Multiple sequence alignment - TraesCS3D01G285500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G285500 chr3D 100.000 5051 0 0 1 5051 394916550 394911500 0.000000e+00 9328.0
1 TraesCS3D01G285500 chr3D 100.000 191 0 0 5324 5514 394911227 394911037 2.440000e-93 353.0
2 TraesCS3D01G285500 chr3B 94.201 3518 143 24 679 4187 514132050 514128585 0.000000e+00 5310.0
3 TraesCS3D01G285500 chr3B 93.525 834 27 11 4184 5016 514128538 514127731 0.000000e+00 1216.0
4 TraesCS3D01G285500 chr3B 94.915 59 2 1 5456 5514 514127134 514127077 2.120000e-14 91.6
5 TraesCS3D01G285500 chr3B 100.000 35 0 0 5017 5051 514127670 514127636 1.280000e-06 65.8
6 TraesCS3D01G285500 chr3A 92.330 3155 144 44 679 3819 514237146 514234076 0.000000e+00 4396.0
7 TraesCS3D01G285500 chr3A 92.308 468 25 6 4184 4642 514233691 514233226 0.000000e+00 654.0
8 TraesCS3D01G285500 chr3A 85.106 517 54 10 1 516 514268651 514268157 1.770000e-139 507.0
9 TraesCS3D01G285500 chr3A 87.861 346 22 8 4681 5016 514233229 514232894 6.700000e-104 388.0
10 TraesCS3D01G285500 chr3A 88.065 310 27 4 3883 4183 514234047 514233739 5.250000e-95 359.0
11 TraesCS3D01G285500 chr3A 87.500 168 9 7 505 667 514237397 514237237 3.390000e-42 183.0
12 TraesCS3D01G285500 chr3A 100.000 31 0 0 3858 3888 514234086 514234056 2.150000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G285500 chr3D 394911037 394916550 5513 True 4840.50 9328 100.00000 1 5514 2 chr3D.!!$R1 5513
1 TraesCS3D01G285500 chr3B 514127077 514132050 4973 True 1670.85 5310 95.66025 679 5514 4 chr3B.!!$R1 4835
2 TraesCS3D01G285500 chr3A 514232894 514237397 4503 True 1006.40 4396 91.34400 505 5016 6 chr3A.!!$R2 4511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
255 256 0.036671 CCCCGGCCCTCGTATTTATC 60.037 60.000 0.00 0.00 37.11 1.75 F
445 446 0.037605 GTAGTGCGTAGTGGTGGCTT 60.038 55.000 0.00 0.00 0.00 4.35 F
449 450 0.107831 TGCGTAGTGGTGGCTTTTCT 59.892 50.000 0.00 0.00 0.00 2.52 F
1551 1640 0.320334 TCTCGATTGGCGCAGTTCAA 60.320 50.000 10.83 4.19 40.61 2.69 F
1762 1851 1.717032 ACTGTCCAGTAGGCACTTGA 58.283 50.000 0.00 0.00 40.43 3.02 F
1765 1854 1.895798 TGTCCAGTAGGCACTTGAGAG 59.104 52.381 0.00 0.00 41.75 3.20 F
1786 1875 3.073062 AGAACAGAAGCATGTTACCCACT 59.927 43.478 0.00 0.00 43.32 4.00 F
1801 1890 3.097614 ACCCACTTATCGTCTAGCAACT 58.902 45.455 0.00 0.00 0.00 3.16 F
1802 1891 3.119101 ACCCACTTATCGTCTAGCAACTG 60.119 47.826 0.00 0.00 0.00 3.16 F
3848 3975 1.410153 AGCTGGAGTGGCAAAAACAAG 59.590 47.619 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1475 1564 0.321564 TTGTGTGCCCAGAGAATCCG 60.322 55.000 0.00 0.00 33.66 4.18 R
1541 1630 0.881118 TTCCCTGAATTGAACTGCGC 59.119 50.000 0.00 0.00 0.00 6.09 R
1588 1677 1.529438 TCTGCAAGTTTAAACGAGCCG 59.471 47.619 25.06 21.05 34.28 5.52 R
2946 3059 1.424638 AAGTACCACCAGACTGCACT 58.575 50.000 0.00 0.00 0.00 4.40 R
3124 3238 2.751166 TCTGCACAGGAAACTAGAGC 57.249 50.000 0.00 0.00 40.21 4.09 R
3627 3752 3.142174 GGACAAGTTTGCAGCTAGAAGT 58.858 45.455 0.00 0.00 0.00 3.01 R
3767 3894 3.093814 TGAAAACATGATGCAGCTCCAT 58.906 40.909 2.53 0.00 0.00 3.41 R
3848 3975 4.202182 GGTGTTAGGACAAAAGGGAAAACC 60.202 45.833 0.00 0.00 37.57 3.27 R
3919 4060 7.074653 TGGAGTTGAAACCTTATAAGACAGT 57.925 36.000 14.28 0.63 0.00 3.55 R
5381 5669 0.955919 CCGTCAACTGGAAGGAAGCC 60.956 60.000 0.00 0.00 46.90 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.783242 CACAACTTCAGTTTTACCGGATG 58.217 43.478 9.46 0.00 35.83 3.51
23 24 3.818773 ACAACTTCAGTTTTACCGGATGG 59.181 43.478 9.46 0.00 37.45 3.51
24 25 2.433436 ACTTCAGTTTTACCGGATGGC 58.567 47.619 9.46 0.00 39.70 4.40
25 26 2.039879 ACTTCAGTTTTACCGGATGGCT 59.960 45.455 9.46 0.00 39.70 4.75
26 27 3.262405 ACTTCAGTTTTACCGGATGGCTA 59.738 43.478 9.46 0.00 39.70 3.93
27 28 4.080526 ACTTCAGTTTTACCGGATGGCTAT 60.081 41.667 9.46 0.00 39.70 2.97
28 29 4.067972 TCAGTTTTACCGGATGGCTATC 57.932 45.455 9.46 0.51 39.70 2.08
29 30 3.709653 TCAGTTTTACCGGATGGCTATCT 59.290 43.478 9.46 0.00 39.70 1.98
30 31 4.163458 TCAGTTTTACCGGATGGCTATCTT 59.837 41.667 9.46 0.00 39.70 2.40
31 32 5.364446 TCAGTTTTACCGGATGGCTATCTTA 59.636 40.000 9.46 0.00 39.70 2.10
32 33 6.042781 TCAGTTTTACCGGATGGCTATCTTAT 59.957 38.462 9.46 0.00 39.70 1.73
33 34 6.369065 CAGTTTTACCGGATGGCTATCTTATC 59.631 42.308 9.46 0.00 39.70 1.75
34 35 6.270231 AGTTTTACCGGATGGCTATCTTATCT 59.730 38.462 9.46 0.00 39.70 1.98
35 36 6.681729 TTTACCGGATGGCTATCTTATCTT 57.318 37.500 9.46 0.00 39.70 2.40
36 37 6.681729 TTACCGGATGGCTATCTTATCTTT 57.318 37.500 9.46 0.00 39.70 2.52
37 38 5.568620 ACCGGATGGCTATCTTATCTTTT 57.431 39.130 9.46 0.00 39.70 2.27
38 39 5.308825 ACCGGATGGCTATCTTATCTTTTG 58.691 41.667 9.46 0.00 39.70 2.44
39 40 4.154918 CCGGATGGCTATCTTATCTTTTGC 59.845 45.833 10.15 0.00 33.68 3.68
40 41 4.999950 CGGATGGCTATCTTATCTTTTGCT 59.000 41.667 10.15 0.00 33.68 3.91
41 42 5.106791 CGGATGGCTATCTTATCTTTTGCTG 60.107 44.000 10.15 0.00 33.68 4.41
42 43 5.767168 GGATGGCTATCTTATCTTTTGCTGT 59.233 40.000 10.15 0.00 33.68 4.40
43 44 6.264067 GGATGGCTATCTTATCTTTTGCTGTT 59.736 38.462 10.15 0.00 33.68 3.16
44 45 6.683974 TGGCTATCTTATCTTTTGCTGTTC 57.316 37.500 0.00 0.00 0.00 3.18
45 46 6.418101 TGGCTATCTTATCTTTTGCTGTTCT 58.582 36.000 0.00 0.00 0.00 3.01
46 47 6.886459 TGGCTATCTTATCTTTTGCTGTTCTT 59.114 34.615 0.00 0.00 0.00 2.52
47 48 7.148188 TGGCTATCTTATCTTTTGCTGTTCTTG 60.148 37.037 0.00 0.00 0.00 3.02
48 49 6.690528 GCTATCTTATCTTTTGCTGTTCTTGC 59.309 38.462 0.00 0.00 0.00 4.01
49 50 5.376854 TCTTATCTTTTGCTGTTCTTGCC 57.623 39.130 0.00 0.00 0.00 4.52
50 51 5.072741 TCTTATCTTTTGCTGTTCTTGCCT 58.927 37.500 0.00 0.00 0.00 4.75
51 52 6.237901 TCTTATCTTTTGCTGTTCTTGCCTA 58.762 36.000 0.00 0.00 0.00 3.93
52 53 4.773323 ATCTTTTGCTGTTCTTGCCTAC 57.227 40.909 0.00 0.00 0.00 3.18
53 54 2.548057 TCTTTTGCTGTTCTTGCCTACG 59.452 45.455 0.00 0.00 0.00 3.51
54 55 1.234821 TTTGCTGTTCTTGCCTACGG 58.765 50.000 0.00 0.00 0.00 4.02
55 56 0.605319 TTGCTGTTCTTGCCTACGGG 60.605 55.000 0.00 0.00 0.00 5.28
56 57 1.003718 GCTGTTCTTGCCTACGGGT 60.004 57.895 0.00 0.00 34.45 5.28
57 58 1.019805 GCTGTTCTTGCCTACGGGTC 61.020 60.000 0.00 0.00 34.45 4.46
58 59 0.391263 CTGTTCTTGCCTACGGGTCC 60.391 60.000 0.00 0.00 34.45 4.46
59 60 1.447314 GTTCTTGCCTACGGGTCCG 60.447 63.158 7.97 7.97 46.03 4.79
60 61 1.607178 TTCTTGCCTACGGGTCCGA 60.607 57.895 16.90 0.00 42.83 4.55
61 62 0.974010 TTCTTGCCTACGGGTCCGAT 60.974 55.000 16.90 3.30 42.83 4.18
62 63 0.974010 TCTTGCCTACGGGTCCGATT 60.974 55.000 16.90 0.00 42.83 3.34
63 64 0.810031 CTTGCCTACGGGTCCGATTG 60.810 60.000 16.90 4.65 42.83 2.67
64 65 2.108362 GCCTACGGGTCCGATTGG 59.892 66.667 16.90 14.25 42.83 3.16
65 66 2.428925 GCCTACGGGTCCGATTGGA 61.429 63.158 16.90 0.00 43.88 3.53
77 78 4.413495 TCCGATTGGAATGTCGTTTTTC 57.587 40.909 0.00 0.00 42.85 2.29
78 79 3.815962 TCCGATTGGAATGTCGTTTTTCA 59.184 39.130 0.00 0.00 42.85 2.69
79 80 4.083537 TCCGATTGGAATGTCGTTTTTCAG 60.084 41.667 0.00 0.00 42.85 3.02
80 81 3.603770 CGATTGGAATGTCGTTTTTCAGC 59.396 43.478 0.00 0.00 33.42 4.26
81 82 4.613622 CGATTGGAATGTCGTTTTTCAGCT 60.614 41.667 0.00 0.00 33.42 4.24
82 83 3.624326 TGGAATGTCGTTTTTCAGCTG 57.376 42.857 7.63 7.63 0.00 4.24
83 84 3.210227 TGGAATGTCGTTTTTCAGCTGA 58.790 40.909 13.74 13.74 0.00 4.26
84 85 3.629855 TGGAATGTCGTTTTTCAGCTGAA 59.370 39.130 25.16 25.16 0.00 3.02
85 86 4.278170 TGGAATGTCGTTTTTCAGCTGAAT 59.722 37.500 28.89 11.41 33.54 2.57
86 87 5.471797 TGGAATGTCGTTTTTCAGCTGAATA 59.528 36.000 28.89 21.59 33.54 1.75
87 88 5.795441 GGAATGTCGTTTTTCAGCTGAATAC 59.205 40.000 28.89 25.21 33.54 1.89
88 89 5.940192 ATGTCGTTTTTCAGCTGAATACA 57.060 34.783 28.89 24.07 33.54 2.29
89 90 5.743026 TGTCGTTTTTCAGCTGAATACAA 57.257 34.783 28.89 17.79 33.54 2.41
90 91 5.507077 TGTCGTTTTTCAGCTGAATACAAC 58.493 37.500 28.89 25.83 33.54 3.32
91 92 4.909880 GTCGTTTTTCAGCTGAATACAACC 59.090 41.667 28.89 12.63 33.54 3.77
92 93 4.576873 TCGTTTTTCAGCTGAATACAACCA 59.423 37.500 28.89 17.08 33.54 3.67
93 94 5.240623 TCGTTTTTCAGCTGAATACAACCAT 59.759 36.000 28.89 0.00 33.54 3.55
94 95 5.569059 CGTTTTTCAGCTGAATACAACCATC 59.431 40.000 28.89 9.89 33.54 3.51
95 96 6.446318 GTTTTTCAGCTGAATACAACCATCA 58.554 36.000 28.89 7.98 33.54 3.07
96 97 6.647334 TTTTCAGCTGAATACAACCATCAA 57.353 33.333 28.89 13.54 33.54 2.57
97 98 6.647334 TTTCAGCTGAATACAACCATCAAA 57.353 33.333 28.89 7.24 33.54 2.69
98 99 6.839124 TTCAGCTGAATACAACCATCAAAT 57.161 33.333 25.16 0.00 0.00 2.32
99 100 7.936496 TTCAGCTGAATACAACCATCAAATA 57.064 32.000 25.16 0.00 0.00 1.40
100 101 8.523915 TTCAGCTGAATACAACCATCAAATAT 57.476 30.769 25.16 0.00 0.00 1.28
101 102 9.625747 TTCAGCTGAATACAACCATCAAATATA 57.374 29.630 25.16 0.00 0.00 0.86
102 103 9.056005 TCAGCTGAATACAACCATCAAATATAC 57.944 33.333 15.67 0.00 0.00 1.47
103 104 8.292448 CAGCTGAATACAACCATCAAATATACC 58.708 37.037 8.42 0.00 0.00 2.73
104 105 7.998383 AGCTGAATACAACCATCAAATATACCA 59.002 33.333 0.00 0.00 0.00 3.25
105 106 8.076178 GCTGAATACAACCATCAAATATACCAC 58.924 37.037 0.00 0.00 0.00 4.16
106 107 9.119418 CTGAATACAACCATCAAATATACCACA 57.881 33.333 0.00 0.00 0.00 4.17
107 108 9.639563 TGAATACAACCATCAAATATACCACAT 57.360 29.630 0.00 0.00 0.00 3.21
111 112 8.450578 ACAACCATCAAATATACCACATACAG 57.549 34.615 0.00 0.00 0.00 2.74
112 113 8.271458 ACAACCATCAAATATACCACATACAGA 58.729 33.333 0.00 0.00 0.00 3.41
113 114 9.119418 CAACCATCAAATATACCACATACAGAA 57.881 33.333 0.00 0.00 0.00 3.02
114 115 9.693739 AACCATCAAATATACCACATACAGAAA 57.306 29.630 0.00 0.00 0.00 2.52
115 116 9.693739 ACCATCAAATATACCACATACAGAAAA 57.306 29.630 0.00 0.00 0.00 2.29
132 133 2.863401 AAAAACCGGCAGACTTCAAC 57.137 45.000 0.00 0.00 0.00 3.18
133 134 2.052782 AAAACCGGCAGACTTCAACT 57.947 45.000 0.00 0.00 0.00 3.16
134 135 1.308998 AAACCGGCAGACTTCAACTG 58.691 50.000 0.00 0.00 38.27 3.16
140 141 2.609825 CAGACTTCAACTGCGTGCT 58.390 52.632 0.00 0.00 0.00 4.40
141 142 0.940126 CAGACTTCAACTGCGTGCTT 59.060 50.000 0.00 0.00 0.00 3.91
142 143 1.070309 CAGACTTCAACTGCGTGCTTC 60.070 52.381 0.00 0.00 0.00 3.86
143 144 0.111089 GACTTCAACTGCGTGCTTCG 60.111 55.000 0.00 0.00 43.12 3.79
