Multiple sequence alignment - TraesCS3D01G290200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G290200 chr3D 100.000 2605 0 0 1 2605 400340720 400338116 0.000000e+00 4811.0
1 TraesCS3D01G290200 chr3D 86.875 320 39 3 1 318 372948306 372947988 3.190000e-94 355.0
2 TraesCS3D01G290200 chr3D 82.576 132 19 3 357 486 339164612 339164483 2.120000e-21 113.0
3 TraesCS3D01G290200 chr3A 88.638 1461 109 25 318 1761 519275251 519273831 0.000000e+00 1725.0
4 TraesCS3D01G290200 chr3A 86.436 752 58 18 1807 2557 519273840 519273132 0.000000e+00 784.0
5 TraesCS3D01G290200 chr3A 87.461 319 36 4 2 318 274438774 274438458 5.300000e-97 364.0
6 TraesCS3D01G290200 chr3A 86.792 318 39 3 2 318 327129354 327129669 4.120000e-93 351.0
7 TraesCS3D01G290200 chr3B 96.118 850 27 4 917 1761 526124826 526123978 0.000000e+00 1382.0
8 TraesCS3D01G290200 chr3B 86.720 753 64 10 1807 2557 526123987 526123269 0.000000e+00 804.0
9 TraesCS3D01G290200 chr3B 89.028 319 34 1 1 318 349932156 349932474 6.760000e-106 394.0
10 TraesCS3D01G290200 chr3B 81.053 475 63 15 441 905 526125271 526124814 1.150000e-93 353.0
11 TraesCS3D01G290200 chr4D 87.812 320 36 3 1 318 217994785 217994467 3.170000e-99 372.0
12 TraesCS3D01G290200 chr4D 87.461 319 37 3 2 318 395941922 395941605 5.300000e-97 364.0
13 TraesCS3D01G290200 chr5D 87.107 318 39 2 2 318 189300104 189299788 2.460000e-95 359.0
14 TraesCS3D01G290200 chr2D 87.342 316 37 2 1 315 283020967 283021280 2.460000e-95 359.0
15 TraesCS3D01G290200 chr2D 87.227 321 34 6 1 318 412849970 412849654 2.460000e-95 359.0
16 TraesCS3D01G290200 chr6B 86.765 204 25 2 1065 1267 77111887 77112089 2.610000e-55 226.0
17 TraesCS3D01G290200 chr6D 97.297 37 1 0 1725 1761 60610193 60610229 2.160000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G290200 chr3D 400338116 400340720 2604 True 4811.000000 4811 100.000000 1 2605 1 chr3D.!!$R3 2604
1 TraesCS3D01G290200 chr3A 519273132 519275251 2119 True 1254.500000 1725 87.537000 318 2557 2 chr3A.!!$R2 2239
2 TraesCS3D01G290200 chr3B 526123269 526125271 2002 True 846.333333 1382 87.963667 441 2557 3 chr3B.!!$R1 2116

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 0.042535 CGTTCTTGTTTCGCTTCGCA 60.043 50.0 0.00 0.00 0.0 5.10 F
75 76 0.110238 TCTTGTTTCGCTTCGCATGC 60.110 50.0 7.91 7.91 0.0 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1161 1179 0.179134 CGTTCCACTCCTCGATCCAC 60.179 60.000 0.0 0.0 0.00 4.02 R
1987 2035 1.414919 AGGACACTGCACCTAACGAAA 59.585 47.619 0.0 0.0 34.47 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.684881 CCTTGTAAGTGATCATGGTGGC 59.315 50.000 0.00 0.00 0.00 5.01
22 23 3.614092 CTTGTAAGTGATCATGGTGGCT 58.386 45.455 0.00 0.00 0.00 4.75
23 24 3.266510 TGTAAGTGATCATGGTGGCTC 57.733 47.619 0.00 0.00 0.00 4.70
24 25 2.092968 TGTAAGTGATCATGGTGGCTCC 60.093 50.000 0.00 0.00 0.00 4.70
32 33 2.926250 TGGTGGCTCCAAAGTGCT 59.074 55.556 5.68 0.00 44.12 4.40
33 34 2.150449 TGGTGGCTCCAAAGTGCTA 58.850 52.632 5.68 0.00 44.12 3.49
34 35 0.476338 TGGTGGCTCCAAAGTGCTAA 59.524 50.000 5.68 0.00 44.12 3.09
35 36 1.133637 TGGTGGCTCCAAAGTGCTAAA 60.134 47.619 5.68 0.00 44.12 1.85
36 37 1.960689 GGTGGCTCCAAAGTGCTAAAA 59.039 47.619 0.00 0.00 35.97 1.52
37 38 2.364002 GGTGGCTCCAAAGTGCTAAAAA 59.636 45.455 0.00 0.00 35.97 1.94
38 39 3.381045 GTGGCTCCAAAGTGCTAAAAAC 58.619 45.455 0.00 0.00 32.98 2.43
39 40 3.068165 GTGGCTCCAAAGTGCTAAAAACT 59.932 43.478 0.00 0.00 32.98 2.66
40 41 3.704061 TGGCTCCAAAGTGCTAAAAACTT 59.296 39.130 0.00 0.00 39.55 2.66
41 42 4.202111 TGGCTCCAAAGTGCTAAAAACTTC 60.202 41.667 0.00 0.00 36.87 3.01
42 43 4.202111 GGCTCCAAAGTGCTAAAAACTTCA 60.202 41.667 0.00 0.00 36.87 3.02
43 44 4.740205 GCTCCAAAGTGCTAAAAACTTCAC 59.260 41.667 0.00 0.00 36.87 3.18
44 45 5.257082 TCCAAAGTGCTAAAAACTTCACC 57.743 39.130 0.00 0.00 36.87 4.02
45 46 4.707448 TCCAAAGTGCTAAAAACTTCACCA 59.293 37.500 0.00 0.00 36.87 4.17
46 47 5.043248 CCAAAGTGCTAAAAACTTCACCAG 58.957 41.667 0.00 0.00 36.87 4.00
47 48 5.163561 CCAAAGTGCTAAAAACTTCACCAGA 60.164 40.000 0.00 0.00 36.87 3.86
48 49 6.329496 CAAAGTGCTAAAAACTTCACCAGAA 58.671 36.000 0.00 0.00 36.87 3.02
49 50 6.524101 AAGTGCTAAAAACTTCACCAGAAA 57.476 33.333 0.00 0.00 32.36 2.52
50 51 5.891451 AGTGCTAAAAACTTCACCAGAAAC 58.109 37.500 0.00 0.00 32.35 2.78
51 52 5.652452 AGTGCTAAAAACTTCACCAGAAACT 59.348 36.000 0.00 0.00 32.35 2.66
52 53 5.971792 GTGCTAAAAACTTCACCAGAAACTC 59.028 40.000 0.00 0.00 32.35 3.01
53 54 5.067283 TGCTAAAAACTTCACCAGAAACTCC 59.933 40.000 0.00 0.00 32.35 3.85
54 55 4.632538 AAAAACTTCACCAGAAACTCCG 57.367 40.909 0.00 0.00 32.35 4.63
55 56 3.277142 AAACTTCACCAGAAACTCCGT 57.723 42.857 0.00 0.00 32.35 4.69
56 57 3.277142 AACTTCACCAGAAACTCCGTT 57.723 42.857 0.00 0.00 32.35 4.44
57 58 2.835027 ACTTCACCAGAAACTCCGTTC 58.165 47.619 0.00 0.00 32.35 3.95
58 59 2.434702 ACTTCACCAGAAACTCCGTTCT 59.565 45.455 0.00 0.00 38.41 3.01
59 60 3.118371 ACTTCACCAGAAACTCCGTTCTT 60.118 43.478 0.00 0.00 35.63 2.52
60 61 2.833794 TCACCAGAAACTCCGTTCTTG 58.166 47.619 0.00 0.00 35.63 3.02
61 62 2.169769 TCACCAGAAACTCCGTTCTTGT 59.830 45.455 0.00 0.00 35.63 3.16
62 63 2.943033 CACCAGAAACTCCGTTCTTGTT 59.057 45.455 0.00 0.00 35.63 2.83
63 64 3.377172 CACCAGAAACTCCGTTCTTGTTT 59.623 43.478 0.00 0.00 35.63 2.83
64 65 3.626217 ACCAGAAACTCCGTTCTTGTTTC 59.374 43.478 9.07 9.07 45.59 2.78
66 67 2.636519 GAAACTCCGTTCTTGTTTCGC 58.363 47.619 0.00 0.00 39.70 4.70
67 68 1.949465 AACTCCGTTCTTGTTTCGCT 58.051 45.000 0.00 0.00 0.00 4.93
68 69 1.949465 ACTCCGTTCTTGTTTCGCTT 58.051 45.000 0.00 0.00 0.00 4.68
69 70 1.865340 ACTCCGTTCTTGTTTCGCTTC 59.135 47.619 0.00 0.00 0.00 3.86
70 71 0.856641 TCCGTTCTTGTTTCGCTTCG 59.143 50.000 0.00 0.00 0.00 3.79
71 72 0.721483 CCGTTCTTGTTTCGCTTCGC 60.721 55.000 0.00 0.00 0.00 4.70
72 73 0.042535 CGTTCTTGTTTCGCTTCGCA 60.043 50.000 0.00 0.00 0.00 5.10
73 74 1.398451 CGTTCTTGTTTCGCTTCGCAT 60.398 47.619 0.00 0.00 0.00 4.73
74 75 1.971962 GTTCTTGTTTCGCTTCGCATG 59.028 47.619 0.00 0.00 0.00 4.06
75 76 0.110238 TCTTGTTTCGCTTCGCATGC 60.110 50.000 7.91 7.91 0.00 4.06
76 77 1.067199 CTTGTTTCGCTTCGCATGCC 61.067 55.000 13.15 0.00 0.00 4.40
77 78 1.790090 TTGTTTCGCTTCGCATGCCA 61.790 50.000 13.15 0.00 0.00 4.92
78 79 1.137404 GTTTCGCTTCGCATGCCAT 59.863 52.632 13.15 0.00 0.00 4.40
79 80 0.863119 GTTTCGCTTCGCATGCCATC 60.863 55.000 13.15 0.00 0.00 3.51
80 81 1.304509 TTTCGCTTCGCATGCCATCA 61.305 50.000 13.15 0.00 0.00 3.07
81 82 1.096967 TTCGCTTCGCATGCCATCAT 61.097 50.000 13.15 0.00 0.00 2.45
82 83 1.082300 CGCTTCGCATGCCATCATC 60.082 57.895 13.15 0.00 0.00 2.92
83 84 1.504647 CGCTTCGCATGCCATCATCT 61.505 55.000 13.15 0.00 0.00 2.90
84 85 0.237761 GCTTCGCATGCCATCATCTC 59.762 55.000 13.15 0.00 0.00 2.75
85 86 0.873054 CTTCGCATGCCATCATCTCC 59.127 55.000 13.15 0.00 0.00 3.71
86 87 0.180878 TTCGCATGCCATCATCTCCA 59.819 50.000 13.15 0.00 0.00 3.86
87 88 0.399075 TCGCATGCCATCATCTCCAT 59.601 50.000 13.15 0.00 0.00 3.41
88 89 0.521735 CGCATGCCATCATCTCCATG 59.478 55.000 13.15 0.00 38.41 3.66
90 91 1.911057 CATGCCATCATCTCCATGCT 58.089 50.000 0.00 0.00 0.00 3.79
91 92 2.239400 CATGCCATCATCTCCATGCTT 58.761 47.619 0.00 0.00 0.00 3.91
92 93 1.687563 TGCCATCATCTCCATGCTTG 58.312 50.000 0.00 0.00 0.00 4.01
93 94 1.213430 TGCCATCATCTCCATGCTTGA 59.787 47.619 0.22 0.00 0.00 3.02
94 95 2.158519 TGCCATCATCTCCATGCTTGAT 60.159 45.455 0.22 0.00 0.00 2.57
95 96 2.488545 GCCATCATCTCCATGCTTGATC 59.511 50.000 0.22 0.00 0.00 2.92
96 97 3.751518 CCATCATCTCCATGCTTGATCA 58.248 45.455 0.22 0.00 0.00 2.92
97 98 4.336280 CCATCATCTCCATGCTTGATCAT 58.664 43.478 0.00 0.00 0.00 2.45
98 99 5.497474 CCATCATCTCCATGCTTGATCATA 58.503 41.667 0.00 0.00 0.00 2.15
99 100 5.354513 CCATCATCTCCATGCTTGATCATAC 59.645 44.000 0.00 0.00 0.00 2.39
100 101 5.820404 TCATCTCCATGCTTGATCATACT 57.180 39.130 0.00 0.00 0.00 2.12
