Multiple sequence alignment - TraesCS3D01G285600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G285600 chr3D 100.000 3600 0 0 1 3600 394923654 394920055 0.000000e+00 6649.0
1 TraesCS3D01G285600 chr3D 100.000 30 0 0 3321 3350 527684974 527684945 5.020000e-04 56.5
2 TraesCS3D01G285600 chr3B 91.378 1937 88 31 1236 3148 519053314 519051433 0.000000e+00 2579.0
3 TraesCS3D01G285600 chr3B 81.748 652 38 41 626 1248 519053946 519053347 1.510000e-128 470.0
4 TraesCS3D01G285600 chr3B 88.312 385 26 6 1 366 519055242 519054858 9.170000e-121 444.0
5 TraesCS3D01G285600 chr3B 88.202 178 20 1 3415 3591 450834421 450834598 1.010000e-50 211.0
6 TraesCS3D01G285600 chr3A 90.427 2016 87 36 1182 3148 514307992 514306034 0.000000e+00 2556.0
7 TraesCS3D01G285600 chr3A 91.803 366 29 1 1 366 514309035 514308671 3.210000e-140 508.0
8 TraesCS3D01G285600 chr3A 90.572 297 8 7 626 902 514308451 514308155 3.390000e-100 375.0
9 TraesCS3D01G285600 chr3A 92.958 213 14 1 3389 3600 510716713 510716925 3.490000e-80 309.0
10 TraesCS3D01G285600 chr3A 93.846 130 4 1 981 1110 514308138 514308013 3.670000e-45 193.0
11 TraesCS3D01G285600 chr3A 88.542 96 6 2 508 603 514308597 514308507 1.060000e-20 111.0
12 TraesCS3D01G285600 chr3A 94.737 38 2 0 3155 3192 514305724 514305687 3.880000e-05 60.2
13 TraesCS3D01G285600 chr3A 92.857 42 2 1 366 406 602242967 602243008 3.880000e-05 60.2
14 TraesCS3D01G285600 chr3A 90.698 43 3 1 365 406 369526971 369526929 5.020000e-04 56.5
15 TraesCS3D01G285600 chr1B 92.788 208 14 1 3389 3595 134945499 134945706 2.100000e-77 300.0
16 TraesCS3D01G285600 chr1B 82.547 212 36 1 3389 3599 649329035 649328824 6.140000e-43 185.0
17 TraesCS3D01G285600 chr1B 89.130 46 4 1 362 406 398272858 398272903 5.020000e-04 56.5
18 TraesCS3D01G285600 chr1A 90.431 209 18 2 3389 3595 29019563 29019771 1.270000e-69 274.0
19 TraesCS3D01G285600 chr1A 87.745 204 24 1 3389 3591 266507310 266507513 1.670000e-58 237.0
20 TraesCS3D01G285600 chr1A 94.595 37 2 0 3322 3358 42550535 42550571 1.400000e-04 58.4
21 TraesCS3D01G285600 chrUn 88.732 213 22 2 3389 3600 69950041 69949830 3.570000e-65 259.0
22 TraesCS3D01G285600 chr7A 89.216 204 21 1 3389 3591 603083547 603083750 1.660000e-63 254.0
23 TraesCS3D01G285600 chr7A 92.857 42 2 1 366 406 726598340 726598299 3.880000e-05 60.2
24 TraesCS3D01G285600 chr7A 89.130 46 4 1 362 406 269038262 269038307 5.020000e-04 56.5
25 TraesCS3D01G285600 chr7B 85.377 212 29 2 3389 3599 644205652 644205442 6.050000e-53 219.0
26 TraesCS3D01G285600 chr4A 84.058 69 11 0 3322 3390 599914843 599914775 2.320000e-07 67.6
27 TraesCS3D01G285600 chr6B 84.375 64 9 1 3322 3385 693303473 693303411 1.080000e-05 62.1
28 TraesCS3D01G285600 chr2B 95.000 40 1 1 365 403 71315305 71315344 1.080000e-05 62.1
29 TraesCS3D01G285600 chr2B 85.246 61 6 3 343 400 12869549 12869489 3.880000e-05 60.2
30 TraesCS3D01G285600 chr6D 89.362 47 5 0 3322 3368 137796175 137796221 3.880000e-05 60.2
31 TraesCS3D01G285600 chr7D 90.698 43 3 1 365 406 321522488 321522446 5.020000e-04 56.5
32 TraesCS3D01G285600 chr5A 89.130 46 4 1 362 406 583720635 583720680 5.020000e-04 56.5
33 TraesCS3D01G285600 chr1D 82.540 63 11 0 3322 3384 43137254 43137316 5.020000e-04 56.5
34 TraesCS3D01G285600 chr4B 82.812 64 8 2 3322 3385 489379086 489379146 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G285600 chr3D 394920055 394923654 3599 True 6649.000000 6649 100.0000 1 3600 1 chr3D.!!$R1 3599
1 TraesCS3D01G285600 chr3B 519051433 519055242 3809 True 1164.333333 2579 87.1460 1 3148 3 chr3B.!!$R1 3147
2 TraesCS3D01G285600 chr3A 514305687 514309035 3348 True 633.866667 2556 91.6545 1 3192 6 chr3A.!!$R2 3191

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
910 1675 0.187606 TTATCGCCTCCTCCCTGCTA 59.812 55.0 0.0 0.0 0.0 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2734 3579 0.038709 GATCCAGCGGTGCTAGCTAG 60.039 60.0 16.84 16.84 44.06 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
190 191 4.875544 ATCGTTTGCGCTATTATTGTGT 57.124 36.364 9.73 0.00 38.14 3.72
220 221 4.092237 TCGTGGCAACTTTATGTATGTTCG 59.908 41.667 0.00 0.00 37.61 3.95
252 253 4.920376 ACAAACATTGTCGTTGGAAAGAG 58.080 39.130 6.26 0.00 40.56 2.85
261 262 1.264288 CGTTGGAAAGAGGAACTGCAC 59.736 52.381 0.00 0.00 41.55 4.57
263 264 0.884704 TGGAAAGAGGAACTGCACGC 60.885 55.000 0.00 0.00 41.55 5.34
328 348 1.134128 TGCAGTTTTGAGCTGGAGTCA 60.134 47.619 0.00 0.00 34.73 3.41
366 386 7.247728 TCATATAACGCTTGGTTTTCAACATC 58.752 34.615 0.00 0.00 40.09 3.06
367 387 3.791973 AACGCTTGGTTTTCAACATCA 57.208 38.095 0.00 0.00 34.41 3.07
368 388 3.354089 ACGCTTGGTTTTCAACATCAG 57.646 42.857 0.00 0.00 0.00 2.90
369 389 2.687935 ACGCTTGGTTTTCAACATCAGT 59.312 40.909 0.00 0.00 0.00 3.41
370 390 3.130340 ACGCTTGGTTTTCAACATCAGTT 59.870 39.130 0.00 0.00 38.88 3.16
371 391 4.111916 CGCTTGGTTTTCAACATCAGTTT 58.888 39.130 0.00 0.00 35.28 2.66
372 392 4.026640 CGCTTGGTTTTCAACATCAGTTTG 60.027 41.667 0.00 0.00 35.28 2.93
373 393 4.869861 GCTTGGTTTTCAACATCAGTTTGT 59.130 37.500 0.00 0.00 35.28 2.83
374 394 5.005682 GCTTGGTTTTCAACATCAGTTTGTC 59.994 40.000 0.00 0.00 35.28 3.18
375 395 5.913137 TGGTTTTCAACATCAGTTTGTCT 57.087 34.783 0.00 0.00 35.28 3.41
376 396 7.397892 TTGGTTTTCAACATCAGTTTGTCTA 57.602 32.000 0.00 0.00 35.28 2.59
377 397 7.397892 TGGTTTTCAACATCAGTTTGTCTAA 57.602 32.000 0.00 0.00 35.28 2.10
378 398 8.006298 TGGTTTTCAACATCAGTTTGTCTAAT 57.994 30.769 0.00 0.00 35.28 1.73
379 399 8.474025 TGGTTTTCAACATCAGTTTGTCTAATT 58.526 29.630 0.00 0.00 35.28 1.40
380 400 8.968242 GGTTTTCAACATCAGTTTGTCTAATTC 58.032 33.333 0.00 0.00 35.28 2.17
381 401 9.515020 GTTTTCAACATCAGTTTGTCTAATTCA 57.485 29.630 0.00 0.00 35.28 2.57
382 402 9.515020 TTTTCAACATCAGTTTGTCTAATTCAC 57.485 29.630 0.00 0.00 35.28 3.18
383 403 7.800155 TCAACATCAGTTTGTCTAATTCACA 57.200 32.000 0.00 0.00 35.28 3.58
384 404 8.394971 TCAACATCAGTTTGTCTAATTCACAT 57.605 30.769 0.00 0.00 35.28 3.21
385 405 8.849168 TCAACATCAGTTTGTCTAATTCACATT 58.151 29.630 0.00 0.00 35.28 2.71
386 406 9.467258 CAACATCAGTTTGTCTAATTCACATTT 57.533 29.630 0.00 0.00 35.28 2.32
481 1181 3.415212 TCCTGAGAAAAACAGAGGCATG 58.585 45.455 0.00 0.00 37.54 4.06
498 1198 3.100817 GCATGCATTTGACATGTACGAC 58.899 45.455 14.21 0.00 45.40 4.34
591 1291 3.890936 AAGTGCACTCGCTGGAGCC 62.891 63.158 21.95 0.00 44.48 4.70
611 1321 3.738481 GGCCCAGGGTGCATGGTA 61.738 66.667 7.55 0.00 35.96 3.25
639 1372 2.281484 GCCGGTGAGCCAGTGAAA 60.281 61.111 1.90 0.00 34.09 2.69
656 1398 3.434299 GTGAAATGAGCATTTTGGCTTGG 59.566 43.478 9.57 0.00 45.99 3.61
668 1410 4.021925 GCTTGGGAGTGGCCGAGT 62.022 66.667 0.00 0.00 37.63 4.18
733 1484 3.019564 AGTTTAATCATCAGCTGGCACC 58.980 45.455 15.13 0.00 0.00 5.01
902 1667 3.555527 GGTTTAACCTTATCGCCTCCT 57.444 47.619 6.92 0.00 34.73 3.69
903 1668 3.464907 GGTTTAACCTTATCGCCTCCTC 58.535 50.000 6.92 0.00 34.73 3.71
904 1669 3.464907 GTTTAACCTTATCGCCTCCTCC 58.535 50.000 0.00 0.00 0.00 4.30
905 1670 1.713297 TAACCTTATCGCCTCCTCCC 58.287 55.000 0.00 0.00 0.00 4.30
907 1672 0.760945 ACCTTATCGCCTCCTCCCTG 60.761 60.000 0.00 0.00 0.00 4.45
909 1674 1.075226 TTATCGCCTCCTCCCTGCT 60.075 57.895 0.00 0.00 0.00 4.24
910 1675 0.187606 TTATCGCCTCCTCCCTGCTA 59.812 55.000 0.00 0.00 0.00 3.49
911 1676 0.539901 TATCGCCTCCTCCCTGCTAC 60.540 60.000 0.00 0.00 0.00 3.58
913 1678 3.541713 GCCTCCTCCCTGCTACGG 61.542 72.222 0.00 0.00 0.00 4.02
914 1679 2.042843 CCTCCTCCCTGCTACGGT 60.043 66.667 0.00 0.00 0.00 4.83
915 1680 2.427245 CCTCCTCCCTGCTACGGTG 61.427 68.421 0.00 0.00 0.00 4.94
916 1681 3.075005 TCCTCCCTGCTACGGTGC 61.075 66.667 0.00 0.00 0.00 5.01
917 1682 4.514577 CCTCCCTGCTACGGTGCG 62.515 72.222 0.00 0.00 35.36 5.34
940 1705 3.667282 GCACAGGCACAGGCACAG 61.667 66.667 0.00 0.00 43.71 3.66
972 1741 0.457853 GATCGCGGTGTGAGTGCTTA 60.458 55.000 6.13 0.00 0.00 3.09
973 1742 0.736325 ATCGCGGTGTGAGTGCTTAC 60.736 55.000 6.13 0.00 0.00 2.34
974 1743 2.380410 CGCGGTGTGAGTGCTTACC 61.380 63.158 0.00 0.00 0.00 2.85
975 1744 1.004918 GCGGTGTGAGTGCTTACCT 60.005 57.895 0.00 0.00 0.00 3.08
976 1745 0.602905 GCGGTGTGAGTGCTTACCTT 60.603 55.000 0.00 0.00 0.00 3.50
977 1746 1.429463 CGGTGTGAGTGCTTACCTTC 58.571 55.000 0.00 0.00 0.00 3.46
978 1747 1.270094 CGGTGTGAGTGCTTACCTTCA 60.270 52.381 0.00 0.00 0.00 3.02
979 1748 2.417719 GGTGTGAGTGCTTACCTTCAG 58.582 52.381 0.00 0.00 0.00 3.02
985 1754 1.699634 AGTGCTTACCTTCAGGAAGCA 59.300 47.619 20.12 20.12 46.19 3.91
1007 1776 2.262915 CGATCCCTAGATGCCGGC 59.737 66.667 22.73 22.73 30.90 6.13