144 145 0.529773 ACTTCAACTGCGTGCTTCGA 60.530 50.000 6.11 0.00 42.86 3.71
145 146 0.792640 CTTCAACTGCGTGCTTCGAT 59.207 50.000 6.11 0.00 42.86 3.59
146 147 0.512518 TTCAACTGCGTGCTTCGATG 59.487 50.000 6.11 0.00 42.86 3.84
147 148 0.319469 TCAACTGCGTGCTTCGATGA 60.319 50.000 1.89 0.00 42.86 2.92
148 149 0.723414 CAACTGCGTGCTTCGATGAT 59.277 50.000 1.89 0.00 42.86 2.45
149 150 1.002366 AACTGCGTGCTTCGATGATC 58.998 50.000 1.89 0.00 42.86 2.92
150 151 1.142185 ACTGCGTGCTTCGATGATCG 61.142 55.000 8.83 8.83 42.86 3.69
151 152 1.142185 CTGCGTGCTTCGATGATCGT 61.142 55.000 15.06 0.00 41.35 3.73
152 153 0.735978 TGCGTGCTTCGATGATCGTT 60.736 50.000 15.06 0.00 41.35 3.85
153 154 0.370273 GCGTGCTTCGATGATCGTTT 59.630 50.000 15.06 0.00 41.35 3.60
154 155 1.589968 GCGTGCTTCGATGATCGTTTC 60.590 52.381 15.06 5.52 41.35 2.78
155 156 1.005975 CGTGCTTCGATGATCGTTTCC 60.006 52.381 15.06 3.09 41.35 3.13
156 157 1.005975 GTGCTTCGATGATCGTTTCCG 60.006 52.381 15.06 1.63 41.35 4.30
167 168 1.904144 TCGTTTCCGAGCAGTAATCG 58.096 50.000 0.00 0.00 38.40 3.34
168 169 1.200716 TCGTTTCCGAGCAGTAATCGT 59.799 47.619 0.00 0.00 38.40 3.73
169 170 1.990563 CGTTTCCGAGCAGTAATCGTT 59.009 47.619 0.00 0.00 38.50 3.85
170 171 2.027688 CGTTTCCGAGCAGTAATCGTTC 59.972 50.000 0.00 0.00 38.50 3.95
171 172 2.288961 TTCCGAGCAGTAATCGTTCC 57.711 50.000 0.00 0.00 38.50 3.62
172 173 1.179152 TCCGAGCAGTAATCGTTCCA 58.821 50.000 0.00 0.00 38.50 3.53
173 174 1.135199 TCCGAGCAGTAATCGTTCCAC 60.135 52.381 0.00 0.00 38.50 4.02
174 175 0.914551 CGAGCAGTAATCGTTCCACG 59.085 55.000 0.00 0.00 44.19 4.94
175 176 1.278238 GAGCAGTAATCGTTCCACGG 58.722 55.000 0.00 0.00 42.81 4.94
176 177 0.108329 AGCAGTAATCGTTCCACGGG 60.108 55.000 0.00 0.00 42.81 5.28
177 178 0.390735 GCAGTAATCGTTCCACGGGT 60.391 55.000 0.00 0.00 42.81 5.28
178 179 1.135024 GCAGTAATCGTTCCACGGGTA 60.135 52.381 0.00 0.00 42.81 3.69
179 180 2.482490 GCAGTAATCGTTCCACGGGTAT 60.482 50.000 0.00 0.00 42.81 2.73
180 181 3.378339 CAGTAATCGTTCCACGGGTATC 58.622 50.000 0.00 0.00 42.81 2.24
181 182 2.363359 AGTAATCGTTCCACGGGTATCC 59.637 50.000 0.00 0.00 42.81 2.59
182 183 1.492764 AATCGTTCCACGGGTATCCT 58.507 50.000 0.00 0.00 42.81 3.24
183 184 2.369983 ATCGTTCCACGGGTATCCTA 57.630 50.000 0.00 0.00 42.81 2.94
184 185 1.683943 TCGTTCCACGGGTATCCTAG 58.316 55.000 0.00 0.00 42.81 3.02
185 186 1.212688 TCGTTCCACGGGTATCCTAGA 59.787 52.381 0.00 0.00 42.81 2.43
186 187 2.158564 TCGTTCCACGGGTATCCTAGAT 60.159 50.000 0.00 0.00 42.81 1.98
187 188 2.626743 CGTTCCACGGGTATCCTAGATT 59.373 50.000 0.00 0.00 38.08 2.40
188 189 3.822735 CGTTCCACGGGTATCCTAGATTA 59.177 47.826 0.00 0.00 38.08 1.75
189 190 4.461781 CGTTCCACGGGTATCCTAGATTAT 59.538 45.833 0.00 0.00 38.08 1.28
190 191 5.392811 CGTTCCACGGGTATCCTAGATTATC 60.393 48.000 0.00 0.00 38.08 1.75
191 192 4.607239 TCCACGGGTATCCTAGATTATCC 58.393 47.826 0.00 0.00 0.00 2.59
192 193 4.294168 TCCACGGGTATCCTAGATTATCCT 59.706 45.833 0.00 0.00 0.00 3.24
193 194 5.024118 CCACGGGTATCCTAGATTATCCTT 58.976 45.833 0.00 0.00 0.00 3.36
194 195 5.105310 CCACGGGTATCCTAGATTATCCTTG 60.105 48.000 0.00 0.00 0.00 3.61
195 196 5.480772 CACGGGTATCCTAGATTATCCTTGT 59.519 44.000 0.00 0.00 0.00 3.16
196 197 6.662234 CACGGGTATCCTAGATTATCCTTGTA 59.338 42.308 0.00 0.00 0.00 2.41
197 198 7.342284 CACGGGTATCCTAGATTATCCTTGTAT 59.658 40.741 0.00 0.00 0.00 2.29
198 199 7.560626 ACGGGTATCCTAGATTATCCTTGTATC 59.439 40.741 0.00 0.00 0.00 2.24
199 200 7.014422 CGGGTATCCTAGATTATCCTTGTATCC 59.986 44.444 0.00 0.00 0.00 2.59
200 201 7.844779 GGGTATCCTAGATTATCCTTGTATCCA 59.155 40.741 0.00 0.00 0.00 3.41
201 202 9.268282 GGTATCCTAGATTATCCTTGTATCCAA 57.732 37.037 0.00 0.00 0.00 3.53
203 204 7.554959 TCCTAGATTATCCTTGTATCCAACC 57.445 40.000 0.00 0.00 0.00 3.77
204 205 7.313731 TCCTAGATTATCCTTGTATCCAACCT 58.686 38.462 0.00 0.00 0.00 3.50
205 206 7.235606 TCCTAGATTATCCTTGTATCCAACCTG 59.764 40.741 0.00 0.00 0.00 4.00
206 207 6.831664 AGATTATCCTTGTATCCAACCTGT 57.168 37.500 0.00 0.00 0.00 4.00
207 208 7.931015 AGATTATCCTTGTATCCAACCTGTA 57.069 36.000 0.00 0.00 0.00 2.74
208 209 8.331931 AGATTATCCTTGTATCCAACCTGTAA 57.668 34.615 0.00 0.00 0.00 2.41
209 210 8.778059 AGATTATCCTTGTATCCAACCTGTAAA 58.222 33.333 0.00 0.00 0.00 2.01
210 211 8.747538 ATTATCCTTGTATCCAACCTGTAAAC 57.252 34.615 0.00 0.00 0.00 2.01
211 212 5.570205 TCCTTGTATCCAACCTGTAAACA 57.430 39.130 0.00 0.00 0.00 2.83
212 213 5.942961 TCCTTGTATCCAACCTGTAAACAA 58.057 37.500 0.00 0.00 0.00 2.83
213 214 6.366340 TCCTTGTATCCAACCTGTAAACAAA 58.634 36.000 0.00 0.00 0.00 2.83
214 215 6.834451 TCCTTGTATCCAACCTGTAAACAAAA 59.166 34.615 0.00 0.00 0.00 2.44
215 216 7.507616 TCCTTGTATCCAACCTGTAAACAAAAT 59.492 33.333 0.00 0.00 0.00 1.82
216 217 7.598493 CCTTGTATCCAACCTGTAAACAAAATG 59.402 37.037 0.00 0.00 0.00 2.32
217 218 6.451393 TGTATCCAACCTGTAAACAAAATGC 58.549 36.000 0.00 0.00 0.00 3.56
218 219 4.329462 TCCAACCTGTAAACAAAATGCC 57.671 40.909 0.00 0.00 0.00 4.40
219 220 3.964031 TCCAACCTGTAAACAAAATGCCT 59.036 39.130 0.00 0.00 0.00 4.75
220 221 4.038642 TCCAACCTGTAAACAAAATGCCTC 59.961 41.667 0.00 0.00 0.00 4.70
221 222 4.202202 CCAACCTGTAAACAAAATGCCTCA 60.202 41.667 0.00 0.00 0.00 3.86
222 223 4.584327 ACCTGTAAACAAAATGCCTCAC 57.416 40.909 0.00 0.00 0.00 3.51
223 224 3.320826 ACCTGTAAACAAAATGCCTCACC 59.679 43.478 0.00 0.00 0.00 4.02
224 225 3.573967 CCTGTAAACAAAATGCCTCACCT 59.426 43.478 0.00 0.00 0.00 4.00
225 226 4.764823 CCTGTAAACAAAATGCCTCACCTA 59.235 41.667 0.00 0.00 0.00 3.08
226 227 5.418840 CCTGTAAACAAAATGCCTCACCTAT 59.581 40.000 0.00 0.00 0.00 2.57
227 228 6.266168 TGTAAACAAAATGCCTCACCTATG 57.734 37.500 0.00 0.00 0.00 2.23
228 229 6.007076 TGTAAACAAAATGCCTCACCTATGA 58.993 36.000 0.00 0.00 0.00 2.15
229 230 5.391312 AAACAAAATGCCTCACCTATGAC 57.609 39.130 0.00 0.00 0.00 3.06
230 231 3.356290 ACAAAATGCCTCACCTATGACC 58.644 45.455 0.00 0.00 0.00 4.02
231 232 2.332063 AAATGCCTCACCTATGACCG 57.668 50.000 0.00 0.00 0.00 4.79
232 233 0.469917 AATGCCTCACCTATGACCGG 59.530 55.000 0.00 0.00 0.00 5.28
233 234 0.691078 ATGCCTCACCTATGACCGGT 60.691 55.000 6.92 6.92 34.38 5.28
234 235 0.907704 TGCCTCACCTATGACCGGTT 60.908 55.000 9.42 0.00 30.82 4.44
235 236 0.252197 GCCTCACCTATGACCGGTTT 59.748 55.000 9.42 1.66 30.82 3.27
236 237 1.742750 GCCTCACCTATGACCGGTTTC 60.743 57.143 9.42 0.00 30.82 2.78
237 238 1.134491 CCTCACCTATGACCGGTTTCC 60.134 57.143 9.42 0.00 30.82 3.13
238 239 0.906775 TCACCTATGACCGGTTTCCC 59.093 55.000 9.42 0.00 30.82 3.97
239 240 0.107361 CACCTATGACCGGTTTCCCC 60.107 60.000 9.42 0.00 30.82 4.81
249 250 3.393106 GTTTCCCCGGCCCTCGTA 61.393 66.667 0.00 0.00 37.11 3.43
250 251 2.365901 TTTCCCCGGCCCTCGTAT 60.366 61.111 0.00 0.00 37.11 3.06
251 252 1.996748 TTTCCCCGGCCCTCGTATT 60.997 57.895 0.00 0.00 37.11 1.89
252 253 1.564483 TTTCCCCGGCCCTCGTATTT 61.564 55.000 0.00 0.00 37.11 1.40
253 254 0.690411 TTCCCCGGCCCTCGTATTTA 60.690 55.000 0.00 0.00 37.11 1.40
254 255 0.472352 TCCCCGGCCCTCGTATTTAT 60.472 55.000 0.00 0.00 37.11 1.40
255 256 0.036671 CCCCGGCCCTCGTATTTATC 60.037 60.000 0.00 0.00 37.11 1.75
256 257 0.974383 CCCGGCCCTCGTATTTATCT 59.026 55.000 0.00 0.00 37.11 1.98
257 258 1.067071 CCCGGCCCTCGTATTTATCTC 60.067 57.143 0.00 0.00 37.11 2.75
258 259 1.893801 CCGGCCCTCGTATTTATCTCT 59.106 52.381 0.00 0.00 37.11 3.10
259 260 2.094649 CCGGCCCTCGTATTTATCTCTC 60.095 54.545 0.00 0.00 37.11 3.20
260 261 2.094649 CGGCCCTCGTATTTATCTCTCC 60.095 54.545 0.00 0.00 0.00 3.71
261 262 2.897969 GGCCCTCGTATTTATCTCTCCA 59.102 50.000 0.00 0.00 0.00 3.86
262 263 3.515901 GGCCCTCGTATTTATCTCTCCAT 59.484 47.826 0.00 0.00 0.00 3.41
263 264 4.382147 GGCCCTCGTATTTATCTCTCCATC 60.382 50.000 0.00 0.00 0.00 3.51
264 265 4.220821 GCCCTCGTATTTATCTCTCCATCA 59.779 45.833 0.00 0.00 0.00 3.07
265 266 5.623368 GCCCTCGTATTTATCTCTCCATCAG 60.623 48.000 0.00 0.00 0.00 2.90
266 267 5.712446 CCCTCGTATTTATCTCTCCATCAGA 59.288 44.000 0.00 0.00 0.00 3.27
267 268 6.209589 CCCTCGTATTTATCTCTCCATCAGAA 59.790 42.308 0.00 0.00 0.00 3.02
268 269 7.255977 CCCTCGTATTTATCTCTCCATCAGAAA 60.256 40.741 0.00 0.00 0.00 2.52
269 270 8.310382 CCTCGTATTTATCTCTCCATCAGAAAT 58.690 37.037 0.00 0.00 0.00 2.17
270 271 9.703892 CTCGTATTTATCTCTCCATCAGAAATT 57.296 33.333 0.00 0.00 0.00 1.82
276 277 6.770746 ATCTCTCCATCAGAAATTTGTTGG 57.229 37.500 0.00 0.00 38.65 3.77
277 278 5.879763 TCTCTCCATCAGAAATTTGTTGGA 58.120 37.500 8.13 8.13 42.04 3.53
280 281 3.511146 TCCATCAGAAATTTGTTGGAGGC 59.489 43.478 4.96 0.00 40.36 4.70
281 282 3.258872 CCATCAGAAATTTGTTGGAGGCA 59.741 43.478 0.00 0.00 39.31 4.75
282 283 4.491676 CATCAGAAATTTGTTGGAGGCAG 58.508 43.478 0.00 0.00 0.00 4.85
283 284 2.892852 TCAGAAATTTGTTGGAGGCAGG 59.107 45.455 0.00 0.00 0.00 4.85
284 285 2.629617 CAGAAATTTGTTGGAGGCAGGT 59.370 45.455 0.00 0.00 0.00 4.00
285 286 3.826157 CAGAAATTTGTTGGAGGCAGGTA 59.174 43.478 0.00 0.00 0.00 3.08
286 287 4.280677 CAGAAATTTGTTGGAGGCAGGTAA 59.719 41.667 0.00 0.00 0.00 2.85
287 288 5.047092 CAGAAATTTGTTGGAGGCAGGTAAT 60.047 40.000 0.00 0.00 0.00 1.89
288 289 6.152661 CAGAAATTTGTTGGAGGCAGGTAATA 59.847 38.462 0.00 0.00 0.00 0.98
289 290 6.897413 AGAAATTTGTTGGAGGCAGGTAATAT 59.103 34.615 0.00 0.00 0.00 1.28
290 291 8.058847 AGAAATTTGTTGGAGGCAGGTAATATA 58.941 33.333 0.00 0.00 0.00 0.86
291 292 7.582667 AATTTGTTGGAGGCAGGTAATATAC 57.417 36.000 0.00 0.00 0.00 1.47
292 293 5.702065 TTGTTGGAGGCAGGTAATATACA 57.298 39.130 0.00 0.00 0.00 2.29
293 294 5.702065 TGTTGGAGGCAGGTAATATACAA 57.298 39.130 0.00 0.00 0.00 2.41
294 295 6.260700 TGTTGGAGGCAGGTAATATACAAT 57.739 37.500 0.00 0.00 0.00 2.71
295 296 6.668645 TGTTGGAGGCAGGTAATATACAATT 58.331 36.000 0.00 0.00 0.00 2.32
296 297 6.545666 TGTTGGAGGCAGGTAATATACAATTG 59.454 38.462 3.24 3.24 0.00 2.32
297 298 6.260700 TGGAGGCAGGTAATATACAATTGT 57.739 37.500 16.68 16.68 0.00 2.71
298 299 7.381789 TGGAGGCAGGTAATATACAATTGTA 57.618 36.000 20.14 20.14 34.67 2.41
299 300 7.450074 TGGAGGCAGGTAATATACAATTGTAG 58.550 38.462 22.03 8.33 33.52 2.74
300 301 7.291416 TGGAGGCAGGTAATATACAATTGTAGA 59.709 37.037 22.03 18.59 33.52 2.59