101 102 5.791666 TCATCTCCATGCTTGATCATACTC 58.208 41.667 0.00 0.00 0.00 2.59
102 103 4.613925 TCTCCATGCTTGATCATACTCC 57.386 45.455 0.00 0.00 0.00 3.85
103 104 3.969312 TCTCCATGCTTGATCATACTCCA 59.031 43.478 0.00 0.00 0.00 3.86
104 105 4.409901 TCTCCATGCTTGATCATACTCCAA 59.590 41.667 0.00 0.00 0.00 3.53
105 106 5.072736 TCTCCATGCTTGATCATACTCCAAT 59.927 40.000 0.00 0.00 0.00 3.16
106 107 5.067954 TCCATGCTTGATCATACTCCAATG 58.932 41.667 0.00 0.00 0.00 2.82
107 108 4.825634 CCATGCTTGATCATACTCCAATGT 59.174 41.667 0.00 0.00 0.00 2.71
108 109 5.301045 CCATGCTTGATCATACTCCAATGTT 59.699 40.000 0.00 0.00 0.00 2.71
109 110 6.436261 CATGCTTGATCATACTCCAATGTTC 58.564 40.000 0.00 0.00 0.00 3.18
110 111 5.499313 TGCTTGATCATACTCCAATGTTCA 58.501 37.500 0.00 0.00 35.04 3.18
111 112 6.124340 TGCTTGATCATACTCCAATGTTCAT 58.876 36.000 0.00 0.00 36.16 2.57
112 113 6.261603 TGCTTGATCATACTCCAATGTTCATC 59.738 38.462 0.00 0.00 36.16 2.92
113 114 6.293845 GCTTGATCATACTCCAATGTTCATCC 60.294 42.308 0.00 0.00 36.16 3.51
114 115 6.505048 TGATCATACTCCAATGTTCATCCT 57.495 37.500 0.00 0.00 32.99 3.24
115 116 6.528321 TGATCATACTCCAATGTTCATCCTC 58.472 40.000 0.00 0.00 32.99 3.71
116 117 5.296151 TCATACTCCAATGTTCATCCTCC 57.704 43.478 0.00 0.00 0.00 4.30
117 118 4.971282 TCATACTCCAATGTTCATCCTCCT 59.029 41.667 0.00 0.00 0.00 3.69
118 119 5.429762 TCATACTCCAATGTTCATCCTCCTT 59.570 40.000 0.00 0.00 0.00 3.36
119 120 3.960571 ACTCCAATGTTCATCCTCCTTG 58.039 45.455 0.00 0.00 0.00 3.61
120 121 3.331889 ACTCCAATGTTCATCCTCCTTGT 59.668 43.478 0.00 0.00 0.00 3.16
121 122 3.944015 CTCCAATGTTCATCCTCCTTGTC 59.056 47.826 0.00 0.00 0.00 3.18
122 123 3.019564 CCAATGTTCATCCTCCTTGTCC 58.980 50.000 0.00 0.00 0.00 4.02
123 124 3.561960 CCAATGTTCATCCTCCTTGTCCA 60.562 47.826 0.00 0.00 0.00 4.02
124 125 4.081406 CAATGTTCATCCTCCTTGTCCAA 58.919 43.478 0.00 0.00 0.00 3.53
125 126 3.423539 TGTTCATCCTCCTTGTCCAAG 57.576 47.619 0.00 0.00 38.14 3.61
126 127 2.711009 TGTTCATCCTCCTTGTCCAAGT 59.289 45.455 6.31 0.00 36.72 3.16
127 128 3.244561 TGTTCATCCTCCTTGTCCAAGTC 60.245 47.826 6.31 0.00 36.72 3.01
128 129 2.619931 TCATCCTCCTTGTCCAAGTCA 58.380 47.619 6.31 0.00 36.72 3.41
129 130 2.568956 TCATCCTCCTTGTCCAAGTCAG 59.431 50.000 6.31 2.21 36.72 3.51
130 131 1.352083 TCCTCCTTGTCCAAGTCAGG 58.648 55.000 12.83 12.83 37.67 3.86
131 132 0.322008 CCTCCTTGTCCAAGTCAGGC 60.322 60.000 6.31 0.00 36.72 4.85
132 133 0.322008 CTCCTTGTCCAAGTCAGGCC 60.322 60.000 0.00 0.00 36.72 5.19
133 134 1.303643 CCTTGTCCAAGTCAGGCCC 60.304 63.158 0.00 0.00 36.72 5.80
134 135 1.763770 CTTGTCCAAGTCAGGCCCT 59.236 57.895 0.00 0.00 33.87 5.19
135 136 0.111253 CTTGTCCAAGTCAGGCCCTT 59.889 55.000 0.00 0.00 33.87 3.95
136 137 0.110486 TTGTCCAAGTCAGGCCCTTC 59.890 55.000 0.00 0.00 0.00 3.46
137 138 1.059584 TGTCCAAGTCAGGCCCTTCA 61.060 55.000 0.00 0.00 0.00 3.02
138 139 0.329596 GTCCAAGTCAGGCCCTTCAT 59.670 55.000 0.00 0.00 0.00 2.57
139 140 1.075601 TCCAAGTCAGGCCCTTCATT 58.924 50.000 0.00 0.00 0.00 2.57
140 141 1.428912 TCCAAGTCAGGCCCTTCATTT 59.571 47.619 0.00 0.00 0.00 2.32
141 142 1.821136 CCAAGTCAGGCCCTTCATTTC 59.179 52.381 0.00 0.00 0.00 2.17
142 143 2.556114 CCAAGTCAGGCCCTTCATTTCT 60.556 50.000 0.00 0.00 0.00 2.52
143 144 3.308402 CCAAGTCAGGCCCTTCATTTCTA 60.308 47.826 0.00 0.00 0.00 2.10
144 145 4.335416 CAAGTCAGGCCCTTCATTTCTAA 58.665 43.478 0.00 0.00 0.00 2.10
145 146 4.657814 AGTCAGGCCCTTCATTTCTAAA 57.342 40.909 0.00 0.00 0.00 1.85
146 147 4.593956 AGTCAGGCCCTTCATTTCTAAAG 58.406 43.478 0.00 0.00 0.00 1.85
147 148 4.289672 AGTCAGGCCCTTCATTTCTAAAGA 59.710 41.667 0.00 0.00 0.00 2.52
148 149 5.010282 GTCAGGCCCTTCATTTCTAAAGAA 58.990 41.667 0.00 0.00 0.00 2.52
149 150 5.476945 GTCAGGCCCTTCATTTCTAAAGAAA 59.523 40.000 7.56 7.56 46.60 2.52
150 151 6.015434 GTCAGGCCCTTCATTTCTAAAGAAAA 60.015 38.462 9.09 0.00 45.81 2.29
151 152 6.015434 TCAGGCCCTTCATTTCTAAAGAAAAC 60.015 38.462 9.09 0.00 45.81 2.43
152 153 5.838521 AGGCCCTTCATTTCTAAAGAAAACA 59.161 36.000 9.09 0.00 45.81 2.83
153 154 6.326323 AGGCCCTTCATTTCTAAAGAAAACAA 59.674 34.615 9.09 4.75 45.81 2.83
154 155 6.989759 GGCCCTTCATTTCTAAAGAAAACAAA 59.010 34.615 9.09 4.07 45.81 2.83
155 156 7.042051 GGCCCTTCATTTCTAAAGAAAACAAAC 60.042 37.037 9.09 0.00 45.81 2.93
156 157 7.494298 GCCCTTCATTTCTAAAGAAAACAAACA 59.506 33.333 9.09 0.00 45.81 2.83
157 158 9.546428 CCCTTCATTTCTAAAGAAAACAAACAT 57.454 29.630 9.09 0.00 45.81 2.71
171 172 9.474313 AGAAAACAAACATATCCTATTTAGGCA 57.526 29.630 0.00 0.00 43.31 4.75
172 173 9.736023 GAAAACAAACATATCCTATTTAGGCAG 57.264 33.333 0.00 0.00 43.31 4.85
173 174 6.884280 ACAAACATATCCTATTTAGGCAGC 57.116 37.500 0.00 0.00 43.31 5.25
174 175 6.364701 ACAAACATATCCTATTTAGGCAGCA 58.635 36.000 0.00 0.00 43.31 4.41
175 176 7.006509 ACAAACATATCCTATTTAGGCAGCAT 58.993 34.615 0.00 0.00 43.31 3.79
176 177 7.175641 ACAAACATATCCTATTTAGGCAGCATC 59.824 37.037 0.00 0.00 43.31 3.91
177 178 6.378661 ACATATCCTATTTAGGCAGCATCA 57.621 37.500 0.00 0.00 43.31 3.07
178 179 6.966751 ACATATCCTATTTAGGCAGCATCAT 58.033 36.000 0.00 0.00 43.31 2.45
179 180 8.094284 ACATATCCTATTTAGGCAGCATCATA 57.906 34.615 0.00 0.00 43.31 2.15
180 181 8.721479 ACATATCCTATTTAGGCAGCATCATAT 58.279 33.333 0.00 0.00 43.31 1.78
181 182 9.570468 CATATCCTATTTAGGCAGCATCATATT 57.430 33.333 0.00 0.00 43.31 1.28
182 183 9.790344 ATATCCTATTTAGGCAGCATCATATTC 57.210 33.333 0.00 0.00 43.31 1.75
183 184 7.262990 TCCTATTTAGGCAGCATCATATTCT 57.737 36.000 0.00 0.00 43.31 2.40
184 185 7.693132 TCCTATTTAGGCAGCATCATATTCTT 58.307 34.615 0.00 0.00 43.31 2.52
185 186 8.825774 TCCTATTTAGGCAGCATCATATTCTTA 58.174 33.333 0.00 0.00 43.31 2.10
186 187 9.624373 CCTATTTAGGCAGCATCATATTCTTAT 57.376 33.333 0.00 0.00 36.53 1.73
189 190 8.922931 TTTAGGCAGCATCATATTCTTATGAA 57.077 30.769 0.00 0.00 45.54 2.57
190 191 6.814506 AGGCAGCATCATATTCTTATGAAC 57.185 37.500 0.00 0.00 45.54 3.18
191 192 6.301486 AGGCAGCATCATATTCTTATGAACA 58.699 36.000 0.00 0.00 45.54 3.18
192 193 6.946583 AGGCAGCATCATATTCTTATGAACAT 59.053 34.615 0.00 0.00 45.54 2.71
193 194 7.450634 AGGCAGCATCATATTCTTATGAACATT 59.549 33.333 0.00 0.00 45.54 2.71
194 195 8.733458 GGCAGCATCATATTCTTATGAACATTA 58.267 33.333 0.00 0.00 45.54 1.90
195 196 9.770503 GCAGCATCATATTCTTATGAACATTAG 57.229 33.333 0.23 0.00 45.54 1.73
206 207 8.570096 TCTTATGAACATTAGAATCGTTACCG 57.430 34.615 1.79 0.00 0.00 4.02
221 222 5.163513 TCGTTACCGAGAAATGAAAGTACC 58.836 41.667 0.00 0.00 38.40 3.34
222 223 5.047802 TCGTTACCGAGAAATGAAAGTACCT 60.048 40.000 0.00 0.00 38.40 3.08
223 224 5.061808 CGTTACCGAGAAATGAAAGTACCTG 59.938 44.000 0.00 0.00 35.63 4.00
224 225 4.884668 ACCGAGAAATGAAAGTACCTGA 57.115 40.909 0.00 0.00 0.00 3.86
225 226 5.422214 ACCGAGAAATGAAAGTACCTGAT 57.578 39.130 0.00 0.00 0.00 2.90
226 227 6.540438 ACCGAGAAATGAAAGTACCTGATA 57.460 37.500 0.00 0.00 0.00 2.15
227 228 6.942976 ACCGAGAAATGAAAGTACCTGATAA 58.057 36.000 0.00 0.00 0.00 1.75
228 229 7.565680 ACCGAGAAATGAAAGTACCTGATAAT 58.434 34.615 0.00 0.00 0.00 1.28
229 230 8.047310 ACCGAGAAATGAAAGTACCTGATAATT 58.953 33.333 0.00 0.00 0.00 1.40
230 231 8.893727 CCGAGAAATGAAAGTACCTGATAATTT 58.106 33.333 0.00 0.00 33.84 1.82
238 239 8.402472 TGAAAGTACCTGATAATTTAATTGGCG 58.598 33.333 0.00 0.00 31.35 5.69
239 240 7.875327 AAGTACCTGATAATTTAATTGGCGT 57.125 32.000 0.00 0.00 0.00 5.68
240 241 7.259290 AGTACCTGATAATTTAATTGGCGTG 57.741 36.000 0.00 0.00 0.00 5.34
241 242 4.932146 ACCTGATAATTTAATTGGCGTGC 58.068 39.130 0.00 0.00 0.00 5.34
242 243 3.974401 CCTGATAATTTAATTGGCGTGCG 59.026 43.478 0.00 0.00 0.00 5.34
243 244 3.367607 TGATAATTTAATTGGCGTGCGC 58.632 40.909 8.17 8.17 41.06 6.09
244 245 1.816370 TAATTTAATTGGCGTGCGCG 58.184 45.000 16.86 16.86 43.06 6.86
245 246 0.169230 AATTTAATTGGCGTGCGCGA 59.831 45.000 26.19 2.13 43.06 5.87