1111 1880 2.912986 GTGAGTGCACCATTCACGA 58.087 52.632 18.45 0.00 40.22 4.35
1112 1881 1.442769 GTGAGTGCACCATTCACGAT 58.557 50.000 18.45 0.00 40.22 3.73
1114 1883 2.226437 GTGAGTGCACCATTCACGATTT 59.774 45.455 18.45 0.00 40.22 2.17
1115 1884 2.483877 TGAGTGCACCATTCACGATTTC 59.516 45.455 14.63 0.00 39.31 2.17
1116 1885 2.483877 GAGTGCACCATTCACGATTTCA 59.516 45.455 14.63 0.00 39.31 2.69
1117 1886 2.226437 AGTGCACCATTCACGATTTCAC 59.774 45.455 14.63 0.00 39.31 3.18
1118 1887 1.196581 TGCACCATTCACGATTTCACG 59.803 47.619 0.00 0.00 39.31 4.35
1121 1890 1.271163 ACCATTCACGATTTCACGGGT 60.271 47.619 0.00 0.00 37.94 5.28
1122 1891 2.027929 ACCATTCACGATTTCACGGGTA 60.028 45.455 0.00 0.00 37.94 3.69
1123 1892 2.350498 CCATTCACGATTTCACGGGTAC 59.650 50.000 0.00 0.00 37.94 3.34
1124 1893 2.816204 TTCACGATTTCACGGGTACA 57.184 45.000 0.00 0.00 37.94 2.90
1125 1894 3.322211 TTCACGATTTCACGGGTACAT 57.678 42.857 0.00 0.00 37.94 2.29
1126 1895 2.612604 TCACGATTTCACGGGTACATG 58.387 47.619 0.00 0.00 37.94 3.21
1134 1903 3.336138 TCACGGGTACATGCATGTAAA 57.664 42.857 34.93 18.57 44.11 2.01
1140 1909 4.024893 CGGGTACATGCATGTAAATGACTC 60.025 45.833 34.93 25.32 44.11 3.36
1149 1918 4.682320 GCATGTAAATGACTCCTTCCCGTA 60.682 45.833 0.00 0.00 0.00 4.02
1151 1920 2.667473 AAATGACTCCTTCCCGTACG 57.333 50.000 8.69 8.69 0.00 3.67
1152 1921 1.553706 AATGACTCCTTCCCGTACGT 58.446 50.000 15.21 0.00 0.00 3.57
1153 1922 0.815734 ATGACTCCTTCCCGTACGTG 59.184 55.000 15.21 2.17 0.00 4.49
1154 1923 1.246056 TGACTCCTTCCCGTACGTGG 61.246 60.000 15.21 14.78 0.00 4.94
1156 1925 1.214589 CTCCTTCCCGTACGTGGTG 59.785 63.158 15.21 11.54 0.00 4.17
1157 1926 1.530013 CTCCTTCCCGTACGTGGTGT 61.530 60.000 15.21 0.00 0.00 4.16
1161 1933 0.032403 TTCCCGTACGTGGTGTCTTG 59.968 55.000 15.21 0.00 0.00 3.02
1173 1945 1.000060 GGTGTCTTGCATTGCATGTGT 60.000 47.619 20.16 0.00 38.76 3.72
1174 1946 2.546373 GGTGTCTTGCATTGCATGTGTT 60.546 45.455 20.16 0.00 38.76 3.32
1175 1947 2.727798 GTGTCTTGCATTGCATGTGTTC 59.272 45.455 20.16 11.88 38.76 3.18
1176 1948 2.624364 TGTCTTGCATTGCATGTGTTCT 59.376 40.909 20.16 0.00 38.76 3.01
1177 1949 3.819902 TGTCTTGCATTGCATGTGTTCTA 59.180 39.130 20.16 0.55 38.76 2.10
1178 1950 4.083164 TGTCTTGCATTGCATGTGTTCTAG 60.083 41.667 20.16 9.68 38.76 2.43
1179 1951 3.441222 TCTTGCATTGCATGTGTTCTAGG 59.559 43.478 20.16 0.00 38.76 3.02
1180 1952 1.473677 TGCATTGCATGTGTTCTAGGC 59.526 47.619 7.38 0.00 31.71 3.93
1196 1968 6.095720 TGTTCTAGGCTTCTAGCTCTAACTTC 59.904 42.308 0.00 0.00 41.99 3.01
1212 1984 3.626028 ACTTCGTTTGCCAAACTGATC 57.374 42.857 17.51 0.00 39.23 2.92
1267 2082 2.515926 CATCGATGGATCCGAAGTGT 57.484 50.000 17.96 0.00 39.62 3.55
1290 2110 4.083581 AGAAAGTTTGCACATATGTCGC 57.916 40.909 17.91 17.91 0.00 5.19
1322 2142 1.349627 GACTCGTCCATGCATTGCG 59.650 57.895 0.00 1.91 0.00 4.85
1388 2208 2.528127 TGGGAGGCGTCCAGGAAA 60.528 61.111 25.86 4.10 46.07 3.13
1601 2421 1.156736 CCATGGTGTTCGACAAGTCC 58.843 55.000 2.57 0.00 0.00 3.85
1810 2645 3.580458 TCCCTCTGTTTCTCTTCCTTCTG 59.420 47.826 0.00 0.00 0.00 3.02
1965 2803 3.092192 CTGTGCTTGATCGCCGCAG 62.092 63.158 3.95 5.25 33.84 5.18
2279 3124 3.777925 CCGCTCGTCAACTTGCCG 61.778 66.667 0.00 0.00 0.00 5.69
2298 3143 1.470805 CGAATGCCTGACCGTATGTGA 60.471 52.381 0.00 0.00 0.00 3.58
2299 3144 1.933853 GAATGCCTGACCGTATGTGAC 59.066 52.381 0.00 0.00 0.00 3.67
2314 3159 3.061674 GACGCGTGTCGATGTGTC 58.938 61.111 20.70 11.45 40.49 3.67
2315 3160 2.430244 ACGCGTGTCGATGTGTCC 60.430 61.111 12.93 0.00 41.67 4.02
2316 3161 3.532792 CGCGTGTCGATGTGTCCG 61.533 66.667 0.00 0.00 41.67 4.79
2317 3162 3.838795 GCGTGTCGATGTGTCCGC 61.839 66.667 0.00 0.00 0.00 5.54
2318 3163 2.126463 CGTGTCGATGTGTCCGCT 60.126 61.111 0.00 0.00 0.00 5.52
2319 3164 2.152699 CGTGTCGATGTGTCCGCTC 61.153 63.158 0.00 0.00 0.00 5.03
2320 3165 2.152699 GTGTCGATGTGTCCGCTCG 61.153 63.158 0.00 0.00 0.00 5.03
2321 3166 2.178521 GTCGATGTGTCCGCTCGT 59.821 61.111 0.00 0.00 34.19 4.18
2322 3167 2.152699 GTCGATGTGTCCGCTCGTG 61.153 63.158 0.00 0.00 34.19 4.35
2323 3168 3.545481 CGATGTGTCCGCTCGTGC 61.545 66.667 0.00 0.00 0.00 5.34
2546 3391 4.351938 CCGAGTTCCGCGTCCACA 62.352 66.667 4.92 0.00 36.84 4.17
2548 3393 1.138036 CGAGTTCCGCGTCCACATA 59.862 57.895 4.92 0.00 0.00 2.29
2560 3405 3.094386 CCACATATTCCGGGTGGTG 57.906 57.895 16.30 10.91 45.48 4.17
2618 3463 1.716172 GCTTTAGCTGTACGCCTGC 59.284 57.895 0.00 0.00 40.39 4.85
2624 3469 2.332063 AGCTGTACGCCTGCAATTAT 57.668 45.000 6.15 0.00 40.25 1.28
2694 3539 4.435425 TCCCAACGGATAATTACTGTTCG 58.565 43.478 8.44 0.00 35.09 3.95
2696 3541 4.506654 CCCAACGGATAATTACTGTTCGAG 59.493 45.833 8.44 0.00 35.09 4.04
2734 3579 7.065443 GGTGTCAACCAATACTGGAAATAGTAC 59.935 40.741 0.00 0.00 46.92 2.73
2797 3644 5.643664 TGCAATGCAGTAATTTAAGCTGAG 58.356 37.500 2.72 0.00 33.32 3.35
2804 3651 4.935808 CAGTAATTTAAGCTGAGGACCGTT 59.064 41.667 0.00 0.00 32.39 4.44
2823 3670 3.377172 CGTTGGAAGTGTTTTCTCCTTGT 59.623 43.478 0.00 0.00 0.00 3.16
2856 3703 6.604795 CCTGGTGAATGAAGTATCCAAGAAAT 59.395 38.462 0.00 0.00 0.00 2.17
2976 3823 4.681978 GAACGCAGCCTCACCGGT 62.682 66.667 0.00 0.00 34.25 5.28
3026 3876 1.704628 ACAGGTGGACATGATGTGGAA 59.295 47.619 1.23 0.00 0.00 3.53
3062 3912 6.999705 TCCTTTCTTTACCCACTTGTACTA 57.000 37.500 0.00 0.00 0.00 1.82
3072 3922 3.614092 CCACTTGTACTAGTCGTCCCTA 58.386 50.000 7.02 0.00 0.00 3.53
3077 3927 3.347216 TGTACTAGTCGTCCCTACCAAC 58.653 50.000 0.00 0.00 0.00 3.77
3148 3998 1.885887 TCGGCAAAAGTTGATTGGGAG 59.114 47.619 0.00 0.00 0.00 4.30
3149 3999 1.669795 CGGCAAAAGTTGATTGGGAGC 60.670 52.381 0.00 0.00 0.00 4.70
3150 4000 1.669795 GGCAAAAGTTGATTGGGAGCG 60.670 52.381 0.00 0.00 0.00 5.03
3183 4336 2.957402 TGTTTGGACCTGCTTGATCT 57.043 45.000 0.00 0.00 0.00 2.75
3184 4337 3.228188 TGTTTGGACCTGCTTGATCTT 57.772 42.857 0.00 0.00 0.00 2.40
3192 4345 4.384647 GGACCTGCTTGATCTTGGTCTAAT 60.385 45.833 16.41 0.00 44.60 1.73
3193 4346 4.521146 ACCTGCTTGATCTTGGTCTAATG 58.479 43.478 0.00 0.00 0.00 1.90
3194 4347 3.881688 CCTGCTTGATCTTGGTCTAATGG 59.118 47.826 0.00 0.00 0.00 3.16
3195 4348 4.521146 CTGCTTGATCTTGGTCTAATGGT 58.479 43.478 0.00 0.00 0.00 3.55
3196 4349 4.264253 TGCTTGATCTTGGTCTAATGGTG 58.736 43.478 0.00 0.00 0.00 4.17
3197 4350 4.263462 TGCTTGATCTTGGTCTAATGGTGT 60.263 41.667 0.00 0.00 0.00 4.16
3198 4351 4.702131 GCTTGATCTTGGTCTAATGGTGTT 59.298 41.667 0.00 0.00 0.00 3.32
3199 4352 5.183904 GCTTGATCTTGGTCTAATGGTGTTT 59.816 40.000 0.00 0.00 0.00 2.83
3200 4353 6.573664 TTGATCTTGGTCTAATGGTGTTTG 57.426 37.500 0.00 0.00 0.00 2.93
3201 4354 5.630121 TGATCTTGGTCTAATGGTGTTTGT 58.370 37.500 0.00 0.00 0.00 2.83
3202 4355 5.473162 TGATCTTGGTCTAATGGTGTTTGTG 59.527 40.000 0.00 0.00 0.00 3.33
3203 4356 4.141287 TCTTGGTCTAATGGTGTTTGTGG 58.859 43.478 0.00 0.00 0.00 4.17
3204 4357 2.235016 TGGTCTAATGGTGTTTGTGGC 58.765 47.619 0.00 0.00 0.00 5.01
3205 4358 2.235016 GGTCTAATGGTGTTTGTGGCA 58.765 47.619 0.00 0.00 0.00 4.92
3206 4359 2.030274 GGTCTAATGGTGTTTGTGGCAC 60.030 50.000 11.55 11.55 36.22 5.01
3207 4360 2.884639 GTCTAATGGTGTTTGTGGCACT 59.115 45.455 19.83 0.00 37.07 4.40
3208 4361 3.317993 GTCTAATGGTGTTTGTGGCACTT 59.682 43.478 19.83 4.47 37.07 3.16
3209 4362 2.600470 AATGGTGTTTGTGGCACTTG 57.400 45.000 19.83 0.00 37.07 3.16
3210 4363 1.484038 ATGGTGTTTGTGGCACTTGT 58.516 45.000 19.83 0.00 37.07 3.16
3211 4364 0.529833 TGGTGTTTGTGGCACTTGTG 59.470 50.000 19.83 0.00 37.07 3.33
3212 4365 0.179113 GGTGTTTGTGGCACTTGTGG 60.179 55.000 19.83 0.00 37.07 4.17
3213 4366 0.179113 GTGTTTGTGGCACTTGTGGG 60.179 55.000 19.83 0.00 34.30 4.61
3214 4367 1.326213 TGTTTGTGGCACTTGTGGGG 61.326 55.000 19.83 0.00 0.00 4.96
3215 4368 1.760086 TTTGTGGCACTTGTGGGGG 60.760 57.895 19.83 0.00 0.00 5.40
3216 4369 4.912395 TGTGGCACTTGTGGGGGC 62.912 66.667 19.83 0.00 0.00 5.80
3217 4370 4.912395 GTGGCACTTGTGGGGGCA 62.912 66.667 11.13 0.00 34.48 5.36
3218 4371 3.913445 TGGCACTTGTGGGGGCAT 61.913 61.111 2.81 0.00 31.66 4.40
3219 4372 2.358619 GGCACTTGTGGGGGCATA 59.641 61.111 2.81 0.00 0.00 3.14
3220 4373 2.052104 GGCACTTGTGGGGGCATAC 61.052 63.158 2.81 0.00 0.00 2.39
3221 4374 2.406616 GCACTTGTGGGGGCATACG 61.407 63.158 2.81 0.00 0.00 3.06
3222 4375 1.298340 CACTTGTGGGGGCATACGA 59.702 57.895 0.00 0.00 0.00 3.43
3223 4376 0.322098 CACTTGTGGGGGCATACGAA 60.322 55.000 0.00 0.00 0.00 3.85
3224 4377 0.322187 ACTTGTGGGGGCATACGAAC 60.322 55.000 0.00 0.00 0.00 3.95
3225 4378 1.366111 CTTGTGGGGGCATACGAACG 61.366 60.000 0.00 0.00 0.00 3.95