301 302 7.819900 GGAGGCAGGTAATATACAATTGTAGAG 59.180 40.741 22.03 7.36 33.52 2.43
302 303 8.492415 AGGCAGGTAATATACAATTGTAGAGA 57.508 34.615 22.03 11.31 33.52 3.10
303 304 8.589338 AGGCAGGTAATATACAATTGTAGAGAG 58.411 37.037 22.03 8.71 33.52 3.20
304 305 8.368668 GGCAGGTAATATACAATTGTAGAGAGT 58.631 37.037 22.03 12.22 33.52 3.24
305 306 9.765795 GCAGGTAATATACAATTGTAGAGAGTT 57.234 33.333 22.03 12.23 33.52 3.01
307 308 9.765795 AGGTAATATACAATTGTAGAGAGTTGC 57.234 33.333 22.03 12.70 33.52 4.17
308 309 9.542462 GGTAATATACAATTGTAGAGAGTTGCA 57.458 33.333 22.03 0.00 33.52 4.08
311 312 6.992063 ATACAATTGTAGAGAGTTGCAAGG 57.008 37.500 22.03 0.00 33.52 3.61
312 313 3.503748 ACAATTGTAGAGAGTTGCAAGGC 59.496 43.478 9.97 0.00 0.00 4.35
313 314 3.710209 ATTGTAGAGAGTTGCAAGGCT 57.290 42.857 0.00 0.00 0.00 4.58
314 315 4.826274 ATTGTAGAGAGTTGCAAGGCTA 57.174 40.909 0.00 0.00 0.00 3.93
315 316 3.876274 TGTAGAGAGTTGCAAGGCTAG 57.124 47.619 0.00 0.00 0.00 3.42
316 317 2.093973 TGTAGAGAGTTGCAAGGCTAGC 60.094 50.000 6.04 6.04 0.00 3.42
317 318 0.979665 AGAGAGTTGCAAGGCTAGCA 59.020 50.000 18.24 0.00 40.85 3.49
341 342 6.897259 AAAAATCTAGTATTGTAAGCGCGA 57.103 33.333 12.10 0.00 0.00 5.87
342 343 7.478520 AAAAATCTAGTATTGTAAGCGCGAT 57.521 32.000 12.10 0.00 0.00 4.58
343 344 7.478520 AAAATCTAGTATTGTAAGCGCGATT 57.521 32.000 16.20 16.20 0.00 3.34
344 345 7.478520 AAATCTAGTATTGTAAGCGCGATTT 57.521 32.000 17.40 8.34 0.00 2.17
345 346 8.583810 AAATCTAGTATTGTAAGCGCGATTTA 57.416 30.769 17.40 7.20 29.74 1.40
346 347 8.583810 AATCTAGTATTGTAAGCGCGATTTAA 57.416 30.769 17.40 11.98 0.00 1.52
347 348 7.618964 TCTAGTATTGTAAGCGCGATTTAAG 57.381 36.000 17.40 2.88 0.00 1.85
348 349 7.198390 TCTAGTATTGTAAGCGCGATTTAAGT 58.802 34.615 17.40 3.32 0.00 2.24
349 350 6.032722 AGTATTGTAAGCGCGATTTAAGTG 57.967 37.500 17.40 0.00 0.00 3.16
350 351 3.733024 TTGTAAGCGCGATTTAAGTGG 57.267 42.857 17.40 0.00 0.00 4.00
351 352 2.690786 TGTAAGCGCGATTTAAGTGGT 58.309 42.857 17.40 0.00 0.00 4.16
352 353 2.669434 TGTAAGCGCGATTTAAGTGGTC 59.331 45.455 17.40 0.00 0.00 4.02
353 354 2.094762 AAGCGCGATTTAAGTGGTCT 57.905 45.000 12.10 0.00 0.00 3.85
354 355 1.641577 AGCGCGATTTAAGTGGTCTC 58.358 50.000 12.10 0.00 0.00 3.36
355 356 1.204941 AGCGCGATTTAAGTGGTCTCT 59.795 47.619 12.10 0.00 0.00 3.10
356 357 1.588861 GCGCGATTTAAGTGGTCTCTC 59.411 52.381 12.10 0.00 0.00 3.20
357 358 1.846782 CGCGATTTAAGTGGTCTCTCG 59.153 52.381 0.00 0.00 0.00 4.04
358 359 2.477357 CGCGATTTAAGTGGTCTCTCGA 60.477 50.000 0.00 0.00 0.00 4.04
359 360 3.707793 GCGATTTAAGTGGTCTCTCGAT 58.292 45.455 0.00 0.00 0.00 3.59
360 361 4.113354 GCGATTTAAGTGGTCTCTCGATT 58.887 43.478 0.00 0.00 0.00 3.34
361 362 4.026475 GCGATTTAAGTGGTCTCTCGATTG 60.026 45.833 0.00 0.00 0.00 2.67
362 363 5.103000 CGATTTAAGTGGTCTCTCGATTGT 58.897 41.667 0.00 0.00 0.00 2.71
363 364 5.004821 CGATTTAAGTGGTCTCTCGATTGTG 59.995 44.000 0.00 0.00 0.00 3.33
364 365 2.751166 AAGTGGTCTCTCGATTGTGG 57.249 50.000 0.00 0.00 0.00 4.17
365 366 1.633774 AGTGGTCTCTCGATTGTGGT 58.366 50.000 0.00 0.00 0.00 4.16
366 367 1.971357 AGTGGTCTCTCGATTGTGGTT 59.029 47.619 0.00 0.00 0.00 3.67
367 368 2.368875 AGTGGTCTCTCGATTGTGGTTT 59.631 45.455 0.00 0.00 0.00 3.27
368 369 2.737252 GTGGTCTCTCGATTGTGGTTTC 59.263 50.000 0.00 0.00 0.00 2.78
369 370 2.632996 TGGTCTCTCGATTGTGGTTTCT 59.367 45.455 0.00 0.00 0.00 2.52
370 371 2.996621 GGTCTCTCGATTGTGGTTTCTG 59.003 50.000 0.00 0.00 0.00 3.02
371 372 3.306088 GGTCTCTCGATTGTGGTTTCTGA 60.306 47.826 0.00 0.00 0.00 3.27
372 373 3.923461 GTCTCTCGATTGTGGTTTCTGAG 59.077 47.826 0.00 0.00 0.00 3.35
373 374 2.670414 CTCTCGATTGTGGTTTCTGAGC 59.330 50.000 0.00 0.00 0.00 4.26
374 375 2.300152 TCTCGATTGTGGTTTCTGAGCT 59.700 45.455 0.00 0.00 0.00 4.09
375 376 3.070018 CTCGATTGTGGTTTCTGAGCTT 58.930 45.455 0.00 0.00 0.00 3.74
376 377 2.807967 TCGATTGTGGTTTCTGAGCTTG 59.192 45.455 0.00 0.00 0.00 4.01
377 378 2.666619 CGATTGTGGTTTCTGAGCTTGC 60.667 50.000 0.00 0.00 0.00 4.01
378 379 2.057137 TTGTGGTTTCTGAGCTTGCT 57.943 45.000 0.00 0.00 0.00 3.91
379 380 2.057137 TGTGGTTTCTGAGCTTGCTT 57.943 45.000 0.00 0.00 0.00 3.91
380 381 2.378038 TGTGGTTTCTGAGCTTGCTTT 58.622 42.857 0.00 0.00 0.00 3.51
381 382 2.099592 TGTGGTTTCTGAGCTTGCTTTG 59.900 45.455 0.00 0.00 0.00 2.77
382 383 2.099756 GTGGTTTCTGAGCTTGCTTTGT 59.900 45.455 0.00 0.00 0.00 2.83
383 384 2.099592 TGGTTTCTGAGCTTGCTTTGTG 59.900 45.455 0.00 0.00 0.00 3.33
384 385 2.544486 GGTTTCTGAGCTTGCTTTGTGG 60.544 50.000 0.00 0.00 0.00 4.17
385 386 2.057137 TTCTGAGCTTGCTTTGTGGT 57.943 45.000 0.00 0.00 0.00 4.16
386 387 1.311859 TCTGAGCTTGCTTTGTGGTG 58.688 50.000 0.00 0.00 0.00 4.17
387 388 1.027357 CTGAGCTTGCTTTGTGGTGT 58.973 50.000 0.00 0.00 0.00 4.16
388 389 1.406539 CTGAGCTTGCTTTGTGGTGTT 59.593 47.619 0.00 0.00 0.00 3.32
389 390 2.618241 CTGAGCTTGCTTTGTGGTGTTA 59.382 45.455 0.00 0.00 0.00 2.41
390 391 2.618241 TGAGCTTGCTTTGTGGTGTTAG 59.382 45.455 0.00 0.00 0.00 2.34
391 392 1.956477 AGCTTGCTTTGTGGTGTTAGG 59.044 47.619 0.00 0.00 0.00 2.69
392 393 1.953686 GCTTGCTTTGTGGTGTTAGGA 59.046 47.619 0.00 0.00 0.00 2.94
393 394 2.558359 GCTTGCTTTGTGGTGTTAGGAT 59.442 45.455 0.00 0.00 0.00 3.24
394 395 3.005791 GCTTGCTTTGTGGTGTTAGGATT 59.994 43.478 0.00 0.00 0.00 3.01
395 396 4.217550 GCTTGCTTTGTGGTGTTAGGATTA 59.782 41.667 0.00 0.00 0.00 1.75
396 397 5.619981 GCTTGCTTTGTGGTGTTAGGATTAG 60.620 44.000 0.00 0.00 0.00 1.73
397 398 4.980573 TGCTTTGTGGTGTTAGGATTAGT 58.019 39.130 0.00 0.00 0.00 2.24
398 399 4.759693 TGCTTTGTGGTGTTAGGATTAGTG 59.240 41.667 0.00 0.00 0.00 2.74
399 400 4.760204 GCTTTGTGGTGTTAGGATTAGTGT 59.240 41.667 0.00 0.00 0.00 3.55
400 401 5.240844 GCTTTGTGGTGTTAGGATTAGTGTT 59.759 40.000 0.00 0.00 0.00 3.32
401 402 6.428771 GCTTTGTGGTGTTAGGATTAGTGTTA 59.571 38.462 0.00 0.00 0.00 2.41
402 403 7.120726 GCTTTGTGGTGTTAGGATTAGTGTTAT 59.879 37.037 0.00 0.00 0.00 1.89
403 404 8.556213 TTTGTGGTGTTAGGATTAGTGTTATC 57.444 34.615 0.00 0.00 0.00 1.75
404 405 7.490657 TGTGGTGTTAGGATTAGTGTTATCT 57.509 36.000 0.00 0.00 0.00 1.98
405 406 7.327975 TGTGGTGTTAGGATTAGTGTTATCTG 58.672 38.462 0.00 0.00 0.00 2.90
406 407 7.038587 TGTGGTGTTAGGATTAGTGTTATCTGT 60.039 37.037 0.00 0.00 0.00 3.41
407 408 7.277981 GTGGTGTTAGGATTAGTGTTATCTGTG 59.722 40.741 0.00 0.00 0.00 3.66
408 409 6.761714 GGTGTTAGGATTAGTGTTATCTGTGG 59.238 42.308 0.00 0.00 0.00 4.17
409 410 7.328737 GTGTTAGGATTAGTGTTATCTGTGGT 58.671 38.462 0.00 0.00 0.00 4.16
410 411 7.277981 GTGTTAGGATTAGTGTTATCTGTGGTG 59.722 40.741 0.00 0.00 0.00 4.17
411 412 4.770795 AGGATTAGTGTTATCTGTGGTGC 58.229 43.478 0.00 0.00 0.00 5.01
412 413 4.471386 AGGATTAGTGTTATCTGTGGTGCT 59.529 41.667 0.00 0.00 0.00 4.40
413 414 5.661312 AGGATTAGTGTTATCTGTGGTGCTA 59.339 40.000 0.00 0.00 0.00 3.49
414 415 5.753921 GGATTAGTGTTATCTGTGGTGCTAC 59.246 44.000 0.00 0.00 0.00 3.58
415 416 3.611766 AGTGTTATCTGTGGTGCTACC 57.388 47.619 0.00 0.00 39.22 3.18
416 417 3.173965 AGTGTTATCTGTGGTGCTACCT 58.826 45.455 6.83 0.00 39.58 3.08
417 418 3.055819 AGTGTTATCTGTGGTGCTACCTG 60.056 47.826 6.83 0.00 39.58 4.00
418 419 3.056107 GTGTTATCTGTGGTGCTACCTGA 60.056 47.826 6.83 3.86 39.58 3.86
419 420 3.774766 TGTTATCTGTGGTGCTACCTGAT 59.225 43.478 6.83 9.21 39.58 2.90
420 421 4.225042 TGTTATCTGTGGTGCTACCTGATT 59.775 41.667 6.83 0.00 39.58 2.57
421 422 5.186198 GTTATCTGTGGTGCTACCTGATTT 58.814 41.667 6.83 0.00 39.58 2.17
422 423 3.788227 TCTGTGGTGCTACCTGATTTT 57.212 42.857 6.83 0.00 39.58 1.82
423 424 4.098914 TCTGTGGTGCTACCTGATTTTT 57.901 40.909 6.83 0.00 39.58 1.94
424 425 3.820467 TCTGTGGTGCTACCTGATTTTTG 59.180 43.478 6.83 0.00 39.58 2.44
425 426 2.890311 TGTGGTGCTACCTGATTTTTGG 59.110 45.455 6.83 0.00 39.58 3.28
426 427 2.231235 GTGGTGCTACCTGATTTTTGGG 59.769 50.000 6.83 0.00 39.58 4.12
427 428 2.158385 TGGTGCTACCTGATTTTTGGGT 60.158 45.455 6.83 0.00 39.58 4.51
428 429 3.074687 TGGTGCTACCTGATTTTTGGGTA 59.925 43.478 6.83 0.00 39.58 3.69
432 433 4.965119 CTACCTGATTTTTGGGTAGTGC 57.035 45.455 9.46 0.00 44.30 4.40
433 434 2.159382 ACCTGATTTTTGGGTAGTGCG 58.841 47.619 0.00 0.00 0.00 5.34
434 435 2.159382 CCTGATTTTTGGGTAGTGCGT 58.841 47.619 0.00 0.00 0.00 5.24
435 436 3.244630 ACCTGATTTTTGGGTAGTGCGTA 60.245 43.478 0.00 0.00 0.00 4.42
436 437 3.374058 CCTGATTTTTGGGTAGTGCGTAG 59.626 47.826 0.00 0.00 0.00 3.51
437 438 4.000988 CTGATTTTTGGGTAGTGCGTAGT 58.999 43.478 0.00 0.00 0.00 2.73
438 439 3.749088 TGATTTTTGGGTAGTGCGTAGTG 59.251 43.478 0.00 0.00 0.00 2.74
439 440 2.172851 TTTTGGGTAGTGCGTAGTGG 57.827 50.000 0.00 0.00 0.00 4.00
440 441 1.050204 TTTGGGTAGTGCGTAGTGGT 58.950 50.000 0.00 0.00 0.00 4.16
441 442 0.319083 TTGGGTAGTGCGTAGTGGTG 59.681 55.000 0.00 0.00 0.00 4.17
442 443 1.217244 GGGTAGTGCGTAGTGGTGG 59.783 63.158 0.00 0.00 0.00 4.61
443 444 1.447314 GGTAGTGCGTAGTGGTGGC 60.447 63.158 0.00 0.00 0.00 5.01
444 445 1.590147 GTAGTGCGTAGTGGTGGCT 59.410 57.895 0.00 0.00 0.00 4.75
445 446 0.037605 GTAGTGCGTAGTGGTGGCTT 60.038 55.000 0.00 0.00 0.00 4.35
446 447 0.682852 TAGTGCGTAGTGGTGGCTTT 59.317 50.000 0.00 0.00 0.00 3.51
447 448 0.179029 AGTGCGTAGTGGTGGCTTTT 60.179 50.000 0.00 0.00 0.00 2.27
448 449 0.237498 GTGCGTAGTGGTGGCTTTTC 59.763 55.000 0.00 0.00 0.00 2.29
449 450 0.107831 TGCGTAGTGGTGGCTTTTCT 59.892 50.000 0.00 0.00 0.00 2.52
450 451 0.517316 GCGTAGTGGTGGCTTTTCTG 59.483 55.000 0.00 0.00 0.00 3.02
451 452 1.876416 GCGTAGTGGTGGCTTTTCTGA 60.876 52.381 0.00 0.00 0.00 3.27
452 453 2.699954 CGTAGTGGTGGCTTTTCTGAT 58.300 47.619 0.00 0.00 0.00 2.90
453 454 3.857052 CGTAGTGGTGGCTTTTCTGATA 58.143 45.455 0.00 0.00 0.00 2.15
454 455 3.865745 CGTAGTGGTGGCTTTTCTGATAG 59.134 47.826 0.00 0.00 0.00 2.08
455 456 4.620803 CGTAGTGGTGGCTTTTCTGATAGT 60.621 45.833 0.00 0.00 0.00 2.12
456 457 3.679389 AGTGGTGGCTTTTCTGATAGTG 58.321 45.455 0.00 0.00 0.00 2.74
457 458 2.162408 GTGGTGGCTTTTCTGATAGTGC 59.838 50.000 0.00 0.00 0.00 4.40
458 459 2.040278 TGGTGGCTTTTCTGATAGTGCT 59.960 45.455 0.00 0.00 0.00 4.40
459 460 3.084786 GGTGGCTTTTCTGATAGTGCTT 58.915 45.455 0.00 0.00 0.00 3.91
460 461 3.507622 GGTGGCTTTTCTGATAGTGCTTT 59.492 43.478 0.00 0.00 0.00 3.51
