGAGCCG 59.579 66.667 0.00 0.00 36.25 5.52
155 156 1.344191 AAGGAGGAGCATCAGGAGCC 61.344 60.000 0.00 0.00 36.25 4.70
156 157 0.106521 GAAGGAGGAGCATCAGGAGC 59.893 60.000 0.00 0.00 36.25 4.70
157 158 0.388659 CGAAGGAGGAGCATCAGGAG 59.611 60.000 0.00 0.00 36.25 3.69
158 159 2.509512 CGAAGGAGGAGCATCAGGA 58.490 57.895 0.00 0.00 36.25 3.86
172 173 1.815421 ATGCACGCCTAAGCCGAAG 60.815 57.895 0.00 0.00 34.57 3.79
173 174 2.106074 CATGCACGCCTAAGCCGAA 61.106 57.895 0.00 0.00 34.57 4.30
174 175 2.511373 CATGCACGCCTAAGCCGA 60.511 61.111 0.00 0.00 34.57 5.54
175 176 3.576356 CCATGCACGCCTAAGCCG 61.576 66.667 0.00 0.00 34.57 5.52
176 177 3.211963 CCCATGCACGCCTAAGCC 61.212 66.667 0.00 0.00 34.57 4.35
177 178 2.124736 TCCCATGCACGCCTAAGC 60.125 61.111 0.00 0.00 0.00 3.09
178 179 2.182842 GCTCCCATGCACGCCTAAG 61.183 63.158 0.00 0.00 0.00 2.18
179 180 2.124736 GCTCCCATGCACGCCTAA 60.125 61.111 0.00 0.00 0.00 2.69
180 181 2.745308 ATGCTCCCATGCACGCCTA 61.745 57.895 0.00 0.00 46.33 3.93
181 182 4.119363 ATGCTCCCATGCACGCCT 62.119 61.111 0.00 0.00 46.33 5.52
182 183 3.896133 CATGCTCCCATGCACGCC 61.896 66.667 0.00 0.00 46.33 5.68
183 184 3.896133 CCATGCTCCCATGCACGC 61.896 66.667 0.00 0.00 45.97 5.34
184 185 1.721664 CTTCCATGCTCCCATGCACG 61.722 60.000 0.00 0.00 45.97 5.34
185 186 0.682209 ACTTCCATGCTCCCATGCAC 60.682 55.000 0.00 0.00 45.97 4.57
186 187 0.394762 GACTTCCATGCTCCCATGCA 60.395 55.000 0.00 0.00 45.97 3.96
187 188 1.105759 GGACTTCCATGCTCCCATGC 61.106 60.000 0.00 0.00 45.97 4.06
188 189 0.256752 TGGACTTCCATGCTCCCATG 59.743 55.000 0.00 0.00 46.70 3.66
189 190 2.713967 TGGACTTCCATGCTCCCAT 58.286 52.632 0.00 0.00 42.01 4.00
190 191 4.248908 TGGACTTCCATGCTCCCA 57.751 55.556 0.00 0.00 42.01 4.37
198 199 0.320374 GACATGGACGTGGACTTCCA 59.680 55.000 7.40 7.40 46.37 3.53
199 200 0.608640 AGACATGGACGTGGACTTCC 59.391 55.000 0.00 0.00 35.10 3.46
200 201 1.714794 CAGACATGGACGTGGACTTC 58.285 55.000 0.00 0.00 0.00 3.01
201 202 0.320771 GCAGACATGGACGTGGACTT 60.321 55.000 0.00 0.00 0.00 3.01
202 203 1.293498 GCAGACATGGACGTGGACT 59.707 57.895 0.00 0.00 0.00 3.85
203 204 1.741770 GGCAGACATGGACGTGGAC 60.742 63.158 0.00 0.00 0.00 4.02
204 205 2.662596 GGCAGACATGGACGTGGA 59.337 61.111 0.00 0.00 0.00 4.02
205 206 2.436646 GGGCAGACATGGACGTGG 60.437 66.667 0.00 0.00 0.00 4.94
206 207 2.436646 GGGGCAGACATGGACGTG 60.437 66.667 0.00 0.00 0.00 4.49
207 208 2.927856 TGGGGCAGACATGGACGT 60.928 61.111 0.00 0.00 0.00 4.34
208 209 1.613317 TAGTGGGGCAGACATGGACG 61.613 60.000 0.00 0.00 0.00 4.79
209 210 0.179000 CTAGTGGGGCAGACATGGAC 59.821 60.000 0.00 0.00 0.00 4.02
210 211 1.626356 GCTAGTGGGGCAGACATGGA 61.626 60.000 0.00 0.00 0.00 3.41
211 212 1.153086 GCTAGTGGGGCAGACATGG 60.153 63.158 0.00 0.00 0.00 3.66
212 213 1.153086 GGCTAGTGGGGCAGACATG 60.153 63.158 0.00 0.00 0.00 3.21
213 214 2.378634 GGGCTAGTGGGGCAGACAT 61.379 63.158 0.00 0.00 0.00 3.06