3226 4379 3.199891 GTGGGGGCATACGAACGC 61.200 66.667 0.00 0.00 0.00 4.84
3232 4385 2.327940 GCATACGAACGCCATGGC 59.672 61.111 27.67 27.67 37.85 4.40
3233 4386 3.022287 CATACGAACGCCATGGCC 58.978 61.111 30.79 16.00 37.98 5.36
3234 4387 2.587753 ATACGAACGCCATGGCCG 60.588 61.111 30.79 28.11 37.98 6.13
3235 4388 3.379865 ATACGAACGCCATGGCCGT 62.380 57.895 32.31 32.31 39.19 5.68
3236 4389 2.862674 ATACGAACGCCATGGCCGTT 62.863 55.000 33.99 33.26 37.59 4.44
3237 4390 4.459331 CGAACGCCATGGCCGTTG 62.459 66.667 35.29 26.23 37.72 4.10
3238 4391 3.053291 GAACGCCATGGCCGTTGA 61.053 61.111 35.29 0.00 37.72 3.18
3239 4392 2.361104 AACGCCATGGCCGTTGAT 60.361 55.556 31.99 17.60 36.85 2.57
3240 4393 2.597117 GAACGCCATGGCCGTTGATG 62.597 60.000 35.29 22.48 37.72 3.07
3241 4394 3.891400 CGCCATGGCCGTTGATGG 61.891 66.667 30.79 14.23 41.95 3.51
3242 4395 3.530260 GCCATGGCCGTTGATGGG 61.530 66.667 27.24 7.80 39.75 4.00
3243 4396 2.275089 CCATGGCCGTTGATGGGA 59.725 61.111 11.28 0.00 36.26 4.37
3244 4397 1.152694 CCATGGCCGTTGATGGGAT 60.153 57.895 11.28 0.00 36.26 3.85
3245 4398 0.110295 CCATGGCCGTTGATGGGATA 59.890 55.000 11.28 0.00 36.26 2.59
3246 4399 1.527034 CATGGCCGTTGATGGGATAG 58.473 55.000 0.00 0.00 0.00 2.08
3247 4400 0.250901 ATGGCCGTTGATGGGATAGC 60.251 55.000 0.00 0.00 0.00 2.97
3248 4401 1.148273 GGCCGTTGATGGGATAGCA 59.852 57.895 0.00 0.00 0.00 3.49
3249 4402 0.886490 GGCCGTTGATGGGATAGCAG 60.886 60.000 0.00 0.00 0.00 4.24
3250 4403 0.179045 GCCGTTGATGGGATAGCAGT 60.179 55.000 0.00 0.00 0.00 4.40
3251 4404 1.070134 GCCGTTGATGGGATAGCAGTA 59.930 52.381 0.00 0.00 0.00 2.74
3252 4405 2.289694 GCCGTTGATGGGATAGCAGTAT 60.290 50.000 0.00 0.00 0.00 2.12
3253 4406 3.589988 CCGTTGATGGGATAGCAGTATC 58.410 50.000 0.00 0.00 35.19 2.24
3254 4407 3.245797 CGTTGATGGGATAGCAGTATCG 58.754 50.000 0.00 0.00 36.62 2.92
3255 4408 3.305403 CGTTGATGGGATAGCAGTATCGT 60.305 47.826 0.00 0.00 36.62 3.73
3256 4409 4.632153 GTTGATGGGATAGCAGTATCGTT 58.368 43.478 0.00 0.00 36.62 3.85
3257 4410 4.257267 TGATGGGATAGCAGTATCGTTG 57.743 45.455 0.00 0.00 36.62 4.10
3258 4411 2.526304 TGGGATAGCAGTATCGTTGC 57.474 50.000 0.00 0.00 41.83 4.17
3259 4412 1.760029 TGGGATAGCAGTATCGTTGCA 59.240 47.619 0.00 0.00 43.92 4.08
3260 4413 2.224042 TGGGATAGCAGTATCGTTGCAG 60.224 50.000 0.00 0.00 43.92 4.41
3261 4414 2.408050 GGATAGCAGTATCGTTGCAGG 58.592 52.381 0.00 0.00 43.92 4.85
3262 4415 2.035961 GGATAGCAGTATCGTTGCAGGA 59.964 50.000 0.00 0.00 43.92 3.86
3263 4416 2.871182 TAGCAGTATCGTTGCAGGAG 57.129 50.000 0.00 0.00 43.92 3.69
3264 4417 0.176680 AGCAGTATCGTTGCAGGAGG 59.823 55.000 0.00 0.00 43.92 4.30
3265 4418 0.108138 GCAGTATCGTTGCAGGAGGT 60.108 55.000 0.00 0.00 41.17 3.85
3266 4419 1.645034 CAGTATCGTTGCAGGAGGTG 58.355 55.000 0.00 0.00 0.00 4.00
3280 4433 2.493713 GAGGTGCTACTCCATGTACG 57.506 55.000 0.00 0.00 0.00 3.67
3281 4434 2.022195 GAGGTGCTACTCCATGTACGA 58.978 52.381 0.00 0.00 0.00 3.43
3282 4435 2.426024 GAGGTGCTACTCCATGTACGAA 59.574 50.000 0.00 0.00 0.00 3.85
3283 4436 2.427453 AGGTGCTACTCCATGTACGAAG 59.573 50.000 0.00 0.00 0.00 3.79
3284 4437 2.481449 GGTGCTACTCCATGTACGAAGG 60.481 54.545 0.00 0.00 0.00 3.46
3285 4438 1.754803 TGCTACTCCATGTACGAAGGG 59.245 52.381 0.00 0.00 0.00 3.95
3286 4439 2.029623 GCTACTCCATGTACGAAGGGA 58.970 52.381 0.00 0.00 0.00 4.20
3290 4443 3.712091 CTCCATGTACGAAGGGAGTAC 57.288 52.381 5.89 0.08 41.58 2.73
3296 4449 3.589495 GTACGAAGGGAGTACAAAGCT 57.411 47.619 0.00 0.00 42.77 3.74
3297 4450 3.922910 GTACGAAGGGAGTACAAAGCTT 58.077 45.455 0.00 0.00 42.77 3.74
3298 4451 2.767505 ACGAAGGGAGTACAAAGCTTG 58.232 47.619 0.00 0.00 0.00 4.01
3299 4452 2.076863 CGAAGGGAGTACAAAGCTTGG 58.923 52.381 0.00 0.00 34.12 3.61
3300 4453 1.813178 GAAGGGAGTACAAAGCTTGGC 59.187 52.381 0.00 0.00 34.12 4.52
3301 4454 0.321653 AGGGAGTACAAAGCTTGGCG 60.322 55.000 0.00 0.00 34.12 5.69
3302 4455 1.502190 GGAGTACAAAGCTTGGCGC 59.498 57.895 0.00 0.00 39.57 6.53
3303 4456 1.234615 GGAGTACAAAGCTTGGCGCA 61.235 55.000 10.83 0.00 42.61 6.09
3304 4457 0.591170 GAGTACAAAGCTTGGCGCAA 59.409 50.000 10.83 0.00 42.61 4.85
3305 4458 1.200020 GAGTACAAAGCTTGGCGCAAT 59.800 47.619 10.83 0.00 42.61 3.56
3306 4459 1.068333 AGTACAAAGCTTGGCGCAATG 60.068 47.619 10.83 0.09 42.61 2.82
3307 4460 0.388391 TACAAAGCTTGGCGCAATGC 60.388 50.000 14.56 14.56 42.61 3.56
3316 4469 2.181525 GCGCAATGCCGGTTTGAT 59.818 55.556 19.51 0.00 37.76 2.57
3317 4470 1.873572 GCGCAATGCCGGTTTGATC 60.874 57.895 19.51 8.66 37.76 2.92
3318 4471 1.505807 CGCAATGCCGGTTTGATCA 59.494 52.632 19.51 0.00 0.00 2.92
3319 4472 0.109365 CGCAATGCCGGTTTGATCAA 60.109 50.000 19.51 3.38 0.00 2.57
3320 4473 1.632422 GCAATGCCGGTTTGATCAAG 58.368 50.000 19.51 0.00 0.00 3.02
3321 4474 1.736696 GCAATGCCGGTTTGATCAAGG 60.737 52.381 19.51 7.99 0.00 3.61
3322 4475 1.818060 CAATGCCGGTTTGATCAAGGA 59.182 47.619 14.70 3.11 0.00 3.36
3323 4476 1.755179 ATGCCGGTTTGATCAAGGAG 58.245 50.000 14.70 7.54 0.00 3.69
3324 4477 0.690192 TGCCGGTTTGATCAAGGAGA 59.310 50.000 14.70 0.00 0.00 3.71
3325 4478 1.339055 TGCCGGTTTGATCAAGGAGAG 60.339 52.381 14.70 3.91 0.00 3.20
3326 4479 1.066143 GCCGGTTTGATCAAGGAGAGA 60.066 52.381 14.70 0.00 0.00 3.10
3327 4480 2.615493 GCCGGTTTGATCAAGGAGAGAA 60.615 50.000 14.70 0.00 0.00 2.87
3328 4481 3.878778 CCGGTTTGATCAAGGAGAGAAT 58.121 45.455 8.41 0.00 0.00 2.40
3329 4482 4.683400 GCCGGTTTGATCAAGGAGAGAATA 60.683 45.833 14.70 0.00 0.00 1.75
3330 4483 5.615289 CCGGTTTGATCAAGGAGAGAATAT 58.385 41.667 8.41 0.00 0.00 1.28
3331 4484 5.698545 CCGGTTTGATCAAGGAGAGAATATC 59.301 44.000 8.41 0.00 0.00 1.63
3332 4485 6.283694 CGGTTTGATCAAGGAGAGAATATCA 58.716 40.000 8.41 0.00 0.00 2.15
3333 4486 6.201806 CGGTTTGATCAAGGAGAGAATATCAC 59.798 42.308 8.41 0.00 0.00 3.06
3334 4487 7.050377 GGTTTGATCAAGGAGAGAATATCACA 58.950 38.462 8.41 0.00 0.00 3.58
3335 4488 7.718753 GGTTTGATCAAGGAGAGAATATCACAT 59.281 37.037 8.41 0.00 0.00 3.21
3336 4489 8.557864 GTTTGATCAAGGAGAGAATATCACATG 58.442 37.037 8.41 0.00 0.00 3.21
3337 4490 7.607615 TGATCAAGGAGAGAATATCACATGA 57.392 36.000 0.00 0.00 0.00 3.07
3338 4491 8.026396 TGATCAAGGAGAGAATATCACATGAA 57.974 34.615 0.00 0.00 0.00 2.57
3339 4492 8.488668 TGATCAAGGAGAGAATATCACATGAAA 58.511 33.333 0.00 0.00 0.00 2.69
3340 4493 9.334947 GATCAAGGAGAGAATATCACATGAAAA 57.665 33.333 0.00 0.00 0.00 2.29
3341 4494 8.498054 TCAAGGAGAGAATATCACATGAAAAC 57.502 34.615 0.00 0.00 0.00 2.43
3342 4495 7.554118 TCAAGGAGAGAATATCACATGAAAACC 59.446 37.037 0.00 0.00 0.00 3.27
3343 4496 6.962182 AGGAGAGAATATCACATGAAAACCA 58.038 36.000 0.00 0.00 0.00 3.67
3344 4497 7.405292 AGGAGAGAATATCACATGAAAACCAA 58.595 34.615 0.00 0.00 0.00 3.67
3345 4498 7.555554 AGGAGAGAATATCACATGAAAACCAAG 59.444 37.037 0.00 0.00 0.00 3.61
3346 4499 7.337942 GGAGAGAATATCACATGAAAACCAAGT 59.662 37.037 0.00 0.00 0.00 3.16
3347 4500 8.641498 AGAGAATATCACATGAAAACCAAGTT 57.359 30.769 0.00 0.00 0.00 2.66
3348 4501 9.082313 AGAGAATATCACATGAAAACCAAGTTT 57.918 29.630 0.00 0.00 37.34 2.66
3349 4502 9.346725 GAGAATATCACATGAAAACCAAGTTTC 57.653 33.333 0.00 0.00 34.43 2.78
3350 4503 8.023128 AGAATATCACATGAAAACCAAGTTTCG 58.977 33.333 0.00 0.00 39.85 3.46
3351 4504 4.300189 TCACATGAAAACCAAGTTTCGG 57.700 40.909 0.00 0.00 39.85 4.30
3352 4505 3.697045 TCACATGAAAACCAAGTTTCGGT 59.303 39.130 0.00 0.00 39.85 4.69
3353 4506 3.796178 CACATGAAAACCAAGTTTCGGTG 59.204 43.478 0.00 7.45 39.85 4.94
3354 4507 3.697045 ACATGAAAACCAAGTTTCGGTGA 59.303 39.130 0.00 0.00 39.85 4.02
3355 4508 4.158764 ACATGAAAACCAAGTTTCGGTGAA 59.841 37.500 0.00 0.00 39.85 3.18
3356 4509 4.785511 TGAAAACCAAGTTTCGGTGAAA 57.214 36.364 0.00 0.00 39.85 2.69
3357 4510 5.135508 TGAAAACCAAGTTTCGGTGAAAA 57.864 34.783 0.00 0.00 39.85 2.29
3358 4511 5.725362 TGAAAACCAAGTTTCGGTGAAAAT 58.275 33.333 0.00 0.00 39.85 1.82
3359 4512 5.808030 TGAAAACCAAGTTTCGGTGAAAATC 59.192 36.000 0.00 0.00 39.85 2.17
3360 4513 3.619233 ACCAAGTTTCGGTGAAAATCG 57.381 42.857 0.00 0.00 34.69 3.34
3361 4514 3.207778 ACCAAGTTTCGGTGAAAATCGA 58.792 40.909 0.00 0.00 34.69 3.59
3362 4515 3.002965 ACCAAGTTTCGGTGAAAATCGAC 59.997 43.478 0.00 0.00 34.69 4.20
3363 4516 3.215244 CAAGTTTCGGTGAAAATCGACG 58.785 45.455 0.00 0.00 33.14 5.12
3364 4517 2.746269 AGTTTCGGTGAAAATCGACGA 58.254 42.857 0.00 0.00 33.14 4.20
3365 4518 3.125316 AGTTTCGGTGAAAATCGACGAA 58.875 40.909 0.00 1.23 41.16 3.85
3366 4519 3.556775 AGTTTCGGTGAAAATCGACGAAA 59.443 39.130 11.86 11.86 46.96 3.46
3367 4520 4.533225 TTTCGGTGAAAATCGACGAAAA 57.467 36.364 13.07 0.00 46.40 2.29