461 462 4.479619 GTGGCTTTTCTGATAGTGCTTTG 58.520 43.478 0.00 0.00 0.00 2.77
462 463 4.216257 GTGGCTTTTCTGATAGTGCTTTGA 59.784 41.667 0.00 0.00 0.00 2.69
463 464 4.826733 TGGCTTTTCTGATAGTGCTTTGAA 59.173 37.500 0.00 0.00 0.00 2.69
464 465 5.157067 GGCTTTTCTGATAGTGCTTTGAAC 58.843 41.667 0.00 0.00 0.00 3.18
465 466 5.048434 GGCTTTTCTGATAGTGCTTTGAACT 60.048 40.000 0.00 0.00 0.00 3.01
466 467 5.855395 GCTTTTCTGATAGTGCTTTGAACTG 59.145 40.000 0.00 0.00 0.00 3.16
467 468 6.514048 GCTTTTCTGATAGTGCTTTGAACTGT 60.514 38.462 0.00 0.00 0.00 3.55
468 469 6.545504 TTTCTGATAGTGCTTTGAACTGTC 57.454 37.500 0.00 0.00 36.59 3.51
469 470 5.474578 TCTGATAGTGCTTTGAACTGTCT 57.525 39.130 4.51 0.00 36.89 3.41
470 471 5.858381 TCTGATAGTGCTTTGAACTGTCTT 58.142 37.500 4.51 0.00 36.89 3.01
471 472 5.928839 TCTGATAGTGCTTTGAACTGTCTTC 59.071 40.000 4.51 0.00 36.89 2.87
472 473 5.858381 TGATAGTGCTTTGAACTGTCTTCT 58.142 37.500 4.51 0.00 36.89 2.85
473 474 6.291377 TGATAGTGCTTTGAACTGTCTTCTT 58.709 36.000 4.51 0.00 36.89 2.52
474 475 6.425114 TGATAGTGCTTTGAACTGTCTTCTTC 59.575 38.462 4.51 0.00 36.89 2.87
475 476 3.879892 AGTGCTTTGAACTGTCTTCTTCC 59.120 43.478 0.00 0.00 0.00 3.46
476 477 3.879892 GTGCTTTGAACTGTCTTCTTCCT 59.120 43.478 0.00 0.00 0.00 3.36
477 478 4.024472 GTGCTTTGAACTGTCTTCTTCCTC 60.024 45.833 0.00 0.00 0.00 3.71
478 479 3.500299 GCTTTGAACTGTCTTCTTCCTCC 59.500 47.826 0.00 0.00 0.00 4.30
479 480 4.745172 GCTTTGAACTGTCTTCTTCCTCCT 60.745 45.833 0.00 0.00 0.00 3.69
480 481 5.372373 CTTTGAACTGTCTTCTTCCTCCTT 58.628 41.667 0.00 0.00 0.00 3.36
481 482 4.608948 TGAACTGTCTTCTTCCTCCTTC 57.391 45.455 0.00 0.00 0.00 3.46
482 483 3.967326 TGAACTGTCTTCTTCCTCCTTCA 59.033 43.478 0.00 0.00 0.00 3.02
483 484 4.202264 TGAACTGTCTTCTTCCTCCTTCAC 60.202 45.833 0.00 0.00 0.00 3.18
484 485 2.297597 ACTGTCTTCTTCCTCCTTCACG 59.702 50.000 0.00 0.00 0.00 4.35
485 486 1.000955 TGTCTTCTTCCTCCTTCACGC 59.999 52.381 0.00 0.00 0.00 5.34
486 487 0.608640 TCTTCTTCCTCCTTCACGCC 59.391 55.000 0.00 0.00 0.00 5.68
487 488 0.610687 CTTCTTCCTCCTTCACGCCT 59.389 55.000 0.00 0.00 0.00 5.52
488 489 1.002544 CTTCTTCCTCCTTCACGCCTT 59.997 52.381 0.00 0.00 0.00 4.35
489 490 1.056660 TCTTCCTCCTTCACGCCTTT 58.943 50.000 0.00 0.00 0.00 3.11
490 491 1.420138 TCTTCCTCCTTCACGCCTTTT 59.580 47.619 0.00 0.00 0.00 2.27
491 492 2.635915 TCTTCCTCCTTCACGCCTTTTA 59.364 45.455 0.00 0.00 0.00 1.52
492 493 3.263425 TCTTCCTCCTTCACGCCTTTTAT 59.737 43.478 0.00 0.00 0.00 1.40
493 494 4.468510 TCTTCCTCCTTCACGCCTTTTATA 59.531 41.667 0.00 0.00 0.00 0.98
494 495 4.133013 TCCTCCTTCACGCCTTTTATAC 57.867 45.455 0.00 0.00 0.00 1.47
495 496 3.118519 TCCTCCTTCACGCCTTTTATACC 60.119 47.826 0.00 0.00 0.00 2.73
496 497 3.370103 CCTCCTTCACGCCTTTTATACCA 60.370 47.826 0.00 0.00 0.00 3.25
497 498 4.258543 CTCCTTCACGCCTTTTATACCAA 58.741 43.478 0.00 0.00 0.00 3.67
498 499 4.653868 TCCTTCACGCCTTTTATACCAAA 58.346 39.130 0.00 0.00 0.00 3.28
499 500 5.071370 TCCTTCACGCCTTTTATACCAAAA 58.929 37.500 0.00 0.00 0.00 2.44
500 501 5.048573 TCCTTCACGCCTTTTATACCAAAAC 60.049 40.000 0.00 0.00 0.00 2.43
501 502 5.048294 CCTTCACGCCTTTTATACCAAAACT 60.048 40.000 0.00 0.00 0.00 2.66
502 503 5.616488 TCACGCCTTTTATACCAAAACTC 57.384 39.130 0.00 0.00 0.00 3.01
503 504 5.310451 TCACGCCTTTTATACCAAAACTCT 58.690 37.500 0.00 0.00 0.00 3.24
508 509 7.773690 ACGCCTTTTATACCAAAACTCTGATAT 59.226 33.333 0.00 0.00 0.00 1.63
523 524 8.894768 AACTCTGATATTGTATTTGTAGGAGC 57.105 34.615 0.00 0.00 0.00 4.70
608 610 9.753674 ACCATAAAATGAGAAGAAACCATTAGA 57.246 29.630 0.00 0.00 31.07 2.10
624 626 7.067496 ACCATTAGATAATCGGAATCACACT 57.933 36.000 7.58 0.00 0.00 3.55
843 927 4.504916 CCACGCCGCTCTCCTCTG 62.505 72.222 0.00 0.00 0.00 3.35
844 928 3.443925 CACGCCGCTCTCCTCTGA 61.444 66.667 0.00 0.00 0.00 3.27
845 929 3.444805 ACGCCGCTCTCCTCTGAC 61.445 66.667 0.00 0.00 0.00 3.51
846 930 4.200283 CGCCGCTCTCCTCTGACC 62.200 72.222 0.00 0.00 0.00 4.02
1386 1475 2.216148 CATCTCCTGGAGGTCCCAC 58.784 63.158 23.00 0.00 40.82 4.61
1412 1501 4.274978 AGCTCCCTCTTCACTTCTAGTAC 58.725 47.826 0.00 0.00 0.00 2.73
1433 1522 2.288666 TGCGTTGCTCTGTTTTTCTCT 58.711 42.857 0.00 0.00 0.00 3.10
1434 1523 2.682856 TGCGTTGCTCTGTTTTTCTCTT 59.317 40.909 0.00 0.00 0.00 2.85
1435 1524 3.128589 TGCGTTGCTCTGTTTTTCTCTTT 59.871 39.130 0.00 0.00 0.00 2.52
1436 1525 4.334203 TGCGTTGCTCTGTTTTTCTCTTTA 59.666 37.500 0.00 0.00 0.00 1.85
1437 1526 5.163703 TGCGTTGCTCTGTTTTTCTCTTTAA 60.164 36.000 0.00 0.00 0.00 1.52
1464 1553 5.049060 GGGTGTTTGAATTTTATTTGGTGCC 60.049 40.000 0.00 0.00 0.00 5.01
1475 1564 2.341846 TTTGGTGCCTCCGGAATATC 57.658 50.000 5.23 0.00 39.52 1.63
1541 1630 1.410882 GGAGGGAAGTCTCTCGATTGG 59.589 57.143 2.13 0.00 34.39 3.16
1542 1631 0.827368 AGGGAAGTCTCTCGATTGGC 59.173 55.000 0.00 0.00 0.00 4.52
1543 1632 0.528684 GGGAAGTCTCTCGATTGGCG 60.529 60.000 0.00 0.00 42.69 5.69
1544 1633 1.148759 GGAAGTCTCTCGATTGGCGC 61.149 60.000 0.00 0.00 40.61 6.53
1545 1634 0.458543 GAAGTCTCTCGATTGGCGCA 60.459 55.000 10.83 0.00 40.61 6.09
1546 1635 0.459237 AAGTCTCTCGATTGGCGCAG 60.459 55.000 10.83 0.00 40.61 5.18
1547 1636 1.153745 GTCTCTCGATTGGCGCAGT 60.154 57.895 10.83 0.00 40.61 4.40
1548 1637 0.737715 GTCTCTCGATTGGCGCAGTT 60.738 55.000 10.83 0.00 40.61 3.16
1551 1640 0.320334 TCTCGATTGGCGCAGTTCAA 60.320 50.000 10.83 4.19 40.61 2.69
1564 1653 4.559153 CGCAGTTCAATTCAGGGAAAATT 58.441 39.130 0.00 0.00 0.00 1.82
1588 1677 3.688272 CAGATGTGATGATTTTGGCGTC 58.312 45.455 0.00 0.00 0.00 5.19
1660 1749 6.152932 ACTGATGGGAAAATCATGTTATGC 57.847 37.500 0.00 0.00 36.03 3.14
1668 1757 9.160496 TGGGAAAATCATGTTATGCAAAAATAC 57.840 29.630 0.00 0.00 0.00 1.89
1707 1796 5.874093 AGTGGAAACATTCTGAAGACATCT 58.126 37.500 0.00 0.00 46.14 2.90
1737 1826 6.794493 TGATAATTCATGGAGGGGATCTAACT 59.206 38.462 0.00 0.00 0.00 2.24
1744 1833 5.888982 TGGAGGGGATCTAACTCAATTAC 57.111 43.478 11.84 0.00 32.98 1.89
1748 1837 6.463190 GGAGGGGATCTAACTCAATTACTGTC 60.463 46.154 11.84 0.00 32.98 3.51
1762 1851 1.717032 ACTGTCCAGTAGGCACTTGA 58.283 50.000 0.00 0.00 40.43 3.02
1765 1854 1.895798 TGTCCAGTAGGCACTTGAGAG 59.104 52.381 0.00 0.00 41.75 3.20
1780 1869 5.698089 CACTTGAGAGAACAGAAGCATGTTA 59.302 40.000 0.00 0.00 43.32 2.41
1781 1870 5.698545 ACTTGAGAGAACAGAAGCATGTTAC 59.301 40.000 0.00 1.63 43.32 2.50
1782 1871 4.569943 TGAGAGAACAGAAGCATGTTACC 58.430 43.478 0.00 0.00 43.32 2.85
1783 1872 3.935828 GAGAGAACAGAAGCATGTTACCC 59.064 47.826 0.00 0.00 43.32 3.69
1784 1873 3.327757 AGAGAACAGAAGCATGTTACCCA 59.672 43.478 0.00 0.00 43.32 4.51
1785 1874 3.412386 AGAACAGAAGCATGTTACCCAC 58.588 45.455 0.00 0.00 43.32 4.61
1786 1875 3.073062 AGAACAGAAGCATGTTACCCACT 59.927 43.478 0.00 0.00 43.32 4.00
1787 1876 3.508845 ACAGAAGCATGTTACCCACTT 57.491 42.857 0.00 0.00 0.00 3.16
1788 1877 4.634012 ACAGAAGCATGTTACCCACTTA 57.366 40.909 0.00 0.00 0.00 2.24
1789 1878 5.179452 ACAGAAGCATGTTACCCACTTAT 57.821 39.130 0.00 0.00 0.00 1.73
1790 1879 5.186198 ACAGAAGCATGTTACCCACTTATC 58.814 41.667 0.00 0.00 0.00 1.75
1791 1880 4.271049 CAGAAGCATGTTACCCACTTATCG 59.729 45.833 0.00 0.00 0.00 2.92
1792 1881 3.906720 AGCATGTTACCCACTTATCGT 57.093 42.857 0.00 0.00 0.00 3.73
1793 1882 3.793559 AGCATGTTACCCACTTATCGTC 58.206 45.455 0.00 0.00 0.00 4.20
1794 1883 3.451178 AGCATGTTACCCACTTATCGTCT 59.549 43.478 0.00 0.00 0.00 4.18
1795 1884 4.647853 AGCATGTTACCCACTTATCGTCTA 59.352 41.667 0.00 0.00 0.00 2.59
1796 1885 4.982916 GCATGTTACCCACTTATCGTCTAG 59.017 45.833 0.00 0.00 0.00 2.43
1797 1886 4.644103 TGTTACCCACTTATCGTCTAGC 57.356 45.455 0.00 0.00 0.00 3.42
1798 1887 4.018490 TGTTACCCACTTATCGTCTAGCA 58.982 43.478 0.00 0.00 0.00 3.49
1799 1888 4.463539 TGTTACCCACTTATCGTCTAGCAA 59.536 41.667 0.00 0.00 0.00 3.91
1800 1889 3.521947 ACCCACTTATCGTCTAGCAAC 57.478 47.619 0.00 0.00 0.00 4.17
1801 1890 3.097614 ACCCACTTATCGTCTAGCAACT 58.902 45.455 0.00 0.00 0.00 3.16
1802 1891 3.119101 ACCCACTTATCGTCTAGCAACTG 60.119 47.826 0.00 0.00 0.00 3.16
1850 1962 3.311596 ACTTACTTTCACAAACGCCTGTC 59.688 43.478 0.00 0.00 0.00 3.51
1975 2087 3.821421 ATTTAGGAGTAGGCAGGAACG 57.179 47.619 0.00 0.00 0.00 3.95
2120 2232 4.799949 CCAGATTTGTTCATACCAAATGCG 59.200 41.667 3.33 0.00 41.34 4.73
2768 2880 5.843969 TCCTATGGTAAATATGCTCTGTCCA 59.156 40.000 0.00 0.00 0.00 4.02
2787 2899 6.548321 TGTCCAAATACCTCTAAACACCAAT 58.452 36.000 0.00 0.00 0.00 3.16
2946 3059 7.704899 CGTCATGTTGTTATAGTGGATGACTTA 59.295 37.037 0.00 0.00 37.26 2.24
3124 3238 5.873712 ACTTCATCAAGAGTGTAAGCTGATG 59.126 40.000 4.37 4.37 33.34 3.07
3730 3857 5.348986 TCCTACAGCGACACATAAAATCTC 58.651 41.667 0.00 0.00 0.00 2.75
3761 3888 6.121776 TCCTTGCATCCTACTTTCTTGTTA 57.878 37.500 0.00 0.00 0.00 2.41
3767 3894 6.208402 TGCATCCTACTTTCTTGTTAATGCAA 59.792 34.615 3.91 0.00 42.64 4.08
3848 3975 1.410153 AGCTGGAGTGGCAAAAACAAG 59.590 47.619 0.00 0.00 0.00 3.16
3912 4053 3.080300 ACCCACTTTTGACTGTTCACA 57.920 42.857 0.00 0.00 0.00 3.58
3919 4060 7.032580 CCACTTTTGACTGTTCACACAAATAA 58.967 34.615 0.00 0.00 33.38 1.40
3921 4062 7.754924 CACTTTTGACTGTTCACACAAATAACT 59.245 33.333 0.00 0.00 33.38 2.24
4066 4207 1.523758 GTGTGAAGCACTACCCAAGG 58.476 55.000 0.00 0.00 44.41 3.61
4079 4220 1.342975 ACCCAAGGAAAGCTTTGTGGT 60.343 47.619 18.30 11.97 33.23 4.16
4117 4267 2.831685 TTTACAAGCCTGAGAAGCGA 57.168 45.000 0.00 0.00 34.64 4.93
4122 4272 0.326264 AAGCCTGAGAAGCGACCAAT 59.674 50.000 0.00 0.00 34.64 3.16
4179 4329 2.446435 GGGCCAGATGCAGAACTTAAA 58.554 47.619 4.39 0.00 43.89 1.52
4201 4401 0.765510 GTGGAAGAGGGTCTTGTGGT 59.234 55.000 0.00 0.00 36.73 4.16
4251 4452 4.436242 ACTTACCTCTGTGTACATGACG 57.564 45.455 0.00 0.00 0.00 4.35
4435 4639 2.336478 CGACTCGTGCCCTCTCACT 61.336 63.158 0.00 0.00 34.92 3.41
4498 4702 2.883386 CCTGGCAGATTCTATTGCTTCC 59.117 50.000 17.94 0.00 40.15 3.46
4574 4778 9.677567 TTGTTTAGTTCATTTTTCTAGCACATC 57.322 29.630 0.00 0.00 0.00 3.06
4612 4820 5.337578 TTTGCAGTAGTTTCTTTTGCCTT 57.662 34.783 0.00 0.00 33.98 4.35
4672 4880 3.639094 CCGAGAAACCTCAGATCCTACAT 59.361 47.826 0.00 0.00 0.00 2.29
4673 4881 4.261825 CCGAGAAACCTCAGATCCTACATC 60.262 50.000 0.00 0.00 0.00 3.06