246 247 0.248054 ATTTAATTGGCGTGCGCGAG 60.248 50.000 26.19 0.19 43.06 5.03
260 261 2.033793 CGCGAGCGCTAGTAATTAGT 57.966 50.000 18.99 0.00 39.32 2.24
261 262 1.970608 CGCGAGCGCTAGTAATTAGTC 59.029 52.381 18.99 0.00 39.32 2.59
262 263 2.317684 GCGAGCGCTAGTAATTAGTCC 58.682 52.381 18.99 0.00 38.26 3.85
263 264 2.921490 GCGAGCGCTAGTAATTAGTCCC 60.921 54.545 18.99 0.00 38.26 4.46
264 265 2.292569 CGAGCGCTAGTAATTAGTCCCA 59.707 50.000 11.50 0.00 0.00 4.37
265 266 3.057456 CGAGCGCTAGTAATTAGTCCCAT 60.057 47.826 11.50 0.00 0.00 4.00
266 267 4.238514 GAGCGCTAGTAATTAGTCCCATG 58.761 47.826 11.50 0.00 0.00 3.66
267 268 3.641906 AGCGCTAGTAATTAGTCCCATGT 59.358 43.478 8.99 0.00 0.00 3.21
268 269 4.831155 AGCGCTAGTAATTAGTCCCATGTA 59.169 41.667 8.99 0.00 0.00 2.29
269 270 5.303589 AGCGCTAGTAATTAGTCCCATGTAA 59.696 40.000 8.99 0.00 0.00 2.41
270 271 5.634020 GCGCTAGTAATTAGTCCCATGTAAG 59.366 44.000 0.00 0.00 0.00 2.34
271 272 6.737899 GCGCTAGTAATTAGTCCCATGTAAGT 60.738 42.308 0.00 0.00 0.00 2.24
272 273 7.522725 GCGCTAGTAATTAGTCCCATGTAAGTA 60.523 40.741 0.00 0.00 0.00 2.24
273 274 8.355169 CGCTAGTAATTAGTCCCATGTAAGTAA 58.645 37.037 0.00 0.00 0.00 2.24
274 275 9.473640 GCTAGTAATTAGTCCCATGTAAGTAAC 57.526 37.037 0.00 0.00 0.00 2.50
289 290 6.460781 TGTAAGTAACATTAGTGACTGTGGG 58.539 40.000 0.00 0.00 38.57 4.61
290 291 5.562298 AAGTAACATTAGTGACTGTGGGT 57.438 39.130 0.00 0.00 38.57 4.51
291 292 4.894784 AGTAACATTAGTGACTGTGGGTG 58.105 43.478 0.00 0.00 38.07 4.61
292 293 3.857157 AACATTAGTGACTGTGGGTGT 57.143 42.857 0.00 0.00 0.00 4.16
293 294 4.967084 AACATTAGTGACTGTGGGTGTA 57.033 40.909 0.00 0.00 0.00 2.90
294 295 4.967084 ACATTAGTGACTGTGGGTGTAA 57.033 40.909 0.00 0.00 0.00 2.41
295 296 4.638304 ACATTAGTGACTGTGGGTGTAAC 58.362 43.478 0.00 0.00 0.00 2.50
296 297 4.347000 ACATTAGTGACTGTGGGTGTAACT 59.653 41.667 0.00 0.00 36.74 2.24
297 298 5.541101 ACATTAGTGACTGTGGGTGTAACTA 59.459 40.000 0.00 0.00 36.74 2.24
298 299 6.212791 ACATTAGTGACTGTGGGTGTAACTAT 59.787 38.462 0.00 0.00 36.74 2.12
299 300 4.537135 AGTGACTGTGGGTGTAACTATG 57.463 45.455 0.00 0.00 36.74 2.23
300 301 3.260884 AGTGACTGTGGGTGTAACTATGG 59.739 47.826 0.00 0.00 36.74 2.74
301 302 3.007614 GTGACTGTGGGTGTAACTATGGT 59.992 47.826 0.00 0.00 36.74 3.55
302 303 4.221262 GTGACTGTGGGTGTAACTATGGTA 59.779 45.833 0.00 0.00 36.74 3.25
303 304 4.464951 TGACTGTGGGTGTAACTATGGTAG 59.535 45.833 0.00 0.00 36.74 3.18
304 305 4.422984 ACTGTGGGTGTAACTATGGTAGT 58.577 43.478 0.00 0.00 41.73 2.73
305 306 4.222145 ACTGTGGGTGTAACTATGGTAGTG 59.778 45.833 0.00 0.00 39.39 2.74
306 307 4.418359 TGTGGGTGTAACTATGGTAGTGA 58.582 43.478 0.00 0.00 39.39 3.41
307 308 5.027460 TGTGGGTGTAACTATGGTAGTGAT 58.973 41.667 0.00 0.00 39.39 3.06
308 309 5.105106 TGTGGGTGTAACTATGGTAGTGATG 60.105 44.000 0.00 0.00 39.39 3.07
309 310 5.027460 TGGGTGTAACTATGGTAGTGATGT 58.973 41.667 0.00 0.00 39.39 3.06
310 311 5.128171 TGGGTGTAACTATGGTAGTGATGTC 59.872 44.000 0.00 0.00 39.39 3.06
311 312 5.452917 GGGTGTAACTATGGTAGTGATGTCC 60.453 48.000 0.00 0.00 39.39 4.02
312 313 5.363005 GGTGTAACTATGGTAGTGATGTCCT 59.637 44.000 0.00 0.00 39.39 3.85
313 314 6.461231 GGTGTAACTATGGTAGTGATGTCCTC 60.461 46.154 0.00 0.00 39.39 3.71
314 315 6.096423 GTGTAACTATGGTAGTGATGTCCTCA 59.904 42.308 0.00 0.00 39.39 3.86
315 316 6.839134 TGTAACTATGGTAGTGATGTCCTCAT 59.161 38.462 0.00 0.00 39.39 2.90
332 333 3.326297 CCTCATCAGAATTAGTCCTCCCC 59.674 52.174 0.00 0.00 0.00 4.81
333 334 3.318313 TCATCAGAATTAGTCCTCCCCC 58.682 50.000 0.00 0.00 0.00 5.40
334 335 3.051032 TCATCAGAATTAGTCCTCCCCCT 60.051 47.826 0.00 0.00 0.00 4.79
336 337 3.385115 TCAGAATTAGTCCTCCCCCTTC 58.615 50.000 0.00 0.00 0.00 3.46
338 339 3.135530 CAGAATTAGTCCTCCCCCTTCTG 59.864 52.174 0.00 0.00 34.21 3.02
339 340 2.198334 ATTAGTCCTCCCCCTTCTGG 57.802 55.000 0.00 0.00 0.00 3.86
344 345 3.732849 CTCCCCCTTCTGGTGGGC 61.733 72.222 0.00 0.00 43.26 5.36
365 366 2.047179 GCCGAGGACCCTGTTGTC 60.047 66.667 0.00 0.00 34.42 3.18
370 371 0.320508 GAGGACCCTGTTGTCGGTTC 60.321 60.000 0.00 0.00 36.07 3.62
372 373 1.448497 GACCCTGTTGTCGGTTCCA 59.552 57.895 0.00 0.00 30.56 3.53
388 389 2.236893 GTTCCAAAATGGGCCACATCAT 59.763 45.455 9.28 0.00 39.40 2.45
390 391 1.832366 CCAAAATGGGCCACATCATGA 59.168 47.619 9.28 0.00 39.40 3.07
409 410 1.095228 AGGCCCATGACGCATAAACG 61.095 55.000 0.00 0.00 39.50 3.60
411 412 1.092921 GCCCATGACGCATAAACGGA 61.093 55.000 0.00 0.00 37.37 4.69
418 419 1.865340 GACGCATAAACGGAAGGATCC 59.135 52.381 2.48 2.48 42.80 3.36
427 428 3.383698 ACGGAAGGATCCAGAAGACTA 57.616 47.619 15.82 0.00 46.97 2.59
428 429 3.917300 ACGGAAGGATCCAGAAGACTAT 58.083 45.455 15.82 0.00 46.97 2.12
430 431 3.891977 CGGAAGGATCCAGAAGACTATCA 59.108 47.826 15.82 0.00 46.97 2.15
436 437 4.202295 GGATCCAGAAGACTATCATGCACA 60.202 45.833 6.95 0.00 0.00 4.57
444 445 5.108187 AGACTATCATGCACACCAAGAAT 57.892 39.130 0.00 0.00 0.00 2.40
446 447 5.104610 AGACTATCATGCACACCAAGAATCT 60.105 40.000 0.00 0.00 0.00 2.40
454 455 4.583907 TGCACACCAAGAATCTTGATTTCA 59.416 37.500 23.32 11.42 0.00 2.69
463 464 8.136165 CCAAGAATCTTGATTTCATGGAAGATC 58.864 37.037 23.32 0.00 42.00 2.75
480 481 4.392921 AGATCCAGTTTCCTCATACGTG 57.607 45.455 0.00 0.00 0.00 4.49
509 510 3.798515 AGGATGTTGTAACCCTAGGACA 58.201 45.455 11.48 5.69 0.00 4.02
511 512 4.788617 AGGATGTTGTAACCCTAGGACATT 59.211 41.667 11.48 4.20 0.00 2.71
512 513 5.104485 AGGATGTTGTAACCCTAGGACATTC 60.104 44.000 11.48 9.68 0.00 2.67
515 516 2.112998 TGTAACCCTAGGACATTCGGG 58.887 52.381 11.48 0.00 42.53 5.14
550 551 3.745799 CTCGAGGAGCTTGGTCTATAGA 58.254 50.000 3.91 0.00 0.00 1.98
551 552 4.331968 CTCGAGGAGCTTGGTCTATAGAT 58.668 47.826 5.57 0.00 0.00 1.98
552 553 4.075682 TCGAGGAGCTTGGTCTATAGATG 58.924 47.826 5.57 0.00 0.00 2.90
553 554 3.192422 CGAGGAGCTTGGTCTATAGATGG 59.808 52.174 5.57 0.00 0.00 3.51
581 582 6.645790 TTATAATCTTCGGGTAGACACCTC 57.354 41.667 0.00 0.00 45.04 3.85
586 587 0.994247 TCGGGTAGACACCTCCACTA 59.006 55.000 0.00 0.00 45.04 2.74
597 598 6.966751 AGACACCTCCACTATGTACTTACTA 58.033 40.000 0.00 0.00 0.00 1.82
598 599 7.584532 AGACACCTCCACTATGTACTTACTAT 58.415 38.462 0.00 0.00 0.00 2.12
599 600 8.721479 AGACACCTCCACTATGTACTTACTATA 58.279 37.037 0.00 0.00 0.00 1.31
620 621 8.621286 ACTATAACACAATAAATACAAGCAGGC 58.379 33.333 0.00 0.00 0.00 4.85
634 635 5.560724 ACAAGCAGGCCGTATGATATTATT 58.439 37.500 0.00 0.00 0.00 1.40
767 775 3.023949 GCCTGTCCGCCATCACTCT 62.024 63.158 0.00 0.00 0.00 3.24
770 778 1.207089 CCTGTCCGCCATCACTCTAAA 59.793 52.381 0.00 0.00 0.00 1.85
786 794 1.062587 CTAAAATCAGCCAGGAACGCG 59.937 52.381 3.53 3.53 0.00 6.01
793 801 0.958822 AGCCAGGAACGCGAATTTTT 59.041 45.000 15.93 0.00 0.00 1.94
844 854 7.765695 ACCACATTTATGTTCTCACTTCAAT 57.234 32.000 0.00 0.00 39.39 2.57
873 889 9.702726 CTTTTTGTATATCAGTGAAACATACGG 57.297 33.333 0.00 0.00 41.43 4.02
877 893 9.438228 TTGTATATCAGTGAAACATACGGAAAA 57.562 29.630 0.00 0.00 41.43 2.29
890 906 6.025280 ACATACGGAAAATTTGTGTATTCGC 58.975 36.000 0.00 0.00 0.00 4.70
895 911 5.115773 CGGAAAATTTGTGTATTCGCGAAAA 59.884 36.000 27.23 14.69 32.20 2.29
896 912 6.345093 CGGAAAATTTGTGTATTCGCGAAAAA 60.345 34.615 27.23 20.47 32.20 1.94
965 981 7.852146 GCAATATGCAAGTACGCTTTCGTGT 62.852 44.000 0.00 0.00 45.70 4.49
1031 1047 3.680786 CCGTCTGCCCGTCTCACA 61.681 66.667 0.00 0.00 0.00 3.58
1161 1179 0.107831 TGGAGGTGAACAAGAACCGG 59.892 55.000 0.00 0.00 41.61 5.28
1328 1346 0.549950 CCCATCTCTGCCCACATCTT 59.450 55.000 0.00 0.00 0.00 2.40
1540 1560 0.317479 ACTGTTGTAGTCAGACCGGC 59.683 55.000 0.00 0.00 33.17 6.13
1666 1690 8.190122 TGAGGTGAATATTTGTGTTATGCAATC 58.810 33.333 0.00 0.00 0.00 2.67
1684 1708 8.827177 ATGCAATCTTATTTATGCTTGGATTG 57.173 30.769 0.00 0.00 40.48 2.67
1755 1781 7.864108 ATCATGTTTGTGTGCTTAGCTATTA 57.136 32.000 5.60 0.00 0.00 0.98