214 215 3.009115 GGGCTAGTGGGGCAGACA 61.009 66.667 0.00 0.00 0.00 3.41
215 216 2.689034 AGGGCTAGTGGGGCAGAC 60.689 66.667 0.00 0.00 0.00 3.51
216 217 2.688666 CAGGGCTAGTGGGGCAGA 60.689 66.667 0.00 0.00 0.00 4.26
217 218 2.688666 TCAGGGCTAGTGGGGCAG 60.689 66.667 0.00 0.00 0.00 4.85
218 219 2.688666 CTCAGGGCTAGTGGGGCA 60.689 66.667 0.00 0.00 0.00 5.36
219 220 4.182433 GCTCAGGGCTAGTGGGGC 62.182 72.222 0.00 0.00 38.06 5.80
220 221 3.854669 CGCTCAGGGCTAGTGGGG 61.855 72.222 0.00 0.00 39.13 4.96
221 222 4.537433 GCGCTCAGGGCTAGTGGG 62.537 72.222 6.43 0.00 38.48 4.61
222 223 4.537433 GGCGCTCAGGGCTAGTGG 62.537 72.222 14.24 0.00 41.33 4.00
223 224 2.599645 ATTGGCGCTCAGGGCTAGTG 62.600 60.000 14.24 0.00 41.33 2.74
224 225 1.048724 TATTGGCGCTCAGGGCTAGT 61.049 55.000 14.24 7.02 41.33 2.57
225 226 0.320247 CTATTGGCGCTCAGGGCTAG 60.320 60.000 14.24 3.92 41.33 3.42
226 227 1.748403 CTATTGGCGCTCAGGGCTA 59.252 57.895 14.24 4.28 41.33 3.93
227 228 2.507944 CTATTGGCGCTCAGGGCT 59.492 61.111 14.24 0.00 41.33 5.19
228 229 3.282920 GCTATTGGCGCTCAGGGC 61.283 66.667 7.64 4.80 40.84 5.19
229 230 1.890979 CTGCTATTGGCGCTCAGGG 60.891 63.158 7.64 0.00 45.43 4.45
230 231 1.890979 CCTGCTATTGGCGCTCAGG 60.891 63.158 7.64 10.68 45.43 3.86
231 232 1.890979 CCCTGCTATTGGCGCTCAG 60.891 63.158 7.64 5.45 45.43 3.35
232 233 2.190313 CCCTGCTATTGGCGCTCA 59.810 61.111 7.64 0.00 45.43 4.26
233 234 3.282920 GCCCTGCTATTGGCGCTC 61.283 66.667 7.64 0.00 45.43 5.03
238 239 1.098050 GTGACTTGCCCTGCTATTGG 58.902 55.000 0.00 0.00 0.00 3.16
239 240 1.741706 CAGTGACTTGCCCTGCTATTG 59.258 52.381 0.00 0.00 0.00 1.90
240 241 1.952367 GCAGTGACTTGCCCTGCTATT 60.952 52.381 0.00 0.00 46.23 1.73
241 242 0.393537 GCAGTGACTTGCCCTGCTAT 60.394 55.000 0.00 0.00 46.23 2.97
242 243 1.003355 GCAGTGACTTGCCCTGCTA 60.003 57.895 0.00 0.00 46.23 3.49
243 244 2.282040 GCAGTGACTTGCCCTGCT 60.282 61.111 0.00 0.00 46.23 4.24
244 245 3.730761 CGCAGTGACTTGCCCTGC 61.731 66.667 0.00 0.00 46.25 4.85
245 246 3.730761 GCGCAGTGACTTGCCCTG 61.731 66.667 0.30 0.00 41.01 4.45
248 249 3.782244 CTCGCGCAGTGACTTGCC 61.782 66.667 8.75 0.00 44.70 4.52
249 250 4.436448 GCTCGCGCAGTGACTTGC 62.436 66.667 8.75 0.00 44.70 4.01
250 251 2.724708 GAGCTCGCGCAGTGACTTG 61.725 63.158 8.75 0.00 44.70 3.16
251 252 2.431601 GAGCTCGCGCAGTGACTT 60.432 61.111 8.75 0.00 44.70 3.01
252 253 3.623486 CTGAGCTCGCGCAGTGACT 62.623 63.158 8.75 0.00 44.70 3.41
253 254 3.177920 CTGAGCTCGCGCAGTGAC 61.178 66.667 8.75 0.00 44.70 3.67
272 273 3.898509 CTCGAGGCCTCAGAGCGG 61.899 72.222 31.67 14.73 0.00 5.52
273 274 3.898509 CCTCGAGGCCTCAGAGCG 61.899 72.222 32.12 25.02 32.74 5.03
274 275 3.535962 CCCTCGAGGCCTCAGAGC 61.536 72.222 32.12 12.42 32.74 4.09
275 276 2.043450 ACCCTCGAGGCCTCAGAG 60.043 66.667 31.26 31.26 40.58 3.35
276 277 2.043852 GACCCTCGAGGCCTCAGA 60.044 66.667 31.67 25.59 40.58 3.27
277 278 2.043450 AGACCCTCGAGGCCTCAG 60.043 66.667 31.67 24.78 40.58 3.35