4674 4882 4.582656 CGAGAAACCTCAGATCCTACATCT 59.417 45.833 0.00 0.00 0.00 2.90
4675 4883 5.068460 CGAGAAACCTCAGATCCTACATCTT 59.932 44.000 0.00 0.00 0.00 2.40
4676 4884 6.478512 AGAAACCTCAGATCCTACATCTTC 57.521 41.667 0.00 0.00 0.00 2.87
4677 4885 5.960811 AGAAACCTCAGATCCTACATCTTCA 59.039 40.000 0.00 0.00 0.00 3.02
4678 4886 5.867903 AACCTCAGATCCTACATCTTCAG 57.132 43.478 0.00 0.00 0.00 3.02
4679 4887 4.877773 ACCTCAGATCCTACATCTTCAGT 58.122 43.478 0.00 0.00 0.00 3.41
4697 4905 3.008049 TCAGTTCTTCACCTTAGGGAAGC 59.992 47.826 18.46 9.97 40.20 3.86
4719 4927 1.832883 TCAATGGATTGTTGGGACCG 58.167 50.000 0.00 0.00 38.84 4.79
4793 5001 9.049523 CAAGTGAGTCACATGTTTGCTATATAT 57.950 33.333 24.73 0.00 36.74 0.86
5381 5669 7.752695 AGGATAACTGAACTTAAATCGCTTTG 58.247 34.615 0.00 0.00 0.00 2.77
5392 5680 0.038166 ATCGCTTTGGCTTCCTTCCA 59.962 50.000 0.00 0.00 36.09 3.53
5406 5694 1.202770 CCTTCCAGTTGACGGGAAAGT 60.203 52.381 14.97 0.00 46.65 2.66
5415 5703 1.004918 ACGGGAAAGTTCTGAGCCG 60.005 57.895 0.00 0.00 35.38 5.52
5422 5710 1.222115 AAGTTCTGAGCCGTTGCGAC 61.222 55.000 0.00 0.00 44.33 5.19
5439 5727 2.661594 CGACGCGATGGATGAATCTAA 58.338 47.619 15.93 0.00 0.00 2.10
5442 5730 4.201532 CGACGCGATGGATGAATCTAAATC 60.202 45.833 15.93 0.00 0.00 2.17
5447 5735 5.154222 CGATGGATGAATCTAAATCGTCGA 58.846 41.667 0.00 0.00 35.44 4.20
5448 5736 5.284897 CGATGGATGAATCTAAATCGTCGAG 59.715 44.000 0.00 0.00 35.44 4.04
5464 5752 4.042398 CGTCGAGTCATCATAACCGAAAT 58.958 43.478 0.00 0.00 0.00 2.17
5465 5753 4.503007 CGTCGAGTCATCATAACCGAAATT 59.497 41.667 0.00 0.00 0.00 1.82
5477 6108 7.484975 TCATAACCGAAATTGTGTTTCACTTT 58.515 30.769 1.72 0.00 35.11 2.66
5506 6137 0.675633 CCCCTGTTTCACTGGCTTTG 59.324 55.000 0.00 0.00 36.06 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.320202 CCATCCGGTAAAACTGAAGTTGTG 60.320 45.833 0.00 0.00 38.44 3.33
1 2 3.818773 CCATCCGGTAAAACTGAAGTTGT 59.181 43.478 0.00 0.00 38.44 3.32
2 3 3.365969 GCCATCCGGTAAAACTGAAGTTG 60.366 47.826 0.00 0.00 34.61 3.16
3 4 2.817844 GCCATCCGGTAAAACTGAAGTT 59.182 45.455 0.00 0.00 35.44 2.66
4 5 2.039879 AGCCATCCGGTAAAACTGAAGT 59.960 45.455 0.00 0.00 33.28 3.01
5 6 2.711542 AGCCATCCGGTAAAACTGAAG 58.288 47.619 0.00 0.00 33.28 3.02
6 7 2.871096 AGCCATCCGGTAAAACTGAA 57.129 45.000 0.00 0.00 33.28 3.02
7 8 3.709653 AGATAGCCATCCGGTAAAACTGA 59.290 43.478 0.00 0.00 33.28 3.41
8 9 4.073293 AGATAGCCATCCGGTAAAACTG 57.927 45.455 0.00 0.00 33.28 3.16
9 10 4.772886 AAGATAGCCATCCGGTAAAACT 57.227 40.909 0.00 0.00 33.28 2.66
10 11 6.465084 AGATAAGATAGCCATCCGGTAAAAC 58.535 40.000 0.00 0.00 33.28 2.43
11 12 6.681729 AGATAAGATAGCCATCCGGTAAAA 57.318 37.500 0.00 0.00 33.28 1.52
12 13 6.681729 AAGATAAGATAGCCATCCGGTAAA 57.318 37.500 0.00 0.00 33.28 2.01
13 14 6.681729 AAAGATAAGATAGCCATCCGGTAA 57.318 37.500 0.00 0.00 33.28 2.85
14 15 6.464222 CAAAAGATAAGATAGCCATCCGGTA 58.536 40.000 0.00 0.00 33.28 4.02
15 16 5.308825 CAAAAGATAAGATAGCCATCCGGT 58.691 41.667 0.00 0.00 33.28 5.28
16 17 4.154918 GCAAAAGATAAGATAGCCATCCGG 59.845 45.833 0.00 0.00 0.00 5.14
17 18 4.999950 AGCAAAAGATAAGATAGCCATCCG 59.000 41.667 0.00 0.00 0.00 4.18
18 19 5.767168 ACAGCAAAAGATAAGATAGCCATCC 59.233 40.000 0.00 0.00 0.00 3.51
19 20 6.874288 ACAGCAAAAGATAAGATAGCCATC 57.126 37.500 0.00 0.00 0.00 3.51
20 21 7.059156 AGAACAGCAAAAGATAAGATAGCCAT 58.941 34.615 0.00 0.00 0.00 4.40
21 22 6.418101 AGAACAGCAAAAGATAAGATAGCCA 58.582 36.000 0.00 0.00 0.00 4.75
22 23 6.934048 AGAACAGCAAAAGATAAGATAGCC 57.066 37.500 0.00 0.00 0.00 3.93
23 24 6.690528 GCAAGAACAGCAAAAGATAAGATAGC 59.309 38.462 0.00 0.00 0.00 2.97
24 25 7.066766 AGGCAAGAACAGCAAAAGATAAGATAG 59.933 37.037 0.00 0.00 0.00 2.08
25 26 6.886459 AGGCAAGAACAGCAAAAGATAAGATA 59.114 34.615 0.00 0.00 0.00 1.98
26 27 5.713861 AGGCAAGAACAGCAAAAGATAAGAT 59.286 36.000 0.00 0.00 0.00 2.40
27 28 5.072741 AGGCAAGAACAGCAAAAGATAAGA 58.927 37.500 0.00 0.00 0.00 2.10
28 29 5.382618 AGGCAAGAACAGCAAAAGATAAG 57.617 39.130 0.00 0.00 0.00 1.73
29 30 5.106712 CGTAGGCAAGAACAGCAAAAGATAA 60.107 40.000 0.00 0.00 0.00 1.75
30 31 4.391830 CGTAGGCAAGAACAGCAAAAGATA 59.608 41.667 0.00 0.00 0.00 1.98
31 32 3.189287 CGTAGGCAAGAACAGCAAAAGAT 59.811 43.478 0.00 0.00 0.00 2.40
32 33 2.548057 CGTAGGCAAGAACAGCAAAAGA 59.452 45.455 0.00 0.00 0.00 2.52
33 34 2.350772 CCGTAGGCAAGAACAGCAAAAG 60.351 50.000 0.00 0.00 46.14 2.27
34 35 1.606668 CCGTAGGCAAGAACAGCAAAA 59.393 47.619 0.00 0.00 46.14 2.44
35 36 1.234821 CCGTAGGCAAGAACAGCAAA 58.765 50.000 0.00 0.00 46.14 3.68
36 37 2.927004 CCGTAGGCAAGAACAGCAA 58.073 52.632 0.00 0.00 46.14 3.91
37 38 4.693532 CCGTAGGCAAGAACAGCA 57.306 55.556 0.00 0.00 46.14 4.41
47 48 1.963464 TTCCAATCGGACCCGTAGGC 61.963 60.000 8.42 0.00 41.54 3.93
48 49 0.756903 ATTCCAATCGGACCCGTAGG 59.243 55.000 8.42 8.87 42.67 3.18
49 50 1.138266 ACATTCCAATCGGACCCGTAG 59.862 52.381 8.42 0.15 42.67 3.51
50 51 1.137479 GACATTCCAATCGGACCCGTA 59.863 52.381 8.42 0.00 42.67 4.02
51 52 0.107848 GACATTCCAATCGGACCCGT 60.108 55.000 8.42 0.00 42.67 5.28
52 53 1.151777 CGACATTCCAATCGGACCCG 61.152 60.000 1.31 1.31 42.67 5.28
53 54 0.107848 ACGACATTCCAATCGGACCC 60.108 55.000 0.00 0.00 42.67 4.46
54 55 1.734163 AACGACATTCCAATCGGACC 58.266 50.000 0.00 0.00 42.67 4.46
55 56 3.824414 AAAACGACATTCCAATCGGAC 57.176 42.857 0.00 0.00 42.67 4.79
56 57 3.815962 TGAAAAACGACATTCCAATCGGA 59.184 39.130 0.00 0.00 42.67 4.55
57 58 4.153958 TGAAAAACGACATTCCAATCGG 57.846 40.909 0.00 0.00 42.67 4.18
58 59 3.603770 GCTGAAAAACGACATTCCAATCG 59.396 43.478 0.00 0.00 43.97 3.34
59 60 4.618489 CAGCTGAAAAACGACATTCCAATC 59.382 41.667 8.42 0.00 0.00 2.67
60 61 4.278170 TCAGCTGAAAAACGACATTCCAAT 59.722 37.500 15.67 0.00 0.00 3.16
61 62 3.629855 TCAGCTGAAAAACGACATTCCAA 59.370 39.130 15.67 0.00 0.00 3.53
62 63 3.210227 TCAGCTGAAAAACGACATTCCA 58.790 40.909 15.67 0.00 0.00 3.53
63 64 3.896648 TCAGCTGAAAAACGACATTCC 57.103 42.857 15.67 0.00 0.00 3.01
64 65 6.370593 TGTATTCAGCTGAAAAACGACATTC 58.629 36.000 31.55 11.83 37.61 2.67
65 66 6.312399 TGTATTCAGCTGAAAAACGACATT 57.688 33.333 31.55 14.97 37.61 2.71
66 67 5.940192 TGTATTCAGCTGAAAAACGACAT 57.060 34.783 31.55 15.68 37.61 3.06
67 68 5.504994 GGTTGTATTCAGCTGAAAAACGACA 60.505 40.000 36.62 28.84 38.64 4.35
68 69 4.909880 GGTTGTATTCAGCTGAAAAACGAC 59.090 41.667 33.12 33.12 37.50 4.34
69 70 4.576873 TGGTTGTATTCAGCTGAAAAACGA 59.423 37.500 31.55 26.08 37.61 3.85
70 71 4.854399 TGGTTGTATTCAGCTGAAAAACG 58.146 39.130 31.55 0.00 37.61 3.60
71 72 6.446318 TGATGGTTGTATTCAGCTGAAAAAC 58.554 36.000 31.55 29.34 37.61 2.43
72 73 6.647334 TGATGGTTGTATTCAGCTGAAAAA 57.353 33.333 31.55 22.07 37.61 1.94
73 74 6.647334 TTGATGGTTGTATTCAGCTGAAAA 57.353 33.333 31.55 19.16 37.61 2.29
74 75 6.647334 TTTGATGGTTGTATTCAGCTGAAA 57.353 33.333 31.55 18.13 37.61 2.69
75 76 6.839124 ATTTGATGGTTGTATTCAGCTGAA 57.161 33.333 30.23 30.23 38.56 3.02
76 77 9.056005 GTATATTTGATGGTTGTATTCAGCTGA 57.944 33.333 13.74 13.74 0.00 4.26
77 78 8.292448 GGTATATTTGATGGTTGTATTCAGCTG 58.708 37.037 7.63 7.63 0.00 4.24
78 79 7.998383 TGGTATATTTGATGGTTGTATTCAGCT 59.002 33.333 0.00 0.00 0.00 4.24
79 80 8.076178 GTGGTATATTTGATGGTTGTATTCAGC 58.924 37.037 0.00 0.00 0.00 4.26
80 81 9.119418 TGTGGTATATTTGATGGTTGTATTCAG 57.881 33.333 0.00 0.00 0.00 3.02
81 82 9.639563 ATGTGGTATATTTGATGGTTGTATTCA 57.360 29.630 0.00 0.00 0.00 2.57
85 86 9.554395 CTGTATGTGGTATATTTGATGGTTGTA 57.446 33.333 0.00 0.00 0.00 2.41
86 87 8.271458 TCTGTATGTGGTATATTTGATGGTTGT 58.729 33.333 0.00 0.00 0.00 3.32
87 88 8.675705 TCTGTATGTGGTATATTTGATGGTTG 57.324 34.615 0.00 0.00 0.00 3.77
88 89 9.693739 TTTCTGTATGTGGTATATTTGATGGTT 57.306 29.630 0.00 0.00 0.00 3.67
89 90 9.693739 TTTTCTGTATGTGGTATATTTGATGGT 57.306 29.630 0.00 0.00 0.00 3.55
113 114 2.099098 CAGTTGAAGTCTGCCGGTTTTT 59.901 45.455 1.90 0.00 0.00 1.94
114 115 1.676006 CAGTTGAAGTCTGCCGGTTTT 59.324 47.619 1.90 0.00 0.00 2.43
115 116 1.308998 CAGTTGAAGTCTGCCGGTTT 58.691 50.000 1.90 0.00 0.00 3.27
116 117 3.006672 CAGTTGAAGTCTGCCGGTT 57.993 52.632 1.90 0.00 0.00 4.44
117 118 4.779475 CAGTTGAAGTCTGCCGGT 57.221 55.556 1.90 0.00 0.00 5.28
122 123 0.940126 AAGCACGCAGTTGAAGTCTG 59.060 50.000 0.00 0.00 41.61 3.51
123 124 1.221414 GAAGCACGCAGTTGAAGTCT 58.779 50.000 0.00 0.00 41.61 3.24
124 125 0.111089 CGAAGCACGCAGTTGAAGTC 60.111 55.000 0.00 0.00 41.61 3.01
125 126 0.529773 TCGAAGCACGCAGTTGAAGT 60.530 50.000 0.00 0.00 41.61 3.01
126 127 0.792640 ATCGAAGCACGCAGTTGAAG 59.207 50.000 0.00 0.00 41.61 3.02
127 128 0.512518 CATCGAAGCACGCAGTTGAA 59.487 50.000 0.00 0.00 41.61 2.69
128 129 0.319469 TCATCGAAGCACGCAGTTGA 60.319 50.000 0.00 0.00 41.61 3.18
129 130 0.723414 ATCATCGAAGCACGCAGTTG 59.277 50.000 0.00 0.00 41.61 3.16
130 131 1.002366 GATCATCGAAGCACGCAGTT 58.998 50.000 0.00 0.00 41.61 3.16
131 132 1.142185 CGATCATCGAAGCACGCAGT 61.142 55.000 0.00 0.00 43.74 4.40
132 133 1.142185 ACGATCATCGAAGCACGCAG 61.142 55.000 15.60 0.00 43.74 5.18
133 134 0.735978 AACGATCATCGAAGCACGCA 60.736 50.000 15.60 0.00 43.74 5.24
134 135 0.370273 AAACGATCATCGAAGCACGC 59.630 50.000 15.60 0.00 43.74 5.34
135 136 1.005975 GGAAACGATCATCGAAGCACG 60.006 52.381 15.60 0.00 43.74 5.34
136 137 2.721129 GGAAACGATCATCGAAGCAC 57.279 50.000 15.60 0.32 43.74 4.40
150 151 2.347755 GGAACGATTACTGCTCGGAAAC 59.652 50.000 0.00 0.00 40.37 2.78
151 152 2.028839 TGGAACGATTACTGCTCGGAAA 60.029 45.455 0.00 0.00 40.37 3.13
152 153 1.546923 TGGAACGATTACTGCTCGGAA 59.453 47.619 0.00 0.00 40.37 4.30
153 154 1.135199 GTGGAACGATTACTGCTCGGA 60.135 52.381 0.00 0.00 40.37 4.55
154 155 1.278238 GTGGAACGATTACTGCTCGG 58.722 55.000 0.00 0.00 40.37 4.63
167 168 5.105432 GGATAATCTAGGATACCCGTGGAAC 60.105 48.000 0.00 0.00 37.58 3.62
168 169 5.021458 GGATAATCTAGGATACCCGTGGAA 58.979 45.833 0.00 0.00 37.58 3.53
169 170 4.294168 AGGATAATCTAGGATACCCGTGGA 59.706 45.833 0.00 0.00 37.58 4.02
170 171 4.611367 AGGATAATCTAGGATACCCGTGG 58.389 47.826 0.00 0.00 37.58 4.94
171 172 5.480772 ACAAGGATAATCTAGGATACCCGTG 59.519 44.000 0.00 0.00 37.58 4.94
172 173 5.652324 ACAAGGATAATCTAGGATACCCGT 58.348 41.667 0.00 0.00 37.58 5.28