1756 1782 7.307493 TCATGTTTGTGTGCTTAGCTATTAG 57.693 36.000 5.60 0.00 0.00 1.73
1757 1783 6.878923 TCATGTTTGTGTGCTTAGCTATTAGT 59.121 34.615 5.60 0.00 0.00 2.24
1758 1784 7.390440 TCATGTTTGTGTGCTTAGCTATTAGTT 59.610 33.333 5.60 0.00 0.00 2.24
1759 1785 6.898041 TGTTTGTGTGCTTAGCTATTAGTTG 58.102 36.000 5.60 0.00 0.00 3.16
1760 1786 6.708502 TGTTTGTGTGCTTAGCTATTAGTTGA 59.291 34.615 5.60 0.00 0.00 3.18
1761 1787 7.227711 TGTTTGTGTGCTTAGCTATTAGTTGAA 59.772 33.333 5.60 0.00 0.00 2.69
1762 1788 6.968131 TGTGTGCTTAGCTATTAGTTGAAG 57.032 37.500 5.60 0.00 0.00 3.02
1763 1789 6.697395 TGTGTGCTTAGCTATTAGTTGAAGA 58.303 36.000 5.60 0.00 0.00 2.87
1764 1790 7.158697 TGTGTGCTTAGCTATTAGTTGAAGAA 58.841 34.615 5.60 0.00 0.00 2.52
1765 1791 7.659799 TGTGTGCTTAGCTATTAGTTGAAGAAA 59.340 33.333 5.60 0.00 0.00 2.52
1766 1792 8.504005 GTGTGCTTAGCTATTAGTTGAAGAAAA 58.496 33.333 5.60 0.00 0.00 2.29
1767 1793 9.231297 TGTGCTTAGCTATTAGTTGAAGAAAAT 57.769 29.630 5.60 0.00 0.00 1.82
1768 1794 9.495754 GTGCTTAGCTATTAGTTGAAGAAAATG 57.504 33.333 5.60 0.00 0.00 2.32
1769 1795 8.677300 TGCTTAGCTATTAGTTGAAGAAAATGG 58.323 33.333 5.60 0.00 0.00 3.16
1770 1796 8.893727 GCTTAGCTATTAGTTGAAGAAAATGGA 58.106 33.333 0.00 0.00 0.00 3.41
1779 1805 9.651913 TTAGTTGAAGAAAATGGATTATTTGCC 57.348 29.630 0.00 0.00 38.93 4.52
1780 1806 7.105588 AGTTGAAGAAAATGGATTATTTGCCC 58.894 34.615 0.00 0.00 38.93 5.36
1781 1807 5.988287 TGAAGAAAATGGATTATTTGCCCC 58.012 37.500 0.00 0.00 38.93 5.80
1782 1808 5.486775 TGAAGAAAATGGATTATTTGCCCCA 59.513 36.000 0.00 0.00 38.93 4.96
1783 1809 5.357742 AGAAAATGGATTATTTGCCCCAC 57.642 39.130 0.00 0.00 38.93 4.61
1784 1810 5.032170 AGAAAATGGATTATTTGCCCCACT 58.968 37.500 0.00 0.00 38.93 4.00
1785 1811 5.488561 AGAAAATGGATTATTTGCCCCACTT 59.511 36.000 0.00 0.00 38.93 3.16
1786 1812 5.357742 AAATGGATTATTTGCCCCACTTC 57.642 39.130 0.00 0.00 37.59 3.01
1787 1813 3.756082 TGGATTATTTGCCCCACTTCT 57.244 42.857 0.00 0.00 0.00 2.85
1788 1814 4.871871 TGGATTATTTGCCCCACTTCTA 57.128 40.909 0.00 0.00 0.00 2.10
1789 1815 5.199982 TGGATTATTTGCCCCACTTCTAA 57.800 39.130 0.00 0.00 0.00 2.10
1790 1816 4.953579 TGGATTATTTGCCCCACTTCTAAC 59.046 41.667 0.00 0.00 0.00 2.34
1791 1817 5.201243 GGATTATTTGCCCCACTTCTAACT 58.799 41.667 0.00 0.00 0.00 2.24
1792 1818 5.656859 GGATTATTTGCCCCACTTCTAACTT 59.343 40.000 0.00 0.00 0.00 2.66
1793 1819 6.154534 GGATTATTTGCCCCACTTCTAACTTT 59.845 38.462 0.00 0.00 0.00 2.66
1794 1820 4.871933 ATTTGCCCCACTTCTAACTTTG 57.128 40.909 0.00 0.00 0.00 2.77
1795 1821 3.586470 TTGCCCCACTTCTAACTTTGA 57.414 42.857 0.00 0.00 0.00 2.69
1796 1822 3.806949 TGCCCCACTTCTAACTTTGAT 57.193 42.857 0.00 0.00 0.00 2.57
1797 1823 3.686016 TGCCCCACTTCTAACTTTGATC 58.314 45.455 0.00 0.00 0.00 2.92
1798 1824 3.073798 TGCCCCACTTCTAACTTTGATCA 59.926 43.478 0.00 0.00 0.00 2.92
1799 1825 4.263905 TGCCCCACTTCTAACTTTGATCAT 60.264 41.667 0.00 0.00 0.00 2.45
1800 1826 4.706962 GCCCCACTTCTAACTTTGATCATT 59.293 41.667 0.00 0.00 0.00 2.57
1801 1827 5.185828 GCCCCACTTCTAACTTTGATCATTT 59.814 40.000 0.00 0.00 0.00 2.32
1802 1828 6.624423 CCCCACTTCTAACTTTGATCATTTG 58.376 40.000 0.00 0.00 0.00 2.32
1803 1829 6.095377 CCCACTTCTAACTTTGATCATTTGC 58.905 40.000 0.00 0.00 0.00 3.68
1804 1830 6.095377 CCACTTCTAACTTTGATCATTTGCC 58.905 40.000 0.00 0.00 0.00 4.52
1805 1831 6.294675 CCACTTCTAACTTTGATCATTTGCCA 60.295 38.462 0.00 0.00 0.00 4.92
1806 1832 7.318141 CACTTCTAACTTTGATCATTTGCCAT 58.682 34.615 0.00 0.00 0.00 4.40
1807 1833 8.461222 CACTTCTAACTTTGATCATTTGCCATA 58.539 33.333 0.00 0.00 0.00 2.74
1808 1834 9.193806 ACTTCTAACTTTGATCATTTGCCATAT 57.806 29.630 0.00 0.00 0.00 1.78
1816 1842 9.806203 CTTTGATCATTTGCCATATTAGTTGAA 57.194 29.630 0.00 0.00 0.00 2.69
1833 1859 8.943594 TTAGTTGAACACCCTGGTATTTAATT 57.056 30.769 0.00 0.00 0.00 1.40
1846 1872 8.539544 CCTGGTATTTAATTTTGATTCTGGGTT 58.460 33.333 0.00 0.00 0.00 4.11
1909 1935 5.067936 ACTGAGTGTATTGGGAGTTCTATCG 59.932 44.000 0.00 0.00 0.00 2.92
1917 1964 9.090103 TGTATTGGGAGTTCTATCGAGAATTAT 57.910 33.333 0.00 0.00 43.58 1.28
1918 1965 9.360093 GTATTGGGAGTTCTATCGAGAATTATG 57.640 37.037 0.00 0.00 43.58 1.90
1919 1966 5.784177 TGGGAGTTCTATCGAGAATTATGC 58.216 41.667 0.00 0.00 43.58 3.14
1920 1967 5.540337 TGGGAGTTCTATCGAGAATTATGCT 59.460 40.000 0.00 0.00 43.58 3.79
1921 1968 6.719829 TGGGAGTTCTATCGAGAATTATGCTA 59.280 38.462 0.00 0.00 43.58 3.49
1922 1969 7.397476 TGGGAGTTCTATCGAGAATTATGCTAT 59.603 37.037 0.00 0.00 43.58 2.97
1923 1970 8.254508 GGGAGTTCTATCGAGAATTATGCTATT 58.745 37.037 0.00 0.00 43.58 1.73
1924 1971 9.646427 GGAGTTCTATCGAGAATTATGCTATTT 57.354 33.333 0.00 0.00 43.58 1.40
1942 1989 7.278135 TGCTATTTCTAAGCAGTTCAGATGAT 58.722 34.615 0.00 0.00 44.78 2.45
1991 2039 8.314635 CACTCGAAGTTCTATTATCTGTTTTCG 58.685 37.037 0.56 0.00 37.00 3.46
2019 2067 5.106673 GGTGCAGTGTCCTATCAGTTTTTAC 60.107 44.000 0.00 0.00 0.00 2.01
2022 2070 5.705905 GCAGTGTCCTATCAGTTTTTACCTT 59.294 40.000 0.00 0.00 0.00 3.50
2069 2117 6.302269 CCCATGAAGGCATTAATCTACTTCT 58.698 40.000 17.42 6.93 38.60 2.85
2078 2126 7.982354 AGGCATTAATCTACTTCTGACTGTTAC 59.018 37.037 0.00 0.00 0.00 2.50
2135 2183 9.814899 CTAGATATGATACCTTTATGGCTTGAG 57.185 37.037 0.00 0.00 40.22 3.02
2145 2193 4.574674 TTATGGCTTGAGTTGTGATCCT 57.425 40.909 0.00 0.00 0.00 3.24
2161 2209 2.242882 TCCTCCTAACGGCCTAAGTT 57.757 50.000 0.00 0.00 35.75 2.66
2181 2229 6.585695 AGTTGTCCTCAGTTTATTCGACTA 57.414 37.500 0.00 0.00 0.00 2.59
2191 2239 9.440784 CTCAGTTTATTCGACTAGTATGTTCTC 57.559 37.037 0.00 0.00 0.00 2.87
2209 2257 5.063438 TGTTCTCTGTATGCGCTTTATGTTC 59.937 40.000 9.73 0.00 0.00 3.18
2309 2359 1.133025 GTCCACCGGAGCATTCATTTG 59.867 52.381 9.46 0.00 29.39 2.32
2393 2443 6.648725 ATTGCATAAACTACTCGAACAGTC 57.351 37.500 0.00 0.00 36.43 3.51
2444 2494 7.435192 GTGGTGAAAAAGTGAGGTTTGAATTAG 59.565 37.037 0.00 0.00 0.00 1.73
2476 2526 9.845740 AATTTTTCCTGGTATGCTTTTTACTTT 57.154 25.926 0.00 0.00 0.00 2.66
2525 2576 2.545526 CAGAGCATGTCAAACTCGTTGT 59.454 45.455 0.00 0.00 38.47 3.32
2561 2612 8.260270 TCTGACTGTCATTTTGATATGAAGTG 57.740 34.615 11.45 0.00 36.37 3.16
2562 2613 8.096414 TCTGACTGTCATTTTGATATGAAGTGA 58.904 33.333 11.45 0.00 36.37 3.41
2563 2614 8.260270 TGACTGTCATTTTGATATGAAGTGAG 57.740 34.615 6.36 0.00 36.37 3.51
2564 2615 8.096414 TGACTGTCATTTTGATATGAAGTGAGA 58.904 33.333 6.36 0.00 36.37 3.27
2565 2616 8.261492 ACTGTCATTTTGATATGAAGTGAGAC 57.739 34.615 0.00 0.00 36.37 3.36
2566 2617 7.879677 ACTGTCATTTTGATATGAAGTGAGACA 59.120 33.333 0.00 0.00 36.37 3.41
2567 2618 8.797350 TGTCATTTTGATATGAAGTGAGACAT 57.203 30.769 0.00 0.00 36.37 3.06
2568 2619 8.671028 TGTCATTTTGATATGAAGTGAGACATG 58.329 33.333 0.00 0.00 36.37 3.21
2569 2620 8.886719 GTCATTTTGATATGAAGTGAGACATGA 58.113 33.333 0.00 0.00 36.37 3.07
2570 2621 9.106070 TCATTTTGATATGAAGTGAGACATGAG 57.894 33.333 0.00 0.00 31.82 2.90
2571 2622 8.890718 CATTTTGATATGAAGTGAGACATGAGT 58.109 33.333 0.00 0.00 0.00 3.41
2575 2626 9.538508 TTGATATGAAGTGAGACATGAGTATTG 57.461 33.333 0.00 0.00 0.00 1.90
2576 2627 8.146412 TGATATGAAGTGAGACATGAGTATTGG 58.854 37.037 0.00 0.00 0.00 3.16
2577 2628 6.550938 ATGAAGTGAGACATGAGTATTGGA 57.449 37.500 0.00 0.00 0.00 3.53
2578 2629 6.550938 TGAAGTGAGACATGAGTATTGGAT 57.449 37.500 0.00 0.00 0.00 3.41
2579 2630 7.660030 TGAAGTGAGACATGAGTATTGGATA 57.340 36.000 0.00 0.00 0.00 2.59
2580 2631 8.255111 TGAAGTGAGACATGAGTATTGGATAT 57.745 34.615 0.00 0.00 0.00 1.63
2581 2632 8.146412 TGAAGTGAGACATGAGTATTGGATATG 58.854 37.037 0.00 0.00 0.00 1.78
2582 2633 7.609097 AGTGAGACATGAGTATTGGATATGT 57.391 36.000 0.00 0.00 34.91 2.29
2583 2634 7.665690 AGTGAGACATGAGTATTGGATATGTC 58.334 38.462 0.00 0.00 44.81 3.06
2584 2635 7.288621 AGTGAGACATGAGTATTGGATATGTCA 59.711 37.037 15.42 0.00 46.12 3.58
2585 2636 8.093307 GTGAGACATGAGTATTGGATATGTCAT 58.907 37.037 15.42 0.00 46.12 3.06