278 279 2.363018 CAGACCCTCGAGGCCTCA 60.363 66.667 31.67 17.65 40.58 3.86
279 280 3.844090 GCAGACCCTCGAGGCCTC 61.844 72.222 26.87 23.79 40.58 4.70
280 281 3.914551 AAGCAGACCCTCGAGGCCT 62.915 63.158 26.87 20.71 40.58 5.19
281 282 3.394836 AAGCAGACCCTCGAGGCC 61.395 66.667 26.87 18.78 40.58 5.19
282 283 2.125350 CAAGCAGACCCTCGAGGC 60.125 66.667 26.87 14.15 40.58 4.70
283 284 1.515020 CTCAAGCAGACCCTCGAGG 59.485 63.158 25.36 25.36 43.78 4.63
284 285 1.515020 CCTCAAGCAGACCCTCGAG 59.485 63.158 5.13 5.13 0.00 4.04
285 286 1.984570 CCCTCAAGCAGACCCTCGA 60.985 63.158 0.00 0.00 0.00 4.04
286 287 2.581354 CCCTCAAGCAGACCCTCG 59.419 66.667 0.00 0.00 0.00 4.63
287 288 2.270527 GCCCTCAAGCAGACCCTC 59.729 66.667 0.00 0.00 0.00 4.30
288 289 3.334054 GGCCCTCAAGCAGACCCT 61.334 66.667 0.00 0.00 0.00 4.34
289 290 3.334054 AGGCCCTCAAGCAGACCC 61.334 66.667 0.00 0.00 0.00 4.46
290 291 2.270527 GAGGCCCTCAAGCAGACC 59.729 66.667 5.69 0.00 0.00 3.85
291 292 2.125350 CGAGGCCCTCAAGCAGAC 60.125 66.667 12.13 0.00 0.00 3.51
292 293 2.604686 ACGAGGCCCTCAAGCAGA 60.605 61.111 12.13 0.00 0.00 4.26
293 294 2.125350 GACGAGGCCCTCAAGCAG 60.125 66.667 12.13 0.00 0.00 4.24
294 295 4.069232 CGACGAGGCCCTCAAGCA 62.069 66.667 12.13 0.00 0.00 3.91
295 296 2.707849 TACGACGAGGCCCTCAAGC 61.708 63.158 12.13 0.00 0.00 4.01
296 297 1.139095 GTACGACGAGGCCCTCAAG 59.861 63.158 12.13 3.56 0.00 3.02
297 298 1.303888 AGTACGACGAGGCCCTCAA 60.304 57.895 12.13 0.00 0.00 3.02
298 299 1.748122 GAGTACGACGAGGCCCTCA 60.748 63.158 12.13 0.00 0.00 3.86
299 300 1.748122 TGAGTACGACGAGGCCCTC 60.748 63.158 0.00 0.00 0.00 4.30
300 301 2.045131 GTGAGTACGACGAGGCCCT 61.045 63.158 0.00 0.00 0.00 5.19
301 302 2.488820 GTGAGTACGACGAGGCCC 59.511 66.667 0.00 0.00 0.00 5.80
302 303 2.488820 GGTGAGTACGACGAGGCC 59.511 66.667 0.00 0.00 0.00 5.19
303 304 2.488820 GGGTGAGTACGACGAGGC 59.511 66.667 0.00 0.00 0.00 4.70
304 305 2.413142 GGGGGTGAGTACGACGAGG 61.413 68.421 0.00 0.00 0.00 4.63
305 306 0.964358 AAGGGGGTGAGTACGACGAG 60.964 60.000 0.00 0.00 0.00 4.18
306 307 0.962356 GAAGGGGGTGAGTACGACGA 60.962 60.000 0.00 0.00 0.00 4.20
307 308 0.964358 AGAAGGGGGTGAGTACGACG 60.964 60.000 0.00 0.00 0.00 5.12
308 309 0.816373 GAGAAGGGGGTGAGTACGAC 59.184 60.000 0.00 0.00 0.00 4.34
309 310 0.324091 GGAGAAGGGGGTGAGTACGA 60.324 60.000 0.00 0.00 0.00 3.43
310 311 0.324460 AGGAGAAGGGGGTGAGTACG 60.324 60.000 0.00 0.00 0.00 3.67
311 312 1.832366 GAAGGAGAAGGGGGTGAGTAC 59.168 57.143 0.00 0.00 0.00 2.73
312 313 1.435563 TGAAGGAGAAGGGGGTGAGTA 59.564 52.381 0.00 0.00 0.00 2.59
313 314 0.193574 TGAAGGAGAAGGGGGTGAGT 59.806 55.000 0.00 0.00 0.00 3.41
314 315 1.488393 GATGAAGGAGAAGGGGGTGAG 59.512 57.143 0.00 0.00 0.00 3.51
315 316 1.203428 TGATGAAGGAGAAGGGGGTGA 60.203 52.381 0.00 0.00 0.00 4.02
316 317 1.065126 GTGATGAAGGAGAAGGGGGTG 60.065 57.143 0.00 0.00 0.00 4.61
317 318 1.290134 GTGATGAAGGAGAAGGGGGT 58.710 55.000 0.00 0.00 0.00 4.95