3368 4521 4.735662 TTCGGTGAAAATCGACGAAAAT 57.264 36.364 0.00 0.00 40.12 1.82
3369 4522 4.735662 TCGGTGAAAATCGACGAAAATT 57.264 36.364 0.00 0.00 0.00 1.82
3370 4523 5.842619 TCGGTGAAAATCGACGAAAATTA 57.157 34.783 0.00 0.00 0.00 1.40
3371 4524 5.610975 TCGGTGAAAATCGACGAAAATTAC 58.389 37.500 0.00 0.00 0.00 1.89
3372 4525 4.486025 CGGTGAAAATCGACGAAAATTACG 59.514 41.667 0.00 0.00 0.00 3.18
3373 4526 5.376537 GGTGAAAATCGACGAAAATTACGT 58.623 37.500 0.00 9.71 46.58 3.57
3374 4527 5.279751 GGTGAAAATCGACGAAAATTACGTG 59.720 40.000 13.74 7.77 43.97 4.49
3375 4528 5.279751 GTGAAAATCGACGAAAATTACGTGG 59.720 40.000 13.74 12.59 43.97 4.94
3377 4530 5.594724 AAATCGACGAAAATTACGTGGAA 57.405 34.783 19.69 9.23 46.91 3.53
3378 4531 5.594724 AATCGACGAAAATTACGTGGAAA 57.405 34.783 19.69 5.80 46.91 3.13
3379 4532 4.373532 TCGACGAAAATTACGTGGAAAC 57.626 40.909 15.85 3.39 42.99 2.78
3380 4533 3.121396 TCGACGAAAATTACGTGGAAACG 60.121 43.478 15.85 12.09 42.99 3.60
3381 4534 3.121396 CGACGAAAATTACGTGGAAACGA 60.121 43.478 13.74 0.00 43.97 3.85
3382 4535 4.433283 CGACGAAAATTACGTGGAAACGAT 60.433 41.667 13.74 0.00 43.97 3.73
3383 4536 4.704457 ACGAAAATTACGTGGAAACGATG 58.296 39.130 5.12 0.00 42.37 3.84
3384 4537 4.211794 ACGAAAATTACGTGGAAACGATGT 59.788 37.500 5.12 0.00 42.37 3.06
3385 4538 5.404968 ACGAAAATTACGTGGAAACGATGTA 59.595 36.000 5.12 0.00 42.37 2.29
3386 4539 6.091169 ACGAAAATTACGTGGAAACGATGTAT 59.909 34.615 5.12 0.00 42.37 2.29
3387 4540 7.275341 ACGAAAATTACGTGGAAACGATGTATA 59.725 33.333 5.12 0.00 42.37 1.47
3388 4541 7.786118 CGAAAATTACGTGGAAACGATGTATAG 59.214 37.037 5.12 0.00 36.85 1.31
3389 4542 8.706492 AAAATTACGTGGAAACGATGTATAGA 57.294 30.769 5.12 0.00 36.85 1.98
3390 4543 8.882415 AAATTACGTGGAAACGATGTATAGAT 57.118 30.769 5.12 0.00 36.85 1.98
3391 4544 8.516811 AATTACGTGGAAACGATGTATAGATC 57.483 34.615 5.12 0.00 36.85 2.75
3392 4545 5.509716 ACGTGGAAACGATGTATAGATCA 57.490 39.130 10.24 0.00 36.85 2.92
3393 4546 5.898174 ACGTGGAAACGATGTATAGATCAA 58.102 37.500 10.24 0.00 36.85 2.57
3394 4547 6.513180 ACGTGGAAACGATGTATAGATCAAT 58.487 36.000 10.24 0.00 36.85 2.57
3395 4548 6.420903 ACGTGGAAACGATGTATAGATCAATG 59.579 38.462 10.24 0.00 36.85 2.82
3396 4549 6.128822 CGTGGAAACGATGTATAGATCAATGG 60.129 42.308 10.24 0.00 34.64 3.16
3397 4550 6.929049 GTGGAAACGATGTATAGATCAATGGA 59.071 38.462 10.24 0.00 0.00 3.41
3398 4551 7.604164 GTGGAAACGATGTATAGATCAATGGAT 59.396 37.037 10.24 0.00 36.13 3.41
3399 4552 8.811994 TGGAAACGATGTATAGATCAATGGATA 58.188 33.333 10.24 0.00 32.67 2.59
3400 4553 9.307121 GGAAACGATGTATAGATCAATGGATAG 57.693 37.037 10.24 0.00 32.67 2.08
3404 4557 8.637099 ACGATGTATAGATCAATGGATAGATGG 58.363 37.037 10.24 0.00 32.67 3.51
3405 4558 7.598118 CGATGTATAGATCAATGGATAGATGGC 59.402 40.741 10.24 0.00 32.67 4.40
3406 4559 7.738437 TGTATAGATCAATGGATAGATGGCA 57.262 36.000 0.00 0.00 32.67 4.92
3407 4560 7.559486 TGTATAGATCAATGGATAGATGGCAC 58.441 38.462 0.00 0.00 32.67 5.01
3408 4561 4.298103 AGATCAATGGATAGATGGCACC 57.702 45.455 0.00 0.00 32.67 5.01
3409 4562 3.654321 AGATCAATGGATAGATGGCACCA 59.346 43.478 0.00 0.00 32.67 4.17
3410 4563 4.291513 AGATCAATGGATAGATGGCACCAT 59.708 41.667 0.66 0.66 43.74 3.55
3411 4564 5.489997 AGATCAATGGATAGATGGCACCATA 59.510 40.000 6.97 0.00 41.47 2.74
3412 4565 5.784398 TCAATGGATAGATGGCACCATAT 57.216 39.130 6.97 1.57 41.47 1.78
3413 4566 5.748402 TCAATGGATAGATGGCACCATATC 58.252 41.667 6.97 3.18 41.47 1.63
3414 4567 3.893326 TGGATAGATGGCACCATATCG 57.107 47.619 1.19 0.00 36.70 2.92
3415 4568 3.440127 TGGATAGATGGCACCATATCGA 58.560 45.455 1.19 0.00 36.70 3.59
3416 4569 4.033009 TGGATAGATGGCACCATATCGAT 58.967 43.478 2.16 2.16 36.70 3.59
3417 4570 4.141869 TGGATAGATGGCACCATATCGATG 60.142 45.833 8.54 0.00 36.70 3.84
3418 4571 4.100035 GGATAGATGGCACCATATCGATGA 59.900 45.833 8.54 0.00 36.70 2.92
3419 4572 5.395657 GGATAGATGGCACCATATCGATGAA 60.396 44.000 8.54 0.00 36.70 2.57
3420 4573 4.356405 AGATGGCACCATATCGATGAAA 57.644 40.909 8.54 0.00 36.70 2.69
3421 4574 4.067896 AGATGGCACCATATCGATGAAAC 58.932 43.478 8.54 0.00 36.70 2.78
3422 4575 2.571212 TGGCACCATATCGATGAAACC 58.429 47.619 8.54 2.76 34.73 3.27
3423 4576 1.531149 GGCACCATATCGATGAAACCG 59.469 52.381 8.54 0.00 34.73 4.44
3424 4577 2.479837 GCACCATATCGATGAAACCGA 58.520 47.619 8.54 0.00 40.53 4.69
3425 4578 3.067106 GCACCATATCGATGAAACCGAT 58.933 45.455 8.54 0.00 46.82 4.18
3426 4579 3.120546 GCACCATATCGATGAAACCGATG 60.121 47.826 8.54 1.50 45.14 3.84
3427 4580 3.433274 CACCATATCGATGAAACCGATGG 59.567 47.826 16.18 16.18 45.14 3.51
3428 4581 3.002791 CCATATCGATGAAACCGATGGG 58.997 50.000 8.54 0.00 45.14 4.00
3429 4582 3.306710 CCATATCGATGAAACCGATGGGA 60.307 47.826 8.54 0.00 45.14 4.37
3430 4583 2.533266 ATCGATGAAACCGATGGGAG 57.467 50.000 0.00 0.00 44.06 4.30
3431 4584 0.179084 TCGATGAAACCGATGGGAGC 60.179 55.000 0.00 0.00 36.97 4.70
3432 4585 0.179073 CGATGAAACCGATGGGAGCT 60.179 55.000 0.00 0.00 36.97 4.09
3433 4586 1.587547 GATGAAACCGATGGGAGCTC 58.412 55.000 4.71 4.71 36.97 4.09
3434 4587 1.139853 GATGAAACCGATGGGAGCTCT 59.860 52.381 14.64 0.00 36.97 4.09
3435 4588 0.537188 TGAAACCGATGGGAGCTCTC 59.463 55.000 14.64 10.93 36.97 3.20
3436 4589 0.537188 GAAACCGATGGGAGCTCTCA 59.463 55.000 20.89 20.89 36.97 3.27
3437 4590 0.984230 AAACCGATGGGAGCTCTCAA 59.016 50.000 22.63 4.05 36.97 3.02
3438 4591 0.539051 AACCGATGGGAGCTCTCAAG 59.461 55.000 22.63 17.33 36.97 3.02
3439 4592 1.965754 ACCGATGGGAGCTCTCAAGC 61.966 60.000 22.63 14.80 42.31 4.01
3450 4603 3.484334 GCTCTCAAGCCAAACTCAATC 57.516 47.619 0.00 0.00 43.10 2.67
3451 4604 2.163211 GCTCTCAAGCCAAACTCAATCC 59.837 50.000 0.00 0.00 43.10 3.01
3452 4605 3.415212 CTCTCAAGCCAAACTCAATCCA 58.585 45.455 0.00 0.00 0.00 3.41
3453 4606 3.822735 CTCTCAAGCCAAACTCAATCCAA 59.177 43.478 0.00 0.00 0.00 3.53
3454 4607 4.410099 TCTCAAGCCAAACTCAATCCAAT 58.590 39.130 0.00 0.00 0.00 3.16
3455 4608 4.834496 TCTCAAGCCAAACTCAATCCAATT 59.166 37.500 0.00 0.00 0.00 2.32
3456 4609 6.009589 TCTCAAGCCAAACTCAATCCAATTA 58.990 36.000 0.00 0.00 0.00 1.40
3457 4610 6.151648 TCTCAAGCCAAACTCAATCCAATTAG 59.848 38.462 0.00 0.00 0.00 1.73
3458 4611 5.774690 TCAAGCCAAACTCAATCCAATTAGT 59.225 36.000 0.00 0.00 0.00 2.24
3459 4612 5.649782 AGCCAAACTCAATCCAATTAGTG 57.350 39.130 0.00 0.00 0.00 2.74
3460 4613 5.079643 AGCCAAACTCAATCCAATTAGTGT 58.920 37.500 0.00 0.00 0.00 3.55
3461 4614 5.183904 AGCCAAACTCAATCCAATTAGTGTC 59.816 40.000 0.00 0.00 0.00 3.67
3462 4615 5.631026 CCAAACTCAATCCAATTAGTGTCG 58.369 41.667 0.00 0.00 0.00 4.35
3463 4616 5.391950 CCAAACTCAATCCAATTAGTGTCGG 60.392 44.000 0.00 0.00 0.00 4.79
3464 4617 4.819105 ACTCAATCCAATTAGTGTCGGA 57.181 40.909 0.00 0.00 0.00 4.55
3465 4618 4.504858 ACTCAATCCAATTAGTGTCGGAC 58.495 43.478 0.00 0.00 0.00 4.79
3466 4619 3.869065 TCAATCCAATTAGTGTCGGACC 58.131 45.455 5.55 0.00 0.00 4.46
3467 4620 3.517901 TCAATCCAATTAGTGTCGGACCT 59.482 43.478 5.55 5.14 0.00 3.85
3468 4621 3.543680 ATCCAATTAGTGTCGGACCTG 57.456 47.619 5.55 0.00 0.00 4.00
3469 4622 2.531771 TCCAATTAGTGTCGGACCTGA 58.468 47.619 5.55 0.00 0.00 3.86
3470 4623 3.104512 TCCAATTAGTGTCGGACCTGAT 58.895 45.455 5.55 2.37 0.00 2.90
3471 4624 3.517901 TCCAATTAGTGTCGGACCTGATT 59.482 43.478 5.55 7.96 0.00 2.57
3472 4625 3.623060 CCAATTAGTGTCGGACCTGATTG 59.377 47.826 22.61 22.61 35.55 2.67
3473 4626 4.503910 CAATTAGTGTCGGACCTGATTGA 58.496 43.478 23.88 0.00 37.03 2.57
3474 4627 3.587797 TTAGTGTCGGACCTGATTGAC 57.412 47.619 5.55 0.00 0.00 3.18
3475 4628 0.608640 AGTGTCGGACCTGATTGACC 59.391 55.000 5.55 0.00 0.00 4.02
3476 4629 0.391263 GTGTCGGACCTGATTGACCC 60.391 60.000 5.55 0.00 0.00 4.46
3477 4630 1.153628 GTCGGACCTGATTGACCCG 60.154 63.158 0.00 0.00 41.36 5.28
3478 4631 2.186903 CGGACCTGATTGACCCGG 59.813 66.667 0.00 0.00 36.81 5.73
3479 4632 2.656069 CGGACCTGATTGACCCGGT 61.656 63.158 0.00 0.00 36.81 5.28
3480 4633 1.078426 GGACCTGATTGACCCGGTG 60.078 63.158 0.00 0.00 0.00 4.94
3481 4634 1.677552 GACCTGATTGACCCGGTGT 59.322 57.895 0.00 0.00 0.00 4.16
3482 4635 0.391263 GACCTGATTGACCCGGTGTC 60.391 60.000 14.17 14.17 44.72 3.67
3491 4644 2.919666 GACCCGGTGTCAAATCAATG 57.080 50.000 15.65 0.00 43.85 2.82
3492 4645 1.472480 GACCCGGTGTCAAATCAATGG 59.528 52.381 15.65 0.00 43.85 3.16
3493 4646 0.817013 CCCGGTGTCAAATCAATGGG 59.183 55.000 0.00 0.00 0.00 4.00
3494 4647 1.615651 CCCGGTGTCAAATCAATGGGA 60.616 52.381 0.00 0.00 36.64 4.37
3495 4648 2.378038 CCGGTGTCAAATCAATGGGAT 58.622 47.619 0.00 0.00 38.05 3.85