2586 2637 8.092687 TGAGACATGAGTATTGGATATGTCATG 58.907 37.037 15.42 15.00 46.12 3.07
2587 2638 6.877855 AGACATGAGTATTGGATATGTCATGC 59.122 38.462 15.42 11.66 46.12 4.06
2588 2639 6.776744 ACATGAGTATTGGATATGTCATGCT 58.223 36.000 0.00 0.00 39.85 3.79
2589 2640 6.653740 ACATGAGTATTGGATATGTCATGCTG 59.346 38.462 0.00 3.88 39.85 4.41
2590 2641 6.178607 TGAGTATTGGATATGTCATGCTGT 57.821 37.500 0.00 0.00 0.00 4.40
2591 2642 5.993441 TGAGTATTGGATATGTCATGCTGTG 59.007 40.000 0.00 0.00 0.00 3.66
2592 2643 5.933617 AGTATTGGATATGTCATGCTGTGT 58.066 37.500 0.00 0.00 0.00 3.72
2593 2644 7.066307 AGTATTGGATATGTCATGCTGTGTA 57.934 36.000 0.00 0.00 0.00 2.90
2594 2645 7.683578 AGTATTGGATATGTCATGCTGTGTAT 58.316 34.615 0.00 0.00 0.00 2.29
2595 2646 6.812879 ATTGGATATGTCATGCTGTGTATG 57.187 37.500 0.00 0.00 0.00 2.39
2596 2647 4.067192 TGGATATGTCATGCTGTGTATGC 58.933 43.478 0.00 0.00 0.00 3.14
2597 2648 3.438087 GGATATGTCATGCTGTGTATGCC 59.562 47.826 0.00 0.00 0.00 4.40
2598 2649 2.423446 ATGTCATGCTGTGTATGCCA 57.577 45.000 0.00 0.00 0.00 4.92
2599 2650 1.741528 TGTCATGCTGTGTATGCCAG 58.258 50.000 0.00 0.00 0.00 4.85
2600 2651 1.003464 TGTCATGCTGTGTATGCCAGT 59.997 47.619 0.00 0.00 32.41 4.00
2601 2652 2.235898 TGTCATGCTGTGTATGCCAGTA 59.764 45.455 0.00 0.00 32.41 2.74
2602 2653 3.118298 TGTCATGCTGTGTATGCCAGTAT 60.118 43.478 0.00 0.00 35.94 2.12
2603 2654 4.100808 TGTCATGCTGTGTATGCCAGTATA 59.899 41.667 3.60 0.00 34.13 1.47
2604 2655 5.221702 TGTCATGCTGTGTATGCCAGTATAT 60.222 40.000 3.60 0.00 34.13 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.684881 GCCACCATGATCACTTACAAGG 59.315 50.000 0.00 0.00 0.00 3.61
1 2 3.614092 AGCCACCATGATCACTTACAAG 58.386 45.455 0.00 0.00 0.00 3.16
2 3 3.609853 GAGCCACCATGATCACTTACAA 58.390 45.455 0.00 0.00 0.00 2.41
3 4 2.092968 GGAGCCACCATGATCACTTACA 60.093 50.000 0.00 0.00 38.79 2.41
4 5 2.092968 TGGAGCCACCATGATCACTTAC 60.093 50.000 0.00 0.00 44.64 2.34
5 6 2.195727 TGGAGCCACCATGATCACTTA 58.804 47.619 0.00 0.00 44.64 2.24
6 7 0.994247 TGGAGCCACCATGATCACTT 59.006 50.000 0.00 0.00 44.64 3.16
7 8 2.700783 TGGAGCCACCATGATCACT 58.299 52.632 0.00 0.00 44.64 3.41
16 17 1.616159 TTTAGCACTTTGGAGCCACC 58.384 50.000 0.00 0.00 39.54 4.61
17 18 3.068165 AGTTTTTAGCACTTTGGAGCCAC 59.932 43.478 0.00 0.00 0.00 5.01
18 19 3.295973 AGTTTTTAGCACTTTGGAGCCA 58.704 40.909 0.00 0.00 0.00 4.75
19 20 4.202111 TGAAGTTTTTAGCACTTTGGAGCC 60.202 41.667 0.00 0.00 34.49 4.70
20 21 4.740205 GTGAAGTTTTTAGCACTTTGGAGC 59.260 41.667 0.00 0.00 34.49 4.70
21 22 5.163561 TGGTGAAGTTTTTAGCACTTTGGAG 60.164 40.000 0.00 0.00 34.49 3.86
22 23 4.707448 TGGTGAAGTTTTTAGCACTTTGGA 59.293 37.500 0.00 0.00 34.49 3.53
23 24 5.004922 TGGTGAAGTTTTTAGCACTTTGG 57.995 39.130 0.00 0.00 34.49 3.28
24 25 5.890334 TCTGGTGAAGTTTTTAGCACTTTG 58.110 37.500 0.00 0.00 34.49 2.77
25 26 6.524101 TTCTGGTGAAGTTTTTAGCACTTT 57.476 33.333 0.00 0.00 34.49 2.66
26 27 6.152831 AGTTTCTGGTGAAGTTTTTAGCACTT 59.847 34.615 0.00 0.00 37.18 3.16
27 28 5.652452 AGTTTCTGGTGAAGTTTTTAGCACT 59.348 36.000 0.00 0.00 33.28 4.40
28 29 5.891451 AGTTTCTGGTGAAGTTTTTAGCAC 58.109 37.500 0.00 0.00 33.28 4.40
29 30 5.067283 GGAGTTTCTGGTGAAGTTTTTAGCA 59.933 40.000 0.00 0.00 33.28 3.49
30 31 5.520632 GGAGTTTCTGGTGAAGTTTTTAGC 58.479 41.667 0.00 0.00 33.28 3.09
31 32 5.296035 ACGGAGTTTCTGGTGAAGTTTTTAG 59.704 40.000 0.00 0.00 37.78 1.85
32 33 5.187687 ACGGAGTTTCTGGTGAAGTTTTTA 58.812 37.500 0.00 0.00 37.78 1.52
33 34 4.014406 ACGGAGTTTCTGGTGAAGTTTTT 58.986 39.130 0.00 0.00 37.78 1.94
34 35 3.617284 ACGGAGTTTCTGGTGAAGTTTT 58.383 40.909 0.00 0.00 37.78 2.43
35 36 3.277142 ACGGAGTTTCTGGTGAAGTTT 57.723 42.857 0.00 0.00 37.78 2.66
50 51 1.136611 CGAAGCGAAACAAGAACGGAG 60.137 52.381 0.00 0.00 0.00 4.63
51 52 0.856641 CGAAGCGAAACAAGAACGGA 59.143 50.000 0.00 0.00 0.00 4.69
52 53 3.345087 CGAAGCGAAACAAGAACGG 57.655 52.632 0.00 0.00 0.00 4.44
66 67 0.873054 GGAGATGATGGCATGCGAAG 59.127 55.000 12.44 0.00 34.11 3.79
67 68 0.180878 TGGAGATGATGGCATGCGAA 59.819 50.000 12.44 2.40 34.11 4.70
68 69 0.399075 ATGGAGATGATGGCATGCGA 59.601 50.000 12.44 8.58 34.11 5.10
69 70 0.521735 CATGGAGATGATGGCATGCG 59.478 55.000 12.44 0.00 34.11 4.73
70 71 0.243907 GCATGGAGATGATGGCATGC 59.756 55.000 9.90 9.90 38.57 4.06
71 72 1.911057 AGCATGGAGATGATGGCATG 58.089 50.000 3.81 0.00 34.11 4.06
72 73 2.158519 TCAAGCATGGAGATGATGGCAT 60.159 45.455 0.00 0.00 37.47 4.40
73 74 1.213430 TCAAGCATGGAGATGATGGCA 59.787 47.619 0.00 0.00 0.00 4.92
74 75 1.977056 TCAAGCATGGAGATGATGGC 58.023 50.000 0.00 0.00 0.00 4.40
75 76 3.751518 TGATCAAGCATGGAGATGATGG 58.248 45.455 0.00 0.00 32.90 3.51
76 77 6.174049 AGTATGATCAAGCATGGAGATGATG 58.826 40.000 0.00 0.00 32.90 3.07
77 78 6.375830 AGTATGATCAAGCATGGAGATGAT 57.624 37.500 0.00 0.00 35.33 2.45
78 79 5.279859 GGAGTATGATCAAGCATGGAGATGA 60.280 44.000 0.00 0.00 0.00 2.92
79 80 4.936411 GGAGTATGATCAAGCATGGAGATG 59.064 45.833 0.00 0.00 0.00 2.90
80 81 4.596212 TGGAGTATGATCAAGCATGGAGAT 59.404 41.667 0.00 0.00 0.00 2.75
81 82 3.969312 TGGAGTATGATCAAGCATGGAGA 59.031 43.478 0.00 0.00 0.00 3.71
82 83 4.347360 TGGAGTATGATCAAGCATGGAG 57.653 45.455 0.00 0.00 0.00 3.86
83 84 4.776435 TTGGAGTATGATCAAGCATGGA 57.224 40.909 0.00 0.00 0.00 3.41
84 85 4.825634 ACATTGGAGTATGATCAAGCATGG 59.174 41.667 0.00 0.00 0.00 3.66
85 86 6.038936 TGAACATTGGAGTATGATCAAGCATG 59.961 38.462 0.00 0.00 35.29 4.06
86 87 6.124340 TGAACATTGGAGTATGATCAAGCAT 58.876 36.000 0.00 0.00 35.29 3.79
87 88 5.499313 TGAACATTGGAGTATGATCAAGCA 58.501 37.500 0.00 0.00 35.29 3.91
88 89 6.293845 GGATGAACATTGGAGTATGATCAAGC 60.294 42.308 0.00 0.00 39.66 4.01
89 90 6.996879 AGGATGAACATTGGAGTATGATCAAG 59.003 38.462 0.00 0.00 39.66 3.02
90 91 6.903516 AGGATGAACATTGGAGTATGATCAA 58.096 36.000 0.00 0.00 39.66 2.57
91 92 6.464892 GGAGGATGAACATTGGAGTATGATCA 60.465 42.308 0.00 0.00 40.25 2.92
92 93 5.936956 GGAGGATGAACATTGGAGTATGATC 59.063 44.000 0.00 0.00 0.00 2.92
93 94 5.610132 AGGAGGATGAACATTGGAGTATGAT 59.390 40.000 0.00 0.00 0.00 2.45
94 95 4.971282 AGGAGGATGAACATTGGAGTATGA 59.029 41.667 0.00 0.00 0.00 2.15
95 96 5.301835 AGGAGGATGAACATTGGAGTATG 57.698 43.478 0.00 0.00 0.00 2.39
96 97 5.192522 ACAAGGAGGATGAACATTGGAGTAT 59.807 40.000 0.00 0.00 33.13 2.12
97 98 4.536090 ACAAGGAGGATGAACATTGGAGTA 59.464 41.667 0.00 0.00 33.13 2.59
98 99 3.331889 ACAAGGAGGATGAACATTGGAGT 59.668 43.478 0.00 0.00 33.13 3.85
99 100 3.944015 GACAAGGAGGATGAACATTGGAG 59.056 47.826 0.00 0.00 33.13 3.86
100 101 3.308402 GGACAAGGAGGATGAACATTGGA 60.308 47.826 0.00 0.00 33.13 3.53
101 102 3.019564 GGACAAGGAGGATGAACATTGG 58.980 50.000 0.00 0.00 33.13 3.16
102 103 3.689347 TGGACAAGGAGGATGAACATTG 58.311 45.455 0.00 0.00 34.64 2.82
103 104 4.202609 ACTTGGACAAGGAGGATGAACATT 60.203 41.667 15.72 0.00 42.53 2.71
104 105 3.331889 ACTTGGACAAGGAGGATGAACAT 59.668 43.478 15.72 0.00 42.53 2.71
105 106 2.711009 ACTTGGACAAGGAGGATGAACA 59.289 45.455 15.72 0.00 42.53 3.18
106 107 3.244561 TGACTTGGACAAGGAGGATGAAC 60.245 47.826 15.72 0.00 42.53 3.18
107 108 2.978978 TGACTTGGACAAGGAGGATGAA 59.021 45.455 15.72 0.00 42.53 2.57
108 109 2.568956 CTGACTTGGACAAGGAGGATGA 59.431 50.000 15.72 0.00 42.53 2.92
109 110 2.355513 CCTGACTTGGACAAGGAGGATG 60.356 54.545 19.79 5.28 41.25 3.51
110 111 1.912043 CCTGACTTGGACAAGGAGGAT 59.088 52.381 19.79 0.44 41.25 3.24
111 112 1.352083 CCTGACTTGGACAAGGAGGA 58.648 55.000 19.79 2.11 41.25 3.71
112 113 0.322008 GCCTGACTTGGACAAGGAGG 60.322 60.000 20.01 20.01 42.53 4.30
113 114 0.322008 GGCCTGACTTGGACAAGGAG 60.322 60.000 15.72 10.59 42.53 3.69
114 115 1.761174 GGCCTGACTTGGACAAGGA 59.239 57.895 15.72 2.14 42.53 3.36
115 116 1.303643 GGGCCTGACTTGGACAAGG 60.304 63.158 15.72 0.56 42.53 3.61
116 117 0.111253 AAGGGCCTGACTTGGACAAG 59.889 55.000 6.92 10.34 43.79 3.16