318 319 1.289160 TGTGATGAAGGAGAAGGGGG 58.711 55.000 0.00 0.00 0.00 5.40
319 320 2.240667 ACATGTGATGAAGGAGAAGGGG 59.759 50.000 0.00 0.00 0.00 4.79
320 321 3.276857 CACATGTGATGAAGGAGAAGGG 58.723 50.000 21.64 0.00 0.00 3.95
321 322 3.276857 CCACATGTGATGAAGGAGAAGG 58.723 50.000 27.46 1.25 33.13 3.46
322 323 2.681848 GCCACATGTGATGAAGGAGAAG 59.318 50.000 27.46 6.68 33.13 2.85
323 324 2.306805 AGCCACATGTGATGAAGGAGAA 59.693 45.455 27.46 0.00 33.13 2.87
324 325 1.911357 AGCCACATGTGATGAAGGAGA 59.089 47.619 27.46 0.00 33.13 3.71
325 326 2.286872 GAGCCACATGTGATGAAGGAG 58.713 52.381 27.46 8.67 33.13 3.69
326 327 1.405933 CGAGCCACATGTGATGAAGGA 60.406 52.381 27.46 0.00 33.13 3.36
327 328 1.012086 CGAGCCACATGTGATGAAGG 58.988 55.000 27.46 10.36 34.00 3.46
328 329 0.376152 GCGAGCCACATGTGATGAAG 59.624 55.000 27.46 14.25 0.00 3.02
329 330 0.036105 AGCGAGCCACATGTGATGAA 60.036 50.000 27.46 0.00 0.00 2.57
330 331 0.460811 GAGCGAGCCACATGTGATGA 60.461 55.000 27.46 0.00 0.00 2.92
331 332 0.741927 TGAGCGAGCCACATGTGATG 60.742 55.000 27.46 12.40 0.00 3.07
332 333 0.742281 GTGAGCGAGCCACATGTGAT 60.742 55.000 27.46 14.99 34.81 3.06
333 334 1.374631 GTGAGCGAGCCACATGTGA 60.375 57.895 27.46 1.05 34.81 3.58
334 335 1.668793 TGTGAGCGAGCCACATGTG 60.669 57.895 19.31 19.31 39.36 3.21
335 336 1.669115 GTGTGAGCGAGCCACATGT 60.669 57.895 17.54 0.00 45.00 3.21
336 337 2.733671 CGTGTGAGCGAGCCACATG 61.734 63.158 17.54 17.59 45.00 3.21
337 338 2.433145 CGTGTGAGCGAGCCACAT 60.433 61.111 17.54 0.00 45.00 3.21
343 344 3.168604 CTCGTGCGTGTGAGCGAG 61.169 66.667 0.00 0.00 43.42 5.03
354 355 4.122515 GTGCTTCGTCGCTCGTGC 62.123 66.667 0.00 0.00 40.80 5.34
355 356 3.816920 CGTGCTTCGTCGCTCGTG 61.817 66.667 12.44 0.00 40.70 4.35
370 371 4.766088 GACTAACGTCGCGGGCGT 62.766 66.667 20.21 20.21 45.07 5.68
371 372 3.958822 AAGACTAACGTCGCGGGCG 62.959 63.158 19.05 19.05 44.93 6.13
372 373 2.126189 AAGACTAACGTCGCGGGC 60.126 61.111 6.13 0.00 44.93 6.13
373 374 2.442188 GCAAGACTAACGTCGCGGG 61.442 63.158 6.13 0.44 44.93 6.13
374 375 1.007336 AAGCAAGACTAACGTCGCGG 61.007 55.000 6.13 0.00 44.93 6.46
375 376 0.091344 CAAGCAAGACTAACGTCGCG 59.909 55.000 0.00 0.00 44.93 5.87
376 377 1.124477 GACAAGCAAGACTAACGTCGC 59.876 52.381 0.00 0.00 44.93 5.19
377 378 1.382419 CGACAAGCAAGACTAACGTCG 59.618 52.381 0.00 0.00 44.93 5.12
378 379 2.391879 ACGACAAGCAAGACTAACGTC 58.608 47.619 0.00 0.00 40.54 4.34
379 380 2.503920 ACGACAAGCAAGACTAACGT 57.496 45.000 0.00 0.00 0.00 3.99
380 381 3.818387 TCTACGACAAGCAAGACTAACG 58.182 45.455 0.00 0.00 0.00 3.18
381 382 4.385146 GGTTCTACGACAAGCAAGACTAAC 59.615 45.833 0.00 0.00 0.00 2.34
382 383 4.038282 TGGTTCTACGACAAGCAAGACTAA 59.962 41.667 0.00 0.00 0.00 2.24
383 384 3.570975 TGGTTCTACGACAAGCAAGACTA 59.429 43.478 0.00 0.00 0.00 2.59
384 385 2.364324 TGGTTCTACGACAAGCAAGACT 59.636 45.455 0.00 0.00 0.00 3.24
385 386 2.475487 GTGGTTCTACGACAAGCAAGAC 59.525 50.000 0.00 0.00 33.22 3.01