173 174 7.014422 GGATACAAGGATAATCTAGGATACCCG 59.986 44.444 0.00 0.00 37.58 5.28
174 175 8.252624 GGATACAAGGATAATCTAGGATACCC 57.747 42.308 0.00 0.00 37.17 3.69
194 195 5.867174 GGCATTTTGTTTACAGGTTGGATAC 59.133 40.000 0.00 0.00 0.00 2.24
195 196 5.777732 AGGCATTTTGTTTACAGGTTGGATA 59.222 36.000 0.00 0.00 0.00 2.59
196 197 4.592778 AGGCATTTTGTTTACAGGTTGGAT 59.407 37.500 0.00 0.00 0.00 3.41
197 198 3.964031 AGGCATTTTGTTTACAGGTTGGA 59.036 39.130 0.00 0.00 0.00 3.53
198 199 4.202202 TGAGGCATTTTGTTTACAGGTTGG 60.202 41.667 0.00 0.00 0.00 3.77
199 200 4.744631 GTGAGGCATTTTGTTTACAGGTTG 59.255 41.667 0.00 0.00 0.00 3.77
200 201 4.202212 GGTGAGGCATTTTGTTTACAGGTT 60.202 41.667 0.00 0.00 0.00 3.50
201 202 3.320826 GGTGAGGCATTTTGTTTACAGGT 59.679 43.478 0.00 0.00 0.00 4.00
202 203 3.573967 AGGTGAGGCATTTTGTTTACAGG 59.426 43.478 0.00 0.00 0.00 4.00
203 204 4.853924 AGGTGAGGCATTTTGTTTACAG 57.146 40.909 0.00 0.00 0.00 2.74
204 205 6.007076 TCATAGGTGAGGCATTTTGTTTACA 58.993 36.000 0.00 0.00 0.00 2.41
205 206 6.322491 GTCATAGGTGAGGCATTTTGTTTAC 58.678 40.000 0.00 0.00 34.36 2.01
206 207 5.417580 GGTCATAGGTGAGGCATTTTGTTTA 59.582 40.000 0.00 0.00 34.36 2.01
207 208 4.220602 GGTCATAGGTGAGGCATTTTGTTT 59.779 41.667 0.00 0.00 34.36 2.83
208 209 3.763897 GGTCATAGGTGAGGCATTTTGTT 59.236 43.478 0.00 0.00 34.36 2.83
209 210 3.356290 GGTCATAGGTGAGGCATTTTGT 58.644 45.455 0.00 0.00 34.36 2.83
210 211 2.355756 CGGTCATAGGTGAGGCATTTTG 59.644 50.000 0.00 0.00 34.36 2.44
211 212 2.643551 CGGTCATAGGTGAGGCATTTT 58.356 47.619 0.00 0.00 34.36 1.82
212 213 1.134098 CCGGTCATAGGTGAGGCATTT 60.134 52.381 0.00 0.00 34.36 2.32
213 214 0.469917 CCGGTCATAGGTGAGGCATT 59.530 55.000 0.00 0.00 34.36 3.56
214 215 0.691078 ACCGGTCATAGGTGAGGCAT 60.691 55.000 0.00 0.00 41.10 4.40
215 216 0.907704 AACCGGTCATAGGTGAGGCA 60.908 55.000 8.04 0.00 41.95 4.75
216 217 0.252197 AAACCGGTCATAGGTGAGGC 59.748 55.000 8.04 0.00 41.95 4.70
217 218 1.134491 GGAAACCGGTCATAGGTGAGG 60.134 57.143 8.04 0.00 41.95 3.86
218 219 1.134491 GGGAAACCGGTCATAGGTGAG 60.134 57.143 8.04 0.00 41.95 3.51
219 220 0.906775 GGGAAACCGGTCATAGGTGA 59.093 55.000 8.04 0.00 41.95 4.02
220 221 3.471354 GGGAAACCGGTCATAGGTG 57.529 57.895 8.04 0.00 41.95 4.00
232 233 2.261430 AATACGAGGGCCGGGGAAAC 62.261 60.000 2.18 0.00 43.93 2.78
233 234 1.564483 AAATACGAGGGCCGGGGAAA 61.564 55.000 2.18 0.00 43.93 3.13
234 235 0.690411 TAAATACGAGGGCCGGGGAA 60.690 55.000 2.18 0.00 43.93 3.97
235 236 0.472352 ATAAATACGAGGGCCGGGGA 60.472 55.000 2.18 0.00 43.93 4.81
236 237 0.036671 GATAAATACGAGGGCCGGGG 60.037 60.000 2.18 0.00 43.93 5.73
237 238 0.974383 AGATAAATACGAGGGCCGGG 59.026 55.000 2.18 0.00 43.93 5.73
238 239 1.893801 AGAGATAAATACGAGGGCCGG 59.106 52.381 0.00 0.00 43.93 6.13
239 240 2.094649 GGAGAGATAAATACGAGGGCCG 60.095 54.545 0.00 0.00 45.44 6.13
240 241 2.897969 TGGAGAGATAAATACGAGGGCC 59.102 50.000 0.00 0.00 0.00 5.80
241 242 4.220821 TGATGGAGAGATAAATACGAGGGC 59.779 45.833 0.00 0.00 0.00 5.19
242 243 5.712446 TCTGATGGAGAGATAAATACGAGGG 59.288 44.000 0.00 0.00 0.00 4.30
243 244 6.825944 TCTGATGGAGAGATAAATACGAGG 57.174 41.667 0.00 0.00 0.00 4.63
244 245 9.703892 AATTTCTGATGGAGAGATAAATACGAG 57.296 33.333 0.00 0.00 30.18 4.18
250 251 8.742777 CCAACAAATTTCTGATGGAGAGATAAA 58.257 33.333 1.16 0.00 40.73 1.40
251 252 8.108999 TCCAACAAATTTCTGATGGAGAGATAA 58.891 33.333 5.30 0.00 41.76 1.75
252 253 7.632861 TCCAACAAATTTCTGATGGAGAGATA 58.367 34.615 5.30 0.00 41.76 1.98
253 254 6.487828 TCCAACAAATTTCTGATGGAGAGAT 58.512 36.000 5.30 0.00 41.76 2.75
254 255 5.879763 TCCAACAAATTTCTGATGGAGAGA 58.120 37.500 5.30 0.00 41.76 3.10
258 259 3.511146 GCCTCCAACAAATTTCTGATGGA 59.489 43.478 8.39 8.39 43.70 3.41
259 260 3.258872 TGCCTCCAACAAATTTCTGATGG 59.741 43.478 1.02 1.02 39.87 3.51
260 261 4.491676 CTGCCTCCAACAAATTTCTGATG 58.508 43.478 0.00 0.00 0.00 3.07
261 262 3.512724 CCTGCCTCCAACAAATTTCTGAT 59.487 43.478 0.00 0.00 0.00 2.90
262 263 2.892852 CCTGCCTCCAACAAATTTCTGA 59.107 45.455 0.00 0.00 0.00 3.27
263 264 2.629617 ACCTGCCTCCAACAAATTTCTG 59.370 45.455 0.00 0.00 0.00 3.02
264 265 2.962859 ACCTGCCTCCAACAAATTTCT 58.037 42.857 0.00 0.00 0.00 2.52
265 266 4.864704 TTACCTGCCTCCAACAAATTTC 57.135 40.909 0.00 0.00 0.00 2.17
266 267 7.617723 TGTATATTACCTGCCTCCAACAAATTT 59.382 33.333 0.00 0.00 0.00 1.82
267 268 7.122715 TGTATATTACCTGCCTCCAACAAATT 58.877 34.615 0.00 0.00 0.00 1.82
268 269 6.668645 TGTATATTACCTGCCTCCAACAAAT 58.331 36.000 0.00 0.00 0.00 2.32
269 270 6.068461 TGTATATTACCTGCCTCCAACAAA 57.932 37.500 0.00 0.00 0.00 2.83
270 271 5.702065 TGTATATTACCTGCCTCCAACAA 57.298 39.130 0.00 0.00 0.00 2.83
271 272 5.702065 TTGTATATTACCTGCCTCCAACA 57.298 39.130 0.00 0.00 0.00 3.33
272 273 6.546034 ACAATTGTATATTACCTGCCTCCAAC 59.454 38.462 9.97 0.00 0.00 3.77
273 274 6.668645 ACAATTGTATATTACCTGCCTCCAA 58.331 36.000 9.97 0.00 0.00 3.53
274 275 6.260700 ACAATTGTATATTACCTGCCTCCA 57.739 37.500 9.97 0.00 0.00 3.86
275 276 7.676947 TCTACAATTGTATATTACCTGCCTCC 58.323 38.462 18.35 0.00 0.00 4.30
276 277 8.585881 TCTCTACAATTGTATATTACCTGCCTC 58.414 37.037 18.35 0.00 0.00 4.70
277 278 8.492415 TCTCTACAATTGTATATTACCTGCCT 57.508 34.615 18.35 0.00 0.00 4.75
278 279 8.368668 ACTCTCTACAATTGTATATTACCTGCC 58.631 37.037 18.35 0.00 0.00 4.85
279 280 9.765795 AACTCTCTACAATTGTATATTACCTGC 57.234 33.333 18.35 0.00 0.00 4.85
281 282 9.765795 GCAACTCTCTACAATTGTATATTACCT 57.234 33.333 18.35 0.00 0.00 3.08
282 283 9.542462 TGCAACTCTCTACAATTGTATATTACC 57.458 33.333 18.35 4.96 0.00 2.85
285 286 9.113838 CCTTGCAACTCTCTACAATTGTATATT 57.886 33.333 18.35 6.47 0.00 1.28
286 287 7.227512 GCCTTGCAACTCTCTACAATTGTATAT 59.772 37.037 18.35 0.82 0.00 0.86
287 288 6.538742 GCCTTGCAACTCTCTACAATTGTATA 59.461 38.462 18.35 10.77 0.00 1.47
288 289 5.355350 GCCTTGCAACTCTCTACAATTGTAT 59.645 40.000 18.35 0.78 0.00 2.29
289 290 4.695455 GCCTTGCAACTCTCTACAATTGTA 59.305 41.667 17.16 17.16 0.00 2.41
290 291 3.503748 GCCTTGCAACTCTCTACAATTGT 59.496 43.478 16.68 16.68 0.00 2.71
291 292 3.755378 AGCCTTGCAACTCTCTACAATTG 59.245 43.478 3.24 3.24 0.00 2.32
292 293 4.026356 AGCCTTGCAACTCTCTACAATT 57.974 40.909 0.00 0.00 0.00 2.32
293 294 3.710209 AGCCTTGCAACTCTCTACAAT 57.290 42.857 0.00 0.00 0.00 2.71
294 295 3.617531 GCTAGCCTTGCAACTCTCTACAA 60.618 47.826 2.29 0.00 0.00 2.41
295 296 2.093973 GCTAGCCTTGCAACTCTCTACA 60.094 50.000 2.29 0.00 0.00 2.74
296 297 2.093973 TGCTAGCCTTGCAACTCTCTAC 60.094 50.000 13.29 0.00 37.51 2.59
297 298 2.179427 TGCTAGCCTTGCAACTCTCTA 58.821 47.619 13.29 0.00 37.51 2.43
298 299 0.979665 TGCTAGCCTTGCAACTCTCT 59.020 50.000 13.29 0.00 37.51 3.10
299 300 1.813513 TTGCTAGCCTTGCAACTCTC 58.186 50.000 13.29 0.00 44.24 3.20
318 319 6.897259 TCGCGCTTACAATACTAGATTTTT 57.103 33.333 5.56 0.00 0.00 1.94
319 320 7.478520 AATCGCGCTTACAATACTAGATTTT 57.521 32.000 5.56 0.00 0.00 1.82
320 321 7.478520 AAATCGCGCTTACAATACTAGATTT 57.521 32.000 5.56 5.78 32.88 2.17
321 322 8.583810 TTAAATCGCGCTTACAATACTAGATT 57.416 30.769 5.56 0.00 0.00 2.40
322 323 7.866393 ACTTAAATCGCGCTTACAATACTAGAT 59.134 33.333 5.56 0.00 0.00 1.98
323 324 7.166970 CACTTAAATCGCGCTTACAATACTAGA 59.833 37.037 5.56 0.00 0.00 2.43
324 325 7.274367 CACTTAAATCGCGCTTACAATACTAG 58.726 38.462 5.56 0.00 0.00 2.57
325 326 6.199531 CCACTTAAATCGCGCTTACAATACTA 59.800 38.462 5.56 0.00 0.00 1.82
326 327 5.006358 CCACTTAAATCGCGCTTACAATACT 59.994 40.000 5.56 0.00 0.00 2.12
327 328 5.195379 CCACTTAAATCGCGCTTACAATAC 58.805 41.667 5.56 0.00 0.00 1.89
328 329 4.871557 ACCACTTAAATCGCGCTTACAATA 59.128 37.500 5.56 0.00 0.00 1.90
329 330 3.687698 ACCACTTAAATCGCGCTTACAAT 59.312 39.130 5.56 0.00 0.00 2.71
330 331 3.068560 ACCACTTAAATCGCGCTTACAA 58.931 40.909 5.56 0.00 0.00 2.41
331 332 2.669434 GACCACTTAAATCGCGCTTACA 59.331 45.455 5.56 0.00 0.00 2.41
332 333 2.928116 AGACCACTTAAATCGCGCTTAC 59.072 45.455 5.56 0.00 0.00 2.34
333 334 3.119245 AGAGACCACTTAAATCGCGCTTA 60.119 43.478 5.56 0.00 0.00 3.09
334 335 2.000447 GAGACCACTTAAATCGCGCTT 59.000 47.619 5.56 0.00 0.00 4.68
335 336 1.204941 AGAGACCACTTAAATCGCGCT 59.795 47.619 5.56 0.00 0.00 5.92
336 337 1.588861 GAGAGACCACTTAAATCGCGC 59.411 52.381 0.00 0.00 0.00 6.86
337 338 1.846782 CGAGAGACCACTTAAATCGCG 59.153 52.381 0.00 0.00 0.00 5.87
338 339 3.146618 TCGAGAGACCACTTAAATCGC 57.853 47.619 0.00 0.00 33.31 4.58
339 340 5.004821 CACAATCGAGAGACCACTTAAATCG 59.995 44.000 0.00 0.00 46.97 3.34
340 341 5.292101 CCACAATCGAGAGACCACTTAAATC 59.708 44.000 0.00 0.00 46.97 2.17
341 342 5.178797 CCACAATCGAGAGACCACTTAAAT 58.821 41.667 0.00 0.00 46.97 1.40
342 343 4.039973 ACCACAATCGAGAGACCACTTAAA 59.960 41.667 0.00 0.00 46.97 1.52
343 344 3.576982 ACCACAATCGAGAGACCACTTAA 59.423 43.478 0.00 0.00 46.97 1.85
344 345 3.162666 ACCACAATCGAGAGACCACTTA 58.837 45.455 0.00 0.00 46.97 2.24
345 346 1.971357 ACCACAATCGAGAGACCACTT 59.029 47.619 0.00 0.00 46.97 3.16
346 347 1.633774 ACCACAATCGAGAGACCACT 58.366 50.000 0.00 0.00 46.97 4.00
347 348 2.457366 AACCACAATCGAGAGACCAC 57.543 50.000 0.00 0.00 46.97 4.16
348 349 2.632996 AGAAACCACAATCGAGAGACCA 59.367 45.455 0.00 0.00 46.97 4.02
349 350 2.996621 CAGAAACCACAATCGAGAGACC 59.003 50.000 0.00 0.00 46.97 3.85
350 351 3.914312 TCAGAAACCACAATCGAGAGAC 58.086 45.455 0.00 0.00 46.97 3.36
352 353 2.670414 GCTCAGAAACCACAATCGAGAG 59.330 50.000 0.00 0.00 0.00 3.20
353 354 2.300152 AGCTCAGAAACCACAATCGAGA 59.700 45.455 0.00 0.00 0.00 4.04
354 355 2.693069 AGCTCAGAAACCACAATCGAG 58.307 47.619 0.00 0.00 0.00 4.04
355 356 2.807967 CAAGCTCAGAAACCACAATCGA 59.192 45.455 0.00 0.00 0.00 3.59
356 357 2.666619 GCAAGCTCAGAAACCACAATCG 60.667 50.000 0.00 0.00 0.00 3.34
357 358 2.555757 AGCAAGCTCAGAAACCACAATC 59.444 45.455 0.00 0.00 0.00 2.67
358 359 2.590821 AGCAAGCTCAGAAACCACAAT 58.409 42.857 0.00 0.00 0.00 2.71
359 360 2.057137 AGCAAGCTCAGAAACCACAA 57.943 45.000 0.00 0.00 0.00 3.33
360 361 2.057137 AAGCAAGCTCAGAAACCACA 57.943 45.000 0.00 0.00 0.00 4.17
361 362 2.099756 ACAAAGCAAGCTCAGAAACCAC 59.900 45.455 0.00 0.00 0.00 4.16
362 363 2.099592 CACAAAGCAAGCTCAGAAACCA 59.900 45.455 0.00 0.00 0.00 3.67