3496 4649 3.550820 CCGGTGTCAAATCAATGGGATA 58.449 45.455 0.00 0.00 34.28 2.59
3497 4650 3.315191 CCGGTGTCAAATCAATGGGATAC 59.685 47.826 0.00 0.00 34.28 2.24
3498 4651 3.002246 CGGTGTCAAATCAATGGGATACG 59.998 47.826 0.00 0.00 34.28 3.06
3499 4652 3.315191 GGTGTCAAATCAATGGGATACGG 59.685 47.826 0.00 0.00 34.28 4.02
3500 4653 4.196193 GTGTCAAATCAATGGGATACGGA 58.804 43.478 0.00 0.00 34.28 4.69
3501 4654 4.273480 GTGTCAAATCAATGGGATACGGAG 59.727 45.833 0.00 0.00 34.28 4.63
3502 4655 3.251004 GTCAAATCAATGGGATACGGAGC 59.749 47.826 0.00 0.00 34.28 4.70
3503 4656 3.136443 TCAAATCAATGGGATACGGAGCT 59.864 43.478 0.00 0.00 34.28 4.09
3504 4657 3.409026 AATCAATGGGATACGGAGCTC 57.591 47.619 4.71 4.71 34.28 4.09
3505 4658 0.673985 TCAATGGGATACGGAGCTCG 59.326 55.000 7.83 5.83 45.88 5.03
3514 4667 3.494378 CGGAGCTCGTTCGGAGTA 58.506 61.111 7.83 0.00 45.03 2.59
3515 4668 1.062206 CGGAGCTCGTTCGGAGTAC 59.938 63.158 7.83 0.00 45.03 2.73
3516 4669 1.367599 CGGAGCTCGTTCGGAGTACT 61.368 60.000 7.83 0.00 45.03 2.73
3517 4670 0.810016 GGAGCTCGTTCGGAGTACTT 59.190 55.000 7.83 0.00 45.03 2.24
3518 4671 1.201880 GGAGCTCGTTCGGAGTACTTT 59.798 52.381 7.83 0.00 45.03 2.66
3519 4672 2.517935 GAGCTCGTTCGGAGTACTTTC 58.482 52.381 0.00 0.00 45.03 2.62
3520 4673 2.161030 AGCTCGTTCGGAGTACTTTCT 58.839 47.619 0.00 0.00 45.03 2.52
3521 4674 3.341823 AGCTCGTTCGGAGTACTTTCTA 58.658 45.455 0.00 0.00 45.03 2.10
3522 4675 3.126686 AGCTCGTTCGGAGTACTTTCTAC 59.873 47.826 0.00 0.00 45.03 2.59
3523 4676 3.668100 CTCGTTCGGAGTACTTTCTACG 58.332 50.000 0.00 6.06 42.45 3.51
3524 4677 2.159653 TCGTTCGGAGTACTTTCTACGC 60.160 50.000 13.36 0.00 41.06 4.42
3525 4678 2.524034 GTTCGGAGTACTTTCTACGCC 58.476 52.381 0.00 0.00 41.06 5.68
3526 4679 1.098050 TCGGAGTACTTTCTACGCCC 58.902 55.000 0.00 0.00 41.06 6.13
3527 4680 0.101939 CGGAGTACTTTCTACGCCCC 59.898 60.000 0.00 0.00 34.97 5.80
3528 4681 0.101939 GGAGTACTTTCTACGCCCCG 59.898 60.000 0.00 0.00 32.28 5.73
3529 4682 1.098050 GAGTACTTTCTACGCCCCGA 58.902 55.000 0.00 0.00 0.00 5.14
3530 4683 1.680207 GAGTACTTTCTACGCCCCGAT 59.320 52.381 0.00 0.00 0.00 4.18
3531 4684 1.407979 AGTACTTTCTACGCCCCGATG 59.592 52.381 0.00 0.00 0.00 3.84
3532 4685 0.103572 TACTTTCTACGCCCCGATGC 59.896 55.000 0.00 0.00 0.00 3.91
3541 4694 4.320456 CCCCGATGCGGCAGCTAT 62.320 66.667 16.85 1.81 46.86 2.97
3542 4695 2.281070 CCCGATGCGGCAGCTATT 60.281 61.111 16.85 0.00 46.86 1.73
3543 4696 2.320587 CCCGATGCGGCAGCTATTC 61.321 63.158 16.85 3.52 46.86 1.75
3544 4697 1.301244 CCGATGCGGCAGCTATTCT 60.301 57.895 16.85 0.00 45.42 2.40
3545 4698 0.882042 CCGATGCGGCAGCTATTCTT 60.882 55.000 16.85 0.00 45.42 2.52
3546 4699 0.234106 CGATGCGGCAGCTATTCTTG 59.766 55.000 16.85 0.00 45.42 3.02
3547 4700 0.040603 GATGCGGCAGCTATTCTTGC 60.041 55.000 11.57 0.00 45.42 4.01
3548 4701 1.450531 ATGCGGCAGCTATTCTTGCC 61.451 55.000 10.92 5.45 45.42 4.52
3552 4705 0.672342 GGCAGCTATTCTTGCCATGG 59.328 55.000 7.63 7.63 45.99 3.66
3553 4706 0.031721 GCAGCTATTCTTGCCATGGC 59.968 55.000 30.54 30.54 42.35 4.40
3569 4722 2.280797 GCAAGACTGCGTGTGGGA 60.281 61.111 0.00 0.00 39.20 4.37
3570 4723 2.320587 GCAAGACTGCGTGTGGGAG 61.321 63.158 0.00 0.00 39.20 4.30
3571 4724 1.669115 CAAGACTGCGTGTGGGAGG 60.669 63.158 0.00 0.00 38.63 4.30
3572 4725 2.883828 AAGACTGCGTGTGGGAGGG 61.884 63.158 0.00 0.00 38.63 4.30
3573 4726 4.394712 GACTGCGTGTGGGAGGGG 62.395 72.222 0.00 0.00 38.63 4.79
3579 4732 4.489771 GTGTGGGAGGGGCGGATG 62.490 72.222 0.00 0.00 0.00 3.51
3581 4734 4.489771 GTGGGAGGGGCGGATGTG 62.490 72.222 0.00 0.00 0.00 3.21
3583 4736 4.489771 GGGAGGGGCGGATGTGTG 62.490 72.222 0.00 0.00 0.00 3.82
3584 4737 4.489771 GGAGGGGCGGATGTGTGG 62.490 72.222 0.00 0.00 0.00 4.17
3585 4738 4.489771 GAGGGGCGGATGTGTGGG 62.490 72.222 0.00 0.00 0.00 4.61
3588 4741 4.820744 GGGCGGATGTGTGGGCAT 62.821 66.667 0.00 0.00 0.00 4.40
3589 4742 3.520862 GGCGGATGTGTGGGCATG 61.521 66.667 0.00 0.00 0.00 4.06
3590 4743 3.520862 GCGGATGTGTGGGCATGG 61.521 66.667 0.00 0.00 0.00 3.66
3591 4744 2.829914 CGGATGTGTGGGCATGGG 60.830 66.667 0.00 0.00 0.00 4.00
3592 4745 3.149648 GGATGTGTGGGCATGGGC 61.150 66.667 0.00 0.00 40.13 5.36
3593 4746 2.362760 GATGTGTGGGCATGGGCA 60.363 61.111 0.00 0.00 43.71 5.36
3594 4747 1.983481 GATGTGTGGGCATGGGCAA 60.983 57.895 0.00 0.00 43.71 4.52
3595 4748 1.952102 GATGTGTGGGCATGGGCAAG 61.952 60.000 0.00 0.00 43.71 4.01
3596 4749 2.283101 GTGTGGGCATGGGCAAGA 60.283 61.111 0.00 0.00 43.71 3.02
3597 4750 2.036098 TGTGGGCATGGGCAAGAG 59.964 61.111 0.00 0.00 43.71 2.85
3598 4751 2.356278 GTGGGCATGGGCAAGAGA 59.644 61.111 0.00 0.00 43.71 3.10
3599 4752 1.304381 GTGGGCATGGGCAAGAGAA 60.304 57.895 0.00 0.00 43.71 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 9.699410 TTTACCTTCTATCATTGATGGTTGATT 57.301 29.630 11.12 0.00 40.76 2.57
31 32 6.998074 TCTGTTGTCATGTCAAAGATTTACCT 59.002 34.615 6.96 0.00 0.00 3.08
122 123 6.539464 ACACCGTACATTTGTAACAGAAAAGA 59.461 34.615 0.00 0.00 31.52 2.52
170 171 3.680458 TGACACAATAATAGCGCAAACGA 59.320 39.130 11.47 0.00 43.93 3.85
220 221 7.096640 CCAACGACAATGTTTGTAAAATGAGTC 60.097 37.037 0.00 0.00 45.52 3.36
231 232 4.036262 TCCTCTTTCCAACGACAATGTTTG 59.964 41.667 0.00 0.00 0.00 2.93
252 253 3.116531 GGTACGGCGTGCAGTTCC 61.117 66.667 28.25 13.79 0.00 3.62
261 262 0.176219 TCCATAACCTTGGTACGGCG 59.824 55.000 4.80 4.80 38.01 6.46
263 264 4.053295 CGTATTCCATAACCTTGGTACGG 58.947 47.826 0.00 0.00 37.74 4.02
402 422 9.643693 CCCAAGTTTTTACTTCTAACGTAGATA 57.356 33.333 0.00 0.00 34.22 1.98
454 1154 6.016276 TGCCTCTGTTTTTCTCAGGAAAATAC 60.016 38.462 0.00 6.99 46.57 1.89
481 1181 1.529010 GCGGTCGTACATGTCAAATGC 60.529 52.381 0.00 0.00 0.00 3.56
561 1261 4.219033 CGAGTGCACTTCGCTTTTATTTT 58.781 39.130 22.65 0.00 43.06 1.82
630 1363 2.997986 CCAAAATGCTCATTTCACTGGC 59.002 45.455 8.14 0.00 39.88 4.85
639 1372 1.829222 CTCCCAAGCCAAAATGCTCAT 59.171 47.619 0.00 0.00 41.80 2.90
656 1398 4.083862 GTCCCACTCGGCCACTCC 62.084 72.222 2.24 0.00 0.00 3.85
668 1410 2.515057 GTGCAACACACCGTCCCA 60.515 61.111 0.00 0.00 44.02 4.37
791 1548 1.124477 TGATGGGGTGGTTTTTGGCC 61.124 55.000 0.00 0.00 0.00 5.36
923 1688 3.667282 CTGTGCCTGTGCCTGTGC 61.667 66.667 0.00 0.00 36.33 4.57
924 1689 3.667282 GCTGTGCCTGTGCCTGTG 61.667 66.667 0.00 0.00 36.33 3.66
925 1690 4.193893 TGCTGTGCCTGTGCCTGT 62.194 61.111 0.00 0.00 36.33 4.00
926 1691 3.667282 GTGCTGTGCCTGTGCCTG 61.667 66.667 0.00 0.00 36.33 4.85
958 1723 1.270094 TGAAGGTAAGCACTCACACCG 60.270 52.381 0.00 0.00 36.14 4.94
959 1724 2.417719 CTGAAGGTAAGCACTCACACC 58.582 52.381 0.00 0.00 0.00 4.16
985 1754 1.343069 GGCATCTAGGGATCGGAAGT 58.657 55.000 0.00 0.00 0.00 3.01
1110 1879 2.682856 ACATGCATGTACCCGTGAAATC 59.317 45.455 30.50 0.00 39.68 2.17
1111 1880 2.722094 ACATGCATGTACCCGTGAAAT 58.278 42.857 30.50 1.01 39.68 2.17
1112 1881 2.192664 ACATGCATGTACCCGTGAAA 57.807 45.000 30.50 0.00 39.68 2.69
1114 1883 3.336138 TTTACATGCATGTACCCGTGA 57.664 42.857 33.74 18.63 42.48 4.35
1115 1884 3.625313 TCATTTACATGCATGTACCCGTG 59.375 43.478 33.74 26.68 42.48 4.94
1116 1885 3.625764 GTCATTTACATGCATGTACCCGT 59.374 43.478 33.74 19.04 42.48 5.28
1117 1886 3.876914 AGTCATTTACATGCATGTACCCG 59.123 43.478 33.74 24.30 42.48 5.28
1118 1887 4.275936 GGAGTCATTTACATGCATGTACCC 59.724 45.833 33.74 23.02 42.48 3.69
1121 1890 5.822519 GGAAGGAGTCATTTACATGCATGTA 59.177 40.000 31.03 31.03 41.97 2.29
1122 1891 4.641989 GGAAGGAGTCATTTACATGCATGT 59.358 41.667 33.20 33.20 44.48 3.21
1123 1892 4.037208 GGGAAGGAGTCATTTACATGCATG 59.963 45.833 25.09 25.09 0.00 4.06
1124 1893 4.210331 GGGAAGGAGTCATTTACATGCAT 58.790 43.478 0.00 0.00 0.00 3.96
1125 1894 3.620488 GGGAAGGAGTCATTTACATGCA 58.380 45.455 0.00 0.00 0.00 3.96
1126 1895 2.614057 CGGGAAGGAGTCATTTACATGC 59.386 50.000 0.00 0.00 0.00 4.06
1134 1903 0.815734 CACGTACGGGAAGGAGTCAT 59.184 55.000 21.06 0.00 0.00 3.06
1140 1909 1.080298 GACACCACGTACGGGAAGG 60.080 63.158 21.47 16.96 0.00 3.46
1149 1918 1.100463 TGCAATGCAAGACACCACGT 61.100 50.000 5.01 0.00 34.76 4.49
1151 1920 1.705256 CATGCAATGCAAGACACCAC 58.295 50.000 13.45 0.00 43.62 4.16
1161 1933 8.372023 CTAGAAGCCTAGAACACATGCAATGC 62.372 46.154 0.00 0.00 45.70 3.56
1173 1945 5.297278 CGAAGTTAGAGCTAGAAGCCTAGAA 59.703 44.000 0.00 0.00 43.77 2.10
1174 1946 4.817464 CGAAGTTAGAGCTAGAAGCCTAGA 59.183 45.833 0.00 0.00 43.77 2.43
1175 1947 4.577283 ACGAAGTTAGAGCTAGAAGCCTAG 59.423 45.833 0.00 0.00 39.59 3.02
1176 1948 4.525024 ACGAAGTTAGAGCTAGAAGCCTA 58.475 43.478 0.00 0.00 39.59 3.93