386 387 2.101750 TGTGGTTCTACGACAAGCAAGA 59.898 45.455 0.00 0.00 33.90 3.02
387 388 2.221055 GTGTGGTTCTACGACAAGCAAG 59.779 50.000 0.00 0.00 38.52 4.01
388 389 2.206750 GTGTGGTTCTACGACAAGCAA 58.793 47.619 0.00 0.00 38.52 3.91
389 390 1.137282 TGTGTGGTTCTACGACAAGCA 59.863 47.619 0.00 0.00 38.52 3.91
390 391 1.860676 TGTGTGGTTCTACGACAAGC 58.139 50.000 0.00 0.00 38.52 4.01
391 392 2.993899 GGATGTGTGGTTCTACGACAAG 59.006 50.000 0.00 0.00 38.52 3.16
392 393 2.631062 AGGATGTGTGGTTCTACGACAA 59.369 45.455 0.00 0.00 38.52 3.18
393 394 2.244695 AGGATGTGTGGTTCTACGACA 58.755 47.619 0.00 0.00 34.44 4.35
394 395 3.442977 ACTAGGATGTGTGGTTCTACGAC 59.557 47.826 0.00 0.00 0.00 4.34
395 396 3.442625 CACTAGGATGTGTGGTTCTACGA 59.557 47.826 0.00 0.00 33.61 3.43
396 397 3.428999 CCACTAGGATGTGTGGTTCTACG 60.429 52.174 4.18 0.00 46.18 3.51
397 398 4.124851 CCACTAGGATGTGTGGTTCTAC 57.875 50.000 4.18 0.00 46.18 2.59
404 405 1.153369 CGCCCCACTAGGATGTGTG 60.153 63.158 0.00 0.00 38.24 3.82
405 406 1.305802 TCGCCCCACTAGGATGTGT 60.306 57.895 0.00 0.00 38.24 3.72
406 407 1.330655 ACTCGCCCCACTAGGATGTG 61.331 60.000 0.00 0.00 38.24 3.21
407 408 0.617820 AACTCGCCCCACTAGGATGT 60.618 55.000 0.00 0.00 38.24 3.06
408 409 0.105039 GAACTCGCCCCACTAGGATG 59.895 60.000 0.00 0.00 38.24 3.51
409 410 0.032017 AGAACTCGCCCCACTAGGAT 60.032 55.000 0.00 0.00 38.24 3.24
410 411 0.683504 GAGAACTCGCCCCACTAGGA 60.684 60.000 0.00 0.00 38.24 2.94
411 412 1.817209 GAGAACTCGCCCCACTAGG 59.183 63.158 0.00 0.00 0.00 3.02
412 413 1.433879 CGAGAACTCGCCCCACTAG 59.566 63.158 11.13 0.00 46.50 2.57
413 414 3.599584 CGAGAACTCGCCCCACTA 58.400 61.111 11.13 0.00 46.50 2.74
425 426 1.640428 GATCATGTGTTCGCCGAGAA 58.360 50.000 0.00 0.00 36.31 2.87
426 427 0.525455 CGATCATGTGTTCGCCGAGA 60.525 55.000 0.00 0.00 31.71 4.04
427 428 0.802222 ACGATCATGTGTTCGCCGAG 60.802 55.000 12.03 0.00 39.95 4.63
428 429 1.075979 CACGATCATGTGTTCGCCGA 61.076 55.000 12.03 0.00 39.95 5.54
429 430 1.344837 CACGATCATGTGTTCGCCG 59.655 57.895 12.03 2.43 39.95 6.46
430 431 1.715585 CCACGATCATGTGTTCGCC 59.284 57.895 12.03 0.00 39.95 5.54
431 432 1.060937 GCCACGATCATGTGTTCGC 59.939 57.895 12.03 3.29 39.95 4.70
432 433 1.344837 CGCCACGATCATGTGTTCG 59.655 57.895 10.87 10.87 41.50 3.95
433 434 1.715585 CCGCCACGATCATGTGTTC 59.284 57.895 0.00 0.00 38.20 3.18
434 435 2.398554 GCCGCCACGATCATGTGTT 61.399 57.895 0.00 0.00 38.20 3.32
435 436 2.819595 GCCGCCACGATCATGTGT 60.820 61.111 0.00 0.00 38.20 3.72
436 437 3.928769 CGCCGCCACGATCATGTG 61.929 66.667 0.00 0.00 39.60 3.21
448 449 3.950794 TTCACAGATCCACCGCCGC 62.951 63.158 0.00 0.00 0.00 6.53
449 450 1.811266 CTTCACAGATCCACCGCCG 60.811 63.158 0.00 0.00 0.00 6.46
450 451 2.109126 GCTTCACAGATCCACCGCC 61.109 63.158 0.00 0.00 0.00 6.13
451 452 2.109126 GGCTTCACAGATCCACCGC 61.109 63.158 0.00 0.00 0.00 5.68
452 453 1.450312 GGGCTTCACAGATCCACCG 60.450 63.158 0.00 0.00 0.00 4.94