117 118 0.110486 GAAGGGCCTGACTTGGACAA 59.890 55.000 6.92 0.00 36.67 3.18
118 119 1.059584 TGAAGGGCCTGACTTGGACA 61.060 55.000 6.92 0.00 36.67 4.02
119 120 0.329596 ATGAAGGGCCTGACTTGGAC 59.670 55.000 6.92 0.00 0.00 4.02
120 121 1.075601 AATGAAGGGCCTGACTTGGA 58.924 50.000 6.92 0.00 0.00 3.53
121 122 1.821136 GAAATGAAGGGCCTGACTTGG 59.179 52.381 6.92 0.00 0.00 3.61
122 123 2.800250 AGAAATGAAGGGCCTGACTTG 58.200 47.619 6.92 0.00 0.00 3.16
123 124 4.657814 TTAGAAATGAAGGGCCTGACTT 57.342 40.909 6.92 0.00 0.00 3.01
124 125 4.289672 TCTTTAGAAATGAAGGGCCTGACT 59.710 41.667 6.92 3.29 0.00 3.41
125 126 4.589908 TCTTTAGAAATGAAGGGCCTGAC 58.410 43.478 6.92 5.29 0.00 3.51
126 127 4.927267 TCTTTAGAAATGAAGGGCCTGA 57.073 40.909 6.92 0.00 0.00 3.86
127 128 5.982890 TTTCTTTAGAAATGAAGGGCCTG 57.017 39.130 6.92 0.00 38.94 4.85
128 129 5.838521 TGTTTTCTTTAGAAATGAAGGGCCT 59.161 36.000 0.00 0.00 42.83 5.19
129 130 6.096673 TGTTTTCTTTAGAAATGAAGGGCC 57.903 37.500 5.81 0.00 42.83 5.80
130 131 7.494298 TGTTTGTTTTCTTTAGAAATGAAGGGC 59.506 33.333 5.81 0.00 42.83 5.19
131 132 8.940768 TGTTTGTTTTCTTTAGAAATGAAGGG 57.059 30.769 5.81 0.00 42.83 3.95
145 146 9.474313 TGCCTAAATAGGATATGTTTGTTTTCT 57.526 29.630 10.71 0.00 46.63 2.52
146 147 9.736023 CTGCCTAAATAGGATATGTTTGTTTTC 57.264 33.333 10.71 0.00 46.63 2.29
147 148 8.197439 GCTGCCTAAATAGGATATGTTTGTTTT 58.803 33.333 10.71 0.00 46.63 2.43
148 149 7.341769 TGCTGCCTAAATAGGATATGTTTGTTT 59.658 33.333 10.71 0.00 46.63 2.83
149 150 6.833416 TGCTGCCTAAATAGGATATGTTTGTT 59.167 34.615 10.71 0.00 46.63 2.83
150 151 6.364701 TGCTGCCTAAATAGGATATGTTTGT 58.635 36.000 10.71 0.00 46.63 2.83
151 152 6.882610 TGCTGCCTAAATAGGATATGTTTG 57.117 37.500 10.71 0.00 46.63 2.93
152 153 7.233632 TGATGCTGCCTAAATAGGATATGTTT 58.766 34.615 10.71 0.00 46.63 2.83
153 154 6.782986 TGATGCTGCCTAAATAGGATATGTT 58.217 36.000 10.71 0.00 46.63 2.71
154 155 6.378661 TGATGCTGCCTAAATAGGATATGT 57.621 37.500 10.71 0.00 46.63 2.29
155 156 9.570468 AATATGATGCTGCCTAAATAGGATATG 57.430 33.333 10.71 0.00 46.63 1.78
156 157 9.790344 GAATATGATGCTGCCTAAATAGGATAT 57.210 33.333 10.71 0.78 46.63 1.63
157 158 8.996655 AGAATATGATGCTGCCTAAATAGGATA 58.003 33.333 10.71 0.00 46.63 2.59
158 159 7.870027 AGAATATGATGCTGCCTAAATAGGAT 58.130 34.615 10.71 0.00 46.63 3.24
159 160 7.262990 AGAATATGATGCTGCCTAAATAGGA 57.737 36.000 10.71 0.00 46.63 2.94
160 161 7.934855 AAGAATATGATGCTGCCTAAATAGG 57.065 36.000 1.92 1.92 46.42 2.57
163 164 9.524496 TTCATAAGAATATGATGCTGCCTAAAT 57.476 29.630 0.00 0.00 45.54 1.40
164 165 8.786898 GTTCATAAGAATATGATGCTGCCTAAA 58.213 33.333 0.00 0.00 45.54 1.85
165 166 7.938490 TGTTCATAAGAATATGATGCTGCCTAA 59.062 33.333 0.00 0.00 45.54 2.69
166 167 7.452562 TGTTCATAAGAATATGATGCTGCCTA 58.547 34.615 0.00 0.00 45.54 3.93
167 168 6.301486 TGTTCATAAGAATATGATGCTGCCT 58.699 36.000 0.00 0.00 45.54 4.75
168 169 6.564709 TGTTCATAAGAATATGATGCTGCC 57.435 37.500 0.00 0.00 45.54 4.85
169 170 9.770503 CTAATGTTCATAAGAATATGATGCTGC 57.229 33.333 0.00 0.00 45.54 5.25
200 201 6.161381 TCAGGTACTTTCATTTCTCGGTAAC 58.839 40.000 0.00 0.00 34.60 2.50
201 202 6.349243 TCAGGTACTTTCATTTCTCGGTAA 57.651 37.500 0.00 0.00 34.60 2.85
202 203 5.988310 TCAGGTACTTTCATTTCTCGGTA 57.012 39.130 0.00 0.00 34.60 4.02
203 204 4.884668 TCAGGTACTTTCATTTCTCGGT 57.115 40.909 0.00 0.00 34.60 4.69
204 205 8.438676 AATTATCAGGTACTTTCATTTCTCGG 57.561 34.615 0.00 0.00 34.60 4.63
212 213 8.402472 CGCCAATTAAATTATCAGGTACTTTCA 58.598 33.333 0.00 0.00 34.60 2.69
213 214 8.403236 ACGCCAATTAAATTATCAGGTACTTTC 58.597 33.333 0.00 0.00 34.60 2.62
214 215 8.188139 CACGCCAATTAAATTATCAGGTACTTT 58.812 33.333 0.00 0.00 34.60 2.66
215 216 7.681065 GCACGCCAATTAAATTATCAGGTACTT 60.681 37.037 0.00 0.00 34.60 2.24
216 217 6.238648 GCACGCCAATTAAATTATCAGGTACT 60.239 38.462 0.00 0.00 43.88 2.73
217 218 5.912955 GCACGCCAATTAAATTATCAGGTAC 59.087 40.000 0.00 0.00 0.00 3.34
218 219 5.277586 CGCACGCCAATTAAATTATCAGGTA 60.278 40.000 0.00 0.00 0.00 3.08
219 220 4.497340 CGCACGCCAATTAAATTATCAGGT 60.497 41.667 0.00 0.00 0.00 4.00
220 221 3.974401 CGCACGCCAATTAAATTATCAGG 59.026 43.478 0.00 0.00 0.00 3.86
221 222 3.421888 GCGCACGCCAATTAAATTATCAG 59.578 43.478 0.30 0.00 34.56 2.90
222 223 3.367607 GCGCACGCCAATTAAATTATCA 58.632 40.909 0.30 0.00 34.56 2.15
223 224 2.400408 CGCGCACGCCAATTAAATTATC 59.600 45.455 8.75 0.00 37.98 1.75
224 225 2.032302 TCGCGCACGCCAATTAAATTAT 59.968 40.909 8.75 0.00 39.84 1.28
225 226 1.397343 TCGCGCACGCCAATTAAATTA 59.603 42.857 8.75 0.00 39.84 1.40
226 227 0.169230 TCGCGCACGCCAATTAAATT 59.831 45.000 8.75 0.00 39.84 1.82
227 228 0.248054 CTCGCGCACGCCAATTAAAT 60.248 50.000 8.75 0.00 39.84 1.40
228 229 1.133664 CTCGCGCACGCCAATTAAA 59.866 52.632 8.75 0.00 39.84 1.52
229 230 2.781957 CTCGCGCACGCCAATTAA 59.218 55.556 8.75 0.00 39.84 1.40
230 231 3.860125 GCTCGCGCACGCCAATTA 61.860 61.111 8.75 0.00 39.84 1.40
242 243 2.317684 GGACTAATTACTAGCGCTCGC 58.682 52.381 16.34 6.09 42.33 5.03
243 244 2.292569 TGGGACTAATTACTAGCGCTCG 59.707 50.000 16.34 11.32 0.00 5.03
244 245 4.238514 CATGGGACTAATTACTAGCGCTC 58.761 47.826 16.34 0.00 0.00 5.03
245 246 3.641906 ACATGGGACTAATTACTAGCGCT 59.358 43.478 17.26 17.26 0.00 5.92
246 247 3.991367 ACATGGGACTAATTACTAGCGC 58.009 45.455 0.00 0.00 0.00 5.92
247 248 6.746120 ACTTACATGGGACTAATTACTAGCG 58.254 40.000 0.00 0.00 0.00 4.26
248 249 9.473640 GTTACTTACATGGGACTAATTACTAGC 57.526 37.037 0.00 0.00 0.00 3.42
255 256 9.832445 CACTAATGTTACTTACATGGGACTAAT 57.168 33.333 0.00 0.00 46.75 1.73
256 257 9.038072 TCACTAATGTTACTTACATGGGACTAA 57.962 33.333 0.00 0.00 46.75 2.24
257 258 8.472413 GTCACTAATGTTACTTACATGGGACTA 58.528 37.037 0.00 0.00 46.75 2.59
258 259 7.180408 AGTCACTAATGTTACTTACATGGGACT 59.820 37.037 0.00 7.10 46.75 3.85
259 260 7.277981 CAGTCACTAATGTTACTTACATGGGAC 59.722 40.741 0.00 0.00 46.75 4.46
260 261 7.038587 ACAGTCACTAATGTTACTTACATGGGA 60.039 37.037 0.00 0.00 46.75 4.37
261 262 7.064609 CACAGTCACTAATGTTACTTACATGGG 59.935 40.741 0.00 0.00 46.75 4.00
262 263 7.064609 CCACAGTCACTAATGTTACTTACATGG 59.935 40.741 0.00 0.00 46.75 3.66
263 264 7.064609 CCCACAGTCACTAATGTTACTTACATG 59.935 40.741 0.00 0.00 46.75 3.21
265 266 6.042322 ACCCACAGTCACTAATGTTACTTACA 59.958 38.462 0.00 0.00 41.97 2.41
266 267 6.367969 CACCCACAGTCACTAATGTTACTTAC 59.632 42.308 0.00 0.00 29.05 2.34
267 268 6.042322 ACACCCACAGTCACTAATGTTACTTA 59.958 38.462 0.00 0.00 29.05 2.24
268 269 5.163237 ACACCCACAGTCACTAATGTTACTT 60.163 40.000 0.00 0.00 29.05 2.24
269 270 4.347000 ACACCCACAGTCACTAATGTTACT 59.653 41.667 0.00 0.00 31.44 2.24
270 271 4.638304 ACACCCACAGTCACTAATGTTAC 58.362 43.478 0.00 0.00 0.00 2.50
271 272 4.967084 ACACCCACAGTCACTAATGTTA 57.033 40.909 0.00 0.00 0.00 2.41
272 273 3.857157 ACACCCACAGTCACTAATGTT 57.143 42.857 0.00 0.00 0.00 2.71
273 274 4.347000 AGTTACACCCACAGTCACTAATGT 59.653 41.667 0.00 0.00 0.00 2.71
274 275 4.894784 AGTTACACCCACAGTCACTAATG 58.105 43.478 0.00 0.00 0.00 1.90
275 276 6.351881 CCATAGTTACACCCACAGTCACTAAT 60.352 42.308 0.00 0.00 31.66 1.73
276 277 5.046878 CCATAGTTACACCCACAGTCACTAA 60.047 44.000 0.00 0.00 31.66 2.24
277 278 4.464951 CCATAGTTACACCCACAGTCACTA 59.535 45.833 0.00 0.00 32.23 2.74
278 279 3.260884 CCATAGTTACACCCACAGTCACT 59.739 47.826 0.00 0.00 0.00 3.41
279 280 3.007614 ACCATAGTTACACCCACAGTCAC 59.992 47.826 0.00 0.00 0.00 3.67
280 281 3.244582 ACCATAGTTACACCCACAGTCA 58.755 45.455 0.00 0.00 0.00 3.41
281 282 3.975168 ACCATAGTTACACCCACAGTC 57.025 47.619 0.00 0.00 0.00 3.51
282 283 4.222145 CACTACCATAGTTACACCCACAGT 59.778 45.833 0.00 0.00 36.76 3.55
283 284 4.464951 TCACTACCATAGTTACACCCACAG 59.535 45.833 0.00 0.00 36.76 3.66
284 285 4.418359 TCACTACCATAGTTACACCCACA 58.582 43.478 0.00 0.00 36.76 4.17
285 286 5.105064 ACATCACTACCATAGTTACACCCAC 60.105 44.000 0.00 0.00 36.76 4.61