363 364 2.544486 CCACAAAGCAAGCTCAGAAACC 60.544 50.000 0.00 0.00 0.00 3.27
364 365 2.099756 ACCACAAAGCAAGCTCAGAAAC 59.900 45.455 0.00 0.00 0.00 2.78
365 366 2.099592 CACCACAAAGCAAGCTCAGAAA 59.900 45.455 0.00 0.00 0.00 2.52
366 367 1.677576 CACCACAAAGCAAGCTCAGAA 59.322 47.619 0.00 0.00 0.00 3.02
367 368 1.311859 CACCACAAAGCAAGCTCAGA 58.688 50.000 0.00 0.00 0.00 3.27
368 369 1.027357 ACACCACAAAGCAAGCTCAG 58.973 50.000 0.00 0.00 0.00 3.35
369 370 1.473258 AACACCACAAAGCAAGCTCA 58.527 45.000 0.00 0.00 0.00 4.26
370 371 2.030805 CCTAACACCACAAAGCAAGCTC 60.031 50.000 0.00 0.00 0.00 4.09
371 372 1.956477 CCTAACACCACAAAGCAAGCT 59.044 47.619 0.00 0.00 0.00 3.74
372 373 1.953686 TCCTAACACCACAAAGCAAGC 59.046 47.619 0.00 0.00 0.00 4.01
373 374 4.853924 AATCCTAACACCACAAAGCAAG 57.146 40.909 0.00 0.00 0.00 4.01
374 375 5.240623 CACTAATCCTAACACCACAAAGCAA 59.759 40.000 0.00 0.00 0.00 3.91
375 376 4.759693 CACTAATCCTAACACCACAAAGCA 59.240 41.667 0.00 0.00 0.00 3.91
376 377 4.760204 ACACTAATCCTAACACCACAAAGC 59.240 41.667 0.00 0.00 0.00 3.51
377 378 6.877611 AACACTAATCCTAACACCACAAAG 57.122 37.500 0.00 0.00 0.00 2.77
378 379 8.380099 AGATAACACTAATCCTAACACCACAAA 58.620 33.333 0.00 0.00 0.00 2.83
379 380 7.822334 CAGATAACACTAATCCTAACACCACAA 59.178 37.037 0.00 0.00 0.00 3.33
380 381 7.038587 ACAGATAACACTAATCCTAACACCACA 60.039 37.037 0.00 0.00 0.00 4.17
381 382 7.277981 CACAGATAACACTAATCCTAACACCAC 59.722 40.741 0.00 0.00 0.00 4.16
382 383 7.327975 CACAGATAACACTAATCCTAACACCA 58.672 38.462 0.00 0.00 0.00 4.17
383 384 6.761714 CCACAGATAACACTAATCCTAACACC 59.238 42.308 0.00 0.00 0.00 4.16
384 385 7.277981 CACCACAGATAACACTAATCCTAACAC 59.722 40.741 0.00 0.00 0.00 3.32
385 386 7.327975 CACCACAGATAACACTAATCCTAACA 58.672 38.462 0.00 0.00 0.00 2.41
386 387 6.258068 GCACCACAGATAACACTAATCCTAAC 59.742 42.308 0.00 0.00 0.00 2.34
387 388 6.156256 AGCACCACAGATAACACTAATCCTAA 59.844 38.462 0.00 0.00 0.00 2.69
388 389 5.661312 AGCACCACAGATAACACTAATCCTA 59.339 40.000 0.00 0.00 0.00 2.94
389 390 4.471386 AGCACCACAGATAACACTAATCCT 59.529 41.667 0.00 0.00 0.00 3.24
390 391 4.770795 AGCACCACAGATAACACTAATCC 58.229 43.478 0.00 0.00 0.00 3.01
391 392 5.753921 GGTAGCACCACAGATAACACTAATC 59.246 44.000 1.01 0.00 38.42 1.75
392 393 5.425539 AGGTAGCACCACAGATAACACTAAT 59.574 40.000 7.86 0.00 41.95 1.73
393 394 4.775780 AGGTAGCACCACAGATAACACTAA 59.224 41.667 7.86 0.00 41.95 2.24
394 395 4.159693 CAGGTAGCACCACAGATAACACTA 59.840 45.833 7.86 0.00 41.95 2.74
395 396 3.055819 CAGGTAGCACCACAGATAACACT 60.056 47.826 7.86 0.00 41.95 3.55
396 397 3.056107 TCAGGTAGCACCACAGATAACAC 60.056 47.826 7.86 0.00 41.95 3.32
397 398 3.169908 TCAGGTAGCACCACAGATAACA 58.830 45.455 7.86 0.00 41.95 2.41
398 399 3.887621 TCAGGTAGCACCACAGATAAC 57.112 47.619 7.86 0.00 41.95 1.89
399 400 5.435686 AAATCAGGTAGCACCACAGATAA 57.564 39.130 7.86 0.00 41.95 1.75
400 401 5.435686 AAAATCAGGTAGCACCACAGATA 57.564 39.130 7.86 0.00 41.95 1.98
401 402 4.307032 AAAATCAGGTAGCACCACAGAT 57.693 40.909 7.86 5.52 41.95 2.90
402 403 3.788227 AAAATCAGGTAGCACCACAGA 57.212 42.857 7.86 3.77 41.95 3.41
403 404 3.057315 CCAAAAATCAGGTAGCACCACAG 60.057 47.826 7.86 0.00 41.95 3.66
404 405 2.890311 CCAAAAATCAGGTAGCACCACA 59.110 45.455 7.86 0.00 41.95 4.17
405 406 2.231235 CCCAAAAATCAGGTAGCACCAC 59.769 50.000 7.86 0.00 41.95 4.16
406 407 2.158385 ACCCAAAAATCAGGTAGCACCA 60.158 45.455 7.86 0.00 41.95 4.17
407 408 2.525368 ACCCAAAAATCAGGTAGCACC 58.475 47.619 0.00 0.00 38.99 5.01
408 409 4.965119 CTACCCAAAAATCAGGTAGCAC 57.035 45.455 2.71 0.00 44.85 4.40
412 413 3.244630 ACGCACTACCCAAAAATCAGGTA 60.245 43.478 0.00 0.00 35.02 3.08
413 414 2.159382 CGCACTACCCAAAAATCAGGT 58.841 47.619 0.00 0.00 37.69 4.00
414 415 2.159382 ACGCACTACCCAAAAATCAGG 58.841 47.619 0.00 0.00 0.00 3.86
415 416 4.000988 ACTACGCACTACCCAAAAATCAG 58.999 43.478 0.00 0.00 0.00 2.90
416 417 3.749088 CACTACGCACTACCCAAAAATCA 59.251 43.478 0.00 0.00 0.00 2.57
417 418 3.126343 CCACTACGCACTACCCAAAAATC 59.874 47.826 0.00 0.00 0.00 2.17
418 419 3.078837 CCACTACGCACTACCCAAAAAT 58.921 45.455 0.00 0.00 0.00 1.82
419 420 2.158784 ACCACTACGCACTACCCAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
420 421 1.417145 ACCACTACGCACTACCCAAAA 59.583 47.619 0.00 0.00 0.00 2.44
421 422 1.050204 ACCACTACGCACTACCCAAA 58.950 50.000 0.00 0.00 0.00 3.28
422 423 0.319083 CACCACTACGCACTACCCAA 59.681 55.000 0.00 0.00 0.00 4.12
423 424 1.537814 CCACCACTACGCACTACCCA 61.538 60.000 0.00 0.00 0.00 4.51
424 425 1.217244 CCACCACTACGCACTACCC 59.783 63.158 0.00 0.00 0.00 3.69
425 426 1.447314 GCCACCACTACGCACTACC 60.447 63.158 0.00 0.00 0.00 3.18
426 427 0.037605 AAGCCACCACTACGCACTAC 60.038 55.000 0.00 0.00 0.00 2.73
427 428 0.682852 AAAGCCACCACTACGCACTA 59.317 50.000 0.00 0.00 0.00 2.74
428 429 0.179029 AAAAGCCACCACTACGCACT 60.179 50.000 0.00 0.00 0.00 4.40
429 430 0.237498 GAAAAGCCACCACTACGCAC 59.763 55.000 0.00 0.00 0.00 5.34
430 431 0.107831 AGAAAAGCCACCACTACGCA 59.892 50.000 0.00 0.00 0.00 5.24
431 432 0.517316 CAGAAAAGCCACCACTACGC 59.483 55.000 0.00 0.00 0.00 4.42
432 433 2.163818 TCAGAAAAGCCACCACTACG 57.836 50.000 0.00 0.00 0.00 3.51
433 434 4.631813 CACTATCAGAAAAGCCACCACTAC 59.368 45.833 0.00 0.00 0.00 2.73
434 435 4.832248 CACTATCAGAAAAGCCACCACTA 58.168 43.478 0.00 0.00 0.00 2.74
435 436 3.679389 CACTATCAGAAAAGCCACCACT 58.321 45.455 0.00 0.00 0.00 4.00
436 437 2.162408 GCACTATCAGAAAAGCCACCAC 59.838 50.000 0.00 0.00 0.00 4.16
437 438 2.040278 AGCACTATCAGAAAAGCCACCA 59.960 45.455 0.00 0.00 0.00 4.17
438 439 2.716217 AGCACTATCAGAAAAGCCACC 58.284 47.619 0.00 0.00 0.00 4.61
439 440 4.216257 TCAAAGCACTATCAGAAAAGCCAC 59.784 41.667 0.00 0.00 0.00 5.01
440 441 4.397420 TCAAAGCACTATCAGAAAAGCCA 58.603 39.130 0.00 0.00 0.00 4.75
441 442 5.048434 AGTTCAAAGCACTATCAGAAAAGCC 60.048 40.000 0.00 0.00 0.00 4.35
442 443 5.855395 CAGTTCAAAGCACTATCAGAAAAGC 59.145 40.000 0.00 0.00 0.00 3.51
443 444 6.963796 ACAGTTCAAAGCACTATCAGAAAAG 58.036 36.000 0.00 0.00 0.00 2.27
444 445 6.767902 AGACAGTTCAAAGCACTATCAGAAAA 59.232 34.615 0.00 0.00 0.00 2.29
445 446 6.291377 AGACAGTTCAAAGCACTATCAGAAA 58.709 36.000 0.00 0.00 0.00 2.52
446 447 5.858381 AGACAGTTCAAAGCACTATCAGAA 58.142 37.500 0.00 0.00 0.00 3.02
447 448 5.474578 AGACAGTTCAAAGCACTATCAGA 57.525 39.130 0.00 0.00 0.00 3.27
448 449 5.931146 AGAAGACAGTTCAAAGCACTATCAG 59.069 40.000 0.00 0.00 0.00 2.90
449 450 5.858381 AGAAGACAGTTCAAAGCACTATCA 58.142 37.500 0.00 0.00 0.00 2.15
450 451 6.128418 GGAAGAAGACAGTTCAAAGCACTATC 60.128 42.308 0.00 0.00 0.00 2.08
451 452 5.703130 GGAAGAAGACAGTTCAAAGCACTAT 59.297 40.000 0.00 0.00 0.00 2.12
452 453 5.057149 GGAAGAAGACAGTTCAAAGCACTA 58.943 41.667 0.00 0.00 0.00 2.74
453 454 3.879892 GGAAGAAGACAGTTCAAAGCACT 59.120 43.478 0.00 0.00 0.00 4.40
454 455 3.879892 AGGAAGAAGACAGTTCAAAGCAC 59.120 43.478 0.00 0.00 0.00 4.40
455 456 4.130118 GAGGAAGAAGACAGTTCAAAGCA 58.870 43.478 0.00 0.00 0.00 3.91
456 457 3.500299 GGAGGAAGAAGACAGTTCAAAGC 59.500 47.826 0.00 0.00 0.00 3.51
457 458 4.967036 AGGAGGAAGAAGACAGTTCAAAG 58.033 43.478 0.00 0.00 0.00 2.77
458 459 5.104527 TGAAGGAGGAAGAAGACAGTTCAAA 60.105 40.000 0.00 0.00 0.00 2.69
459 460 4.408921 TGAAGGAGGAAGAAGACAGTTCAA 59.591 41.667 0.00 0.00 0.00 2.69
460 461 3.967326 TGAAGGAGGAAGAAGACAGTTCA 59.033 43.478 0.00 0.00 0.00 3.18
461 462 4.311606 GTGAAGGAGGAAGAAGACAGTTC 58.688 47.826 0.00 0.00 0.00 3.01
462 463 3.243907 CGTGAAGGAGGAAGAAGACAGTT 60.244 47.826 0.00 0.00 0.00 3.16
463 464 2.297597 CGTGAAGGAGGAAGAAGACAGT 59.702 50.000 0.00 0.00 0.00 3.55
464 465 2.928731 GCGTGAAGGAGGAAGAAGACAG 60.929 54.545 0.00 0.00 0.00 3.51
465 466 1.000955 GCGTGAAGGAGGAAGAAGACA 59.999 52.381 0.00 0.00 0.00 3.41
466 467 1.673329 GGCGTGAAGGAGGAAGAAGAC 60.673 57.143 0.00 0.00 0.00 3.01
467 468 0.608640 GGCGTGAAGGAGGAAGAAGA 59.391 55.000 0.00 0.00 0.00 2.87
468 469 0.610687 AGGCGTGAAGGAGGAAGAAG 59.389 55.000 0.00 0.00 0.00 2.85
469 470 1.056660 AAGGCGTGAAGGAGGAAGAA 58.943 50.000 0.00 0.00 0.00 2.52
470 471 1.056660 AAAGGCGTGAAGGAGGAAGA 58.943 50.000 0.00 0.00 0.00 2.87
471 472 1.897560 AAAAGGCGTGAAGGAGGAAG 58.102 50.000 0.00 0.00 0.00 3.46
472 473 3.713826 ATAAAAGGCGTGAAGGAGGAA 57.286 42.857 0.00 0.00 0.00 3.36
473 474 3.118519 GGTATAAAAGGCGTGAAGGAGGA 60.119 47.826 0.00 0.00 0.00 3.71
474 475 3.203716 GGTATAAAAGGCGTGAAGGAGG 58.796 50.000 0.00 0.00 0.00 4.30
475 476 3.869065 TGGTATAAAAGGCGTGAAGGAG 58.131 45.455 0.00 0.00 0.00 3.69
476 477 3.985019 TGGTATAAAAGGCGTGAAGGA 57.015 42.857 0.00 0.00 0.00 3.36
477 478 5.048294 AGTTTTGGTATAAAAGGCGTGAAGG 60.048 40.000 0.00 0.00 0.00 3.46
478 479 6.009115 AGTTTTGGTATAAAAGGCGTGAAG 57.991 37.500 0.00 0.00 0.00 3.02
479 480 5.766174 AGAGTTTTGGTATAAAAGGCGTGAA 59.234 36.000 0.00 0.00 0.00 3.18
480 481 5.180492 CAGAGTTTTGGTATAAAAGGCGTGA 59.820 40.000 0.00 0.00 0.00 4.35
481 482 5.180492 TCAGAGTTTTGGTATAAAAGGCGTG 59.820 40.000 0.00 0.00 0.00 5.34
482 483 5.310451 TCAGAGTTTTGGTATAAAAGGCGT 58.690 37.500 0.00 0.00 0.00 5.68
483 484 5.873179 TCAGAGTTTTGGTATAAAAGGCG 57.127 39.130 0.00 0.00 0.00 5.52
484 485 9.736023 CAATATCAGAGTTTTGGTATAAAAGGC 57.264 33.333 0.00 0.00 0.00 4.35
497 498 9.331282 GCTCCTACAAATACAATATCAGAGTTT 57.669 33.333 0.00 0.00 0.00 2.66
498 499 8.486210 TGCTCCTACAAATACAATATCAGAGTT 58.514 33.333 0.00 0.00 0.00 3.01
499 500 8.023021 TGCTCCTACAAATACAATATCAGAGT 57.977 34.615 0.00 0.00 0.00 3.24
500 501 8.933807 CATGCTCCTACAAATACAATATCAGAG 58.066 37.037 0.00 0.00 0.00 3.35
501 502 8.432013 ACATGCTCCTACAAATACAATATCAGA 58.568 33.333 0.00 0.00 0.00 3.27
502 503 8.613060 ACATGCTCCTACAAATACAATATCAG 57.387 34.615 0.00 0.00 0.00 2.90
503 504 8.978874 AACATGCTCCTACAAATACAATATCA 57.021 30.769 0.00 0.00 0.00 2.15
589 591 9.277783 CCGATTATCTAATGGTTTCTTCTCATT 57.722 33.333 0.00 0.00 35.57 2.57
672 678 9.790389 AAACGTCATTTTTCTGTTGTTATGTTA 57.210 25.926 0.00 0.00 0.00 2.41
674 680 7.165154 CGAAACGTCATTTTTCTGTTGTTATGT 59.835 33.333 0.00 0.00 31.82 2.29
675 681 7.357206 CCGAAACGTCATTTTTCTGTTGTTATG 60.357 37.037 0.00 0.00 31.82 1.90