453 454 1.077429 GGGGCTTCACAGATCCACC 60.077 63.158 0.00 0.00 0.00 4.61
454 455 1.077429 GGGGGCTTCACAGATCCAC 60.077 63.158 0.00 0.00 0.00 4.02
455 456 2.669133 CGGGGGCTTCACAGATCCA 61.669 63.158 0.00 0.00 0.00 3.41
456 457 2.190578 CGGGGGCTTCACAGATCC 59.809 66.667 0.00 0.00 0.00 3.36
457 458 2.514824 GCGGGGGCTTCACAGATC 60.515 66.667 0.00 0.00 0.00 2.75
458 459 4.473520 CGCGGGGGCTTCACAGAT 62.474 66.667 0.00 0.00 0.00 2.90
508 509 4.079253 GCTGGTATTTGAACCTGGAAAGA 58.921 43.478 0.00 0.00 40.44 2.52
545 546 3.675619 ATGTACCTTGGCCGGACGC 62.676 63.158 5.05 0.00 0.00 5.19
583 584 2.729491 TGCTTGTCGCGACGTGAG 60.729 61.111 31.88 27.45 43.27 3.51
678 684 0.179100 CTCGGAAGCACGACCATGAT 60.179 55.000 0.00 0.00 38.06 2.45
705 711 6.904498 TGGTCCTTTTTAAATGATACGTGTG 58.096 36.000 0.00 0.00 0.00 3.82
706 712 7.413657 CGATGGTCCTTTTTAAATGATACGTGT 60.414 37.037 0.00 0.00 0.00 4.49
707 713 6.905076 CGATGGTCCTTTTTAAATGATACGTG 59.095 38.462 0.00 0.00 0.00 4.49
708 714 6.596497 ACGATGGTCCTTTTTAAATGATACGT 59.404 34.615 0.00 0.00 0.00 3.57
709 715 6.905076 CACGATGGTCCTTTTTAAATGATACG 59.095 38.462 0.00 0.00 0.00 3.06
710 716 7.696453 CACACGATGGTCCTTTTTAAATGATAC 59.304 37.037 0.00 0.00 0.00 2.24
711 717 7.148154 CCACACGATGGTCCTTTTTAAATGATA 60.148 37.037 0.00 0.00 44.46 2.15
712 718 6.350110 CCACACGATGGTCCTTTTTAAATGAT 60.350 38.462 0.00 0.00 44.46 2.45
729 735 1.206371 GCTACCCAACTACCACACGAT 59.794 52.381 0.00 0.00 0.00 3.73
732 738 1.944430 GCAGCTACCCAACTACCACAC 60.944 57.143 0.00 0.00 0.00 3.82
739 745 2.971598 ATGCGGCAGCTACCCAACT 61.972 57.895 10.92 0.00 45.42 3.16
770 776 2.016704 CGCATGTCCGCTCGGTATC 61.017 63.158 8.28 1.82 36.47 2.24
799 805 0.389296 TGCGTCCACACGGATAACAG 60.389 55.000 0.00 0.00 46.80 3.16
801 807 1.136169 GTTTGCGTCCACACGGATAAC 60.136 52.381 0.00 0.00 46.68 1.89
837 3166 9.666626 TTTTATTTATTTCGTGTTCGTGTGAAT 57.333 25.926 0.00 0.00 36.29 2.57
880 3209 2.094545 GCAGAAATCATGACCCAACACC 60.095 50.000 0.00 0.00 0.00 4.16
890 3219 0.031585 CGGCATGGGCAGAAATCATG 59.968 55.000 0.00 0.00 43.71 3.07
891 3220 0.106569 TCGGCATGGGCAGAAATCAT 60.107 50.000 0.00 0.00 41.34 2.45
916 6981 0.824109 ATTTCATCCGCTGAGTCCGA 59.176 50.000 0.00 0.00 34.68 4.55
1316 7382 2.363359 GCAAATCCAAAGCAGATAGGGG 59.637 50.000 0.00 0.00 0.00 4.79
1327 7393 2.035321 GTCAAGTTCGGGCAAATCCAAA 59.965 45.455 0.00 0.00 36.21 3.28
1328 7394 1.611491 GTCAAGTTCGGGCAAATCCAA 59.389 47.619 0.00 0.00 36.21 3.53
1366 7432 4.160439 TCAGCAAAATCGACCAGATCTACT 59.840 41.667 0.00 0.00 38.98 2.57
1496 7566 5.049129 AGCATTTCACTCTTGCACTTAGTTC 60.049 40.000 0.00 0.00 38.84 3.01
1539 7609 4.929819 AAACTGCCGGAAAATAAACTGT 57.070 36.364 5.05 0.00 0.00 3.55
1563 7633 4.565236 GCTGGCCTAATAGCTCATTCTGAT 60.565 45.833 3.32 0.00 36.99 2.90
1596 7668 5.663795 AGTGTAATGCATAAAGATCTGCG 57.336 39.130 0.00 0.00 41.32 5.18
1639 7711 6.796072 CACAACAACAAAAAGAACACATTTGG 59.204 34.615 0.00 0.00 38.14 3.28