1177 1949 3.358118 ACGAAGTTAGAGCTAGAAGCCT 58.642 45.455 0.00 0.00 39.59 4.58
1178 1950 3.786516 ACGAAGTTAGAGCTAGAAGCC 57.213 47.619 0.00 0.00 39.59 4.35
1196 1968 5.118510 GGTATTTTGATCAGTTTGGCAAACG 59.881 40.000 30.94 25.48 45.88 3.60
1250 2065 3.284617 TCTTACACTTCGGATCCATCGA 58.715 45.455 13.41 0.00 34.62 3.59
1259 2074 4.201871 TGTGCAAACTTTCTTACACTTCGG 60.202 41.667 0.00 0.00 0.00 4.30
1265 2080 6.598525 CGACATATGTGCAAACTTTCTTACA 58.401 36.000 14.43 0.00 0.00 2.41
1267 2082 5.627172 GCGACATATGTGCAAACTTTCTTA 58.373 37.500 14.43 0.00 0.00 2.10
1290 2110 2.917971 GACGAGTCATTTTGAGAGGACG 59.082 50.000 0.00 0.00 35.49 4.79
1329 2149 0.665298 GGCGGGATCTTCTGCATTTC 59.335 55.000 5.32 0.00 40.61 2.17
1765 2600 3.135225 CACGTACCATTTGACTTGTCCA 58.865 45.455 0.00 0.00 0.00 4.02
1810 2645 8.986477 AAAAACAAATCTGAATGCTATGTACC 57.014 30.769 0.00 0.00 0.00 3.34
1856 2694 2.030893 ACATGCATTGTGTTGAACGGAG 60.031 45.455 0.00 0.00 37.11 4.63
1903 2741 1.453669 GCCTTCATAGGGCTGGGAG 59.546 63.158 0.00 0.00 45.57 4.30
2279 3124 1.933853 GTCACATACGGTCAGGCATTC 59.066 52.381 0.00 0.00 0.00 2.67
2298 3143 2.430244 GGACACATCGACACGCGT 60.430 61.111 5.58 5.58 41.80 6.01
2299 3144 3.532792 CGGACACATCGACACGCG 61.533 66.667 3.53 3.53 42.69 6.01
2300 3145 3.838795 GCGGACACATCGACACGC 61.839 66.667 0.00 0.00 40.19 5.34
2301 3146 2.126463 AGCGGACACATCGACACG 60.126 61.111 0.00 0.00 0.00 4.49
2302 3147 2.152699 CGAGCGGACACATCGACAC 61.153 63.158 0.00 0.00 38.72 3.67
2303 3148 2.178273 CGAGCGGACACATCGACA 59.822 61.111 0.00 0.00 38.72 4.35
2304 3149 2.152699 CACGAGCGGACACATCGAC 61.153 63.158 0.30 0.00 39.66 4.20
2305 3150 2.178273 CACGAGCGGACACATCGA 59.822 61.111 0.30 0.00 39.66 3.59
2306 3151 3.545481 GCACGAGCGGACACATCG 61.545 66.667 0.00 0.00 42.04 3.84
2317 3162 2.356313 AACCTCTGCACGCACGAG 60.356 61.111 0.00 9.95 0.00 4.18
2318 3163 2.355837 GAACCTCTGCACGCACGA 60.356 61.111 0.00 0.00 0.00 4.35
2319 3164 3.414700 GGAACCTCTGCACGCACG 61.415 66.667 0.00 0.00 0.00 5.34
2362 3207 4.772231 TCCGTCTTCTCCCGGGGG 62.772 72.222 23.50 20.43 44.32 5.40
2546 3391 1.705997 GGCTCCACCACCCGGAATAT 61.706 60.000 0.73 0.00 38.86 1.28
2548 3393 3.728373 GGCTCCACCACCCGGAAT 61.728 66.667 0.73 0.00 38.86 3.01
2618 3463 1.401530 CAATGCGCGCCAGATAATTG 58.598 50.000 30.77 24.60 0.00 2.32
2624 3469 2.896854 GATCCAATGCGCGCCAGA 60.897 61.111 30.77 19.60 0.00 3.86
2716 3561 8.030106 GCTAGCTAGTACTATTTCCAGTATTGG 58.970 40.741 21.62 0.00 46.49 3.16
2717 3562 8.577296 TGCTAGCTAGTACTATTTCCAGTATTG 58.423 37.037 21.62 0.00 33.71 1.90
2718 3563 8.578151 GTGCTAGCTAGTACTATTTCCAGTATT 58.422 37.037 28.52 0.00 36.23 1.89
2719 3564 7.177041 GGTGCTAGCTAGTACTATTTCCAGTAT 59.823 40.741 32.28 0.00 38.70 2.12
2726 3571 3.890147 AGCGGTGCTAGCTAGTACTATTT 59.110 43.478 32.28 17.76 44.05 1.40
2734 3579 0.038709 GATCCAGCGGTGCTAGCTAG 60.039 60.000 16.84 16.84 44.06 3.42
2797 3644 2.289820 GAGAAAACACTTCCAACGGTCC 59.710 50.000 0.00 0.00 0.00 4.46
2804 3651 4.159506 CCAAACAAGGAGAAAACACTTCCA 59.840 41.667 0.00 0.00 0.00 3.53
2856 3703 6.295249 TGTCCACATGAAGATTACACAGAAA 58.705 36.000 0.00 0.00 0.00 2.52
2976 3823 2.319841 CGTACAGCAGCAGCAGCAA 61.320 57.895 12.92 0.00 45.49 3.91
3026 3876 6.607600 GGTAAAGAAAGGAATAGCCCAATCTT 59.392 38.462 0.00 0.00 35.96 2.40
3062 3912 1.611556 GGGGTTGGTAGGGACGACT 60.612 63.158 0.00 0.00 33.44 4.18
3133 3983 1.256812 CCCGCTCCCAATCAACTTTT 58.743 50.000 0.00 0.00 0.00 2.27
3149 3999 2.886730 AAACATTCCTAGCCGCCCCG 62.887 60.000 0.00 0.00 0.00 5.73
3150 4000 1.076995 AAACATTCCTAGCCGCCCC 60.077 57.895 0.00 0.00 0.00 5.80
3183 4336 2.625790 GCCACAAACACCATTAGACCAA 59.374 45.455 0.00 0.00 0.00 3.67
3184 4337 2.235016 GCCACAAACACCATTAGACCA 58.765 47.619 0.00 0.00 0.00 4.02
3192 4345 0.529833 CACAAGTGCCACAAACACCA 59.470 50.000 0.00 0.00 38.87 4.17
3193 4346 0.179113 CCACAAGTGCCACAAACACC 60.179 55.000 0.00 0.00 38.87 4.16
3194 4347 0.179113 CCCACAAGTGCCACAAACAC 60.179 55.000 0.00 0.00 38.35 3.32
3195 4348 1.326213 CCCCACAAGTGCCACAAACA 61.326 55.000 0.00 0.00 0.00 2.83
3196 4349 1.441311 CCCCACAAGTGCCACAAAC 59.559 57.895 0.00 0.00 0.00 2.93
3197 4350 1.760086 CCCCCACAAGTGCCACAAA 60.760 57.895 0.00 0.00 0.00 2.83
3198 4351 2.123511 CCCCCACAAGTGCCACAA 60.124 61.111 0.00 0.00 0.00 3.33
3199 4352 4.912395 GCCCCCACAAGTGCCACA 62.912 66.667 0.00 0.00 0.00 4.17
3200 4353 2.779742 TATGCCCCCACAAGTGCCAC 62.780 60.000 0.00 0.00 0.00 5.01
3201 4354 2.542851 TATGCCCCCACAAGTGCCA 61.543 57.895 0.00 0.00 0.00 4.92
3202 4355 2.052104 GTATGCCCCCACAAGTGCC 61.052 63.158 0.00 0.00 0.00 5.01
3203 4356 2.406616 CGTATGCCCCCACAAGTGC 61.407 63.158 0.00 0.00 0.00 4.40
3204 4357 0.322098 TTCGTATGCCCCCACAAGTG 60.322 55.000 0.00 0.00 0.00 3.16
3205 4358 0.322187 GTTCGTATGCCCCCACAAGT 60.322 55.000 0.00 0.00 0.00 3.16
3206 4359 1.366111 CGTTCGTATGCCCCCACAAG 61.366 60.000 0.00 0.00 0.00 3.16
3207 4360 1.376166 CGTTCGTATGCCCCCACAA 60.376 57.895 0.00 0.00 0.00 3.33
3208 4361 2.266372 CGTTCGTATGCCCCCACA 59.734 61.111 0.00 0.00 0.00 4.17
3209 4362 3.199891 GCGTTCGTATGCCCCCAC 61.200 66.667 0.00 0.00 0.00 4.61
3215 4368 2.327940 GCCATGGCGTTCGTATGC 59.672 61.111 23.48 0.00 35.47 3.14
3216 4369 2.881266 CGGCCATGGCGTTCGTATG 61.881 63.158 29.90 8.34 46.33 2.39
3217 4370 2.587753 CGGCCATGGCGTTCGTAT 60.588 61.111 29.90 0.00 46.33 3.06
3225 4378 3.530260 CCCATCAACGGCCATGGC 61.530 66.667 29.47 29.47 38.67 4.40
3226 4379 0.110295 TATCCCATCAACGGCCATGG 59.890 55.000 7.63 7.63 39.58 3.66
3227 4380 1.527034 CTATCCCATCAACGGCCATG 58.473 55.000 2.24 0.32 0.00 3.66
3228 4381 0.250901 GCTATCCCATCAACGGCCAT 60.251 55.000 2.24 0.00 0.00 4.40
3229 4382 1.148273 GCTATCCCATCAACGGCCA 59.852 57.895 2.24 0.00 0.00 5.36
3230 4383 0.886490 CTGCTATCCCATCAACGGCC 60.886 60.000 0.00 0.00 0.00 6.13
3231 4384 0.179045 ACTGCTATCCCATCAACGGC 60.179 55.000 0.00 0.00 0.00 5.68
3232 4385 3.589988 GATACTGCTATCCCATCAACGG 58.410 50.000 0.00 0.00 0.00 4.44
3233 4386 3.245797 CGATACTGCTATCCCATCAACG 58.754 50.000 0.00 0.00 0.00 4.10
3234 4387 4.258702 ACGATACTGCTATCCCATCAAC 57.741 45.455 0.00 0.00 0.00 3.18
3235 4388 4.631131 CAACGATACTGCTATCCCATCAA 58.369 43.478 0.00 0.00 0.00 2.57
3236 4389 3.554960 GCAACGATACTGCTATCCCATCA 60.555 47.826 0.00 0.00 36.84 3.07
3237 4390 2.996621 GCAACGATACTGCTATCCCATC 59.003 50.000 0.00 0.00 36.84 3.51
3238 4391 2.368548 TGCAACGATACTGCTATCCCAT 59.631 45.455 0.00 0.00 40.59 4.00
3239 4392 1.760029 TGCAACGATACTGCTATCCCA 59.240 47.619 0.00 0.00 40.59 4.37
3240 4393 2.408050 CTGCAACGATACTGCTATCCC 58.592 52.381 0.00 0.00 40.59 3.85
3241 4394 2.035961 TCCTGCAACGATACTGCTATCC 59.964 50.000 0.00 0.00 40.59 2.59
3242 4395 3.312828 CTCCTGCAACGATACTGCTATC 58.687 50.000 0.00 0.00 40.59 2.08
3243 4396 2.036475 CCTCCTGCAACGATACTGCTAT 59.964 50.000 0.00 0.00 40.59 2.97
3244 4397 1.409064 CCTCCTGCAACGATACTGCTA 59.591 52.381 0.00 0.00 40.59 3.49
3245 4398 0.176680 CCTCCTGCAACGATACTGCT 59.823 55.000 0.00 0.00 40.59 4.24
3246 4399 0.108138 ACCTCCTGCAACGATACTGC 60.108 55.000 0.00 0.00 40.35 4.40
3247 4400 1.645034 CACCTCCTGCAACGATACTG 58.355 55.000 0.00 0.00 0.00 2.74
3248 4401 0.108138 GCACCTCCTGCAACGATACT 60.108 55.000 0.00 0.00 46.29 2.12
3249 4402 2.384203 GCACCTCCTGCAACGATAC 58.616 57.895 0.00 0.00 46.29 2.24
3250 4403 4.932789 GCACCTCCTGCAACGATA 57.067 55.556 0.00 0.00 46.29 2.92
3261 4414 2.022195 TCGTACATGGAGTAGCACCTC 58.978 52.381 0.00 0.00 32.19 3.85
3262 4415 2.139323 TCGTACATGGAGTAGCACCT 57.861 50.000 0.00 0.00 32.19 4.00
3263 4416 2.481449 CCTTCGTACATGGAGTAGCACC 60.481 54.545 0.00 0.00 32.19 5.01
3264 4417 2.481449 CCCTTCGTACATGGAGTAGCAC 60.481 54.545 0.00 0.00 32.19 4.40
3265 4418 1.754803 CCCTTCGTACATGGAGTAGCA 59.245 52.381 0.00 0.00 32.19 3.49
3266 4419 2.029623 TCCCTTCGTACATGGAGTAGC 58.970 52.381 0.00 0.00 32.19 3.58
3267 4420 3.992260 CTCCCTTCGTACATGGAGTAG 57.008 52.381 0.00 0.00 39.64 2.57
3270 4423 3.446161 TTGTACTCCCTTCGTACATGGAG 59.554 47.826 12.81 12.81 44.55 3.86
3271 4424 3.090210 TGTACTCCCTTCGTACATGGA 57.910 47.619 0.00 0.00 41.47 3.41
3272 4425 3.880047 TTGTACTCCCTTCGTACATGG 57.120 47.619 0.00 0.00 44.55 3.66
3273 4426 3.617263 GCTTTGTACTCCCTTCGTACATG 59.383 47.826 4.14 0.00 44.55 3.21
3274 4427 3.514309 AGCTTTGTACTCCCTTCGTACAT 59.486 43.478 4.14 0.00 44.55 2.29
3275 4428 2.895404 AGCTTTGTACTCCCTTCGTACA 59.105 45.455 0.00 0.00 43.79 2.90
3276 4429 3.589495 AGCTTTGTACTCCCTTCGTAC 57.411 47.619 0.00 0.00 38.13 3.67
3277 4430 3.306502 CCAAGCTTTGTACTCCCTTCGTA 60.307 47.826 0.00 0.00 0.00 3.43