676 682 6.635239 CCGAAACGTCATTTTTCTGTTGTTAT 59.365 34.615 0.00 0.00 31.82 1.89
693 777 1.537562 GCCGATAAGGATCCGAAACGT 60.538 52.381 5.98 0.00 45.00 3.99
840 924 0.836400 GGGGTTGGACAGAGGTCAGA 60.836 60.000 0.00 0.00 46.17 3.27
841 925 1.679898 GGGGTTGGACAGAGGTCAG 59.320 63.158 0.00 0.00 46.17 3.51
842 926 2.214216 CGGGGTTGGACAGAGGTCA 61.214 63.158 0.00 0.00 46.17 4.02
843 927 1.911766 TCGGGGTTGGACAGAGGTC 60.912 63.158 0.00 0.00 43.55 3.85
844 928 2.203182 TCGGGGTTGGACAGAGGT 59.797 61.111 0.00 0.00 0.00 3.85
845 929 1.764571 TTGTCGGGGTTGGACAGAGG 61.765 60.000 0.00 0.00 44.47 3.69
846 930 0.324943 ATTGTCGGGGTTGGACAGAG 59.675 55.000 0.00 0.00 44.47 3.35
920 1008 4.974438 TGAACAGGCCGAGGGGGT 62.974 66.667 0.00 0.00 38.44 4.95
921 1009 4.410400 GTGAACAGGCCGAGGGGG 62.410 72.222 0.00 0.00 39.58 5.40
934 1022 1.545428 GGTTCTGATGTGGCAGGTGAA 60.545 52.381 0.00 0.00 36.55 3.18
1272 1361 1.817099 GATGCTCTTCTGTGCCCCG 60.817 63.158 0.00 0.00 32.27 5.73
1386 1475 1.261238 AAGTGAAGAGGGAGCTCGGG 61.261 60.000 7.83 0.00 0.00 5.14
1412 1501 2.289002 AGAGAAAAACAGAGCAACGCAG 59.711 45.455 0.00 0.00 0.00 5.18
1435 1524 9.853177 ACCAAATAAAATTCAAACACCCAATTA 57.147 25.926 0.00 0.00 0.00 1.40
1436 1525 8.628280 CACCAAATAAAATTCAAACACCCAATT 58.372 29.630 0.00 0.00 0.00 2.32
1437 1526 7.255416 GCACCAAATAAAATTCAAACACCCAAT 60.255 33.333 0.00 0.00 0.00 3.16
1475 1564 0.321564 TTGTGTGCCCAGAGAATCCG 60.322 55.000 0.00 0.00 33.66 4.18
1541 1630 0.881118 TTCCCTGAATTGAACTGCGC 59.119 50.000 0.00 0.00 0.00 6.09
1542 1631 3.641437 TTTTCCCTGAATTGAACTGCG 57.359 42.857 0.00 0.00 0.00 5.18
1543 1632 4.692155 CCAATTTTCCCTGAATTGAACTGC 59.308 41.667 10.26 0.00 43.71 4.40
1544 1633 4.692155 GCCAATTTTCCCTGAATTGAACTG 59.308 41.667 10.26 0.00 43.71 3.16
1545 1634 4.347583 TGCCAATTTTCCCTGAATTGAACT 59.652 37.500 10.26 0.00 43.71 3.01
1546 1635 4.640364 TGCCAATTTTCCCTGAATTGAAC 58.360 39.130 10.26 4.24 43.71 3.18
1547 1636 4.592351 TCTGCCAATTTTCCCTGAATTGAA 59.408 37.500 10.26 0.09 43.71 2.69
1548 1637 4.158786 TCTGCCAATTTTCCCTGAATTGA 58.841 39.130 10.26 0.00 43.71 2.57
1551 1640 4.081309 CACATCTGCCAATTTTCCCTGAAT 60.081 41.667 0.00 0.00 0.00 2.57
1564 1653 2.166870 GCCAAAATCATCACATCTGCCA 59.833 45.455 0.00 0.00 0.00 4.92
1588 1677 1.529438 TCTGCAAGTTTAAACGAGCCG 59.471 47.619 25.06 21.05 34.28 5.52
1645 1734 9.160496 TGGGTATTTTTGCATAACATGATTTTC 57.840 29.630 0.00 0.00 0.00 2.29
1707 1796 6.278438 TCCCCTCCATGAATTATCAATTGA 57.722 37.500 11.26 11.26 39.49 2.57
1720 1809 4.989875 ATTGAGTTAGATCCCCTCCATG 57.010 45.455 0.00 0.00 0.00 3.66
1737 1826 3.838317 AGTGCCTACTGGACAGTAATTGA 59.162 43.478 12.72 0.00 42.72 2.57
1744 1833 1.895798 TCTCAAGTGCCTACTGGACAG 59.104 52.381 0.00 0.00 37.19 3.51
1748 1837 2.300152 TGTTCTCTCAAGTGCCTACTGG 59.700 50.000 0.00 0.00 37.19 4.00
1762 1851 3.327757 TGGGTAACATGCTTCTGTTCTCT 59.672 43.478 0.00 0.00 39.88 3.10
1765 1854 3.412386 AGTGGGTAACATGCTTCTGTTC 58.588 45.455 0.00 0.00 39.88 3.18
1780 1869 3.097614 AGTTGCTAGACGATAAGTGGGT 58.902 45.455 0.00 0.00 0.00 4.51
1781 1870 3.130516 TCAGTTGCTAGACGATAAGTGGG 59.869 47.826 0.00 0.00 0.00 4.61
1782 1871 4.371855 TCAGTTGCTAGACGATAAGTGG 57.628 45.455 0.00 0.00 0.00 4.00
1783 1872 6.730175 AGTATCAGTTGCTAGACGATAAGTG 58.270 40.000 0.00 0.00 0.00 3.16
1784 1873 6.945938 AGTATCAGTTGCTAGACGATAAGT 57.054 37.500 0.00 0.00 0.00 2.24
1785 1874 7.862648 TGTAGTATCAGTTGCTAGACGATAAG 58.137 38.462 0.00 0.00 0.00 1.73
1786 1875 7.797038 TGTAGTATCAGTTGCTAGACGATAA 57.203 36.000 0.00 0.00 0.00 1.75
1787 1876 7.797038 TTGTAGTATCAGTTGCTAGACGATA 57.203 36.000 0.00 0.00 0.00 2.92
1788 1877 6.694877 TTGTAGTATCAGTTGCTAGACGAT 57.305 37.500 0.00 0.00 0.00 3.73
1789 1878 6.694877 ATTGTAGTATCAGTTGCTAGACGA 57.305 37.500 0.00 0.00 0.00 4.20
1790 1879 6.140895 CGAATTGTAGTATCAGTTGCTAGACG 59.859 42.308 0.00 0.00 0.00 4.18
1791 1880 6.074782 GCGAATTGTAGTATCAGTTGCTAGAC 60.075 42.308 0.00 0.00 0.00 2.59
1792 1881 5.977725 GCGAATTGTAGTATCAGTTGCTAGA 59.022 40.000 0.00 0.00 0.00 2.43
1793 1882 5.108217 CGCGAATTGTAGTATCAGTTGCTAG 60.108 44.000 0.00 0.00 0.00 3.42
1794 1883 4.738252 CGCGAATTGTAGTATCAGTTGCTA 59.262 41.667 0.00 0.00 0.00 3.49
1795 1884 3.551890 CGCGAATTGTAGTATCAGTTGCT 59.448 43.478 0.00 0.00 0.00 3.91
1796 1885 3.306166 ACGCGAATTGTAGTATCAGTTGC 59.694 43.478 15.93 0.00 0.00 4.17
1797 1886 5.969435 TCTACGCGAATTGTAGTATCAGTTG 59.031 40.000 15.93 0.00 40.15 3.16
1798 1887 6.127810 TCTACGCGAATTGTAGTATCAGTT 57.872 37.500 15.93 0.00 40.15 3.16
1799 1888 5.746307 TCTACGCGAATTGTAGTATCAGT 57.254 39.130 15.93 0.00 40.15 3.41
1800 1889 6.691818 AGTTTCTACGCGAATTGTAGTATCAG 59.308 38.462 15.93 0.00 40.15 2.90
1801 1890 6.471198 CAGTTTCTACGCGAATTGTAGTATCA 59.529 38.462 15.93 0.00 40.15 2.15
1802 1891 6.471519 ACAGTTTCTACGCGAATTGTAGTATC 59.528 38.462 15.93 0.00 40.15 2.24
1850 1962 5.151297 ACTAAATCAGTTTTTGGGCCATG 57.849 39.130 7.26 1.46 31.59 3.66
1905 2017 4.303086 ACACTATCAAATCTACGTCCCG 57.697 45.455 0.00 0.00 0.00 5.14
1921 2033 6.816140 TCAGAACATTGCGATGATTTACACTA 59.184 34.615 21.12 0.00 36.73 2.74
2036 2148 2.849294 ACAGGAGAGAGAAGTTTGGC 57.151 50.000 0.00 0.00 0.00 4.52
2120 2232 2.480555 CGCCCACGAATGTTCTGC 59.519 61.111 0.00 0.00 43.93 4.26
2583 2695 2.338015 GGACTCGGGCGTACTCACA 61.338 63.158 0.00 0.00 0.00 3.58
2632 2744 8.990163 TCAGACTGATACCATATAACACTGTA 57.010 34.615 0.00 0.00 0.00 2.74
2768 2880 8.531146 CAATTCCATTGGTGTTTAGAGGTATTT 58.469 33.333 1.86 0.00 36.63 1.40
2815 2928 6.928492 ACATTTTGCGGAAACAAGTCATTATT 59.072 30.769 0.00 0.00 0.00 1.40
2946 3059 1.424638 AAGTACCACCAGACTGCACT 58.575 50.000 0.00 0.00 0.00 4.40
3124 3238 2.751166 TCTGCACAGGAAACTAGAGC 57.249 50.000 0.00 0.00 40.21 4.09
3328 3442 9.857656 TGATTCAGGAGCAATAAAGAGAATATT 57.142 29.630 0.00 0.00 0.00 1.28
3329 3443 9.504708 CTGATTCAGGAGCAATAAAGAGAATAT 57.495 33.333 5.73 0.00 0.00 1.28
3330 3444 8.708378 TCTGATTCAGGAGCAATAAAGAGAATA 58.292 33.333 13.59 0.00 31.51 1.75
3331 3445 7.571919 TCTGATTCAGGAGCAATAAAGAGAAT 58.428 34.615 13.59 0.00 31.51 2.40
3493 3611 3.963129 AGGTGAAAGGTTTGACAGTGAA 58.037 40.909 0.00 0.00 0.00 3.18
3501 3619 6.180472 AGATGTATGGTAGGTGAAAGGTTTG 58.820 40.000 0.00 0.00 0.00 2.93
3627 3752 3.142174 GGACAAGTTTGCAGCTAGAAGT 58.858 45.455 0.00 0.00 0.00 3.01
3686 3813 4.022762 GGAACTGGAAGCCTTCTTTCTTTC 60.023 45.833 4.15 1.34 37.60 2.62
3730 3857 6.461110 AAGTAGGATGCAAGGAAAATCATG 57.539 37.500 0.00 0.00 0.00 3.07
3767 3894 3.093814 TGAAAACATGATGCAGCTCCAT 58.906 40.909 2.53 0.00 0.00 3.41
3848 3975 4.202182 GGTGTTAGGACAAAAGGGAAAACC 60.202 45.833 0.00 0.00 37.57 3.27
3919 4060 7.074653 TGGAGTTGAAACCTTATAAGACAGT 57.925 36.000 14.28 0.63 0.00 3.55
3921 4062 7.942341 ACATTGGAGTTGAAACCTTATAAGACA 59.058 33.333 14.28 5.92 0.00 3.41
3958 4099 4.210331 GCCTCAATGGTGAATTAGGATGT 58.790 43.478 0.00 0.00 38.35 3.06
4050 4191 2.814097 GCTTTCCTTGGGTAGTGCTTCA 60.814 50.000 0.00 0.00 0.00 3.02
4065 4206 2.922335 GCATCGAACCACAAAGCTTTCC 60.922 50.000 9.23 0.00 0.00 3.13
4066 4207 2.287547 TGCATCGAACCACAAAGCTTTC 60.288 45.455 9.23 0.00 0.00 2.62
4079 4220 9.340695 CTTGTAAATAACTTTCAATGCATCGAA 57.659 29.630 0.00 0.00 0.00 3.71
4117 4267 3.685550 GCATTGTACTCTGGGCTATTGGT 60.686 47.826 0.00 0.00 0.00 3.67
4122 4272 2.837591 TGAAGCATTGTACTCTGGGCTA 59.162 45.455 0.00 0.00 0.00 3.93
4169 4319 3.746492 CCTCTTCCACGGTTTAAGTTCTG 59.254 47.826 0.00 0.00 0.00 3.02
4179 4329 0.763223 ACAAGACCCTCTTCCACGGT 60.763 55.000 0.00 0.00 33.78 4.83
4201 4401 5.579511 GCACGCTCAGTATTTTTAAGTCCTA 59.420 40.000 0.00 0.00 0.00 2.94
4435 4639 0.179234 TGTCCTTGACCGCTTCAACA 59.821 50.000 0.00 0.00 39.45 3.33
4498 4702 2.935201 AGCTTGCTAAATCTGAAGAGCG 59.065 45.455 0.00 0.00 37.77 5.03
4672 4880 4.489737 TCCCTAAGGTGAAGAACTGAAGA 58.510 43.478 0.00 0.00 0.00 2.87
4673 4881 4.891992 TCCCTAAGGTGAAGAACTGAAG 57.108 45.455 0.00 0.00 0.00 3.02
4674 4882 4.505039 GCTTCCCTAAGGTGAAGAACTGAA 60.505 45.833 12.91 0.00 40.30 3.02
4675 4883 3.008049 GCTTCCCTAAGGTGAAGAACTGA 59.992 47.826 12.91 0.00 40.30 3.41
4676 4884 3.339141 GCTTCCCTAAGGTGAAGAACTG 58.661 50.000 12.91 0.00 40.30 3.16
4677 4885 2.028020 CGCTTCCCTAAGGTGAAGAACT 60.028 50.000 12.91 0.00 40.30 3.01
4678 4886 2.289506 ACGCTTCCCTAAGGTGAAGAAC 60.290 50.000 12.91 0.00 40.30 3.01
4679 4887 1.975680 ACGCTTCCCTAAGGTGAAGAA 59.024 47.619 12.91 0.00 40.30 2.52
4697 4905 2.094752 GGTCCCAACAATCCATTGAACG 60.095 50.000 6.29 0.00 40.14 3.95
4719 4927 7.862873 GGCATACTATCCTAGAAATGTTTTTGC 59.137 37.037 0.00 0.00 0.00 3.68
4860 5068 2.091885 ACCGGAATCAGCCACCATAAAT 60.092 45.455 9.46 0.00 0.00 1.40
5343 5621 3.686726 CAGTTATCCTTTGGCAGACAGTC 59.313 47.826 0.00 0.00 0.00 3.51
5352 5630 6.967199 GCGATTTAAGTTCAGTTATCCTTTGG 59.033 38.462 0.00 0.00 0.00 3.28
5381 5669 0.955919 CCGTCAACTGGAAGGAAGCC 60.956 60.000 0.00 0.00 46.90 4.35
5392 5680 2.807108 GCTCAGAACTTTCCCGTCAACT 60.807 50.000 0.00 0.00 0.00 3.16
5406 5694 2.733218 CGTCGCAACGGCTCAGAA 60.733 61.111 0.00 0.00 45.21 3.02
5415 5703 1.692148 TTCATCCATCGCGTCGCAAC 61.692 55.000 18.75 0.00 0.00 4.17
5422 5710 3.675225 ACGATTTAGATTCATCCATCGCG 59.325 43.478 0.00 0.00 36.22 5.87
5423 5711 4.201532 CGACGATTTAGATTCATCCATCGC 60.202 45.833 11.09 6.11 36.22 4.58
5424 5712 5.154222 TCGACGATTTAGATTCATCCATCG 58.846 41.667 0.00 10.15 37.57 3.84
5425 5713 6.153067 ACTCGACGATTTAGATTCATCCATC 58.847 40.000 0.00 0.00 0.00 3.51
5426 5714 6.090483 ACTCGACGATTTAGATTCATCCAT 57.910 37.500 0.00 0.00 0.00 3.41
5439 5727 3.314357 TCGGTTATGATGACTCGACGATT 59.686 43.478 0.00 0.00 0.00 3.34
5442 5730 2.750301 TCGGTTATGATGACTCGACG 57.250 50.000 0.00 0.00 0.00 5.12
5447 5735 6.817765 AACACAATTTCGGTTATGATGACT 57.182 33.333 0.00 0.00 0.00 3.41
5448 5736 7.060633 GTGAAACACAATTTCGGTTATGATGAC 59.939 37.037 0.00 0.00 36.32 3.06
5464 5752 5.009610 GGAGAAGGCATAAAGTGAAACACAA 59.990 40.000 4.75 0.00 41.43 3.33
5465 5753 4.518970 GGAGAAGGCATAAAGTGAAACACA 59.481 41.667 4.75 0.00 41.43 3.72
5477 6108 2.026262 GTGAAACAGGGGAGAAGGCATA 60.026 50.000 0.00 0.00 36.32 3.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.