286 287 5.027460 ACATCACTACCATAGTTACACCCA 58.973 41.667 0.00 0.00 36.76 4.51
287 288 5.452917 GGACATCACTACCATAGTTACACCC 60.453 48.000 0.00 0.00 36.76 4.61
288 289 5.363005 AGGACATCACTACCATAGTTACACC 59.637 44.000 0.00 0.00 36.76 4.16
289 290 6.096423 TGAGGACATCACTACCATAGTTACAC 59.904 42.308 0.00 0.00 36.76 2.90
290 291 6.192044 TGAGGACATCACTACCATAGTTACA 58.808 40.000 0.00 0.00 36.76 2.41
291 292 6.710597 TGAGGACATCACTACCATAGTTAC 57.289 41.667 0.00 0.00 36.76 2.50
306 307 5.306678 GGAGGACTAATTCTGATGAGGACAT 59.693 44.000 0.00 0.00 39.67 3.06
307 308 4.651503 GGAGGACTAATTCTGATGAGGACA 59.348 45.833 0.00 0.00 0.00 4.02
308 309 4.039852 GGGAGGACTAATTCTGATGAGGAC 59.960 50.000 0.00 0.00 0.00 3.85
309 310 4.227197 GGGAGGACTAATTCTGATGAGGA 58.773 47.826 0.00 0.00 0.00 3.71
310 311 3.326297 GGGGAGGACTAATTCTGATGAGG 59.674 52.174 0.00 0.00 0.00 3.86
311 312 3.326297 GGGGGAGGACTAATTCTGATGAG 59.674 52.174 0.00 0.00 0.00 2.90
312 313 3.051032 AGGGGGAGGACTAATTCTGATGA 60.051 47.826 0.00 0.00 0.00 2.92
313 314 3.321950 AGGGGGAGGACTAATTCTGATG 58.678 50.000 0.00 0.00 0.00 3.07
314 315 3.734344 AGGGGGAGGACTAATTCTGAT 57.266 47.619 0.00 0.00 0.00 2.90
315 316 3.014110 AGAAGGGGGAGGACTAATTCTGA 59.986 47.826 0.00 0.00 0.00 3.27
316 317 3.135530 CAGAAGGGGGAGGACTAATTCTG 59.864 52.174 0.00 0.00 37.08 3.02
348 349 2.047179 GACAACAGGGTCCTCGGC 60.047 66.667 0.00 0.00 0.00 5.54
351 352 0.320508 GAACCGACAACAGGGTCCTC 60.321 60.000 0.00 0.00 39.52 3.71
356 357 1.394618 TTTTGGAACCGACAACAGGG 58.605 50.000 0.00 0.00 0.00 4.45
359 360 1.683917 CCCATTTTGGAACCGACAACA 59.316 47.619 0.00 0.00 40.96 3.33
360 361 1.604438 GCCCATTTTGGAACCGACAAC 60.604 52.381 0.00 0.00 40.96 3.32
365 366 1.291906 GTGGCCCATTTTGGAACCG 59.708 57.895 0.00 0.00 40.96 4.44
370 371 1.832366 TCATGATGTGGCCCATTTTGG 59.168 47.619 0.00 0.00 37.25 3.28
372 373 2.112998 CCTCATGATGTGGCCCATTTT 58.887 47.619 0.00 0.00 32.56 1.82
388 389 0.254462 TTTATGCGTCATGGGCCTCA 59.746 50.000 4.53 0.00 0.00 3.86
390 391 1.095228 CGTTTATGCGTCATGGGCCT 61.095 55.000 4.53 1.00 0.00 5.19
394 395 1.330521 CCTTCCGTTTATGCGTCATGG 59.669 52.381 0.00 0.00 0.00 3.66
409 410 5.792741 CATGATAGTCTTCTGGATCCTTCC 58.207 45.833 14.23 0.00 42.94 3.46
411 412 4.657504 TGCATGATAGTCTTCTGGATCCTT 59.342 41.667 14.23 0.00 0.00 3.36
418 419 3.865446 TGGTGTGCATGATAGTCTTCTG 58.135 45.455 0.00 0.00 0.00 3.02
427 428 4.338012 TCAAGATTCTTGGTGTGCATGAT 58.662 39.130 22.86 0.00 0.00 2.45
428 429 3.753815 TCAAGATTCTTGGTGTGCATGA 58.246 40.909 22.86 1.25 0.00 3.07
430 431 5.244402 TGAAATCAAGATTCTTGGTGTGCAT 59.756 36.000 22.86 8.07 0.00 3.96
436 437 6.950041 TCTTCCATGAAATCAAGATTCTTGGT 59.050 34.615 22.86 15.57 32.17 3.67
463 464 1.066143 AGCCACGTATGAGGAAACTGG 60.066 52.381 2.13 0.00 44.43 4.00
480 481 3.532542 GGTTACAACATCCTAGTCAGCC 58.467 50.000 0.00 0.00 0.00 4.85
531 532 3.192422 CCATCTATAGACCAAGCTCCTCG 59.808 52.174 4.10 0.00 0.00 4.63
533 534 2.903135 GCCATCTATAGACCAAGCTCCT 59.097 50.000 4.10 0.00 0.00 3.69
534 535 2.634940 TGCCATCTATAGACCAAGCTCC 59.365 50.000 4.10 0.00 0.00 4.70
535 536 3.070159 TGTGCCATCTATAGACCAAGCTC 59.930 47.826 4.10 7.28 0.00 4.09
536 537 3.041211 TGTGCCATCTATAGACCAAGCT 58.959 45.455 4.10 0.00 0.00 3.74
538 539 9.896645 ATTATAATGTGCCATCTATAGACCAAG 57.103 33.333 4.10 0.00 0.00 3.61
539 540 9.890629 GATTATAATGTGCCATCTATAGACCAA 57.109 33.333 4.10 0.00 0.00 3.67
540 541 9.271921 AGATTATAATGTGCCATCTATAGACCA 57.728 33.333 4.10 0.09 0.00 4.02
544 545 9.254133 CCGAAGATTATAATGTGCCATCTATAG 57.746 37.037 1.78 0.00 0.00 1.31
545 546 8.204160 CCCGAAGATTATAATGTGCCATCTATA 58.796 37.037 1.78 0.00 0.00 1.31
546 547 7.050377 CCCGAAGATTATAATGTGCCATCTAT 58.950 38.462 1.78 0.00 0.00 1.98
547 548 6.013725 ACCCGAAGATTATAATGTGCCATCTA 60.014 38.462 1.78 0.00 0.00 1.98
548 549 5.221925 ACCCGAAGATTATAATGTGCCATCT 60.222 40.000 1.78 0.00 0.00 2.90
549 550 5.003804 ACCCGAAGATTATAATGTGCCATC 58.996 41.667 1.78 0.00 0.00 3.51
550 551 4.985538 ACCCGAAGATTATAATGTGCCAT 58.014 39.130 1.78 0.00 0.00 4.40
551 552 4.431416 ACCCGAAGATTATAATGTGCCA 57.569 40.909 1.78 0.00 0.00 4.92
552 553 5.638234 GTCTACCCGAAGATTATAATGTGCC 59.362 44.000 1.78 0.00 0.00 5.01
553 554 6.145696 GTGTCTACCCGAAGATTATAATGTGC 59.854 42.308 1.78 0.00 0.00 4.57
597 598 6.459573 CGGCCTGCTTGTATTTATTGTGTTAT 60.460 38.462 0.00 0.00 0.00 1.89
598 599 5.163703 CGGCCTGCTTGTATTTATTGTGTTA 60.164 40.000 0.00 0.00 0.00 2.41
599 600 4.380444 CGGCCTGCTTGTATTTATTGTGTT 60.380 41.667 0.00 0.00 0.00 3.32
610 611 4.617253 AATATCATACGGCCTGCTTGTA 57.383 40.909 0.00 0.00 0.00 2.41
634 635 8.651589 TTATCTAGGTTCAACTCTCTGAGAAA 57.348 34.615 8.95 0.00 33.32 2.52
646 647 6.161381 GGACACGAGTTTTATCTAGGTTCAA 58.839 40.000 0.00 0.00 0.00 2.69
647 648 5.337009 GGGACACGAGTTTTATCTAGGTTCA 60.337 44.000 0.00 0.00 0.00 3.18
754 762 3.797039 CTGATTTTAGAGTGATGGCGGA 58.203 45.455 0.00 0.00 0.00 5.54
760 768 5.189180 GTTCCTGGCTGATTTTAGAGTGAT 58.811 41.667 0.00 0.00 0.00 3.06
767 775 1.083489 CGCGTTCCTGGCTGATTTTA 58.917 50.000 0.00 0.00 0.00 1.52
770 778 0.392998 ATTCGCGTTCCTGGCTGATT 60.393 50.000 5.77 0.00 0.00 2.57
816 825 7.882791 TGAAGTGAGAACATAAATGTGGTACAT 59.117 33.333 0.00 0.00 44.52 2.29
850 860 9.438228 TTTCCGTATGTTTCACTGATATACAAA 57.562 29.630 0.00 0.00 0.00 2.83
851 861 9.438228 TTTTCCGTATGTTTCACTGATATACAA 57.562 29.630 0.00 0.00 0.00 2.41
852 862 9.607988 ATTTTCCGTATGTTTCACTGATATACA 57.392 29.630 0.00 0.00 0.00 2.29
867 883 5.168856 CGCGAATACACAAATTTTCCGTATG 59.831 40.000 0.00 0.00 0.00 2.39
937 953 5.811399 AAGCGTACTTGCATATTGCTTAA 57.189 34.783 10.70 0.00 45.31 1.85
965 981 3.342627 CGAAAGCCGTGACCGCAA 61.343 61.111 0.00 0.00 0.00 4.85
977 993 2.860735 CCGATTTAGGCAGACTCGAAAG 59.139 50.000 0.00 0.00 0.00 2.62
1031 1047 2.131776 TTGGTCTGGTTTGGTTCGTT 57.868 45.000 0.00 0.00 0.00 3.85
1161 1179 0.179134 CGTTCCACTCCTCGATCCAC 60.179 60.000 0.00 0.00 0.00 4.02
1185 1203 3.418744 GAGCTCGAGGTTCTCCCGC 62.419 68.421 19.66 0.00 38.74 6.13
1328 1346 3.318313 AGGGTTTGGAGAAGAGAGAACA 58.682 45.455 0.00 0.00 0.00 3.18
1540 1560 3.840209 CGCACATGTGAGAACAAAATACG 59.160 43.478 29.80 14.00 31.84 3.06
1666 1690 7.015487 TCCCCATTCAATCCAAGCATAAATAAG 59.985 37.037 0.00 0.00 0.00 1.73
1683 1707 3.007940 CGCCTGATATTACTCCCCATTCA 59.992 47.826 0.00 0.00 0.00 2.57
1684 1708 3.260884 TCGCCTGATATTACTCCCCATTC 59.739 47.826 0.00 0.00 0.00 2.67
1755 1781 7.105588 GGGCAAATAATCCATTTTCTTCAACT 58.894 34.615 0.00 0.00 34.49 3.16
1756 1782 6.316140 GGGGCAAATAATCCATTTTCTTCAAC 59.684 38.462 0.00 0.00 34.49 3.18
1757 1783 6.013032 TGGGGCAAATAATCCATTTTCTTCAA 60.013 34.615 0.00 0.00 34.49 2.69
1758 1784 5.486775 TGGGGCAAATAATCCATTTTCTTCA 59.513 36.000 0.00 0.00 34.49 3.02
1759 1785 5.817296 GTGGGGCAAATAATCCATTTTCTTC 59.183 40.000 0.00 0.00 34.49 2.87
1760 1786 5.488561 AGTGGGGCAAATAATCCATTTTCTT 59.511 36.000 0.00 0.00 34.49 2.52
1761 1787 5.032170 AGTGGGGCAAATAATCCATTTTCT 58.968 37.500 0.00 0.00 34.49 2.52
1762 1788 5.357742 AGTGGGGCAAATAATCCATTTTC 57.642 39.130 0.00 0.00 34.49 2.29
1763 1789 5.488561 AGAAGTGGGGCAAATAATCCATTTT 59.511 36.000 0.00 0.00 34.49 1.82
1764 1790 5.032170 AGAAGTGGGGCAAATAATCCATTT 58.968 37.500 0.00 0.00 37.32 2.32
1765 1791 4.623863 AGAAGTGGGGCAAATAATCCATT 58.376 39.130 0.00 0.00 0.00 3.16
1766 1792 4.270317 AGAAGTGGGGCAAATAATCCAT 57.730 40.909 0.00 0.00 0.00 3.41
1767 1793 3.756082 AGAAGTGGGGCAAATAATCCA 57.244 42.857 0.00 0.00 0.00 3.41
1768 1794 5.201243 AGTTAGAAGTGGGGCAAATAATCC 58.799 41.667 0.00 0.00 0.00 3.01
1769 1795 6.775594 AAGTTAGAAGTGGGGCAAATAATC 57.224 37.500 0.00 0.00 0.00 1.75
1770 1796 6.723977 TCAAAGTTAGAAGTGGGGCAAATAAT 59.276 34.615 0.00 0.00 0.00 1.28
1771 1797 6.071984 TCAAAGTTAGAAGTGGGGCAAATAA 58.928 36.000 0.00 0.00 0.00 1.40