3278 4431 2.550208 CCAAGCTTTGTACTCCCTTCGT 60.550 50.000 0.00 0.00 0.00 3.85
3279 4432 2.076863 CCAAGCTTTGTACTCCCTTCG 58.923 52.381 0.00 0.00 0.00 3.79
3280 4433 1.813178 GCCAAGCTTTGTACTCCCTTC 59.187 52.381 0.00 0.00 0.00 3.46
3281 4434 1.882352 CGCCAAGCTTTGTACTCCCTT 60.882 52.381 0.00 0.00 0.00 3.95
3282 4435 0.321653 CGCCAAGCTTTGTACTCCCT 60.322 55.000 0.00 0.00 0.00 4.20
3283 4436 1.923227 GCGCCAAGCTTTGTACTCCC 61.923 60.000 0.00 0.00 44.04 4.30
3284 4437 1.502190 GCGCCAAGCTTTGTACTCC 59.498 57.895 0.00 0.00 44.04 3.85
3299 4452 1.873572 GATCAAACCGGCATTGCGC 60.874 57.895 14.17 0.00 41.28 6.09
3300 4453 0.109365 TTGATCAAACCGGCATTGCG 60.109 50.000 5.45 0.00 0.00 4.85
3301 4454 1.632422 CTTGATCAAACCGGCATTGC 58.368 50.000 9.88 0.00 0.00 3.56
3302 4455 1.818060 TCCTTGATCAAACCGGCATTG 59.182 47.619 9.88 13.07 0.00 2.82
3303 4456 2.094675 CTCCTTGATCAAACCGGCATT 58.905 47.619 9.88 0.00 0.00 3.56
3304 4457 1.281867 TCTCCTTGATCAAACCGGCAT 59.718 47.619 9.88 0.00 0.00 4.40
3305 4458 0.690192 TCTCCTTGATCAAACCGGCA 59.310 50.000 9.88 0.00 0.00 5.69
3306 4459 1.066143 TCTCTCCTTGATCAAACCGGC 60.066 52.381 9.88 0.00 0.00 6.13
3307 4460 3.334583 TTCTCTCCTTGATCAAACCGG 57.665 47.619 9.88 7.70 0.00 5.28
3308 4461 6.201806 GTGATATTCTCTCCTTGATCAAACCG 59.798 42.308 9.88 0.00 0.00 4.44
3309 4462 7.050377 TGTGATATTCTCTCCTTGATCAAACC 58.950 38.462 9.88 0.00 0.00 3.27
3310 4463 8.557864 CATGTGATATTCTCTCCTTGATCAAAC 58.442 37.037 9.88 0.62 0.00 2.93
3311 4464 8.488668 TCATGTGATATTCTCTCCTTGATCAAA 58.511 33.333 9.88 0.00 0.00 2.69
3312 4465 8.026396 TCATGTGATATTCTCTCCTTGATCAA 57.974 34.615 8.12 8.12 0.00 2.57
3313 4466 7.607615 TCATGTGATATTCTCTCCTTGATCA 57.392 36.000 0.00 0.00 0.00 2.92
3314 4467 8.899427 TTTCATGTGATATTCTCTCCTTGATC 57.101 34.615 0.00 0.00 0.00 2.92
3315 4468 9.118300 GTTTTCATGTGATATTCTCTCCTTGAT 57.882 33.333 0.00 0.00 0.00 2.57
3316 4469 7.554118 GGTTTTCATGTGATATTCTCTCCTTGA 59.446 37.037 0.00 0.00 0.00 3.02
3317 4470 7.337689 TGGTTTTCATGTGATATTCTCTCCTTG 59.662 37.037 0.00 0.00 0.00 3.61
3318 4471 7.405292 TGGTTTTCATGTGATATTCTCTCCTT 58.595 34.615 0.00 0.00 0.00 3.36
3319 4472 6.962182 TGGTTTTCATGTGATATTCTCTCCT 58.038 36.000 0.00 0.00 0.00 3.69
3320 4473 7.337942 ACTTGGTTTTCATGTGATATTCTCTCC 59.662 37.037 0.00 0.00 33.23 3.71
3321 4474 8.273780 ACTTGGTTTTCATGTGATATTCTCTC 57.726 34.615 0.00 0.00 33.23 3.20
3322 4475 8.641498 AACTTGGTTTTCATGTGATATTCTCT 57.359 30.769 0.00 0.00 34.51 3.10
3323 4476 9.346725 GAAACTTGGTTTTCATGTGATATTCTC 57.653 33.333 0.00 0.00 35.77 2.87
3324 4477 8.023128 CGAAACTTGGTTTTCATGTGATATTCT 58.977 33.333 0.00 0.00 35.77 2.40
3325 4478 7.273381 CCGAAACTTGGTTTTCATGTGATATTC 59.727 37.037 0.00 0.00 35.77 1.75
3326 4479 7.090173 CCGAAACTTGGTTTTCATGTGATATT 58.910 34.615 0.00 0.00 35.77 1.28
3327 4480 6.208599 ACCGAAACTTGGTTTTCATGTGATAT 59.791 34.615 0.00 0.00 35.82 1.63
3328 4481 5.533154 ACCGAAACTTGGTTTTCATGTGATA 59.467 36.000 0.00 0.00 35.82 2.15
3329 4482 4.340950 ACCGAAACTTGGTTTTCATGTGAT 59.659 37.500 0.00 0.00 35.82 3.06
3330 4483 3.697045 ACCGAAACTTGGTTTTCATGTGA 59.303 39.130 0.00 0.00 35.82 3.58
3331 4484 3.796178 CACCGAAACTTGGTTTTCATGTG 59.204 43.478 0.00 0.00 37.72 3.21
3332 4485 3.697045 TCACCGAAACTTGGTTTTCATGT 59.303 39.130 0.00 0.00 37.72 3.21
3333 4486 4.300189 TCACCGAAACTTGGTTTTCATG 57.700 40.909 0.00 0.00 37.72 3.07
3334 4487 4.993029 TTCACCGAAACTTGGTTTTCAT 57.007 36.364 0.00 0.00 37.72 2.57
3335 4488 4.785511 TTTCACCGAAACTTGGTTTTCA 57.214 36.364 0.00 0.00 37.72 2.69
3336 4489 5.051973 CGATTTTCACCGAAACTTGGTTTTC 60.052 40.000 0.00 0.00 37.72 2.29
3337 4490 4.801516 CGATTTTCACCGAAACTTGGTTTT 59.198 37.500 0.00 0.00 37.72 2.43
3338 4491 4.096682 TCGATTTTCACCGAAACTTGGTTT 59.903 37.500 0.00 0.00 37.72 3.27
3339 4492 3.628487 TCGATTTTCACCGAAACTTGGTT 59.372 39.130 0.00 0.00 37.72 3.67
3340 4493 3.002965 GTCGATTTTCACCGAAACTTGGT 59.997 43.478 0.00 0.00 41.47 3.67
3341 4494 3.551551 GTCGATTTTCACCGAAACTTGG 58.448 45.455 0.00 0.00 36.50 3.61
3342 4495 3.060138 TCGTCGATTTTCACCGAAACTTG 60.060 43.478 0.00 0.00 36.50 3.16
3343 4496 3.125316 TCGTCGATTTTCACCGAAACTT 58.875 40.909 0.00 0.00 36.50 2.66
3344 4497 2.746269 TCGTCGATTTTCACCGAAACT 58.254 42.857 0.00 0.00 36.50 2.66
3345 4498 3.508648 TTCGTCGATTTTCACCGAAAC 57.491 42.857 0.00 0.00 36.50 2.78
3346 4499 4.533225 TTTTCGTCGATTTTCACCGAAA 57.467 36.364 11.86 11.86 43.33 3.46
3347 4500 4.735662 ATTTTCGTCGATTTTCACCGAA 57.264 36.364 0.00 1.23 36.50 4.30
3348 4501 4.735662 AATTTTCGTCGATTTTCACCGA 57.264 36.364 0.00 0.00 0.00 4.69
3349 4502 4.486025 CGTAATTTTCGTCGATTTTCACCG 59.514 41.667 0.00 0.00 0.00 4.94
3350 4503 5.279751 CACGTAATTTTCGTCGATTTTCACC 59.720 40.000 0.00 0.00 39.55 4.02
3351 4504 5.279751 CCACGTAATTTTCGTCGATTTTCAC 59.720 40.000 0.00 0.00 39.55 3.18
3352 4505 5.177142 TCCACGTAATTTTCGTCGATTTTCA 59.823 36.000 0.00 0.00 39.55 2.69
3353 4506 5.610975 TCCACGTAATTTTCGTCGATTTTC 58.389 37.500 0.00 0.00 39.55 2.29
3354 4507 5.594724 TCCACGTAATTTTCGTCGATTTT 57.405 34.783 0.00 0.00 39.55 1.82
3355 4508 5.594724 TTCCACGTAATTTTCGTCGATTT 57.405 34.783 0.00 0.00 39.55 2.17
3356 4509 5.376537 GTTTCCACGTAATTTTCGTCGATT 58.623 37.500 0.00 0.00 39.55 3.34
3357 4510 4.433283 CGTTTCCACGTAATTTTCGTCGAT 60.433 41.667 0.00 0.00 41.84 3.59
3358 4511 3.121396 CGTTTCCACGTAATTTTCGTCGA 60.121 43.478 0.00 0.00 41.84 4.20
3359 4512 3.140321 CGTTTCCACGTAATTTTCGTCG 58.860 45.455 0.00 0.00 41.84 5.12
3372 4525 6.929049 TCCATTGATCTATACATCGTTTCCAC 59.071 38.462 0.00 0.00 0.00 4.02
3373 4526 7.061566 TCCATTGATCTATACATCGTTTCCA 57.938 36.000 0.00 0.00 0.00 3.53
3374 4527 9.307121 CTATCCATTGATCTATACATCGTTTCC 57.693 37.037 0.00 0.00 32.18 3.13
3378 4531 8.637099 CCATCTATCCATTGATCTATACATCGT 58.363 37.037 0.00 0.00 32.18 3.73
3379 4532 7.598118 GCCATCTATCCATTGATCTATACATCG 59.402 40.741 0.00 0.00 32.18 3.84
3380 4533 8.427276 TGCCATCTATCCATTGATCTATACATC 58.573 37.037 0.00 0.00 32.18 3.06
3381 4534 8.209584 GTGCCATCTATCCATTGATCTATACAT 58.790 37.037 0.00 0.00 32.18 2.29
3382 4535 7.365028 GGTGCCATCTATCCATTGATCTATACA 60.365 40.741 0.00 0.00 32.18 2.29
3383 4536 6.989169 GGTGCCATCTATCCATTGATCTATAC 59.011 42.308 0.00 0.00 32.18 1.47
3384 4537 6.673537 TGGTGCCATCTATCCATTGATCTATA 59.326 38.462 0.00 0.00 32.18 1.31
3385 4538 5.489997 TGGTGCCATCTATCCATTGATCTAT 59.510 40.000 0.00 0.00 32.18 1.98
3386 4539 4.845796 TGGTGCCATCTATCCATTGATCTA 59.154 41.667 0.00 0.00 32.18 1.98
3387 4540 3.654321 TGGTGCCATCTATCCATTGATCT 59.346 43.478 0.00 0.00 32.18 2.75
3388 4541 4.025040 TGGTGCCATCTATCCATTGATC 57.975 45.455 0.00 0.00 32.18 2.92
3389 4542 4.669866 ATGGTGCCATCTATCCATTGAT 57.330 40.909 0.00 0.00 37.38 2.57
3390 4543 5.627503 CGATATGGTGCCATCTATCCATTGA 60.628 44.000 7.03 0.00 40.54 2.57
3391 4544 4.573607 CGATATGGTGCCATCTATCCATTG 59.426 45.833 7.03 0.00 40.54 2.82
3392 4545 4.471025 TCGATATGGTGCCATCTATCCATT 59.529 41.667 7.03 0.00 40.54 3.16
3393 4546 4.033009 TCGATATGGTGCCATCTATCCAT 58.967 43.478 7.03 0.00 42.38 3.41
3394 4547 3.440127 TCGATATGGTGCCATCTATCCA 58.560 45.455 7.03 0.00 37.82 3.41
3395 4548 4.100035 TCATCGATATGGTGCCATCTATCC 59.900 45.833 7.03 0.00 37.82 2.59
3396 4549 5.268118 TCATCGATATGGTGCCATCTATC 57.732 43.478 7.03 5.58 37.82 2.08
3397 4550 5.682234 TTCATCGATATGGTGCCATCTAT 57.318 39.130 7.03 0.00 37.82 1.98
3398 4551 5.237815 GTTTCATCGATATGGTGCCATCTA 58.762 41.667 7.03 0.00 37.82 1.98
3399 4552 4.067896 GTTTCATCGATATGGTGCCATCT 58.932 43.478 7.03 0.00 37.82 2.90
3400 4553 3.189287 GGTTTCATCGATATGGTGCCATC 59.811 47.826 7.03 0.00 37.82 3.51
3401 4554 3.149196 GGTTTCATCGATATGGTGCCAT 58.851 45.455 8.89 8.89 40.19 4.40
3402 4555 2.571212 GGTTTCATCGATATGGTGCCA 58.429 47.619 0.00 0.00 33.61 4.92
3403 4556 1.531149 CGGTTTCATCGATATGGTGCC 59.469 52.381 0.00 0.00 33.61 5.01
3404 4557 2.479837 TCGGTTTCATCGATATGGTGC 58.520 47.619 0.00 0.00 33.61 5.01
3405 4558 3.433274 CCATCGGTTTCATCGATATGGTG 59.567 47.826 11.41 0.00 44.30 4.17
3406 4559 3.557054 CCCATCGGTTTCATCGATATGGT 60.557 47.826 16.25 0.00 44.30 3.55
3407 4560 3.002791 CCCATCGGTTTCATCGATATGG 58.997 50.000 12.33 12.33 44.30 2.74
3408 4561 3.925379 TCCCATCGGTTTCATCGATATG 58.075 45.455 0.00 0.00 44.30 1.78
3409 4562 3.617531 GCTCCCATCGGTTTCATCGATAT 60.618 47.826 0.00 0.00 44.30 1.63
3410 4563 2.288825 GCTCCCATCGGTTTCATCGATA 60.289 50.000 0.00 0.00 44.30 2.92
3411 4564 1.541233 GCTCCCATCGGTTTCATCGAT 60.541 52.381 0.00 0.00 46.64 3.59