1643 7715 5.237048 AGCACAACAACAAAAAGAACACAT 58.763 33.333 0.00 0.00 0.00 3.21
1646 7718 6.364706 CAGTTAGCACAACAACAAAAAGAACA 59.635 34.615 4.30 0.00 0.00 3.18
1650 7722 5.129901 GCAGTTAGCACAACAACAAAAAG 57.870 39.130 4.30 0.00 44.79 2.27
1673 7745 2.124736 GCGAGGCCTGCCACAATA 60.125 61.111 12.00 0.00 38.92 1.90
1699 7771 5.645497 AGTGAGCATTCAGAATTACAGGAAC 59.355 40.000 0.00 0.00 32.98 3.62
1753 7825 9.208022 CATTACTGTTAACATCAAGTGAAGAGA 57.792 33.333 9.13 0.00 34.56 3.10
1768 7840 8.052748 AGTGAATATCTTGGGCATTACTGTTAA 58.947 33.333 0.00 0.00 0.00 2.01
1806 7878 9.715123 CTGTATAACGCAAATAATGTGAATGAA 57.285 29.630 0.00 0.00 42.32 2.57
1956 8028 5.148225 AGGAAGGGCATGATTTAAGGATT 57.852 39.130 0.00 0.00 0.00 3.01
2021 8093 6.865205 AGAAACAGTATCAAAATTTCTGCTGC 59.135 34.615 11.00 0.00 38.02 5.25
2304 8376 9.474920 GTAAACAGGACAATTGAAATCAAATCA 57.525 29.630 13.59 0.00 39.55 2.57
2305 8377 9.474920 TGTAAACAGGACAATTGAAATCAAATC 57.525 29.630 13.59 0.00 39.55 2.17
2306 8378 9.480053 CTGTAAACAGGACAATTGAAATCAAAT 57.520 29.630 13.59 0.00 40.20 2.32
2307 8379 8.870160 CTGTAAACAGGACAATTGAAATCAAA 57.130 30.769 13.59 0.00 40.20 2.69
2485 8563 7.700022 AAATATGTATCGGAGGGAGTACTAC 57.300 40.000 0.00 0.00 0.00 2.73
2517 8595 6.531021 AGAAGCTTACACTTTACTAAAGCCA 58.469 36.000 0.00 0.00 42.74 4.75
2590 8735 5.287513 GCGTCTGTTCAAGAGAGAGAAATAC 59.712 44.000 0.00 0.00 34.84 1.89
2604 8749 0.940833 TTTTGATGCGCGTCTGTTCA 59.059 45.000 28.53 7.52 0.00 3.18
2683 8828 1.517242 GCATGGTAGATGCCACTAGC 58.483 55.000 0.00 8.76 41.94 3.42
2685 8830 1.068588 GACGCATGGTAGATGCCACTA 59.931 52.381 0.00 0.00 41.94 2.74
2718 8863 9.500864 GTCTTAGTTTAGGTTAGTCTTCATACG 57.499 37.037 0.00 0.00 0.00 3.06
2963 9108 2.857618 TCGGCAACATTTTGAATACGC 58.142 42.857 0.00 0.00 34.24 4.42
3046 9191 8.727149 TCAGTCAAATATCCCCTAAATCTTGAT 58.273 33.333 0.00 0.00 0.00 2.57
3069 9215 4.096984 GCTCCTCAAAACAATACCCATCAG 59.903 45.833 0.00 0.00 0.00 2.90
3179 9384 4.507710 TGCTACTGCTGAACTGGATTAAG 58.492 43.478 0.00 0.00 40.48 1.85
3180 9385 4.551702 TGCTACTGCTGAACTGGATTAA 57.448 40.909 0.00 0.00 40.48 1.40
3181 9386 4.507710 CTTGCTACTGCTGAACTGGATTA 58.492 43.478 0.00 0.00 40.48 1.75
3182 9387 3.341823 CTTGCTACTGCTGAACTGGATT 58.658 45.455 0.00 0.00 40.48 3.01
3183 9388 2.938756 GCTTGCTACTGCTGAACTGGAT 60.939 50.000 0.00 0.00 40.48 3.41
3184 9389 1.609061 GCTTGCTACTGCTGAACTGGA 60.609 52.381 0.00 0.00 40.48 3.86
3185 9390 0.801251 GCTTGCTACTGCTGAACTGG 59.199 55.000 0.00 0.00 40.48 4.00
3186 9391 0.801251 GGCTTGCTACTGCTGAACTG 59.199 55.000 0.00 0.00 40.48 3.16
3187 9392 0.689623 AGGCTTGCTACTGCTGAACT 59.310 50.000 0.00 0.00 40.48 3.01
3188 9393 1.528129 AAGGCTTGCTACTGCTGAAC 58.472 50.000 0.00 0.00 40.48 3.18
3189 9394 1.881973 CAAAGGCTTGCTACTGCTGAA 59.118 47.619 0.00 0.00 40.48 3.02
3190 9395 1.202806 ACAAAGGCTTGCTACTGCTGA 60.203 47.619 0.00 0.00 40.48 4.26