1772 1798 5.636123 TCAAAGTTAGAAGTGGGGCAAATA 58.364 37.500 0.00 0.00 0.00 1.40
1773 1799 4.479158 TCAAAGTTAGAAGTGGGGCAAAT 58.521 39.130 0.00 0.00 0.00 2.32
1774 1800 3.904717 TCAAAGTTAGAAGTGGGGCAAA 58.095 40.909 0.00 0.00 0.00 3.68
1775 1801 3.586470 TCAAAGTTAGAAGTGGGGCAA 57.414 42.857 0.00 0.00 0.00 4.52
1776 1802 3.073798 TGATCAAAGTTAGAAGTGGGGCA 59.926 43.478 0.00 0.00 0.00 5.36
1777 1803 3.686016 TGATCAAAGTTAGAAGTGGGGC 58.314 45.455 0.00 0.00 0.00 5.80
1778 1804 6.624423 CAAATGATCAAAGTTAGAAGTGGGG 58.376 40.000 0.00 0.00 0.00 4.96
1779 1805 6.095377 GCAAATGATCAAAGTTAGAAGTGGG 58.905 40.000 0.00 0.00 0.00 4.61
1780 1806 6.095377 GGCAAATGATCAAAGTTAGAAGTGG 58.905 40.000 0.00 0.00 0.00 4.00
1781 1807 6.680810 TGGCAAATGATCAAAGTTAGAAGTG 58.319 36.000 0.00 0.00 0.00 3.16
1782 1808 6.899393 TGGCAAATGATCAAAGTTAGAAGT 57.101 33.333 0.00 0.00 0.00 3.01
1788 1814 9.590451 CAACTAATATGGCAAATGATCAAAGTT 57.410 29.630 0.00 0.00 0.00 2.66
1789 1815 8.970020 TCAACTAATATGGCAAATGATCAAAGT 58.030 29.630 0.00 0.00 0.00 2.66
1790 1816 9.806203 TTCAACTAATATGGCAAATGATCAAAG 57.194 29.630 0.00 0.00 0.00 2.77
1791 1817 9.585099 GTTCAACTAATATGGCAAATGATCAAA 57.415 29.630 0.00 0.00 0.00 2.69
1792 1818 8.747471 TGTTCAACTAATATGGCAAATGATCAA 58.253 29.630 0.00 0.00 0.00 2.57
1793 1819 8.190122 GTGTTCAACTAATATGGCAAATGATCA 58.810 33.333 0.00 0.00 0.00 2.92
1794 1820 7.649306 GGTGTTCAACTAATATGGCAAATGATC 59.351 37.037 0.00 0.00 0.00 2.92
1795 1821 7.417797 GGGTGTTCAACTAATATGGCAAATGAT 60.418 37.037 0.00 0.00 0.00 2.45
1796 1822 6.127479 GGGTGTTCAACTAATATGGCAAATGA 60.127 38.462 0.00 0.00 0.00 2.57
1797 1823 6.042143 GGGTGTTCAACTAATATGGCAAATG 58.958 40.000 0.00 0.00 0.00 2.32
1798 1824 5.957774 AGGGTGTTCAACTAATATGGCAAAT 59.042 36.000 0.00 0.00 0.00 2.32
1799 1825 5.184864 CAGGGTGTTCAACTAATATGGCAAA 59.815 40.000 0.00 0.00 0.00 3.68
1800 1826 4.704540 CAGGGTGTTCAACTAATATGGCAA 59.295 41.667 0.00 0.00 0.00 4.52
1801 1827 4.269183 CAGGGTGTTCAACTAATATGGCA 58.731 43.478 0.00 0.00 0.00 4.92
1802 1828 3.632145 CCAGGGTGTTCAACTAATATGGC 59.368 47.826 0.00 0.00 0.00 4.40
1803 1829 4.855340 ACCAGGGTGTTCAACTAATATGG 58.145 43.478 0.00 0.00 0.00 2.74
1804 1830 8.519799 AAATACCAGGGTGTTCAACTAATATG 57.480 34.615 0.06 0.00 0.00 1.78
1807 1833 9.541884 AATTAAATACCAGGGTGTTCAACTAAT 57.458 29.630 0.06 0.00 0.00 1.73
1808 1834 8.943594 AATTAAATACCAGGGTGTTCAACTAA 57.056 30.769 0.06 0.00 0.00 2.24
1809 1835 8.943594 AAATTAAATACCAGGGTGTTCAACTA 57.056 30.769 0.06 0.00 0.00 2.24
1816 1842 8.531146 CAGAATCAAAATTAAATACCAGGGTGT 58.469 33.333 0.06 0.00 0.00 4.16
1832 1858 3.118482 TGCTTGCAAACCCAGAATCAAAA 60.118 39.130 0.00 0.00 0.00 2.44
1833 1859 2.433604 TGCTTGCAAACCCAGAATCAAA 59.566 40.909 0.00 0.00 0.00 2.69
1846 1872 4.041049 CAGTAAAACGTCAATGCTTGCAA 58.959 39.130 0.00 0.00 0.00 4.08
1885 1911 5.067936 CGATAGAACTCCCAATACACTCAGT 59.932 44.000 0.00 0.00 39.76 3.41
1917 1964 6.643388 TCATCTGAACTGCTTAGAAATAGCA 58.357 36.000 0.00 0.00 45.78 3.49
1918 1965 7.727331 ATCATCTGAACTGCTTAGAAATAGC 57.273 36.000 0.00 0.00 39.10 2.97
1922 1969 9.671279 TCAAATATCATCTGAACTGCTTAGAAA 57.329 29.630 0.00 0.00 0.00 2.52
1923 1970 9.842775 ATCAAATATCATCTGAACTGCTTAGAA 57.157 29.630 0.00 0.00 0.00 2.10
1924 1971 9.842775 AATCAAATATCATCTGAACTGCTTAGA 57.157 29.630 0.00 0.00 0.00 2.10
1925 1972 9.880064 CAATCAAATATCATCTGAACTGCTTAG 57.120 33.333 0.00 0.00 0.00 2.18
1926 1973 9.399797 ACAATCAAATATCATCTGAACTGCTTA 57.600 29.630 0.00 0.00 0.00 3.09
1927 1974 8.289939 ACAATCAAATATCATCTGAACTGCTT 57.710 30.769 0.00 0.00 0.00 3.91
1928 1975 7.876936 ACAATCAAATATCATCTGAACTGCT 57.123 32.000 0.00 0.00 0.00 4.24
1987 2035 1.414919 AGGACACTGCACCTAACGAAA 59.585 47.619 0.00 0.00 34.47 3.46
1991 2039 3.195825 ACTGATAGGACACTGCACCTAAC 59.804 47.826 5.02 3.65 41.27 2.34
1996 2044 5.106673 GGTAAAAACTGATAGGACACTGCAC 60.107 44.000 0.00 0.00 0.00 4.57
2094 2142 6.805713 TCATATCTAGCAAACATCGACTCAA 58.194 36.000 0.00 0.00 0.00 3.02
2095 2143 6.391227 TCATATCTAGCAAACATCGACTCA 57.609 37.500 0.00 0.00 0.00 3.41
2100 2148 8.539770 AAAGGTATCATATCTAGCAAACATCG 57.460 34.615 0.00 0.00 0.00 3.84
2105 2153 8.605947 AGCCATAAAGGTATCATATCTAGCAAA 58.394 33.333 0.00 0.00 40.61 3.68
2135 2183 1.653151 GCCGTTAGGAGGATCACAAC 58.347 55.000 0.00 0.00 41.02 3.32
2145 2193 1.551883 GGACAACTTAGGCCGTTAGGA 59.448 52.381 0.00 0.00 41.02 2.94
2161 2209 7.338703 ACATACTAGTCGAATAAACTGAGGACA 59.661 37.037 0.00 0.00 0.00 4.02
2181 2229 4.392921 AAGCGCATACAGAGAACATACT 57.607 40.909 11.47 0.00 0.00 2.12
2191 2239 2.032894 CCCGAACATAAAGCGCATACAG 60.033 50.000 11.47 0.00 0.00 2.74
2209 2257 3.030652 GTCACAAACTGTGGCCCG 58.969 61.111 0.00 0.00 46.55 6.13
2234 2282 7.331791 TGCAAGTACACCACATATGTATGTAA 58.668 34.615 23.72 12.13 44.57 2.41
2235 2283 6.879400 TGCAAGTACACCACATATGTATGTA 58.121 36.000 20.47 20.47 44.57 2.29
2237 2285 6.291067 CTGCAAGTACACCACATATGTATG 57.709 41.667 8.32 12.31 35.11 2.39
2257 2307 4.649977 TGTACACGTACAAACAAAACTGC 58.350 39.130 7.56 0.00 42.49 4.40
2309 2359 5.925397 TGAATGTTGTGAAATTGGCACATAC 59.075 36.000 13.28 13.50 44.81 2.39
2393 2443 7.545965 ACAGTTCTCACTAAAATTCATCTACCG 59.454 37.037 0.00 0.00 0.00 4.02
2402 2452 7.639113 TTTCACCACAGTTCTCACTAAAATT 57.361 32.000 0.00 0.00 0.00 1.82
2472 2522 9.686683 ACAAATATGCCATTAACTCTAGAAAGT 57.313 29.630 0.00 0.00 0.00 2.66
2475 2525 9.905713 AGAACAAATATGCCATTAACTCTAGAA 57.094 29.630 0.00 0.00 0.00 2.10
2495 2545 3.683365 TGACATGCTCTGCTAGAACAA 57.317 42.857 0.00 0.00 0.00 2.83
2525 2576 9.681692 CAAAATGACAGTCAGATATGTTTCAAA 57.318 29.630 9.64 0.00 0.00 2.69
2537 2588 8.260270 TCACTTCATATCAAAATGACAGTCAG 57.740 34.615 9.64 0.00 35.63 3.51
2557 2608 8.027524 ACATATCCAATACTCATGTCTCACTT 57.972 34.615 0.00 0.00 0.00 3.16
2558 2609 7.288621 TGACATATCCAATACTCATGTCTCACT 59.711 37.037 12.63 0.00 43.70 3.41
2559 2610 7.436933 TGACATATCCAATACTCATGTCTCAC 58.563 38.462 12.63 0.00 43.70 3.51
2560 2611 7.601705 TGACATATCCAATACTCATGTCTCA 57.398 36.000 12.63 0.00 43.70 3.27
2561 2612 7.064371 GCATGACATATCCAATACTCATGTCTC 59.936 40.741 12.63 1.60 43.70 3.36
2562 2613 6.877855 GCATGACATATCCAATACTCATGTCT 59.122 38.462 12.63 0.00 43.70 3.41
2563 2614 6.877855 AGCATGACATATCCAATACTCATGTC 59.122 38.462 0.00 6.15 43.64 3.06
2564 2615 6.653740 CAGCATGACATATCCAATACTCATGT 59.346 38.462 0.00 0.00 39.69 3.21
2565 2616 6.653740 ACAGCATGACATATCCAATACTCATG 59.346 38.462 0.00 0.00 39.69 3.07
2566 2617 6.653740 CACAGCATGACATATCCAATACTCAT 59.346 38.462 0.00 0.00 39.69 2.90
2567 2618 5.993441 CACAGCATGACATATCCAATACTCA 59.007 40.000 0.00 0.00 39.69 3.41
2568 2619 5.994054 ACACAGCATGACATATCCAATACTC 59.006 40.000 0.00 0.00 39.69 2.59
2569 2620 5.933617 ACACAGCATGACATATCCAATACT 58.066 37.500 0.00 0.00 39.69 2.12
2570 2621 7.624974 GCATACACAGCATGACATATCCAATAC 60.625 40.741 0.00 0.00 39.69 1.89
2571 2622 6.372381 GCATACACAGCATGACATATCCAATA 59.628 38.462 0.00 0.00 39.69 1.90
2572 2623 5.182570 GCATACACAGCATGACATATCCAAT 59.817 40.000 0.00 0.00 39.69 3.16
2573 2624 4.516321 GCATACACAGCATGACATATCCAA 59.484 41.667 0.00 0.00 39.69 3.53
2574 2625 4.067192 GCATACACAGCATGACATATCCA 58.933 43.478 0.00 0.00 39.69 3.41
2575 2626 3.438087 GGCATACACAGCATGACATATCC 59.562 47.826 0.00 0.00 39.69 2.59
2576 2627 4.067192 TGGCATACACAGCATGACATATC 58.933 43.478 0.00 0.00 36.48 1.63
2577 2628 4.070009 CTGGCATACACAGCATGACATAT 58.930 43.478 0.00 0.00 40.59 1.78
2578 2629 3.118298 ACTGGCATACACAGCATGACATA 60.118 43.478 0.00 0.00 40.59 2.29
2579 2630 2.294979 CTGGCATACACAGCATGACAT 58.705 47.619 0.00 0.00 40.59 3.06
2580 2631 1.003464 ACTGGCATACACAGCATGACA 59.997 47.619 0.00 0.00 39.12 3.58
2581 2632 1.742761 ACTGGCATACACAGCATGAC 58.257 50.000 0.00 0.00 39.69 3.06
2582 2633 3.843893 ATACTGGCATACACAGCATGA 57.156 42.857 0.00 0.00 39.69 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.