3412 4565 0.179084 GCTCCCATCGGTTTCATCGA 60.179 55.000 0.00 0.00 41.04 3.59
3413 4566 0.179073 AGCTCCCATCGGTTTCATCG 60.179 55.000 0.00 0.00 0.00 3.84
3414 4567 1.139853 AGAGCTCCCATCGGTTTCATC 59.860 52.381 10.93 0.00 0.00 2.92
3415 4568 1.139853 GAGAGCTCCCATCGGTTTCAT 59.860 52.381 10.93 0.00 0.00 2.57
3416 4569 0.537188 GAGAGCTCCCATCGGTTTCA 59.463 55.000 10.93 0.00 0.00 2.69
3417 4570 0.537188 TGAGAGCTCCCATCGGTTTC 59.463 55.000 10.93 0.00 0.00 2.78
3418 4571 0.984230 TTGAGAGCTCCCATCGGTTT 59.016 50.000 10.93 0.00 0.00 3.27
3419 4572 0.539051 CTTGAGAGCTCCCATCGGTT 59.461 55.000 10.93 0.00 0.00 4.44
3420 4573 1.965754 GCTTGAGAGCTCCCATCGGT 61.966 60.000 10.93 0.00 45.65 4.69
3421 4574 1.227497 GCTTGAGAGCTCCCATCGG 60.227 63.158 10.93 0.00 45.65 4.18
3422 4575 4.434685 GCTTGAGAGCTCCCATCG 57.565 61.111 10.93 0.14 45.65 3.84
3431 4584 3.415212 TGGATTGAGTTTGGCTTGAGAG 58.585 45.455 0.00 0.00 0.00 3.20
3432 4585 3.507162 TGGATTGAGTTTGGCTTGAGA 57.493 42.857 0.00 0.00 0.00 3.27
3433 4586 4.796038 ATTGGATTGAGTTTGGCTTGAG 57.204 40.909 0.00 0.00 0.00 3.02
3434 4587 5.774690 ACTAATTGGATTGAGTTTGGCTTGA 59.225 36.000 0.00 0.00 0.00 3.02
3435 4588 5.865552 CACTAATTGGATTGAGTTTGGCTTG 59.134 40.000 0.00 0.00 0.00 4.01
3436 4589 5.539955 ACACTAATTGGATTGAGTTTGGCTT 59.460 36.000 0.00 0.00 0.00 4.35
3437 4590 5.079643 ACACTAATTGGATTGAGTTTGGCT 58.920 37.500 0.00 0.00 0.00 4.75
3438 4591 5.391312 ACACTAATTGGATTGAGTTTGGC 57.609 39.130 0.00 0.00 0.00 4.52
3439 4592 5.391950 CCGACACTAATTGGATTGAGTTTGG 60.392 44.000 0.00 0.00 0.00 3.28
3440 4593 5.411361 TCCGACACTAATTGGATTGAGTTTG 59.589 40.000 0.00 0.00 0.00 2.93
3441 4594 5.411669 GTCCGACACTAATTGGATTGAGTTT 59.588 40.000 0.00 0.00 34.50 2.66
3442 4595 4.935808 GTCCGACACTAATTGGATTGAGTT 59.064 41.667 0.00 0.00 34.50 3.01
3443 4596 4.504858 GTCCGACACTAATTGGATTGAGT 58.495 43.478 0.00 0.00 34.50 3.41
3444 4597 3.871594 GGTCCGACACTAATTGGATTGAG 59.128 47.826 0.00 0.00 34.50 3.02
3445 4598 3.517901 AGGTCCGACACTAATTGGATTGA 59.482 43.478 0.00 0.00 34.50 2.57
3446 4599 3.623060 CAGGTCCGACACTAATTGGATTG 59.377 47.826 0.00 0.00 34.50 2.67
3447 4600 3.517901 TCAGGTCCGACACTAATTGGATT 59.482 43.478 0.00 0.00 34.50 3.01
3448 4601 3.104512 TCAGGTCCGACACTAATTGGAT 58.895 45.455 0.00 0.00 34.50 3.41
3449 4602 2.531771 TCAGGTCCGACACTAATTGGA 58.468 47.619 0.00 0.00 0.00 3.53
3450 4603 3.543680 ATCAGGTCCGACACTAATTGG 57.456 47.619 0.00 0.00 0.00 3.16
3451 4604 4.330074 GTCAATCAGGTCCGACACTAATTG 59.670 45.833 0.00 4.18 0.00 2.32
3452 4605 4.504858 GTCAATCAGGTCCGACACTAATT 58.495 43.478 0.00 0.00 0.00 1.40
3453 4606 3.118738 GGTCAATCAGGTCCGACACTAAT 60.119 47.826 0.00 0.00 0.00 1.73
3454 4607 2.232941 GGTCAATCAGGTCCGACACTAA 59.767 50.000 0.00 0.00 0.00 2.24
3455 4608 1.822990 GGTCAATCAGGTCCGACACTA 59.177 52.381 0.00 0.00 0.00 2.74
3456 4609 0.608640 GGTCAATCAGGTCCGACACT 59.391 55.000 0.00 0.00 0.00 3.55
3457 4610 0.391263 GGGTCAATCAGGTCCGACAC 60.391 60.000 0.00 0.00 0.00 3.67
3458 4611 1.884075 CGGGTCAATCAGGTCCGACA 61.884 60.000 0.00 0.00 42.94 4.35
3459 4612 1.153628 CGGGTCAATCAGGTCCGAC 60.154 63.158 0.00 0.00 42.94 4.79
3460 4613 2.355986 CCGGGTCAATCAGGTCCGA 61.356 63.158 0.00 0.00 42.94 4.55
3461 4614 2.186903 CCGGGTCAATCAGGTCCG 59.813 66.667 0.00 0.00 40.32 4.79
3462 4615 1.078426 CACCGGGTCAATCAGGTCC 60.078 63.158 6.32 0.00 34.25 4.46
3463 4616 0.391263 GACACCGGGTCAATCAGGTC 60.391 60.000 6.32 0.00 46.19 3.85
3464 4617 1.677552 GACACCGGGTCAATCAGGT 59.322 57.895 6.32 0.00 46.19 4.00
3465 4618 4.617875 GACACCGGGTCAATCAGG 57.382 61.111 6.32 0.00 46.19 3.86
3472 4625 7.895476 TATCCCATTGATTTGACACCGGGTC 62.895 48.000 6.32 11.34 39.75 4.46
3473 4626 1.544724 CCATTGATTTGACACCGGGT 58.455 50.000 6.32 0.00 0.00 5.28
3474 4627 0.817013 CCCATTGATTTGACACCGGG 59.183 55.000 6.32 0.00 0.00 5.73
3475 4628 1.832883 TCCCATTGATTTGACACCGG 58.167 50.000 0.00 0.00 0.00 5.28
3476 4629 3.002246 CGTATCCCATTGATTTGACACCG 59.998 47.826 0.00 0.00 34.76 4.94
3477 4630 3.315191 CCGTATCCCATTGATTTGACACC 59.685 47.826 0.00 0.00 34.76 4.16
3478 4631 4.196193 TCCGTATCCCATTGATTTGACAC 58.804 43.478 0.00 0.00 34.76 3.67
3479 4632 4.450976 CTCCGTATCCCATTGATTTGACA 58.549 43.478 0.00 0.00 34.76 3.58
3480 4633 3.251004 GCTCCGTATCCCATTGATTTGAC 59.749 47.826 0.00 0.00 34.76 3.18
3481 4634 3.136443 AGCTCCGTATCCCATTGATTTGA 59.864 43.478 0.00 0.00 34.76 2.69
3482 4635 3.480470 AGCTCCGTATCCCATTGATTTG 58.520 45.455 0.00 0.00 34.76 2.32
3483 4636 3.744660 GAGCTCCGTATCCCATTGATTT 58.255 45.455 0.87 0.00 34.76 2.17
3484 4637 2.289072 CGAGCTCCGTATCCCATTGATT 60.289 50.000 8.47 0.00 34.76 2.57
3485 4638 1.273606 CGAGCTCCGTATCCCATTGAT 59.726 52.381 8.47 0.00 37.49 2.57
3486 4639 0.673985 CGAGCTCCGTATCCCATTGA 59.326 55.000 8.47 0.00 0.00 2.57
3487 4640 3.201342 CGAGCTCCGTATCCCATTG 57.799 57.895 8.47 0.00 0.00 2.82
3497 4650 1.062206 GTACTCCGAACGAGCTCCG 59.938 63.158 8.47 5.99 43.01 4.63
3498 4651 0.810016 AAGTACTCCGAACGAGCTCC 59.190 55.000 8.47 0.00 43.01 4.70
3499 4652 2.162008 AGAAAGTACTCCGAACGAGCTC 59.838 50.000 2.73 2.73 43.01 4.09
3500 4653 2.161030 AGAAAGTACTCCGAACGAGCT 58.839 47.619 0.00 0.00 43.01 4.09
3501 4654 2.633199 AGAAAGTACTCCGAACGAGC 57.367 50.000 0.00 0.00 43.01 5.03
3502 4655 3.668100 CGTAGAAAGTACTCCGAACGAG 58.332 50.000 12.72 0.00 44.95 4.18
3503 4656 2.159653 GCGTAGAAAGTACTCCGAACGA 60.160 50.000 19.00 0.00 0.00 3.85
3504 4657 2.172365 GCGTAGAAAGTACTCCGAACG 58.828 52.381 13.38 13.38 0.00 3.95
3505 4658 2.524034 GGCGTAGAAAGTACTCCGAAC 58.476 52.381 0.00 0.00 0.00 3.95
3506 4659 1.474077 GGGCGTAGAAAGTACTCCGAA 59.526 52.381 0.00 0.00 0.00 4.30
3507 4660 1.098050 GGGCGTAGAAAGTACTCCGA 58.902 55.000 0.00 0.00 0.00 4.55
3508 4661 0.101939 GGGGCGTAGAAAGTACTCCG 59.898 60.000 0.00 0.00 0.00 4.63
3509 4662 0.101939 CGGGGCGTAGAAAGTACTCC 59.898 60.000 0.00 0.00 0.00 3.85
3510 4663 1.098050 TCGGGGCGTAGAAAGTACTC 58.902 55.000 0.00 0.00 0.00 2.59
3511 4664 1.407979 CATCGGGGCGTAGAAAGTACT 59.592 52.381 0.00 0.00 0.00 2.73
3512 4665 1.849097 CATCGGGGCGTAGAAAGTAC 58.151 55.000 0.00 0.00 0.00 2.73
3513 4666 0.103572 GCATCGGGGCGTAGAAAGTA 59.896 55.000 0.00 0.00 0.00 2.24
3514 4667 1.153429 GCATCGGGGCGTAGAAAGT 60.153 57.895 0.00 0.00 0.00 2.66
3515 4668 3.719214 GCATCGGGGCGTAGAAAG 58.281 61.111 0.00 0.00 0.00 2.62
3527 4680 0.234106 CAAGAATAGCTGCCGCATCG 59.766 55.000 2.05 0.00 39.10 3.84
3528 4681 0.040603 GCAAGAATAGCTGCCGCATC 60.041 55.000 2.05 0.00 39.10 3.91
3529 4682 1.450531 GGCAAGAATAGCTGCCGCAT 61.451 55.000 2.05 0.00 37.71 4.73
3530 4683 2.114670 GGCAAGAATAGCTGCCGCA 61.115 57.895 2.05 0.00 37.71 5.69
3531 4684 2.718107 GGCAAGAATAGCTGCCGC 59.282 61.111 0.00 0.00 37.71 6.53
3533 4686 0.672342 CCATGGCAAGAATAGCTGCC 59.328 55.000 0.00 6.13 46.82 4.85
3534 4687 0.031721 GCCATGGCAAGAATAGCTGC 59.968 55.000 32.08 0.00 41.49 5.25
3552 4705 2.280797 TCCCACACGCAGTCTTGC 60.281 61.111 0.00 0.00 41.61 4.01
3553 4706 1.669115 CCTCCCACACGCAGTCTTG 60.669 63.158 0.00 0.00 41.61 3.02
3554 4707 2.743718 CCTCCCACACGCAGTCTT 59.256 61.111 0.00 0.00 41.61 3.01
3555 4708 3.314331 CCCTCCCACACGCAGTCT 61.314 66.667 0.00 0.00 41.61 3.24
3556 4709 4.394712 CCCCTCCCACACGCAGTC 62.395 72.222 0.00 0.00 41.61 3.51
3562 4715 4.489771 CATCCGCCCCTCCCACAC 62.490 72.222 0.00 0.00 0.00 3.82
3564 4717 4.489771 CACATCCGCCCCTCCCAC 62.490 72.222 0.00 0.00 0.00 4.61
3566 4719 4.489771 CACACATCCGCCCCTCCC 62.490 72.222 0.00 0.00 0.00 4.30
3567 4720 4.489771 CCACACATCCGCCCCTCC 62.490 72.222 0.00 0.00 0.00 4.30
3568 4721 4.489771 CCCACACATCCGCCCCTC 62.490 72.222 0.00 0.00 0.00 4.30
3571 4724 4.820744 ATGCCCACACATCCGCCC 62.821 66.667 0.00 0.00 0.00 6.13
3572 4725 3.520862 CATGCCCACACATCCGCC 61.521 66.667 0.00 0.00 0.00 6.13
3573 4726 3.520862 CCATGCCCACACATCCGC 61.521 66.667 0.00 0.00 0.00 5.54
3574 4727 2.829914 CCCATGCCCACACATCCG 60.830 66.667 0.00 0.00 0.00 4.18
3575 4728 3.149648 GCCCATGCCCACACATCC 61.150 66.667 0.00 0.00 0.00 3.51
3576 4729 1.952102 CTTGCCCATGCCCACACATC 61.952 60.000 0.00 0.00 36.33 3.06
3577 4730 1.985662 CTTGCCCATGCCCACACAT 60.986 57.895 0.00 0.00 36.33 3.21
3578 4731 2.601067 CTTGCCCATGCCCACACA 60.601 61.111 0.00 0.00 36.33 3.72
3579 4732 2.283101 TCTTGCCCATGCCCACAC 60.283 61.111 0.00 0.00 36.33 3.82
3580 4733 2.036098 CTCTTGCCCATGCCCACA 59.964 61.111 0.00 0.00 36.33 4.17
3581 4734 1.304381 TTCTCTTGCCCATGCCCAC 60.304 57.895 0.00 0.00 36.33 4.61
3582 4735 3.179284 TTCTCTTGCCCATGCCCA 58.821 55.556 0.00 0.00 36.33 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.