3191 9396 1.242076 ACAAAGGCTTGCTACTGCTG 58.758 50.000 0.00 0.00 40.48 4.41
3192 9397 1.986882 AACAAAGGCTTGCTACTGCT 58.013 45.000 0.00 0.00 40.48 4.24
3193 9398 3.181496 GGATAACAAAGGCTTGCTACTGC 60.181 47.826 0.00 0.00 35.84 4.40
3194 9399 4.095483 CAGGATAACAAAGGCTTGCTACTG 59.905 45.833 0.00 0.00 35.84 2.74
3195 9400 4.263506 ACAGGATAACAAAGGCTTGCTACT 60.264 41.667 0.00 0.00 35.84 2.57
3196 9401 4.010349 ACAGGATAACAAAGGCTTGCTAC 58.990 43.478 0.00 0.00 35.84 3.58
3197 9402 4.301072 ACAGGATAACAAAGGCTTGCTA 57.699 40.909 0.00 0.00 35.84 3.49
3198 9403 3.160679 ACAGGATAACAAAGGCTTGCT 57.839 42.857 0.00 0.00 35.84 3.91
3199 9404 3.578688 CAACAGGATAACAAAGGCTTGC 58.421 45.455 0.00 0.00 35.84 4.01
3200 9405 3.826157 TCCAACAGGATAACAAAGGCTTG 59.174 43.478 0.00 0.00 38.61 4.01
3201 9406 4.112634 TCCAACAGGATAACAAAGGCTT 57.887 40.909 0.00 0.00 0.00 4.35
3202 9407 3.806949 TCCAACAGGATAACAAAGGCT 57.193 42.857 0.00 0.00 0.00 4.58
3203 9408 3.367395 GCTTCCAACAGGATAACAAAGGC 60.367 47.826 0.00 0.00 0.00 4.35
3204 9409 4.082125 AGCTTCCAACAGGATAACAAAGG 58.918 43.478 0.00 0.00 0.00 3.11
3205 9410 4.616835 GCAGCTTCCAACAGGATAACAAAG 60.617 45.833 0.00 0.00 0.00 2.77
3206 9411 3.255642 GCAGCTTCCAACAGGATAACAAA 59.744 43.478 0.00 0.00 0.00 2.83
3207 9412 2.819608 GCAGCTTCCAACAGGATAACAA 59.180 45.455 0.00 0.00 0.00 2.83
3208 9413 2.040278 AGCAGCTTCCAACAGGATAACA 59.960 45.455 0.00 0.00 0.00 2.41
3209 9414 2.421424 CAGCAGCTTCCAACAGGATAAC 59.579 50.000 0.00 0.00 0.00 1.89
3210 9415 2.715046 CAGCAGCTTCCAACAGGATAA 58.285 47.619 0.00 0.00 0.00 1.75
3211 9416 1.679944 GCAGCAGCTTCCAACAGGATA 60.680 52.381 0.00 0.00 37.91 2.59
3212 9417 0.964358 GCAGCAGCTTCCAACAGGAT 60.964 55.000 0.00 0.00 37.91 3.24
3213 9418 1.601759 GCAGCAGCTTCCAACAGGA 60.602 57.895 0.00 0.00 37.91 3.86
3214 9419 1.457823 TTGCAGCAGCTTCCAACAGG 61.458 55.000 1.76 0.00 42.74 4.00
3215 9420 0.318445 GTTGCAGCAGCTTCCAACAG 60.318 55.000 22.33 0.96 42.74 3.16
3216 9421 0.752743 AGTTGCAGCAGCTTCCAACA 60.753 50.000 26.22 6.61 42.74 3.33
3217 9422 0.386838 AAGTTGCAGCAGCTTCCAAC 59.613 50.000 18.13 20.74 42.74 3.77
3218 9423 0.386476 CAAGTTGCAGCAGCTTCCAA 59.614 50.000 20.70 0.00 42.74 3.53
3219 9424 2.035421 CAAGTTGCAGCAGCTTCCA 58.965 52.632 20.70 0.00 42.74 3.53
3220 9425 1.372623 GCAAGTTGCAGCAGCTTCC 60.373 57.895 20.70 9.41 44.26 3.46
3221 9426 4.240049 GCAAGTTGCAGCAGCTTC 57.760 55.556 20.70 12.28 44.26 3.86
3230 9435 0.595825 GTCCTGTGCTTGCAAGTTGC 60.596 55.000 26.55 21.17 45.29 4.17
3231 9436 0.740149 TGTCCTGTGCTTGCAAGTTG 59.260 50.000 26.55 13.98 0.00 3.16
3232 9437 1.027357 CTGTCCTGTGCTTGCAAGTT 58.973 50.000 26.55 0.00 0.00 2.66
3233 9438 1.450531 GCTGTCCTGTGCTTGCAAGT 61.451 55.000 26.55 0.00 0.00 3.16
3234 9439 1.285023 GCTGTCCTGTGCTTGCAAG 59.715 57.895 22.44 22.44 0.00 4.01
3412 9618 6.803807 CCTAGTTTCTTTTTAACAGCAGATGC 59.196 38.462 0.00 0.00 42.49 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.