Multiple sequence alignment - TraesCS3D01G283800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G283800 chr3D 100.000 5242 0 0 1 5242 392059992 392054751 0.000000e+00 9681.0
1 TraesCS3D01G283800 chr3D 78.404 639 99 12 3 611 291755614 291756243 3.830000e-101 379.0
2 TraesCS3D01G283800 chr3D 78.086 648 101 17 1 618 295266731 295266095 6.410000e-99 372.0
3 TraesCS3D01G283800 chr3D 79.819 441 52 21 1 415 42767547 42767118 2.390000e-73 287.0
4 TraesCS3D01G283800 chr3D 75.080 622 119 20 1 597 105107820 105108430 1.870000e-64 257.0
5 TraesCS3D01G283800 chr3D 89.262 149 7 2 3000 3147 392056843 392056703 1.500000e-40 178.0
6 TraesCS3D01G283800 chr3D 89.262 149 7 2 3150 3290 392056993 392056846 1.500000e-40 178.0
7 TraesCS3D01G283800 chr3A 91.290 1837 113 19 2190 4010 512311538 512309733 0.000000e+00 2462.0
8 TraesCS3D01G283800 chr3A 90.045 1326 67 23 830 2108 512312847 512311540 0.000000e+00 1657.0
9 TraesCS3D01G283800 chr3A 83.790 839 87 23 1 823 512313632 512312827 0.000000e+00 750.0
10 TraesCS3D01G283800 chr3A 88.636 572 38 9 4009 4571 512309574 512309021 0.000000e+00 671.0
11 TraesCS3D01G283800 chr3A 89.370 254 13 8 4999 5242 512308622 512308373 1.830000e-79 307.0
12 TraesCS3D01G283800 chr3A 93.388 121 6 1 3149 3269 512310735 512310617 1.500000e-40 178.0
13 TraesCS3D01G283800 chr3A 79.487 273 17 14 4723 4977 512309026 512308775 1.950000e-34 158.0
14 TraesCS3D01G283800 chr3A 94.000 50 3 0 2581 2630 512311098 512311049 5.630000e-10 76.8
15 TraesCS3D01G283800 chr3B 93.990 1381 47 11 919 2277 511075937 511074571 0.000000e+00 2058.0
16 TraesCS3D01G283800 chr3B 91.964 784 50 9 3664 4439 511072924 511072146 0.000000e+00 1086.0
17 TraesCS3D01G283800 chr3B 94.372 693 28 5 2489 3170 511074268 511073576 0.000000e+00 1053.0
18 TraesCS3D01G283800 chr3B 94.094 491 23 3 3108 3597 511073576 511073091 0.000000e+00 741.0
19 TraesCS3D01G283800 chr3B 88.628 554 30 16 4710 5242 511072049 511071508 1.230000e-180 643.0
20 TraesCS3D01G283800 chr3B 92.233 206 13 3 667 871 511076143 511075940 6.640000e-74 289.0
21 TraesCS3D01G283800 chr3B 93.333 120 8 0 3150 3269 511073747 511073628 1.500000e-40 178.0
22 TraesCS3D01G283800 chr3B 84.615 156 11 3 2993 3147 511073541 511073398 5.470000e-30 143.0
23 TraesCS3D01G283800 chr3B 95.181 83 3 1 2275 2357 511074484 511074565 4.260000e-26 130.0
24 TraesCS3D01G283800 chr3B 82.609 115 1 3 4464 4578 511072150 511072055 3.360000e-12 84.2
25 TraesCS3D01G283800 chr3B 93.878 49 3 0 618 666 511077101 511077053 2.020000e-09 75.0
26 TraesCS3D01G283800 chr3B 90.566 53 2 1 2581 2630 511074129 511074077 3.390000e-07 67.6
27 TraesCS3D01G283800 chr4B 80.496 605 106 7 18 618 83308319 83307723 2.230000e-123 453.0
28 TraesCS3D01G283800 chr4B 89.873 79 5 3 4574 4652 504163105 504163030 1.200000e-16 99.0
29 TraesCS3D01G283800 chr4A 79.193 644 109 9 1 619 429251815 429251172 1.750000e-114 424.0
30 TraesCS3D01G283800 chr4A 88.095 84 4 5 4639 4717 513061309 513061391 1.550000e-15 95.3
31 TraesCS3D01G283800 chr6A 79.618 628 96 15 1 599 140541841 140542465 6.280000e-114 422.0
32 TraesCS3D01G283800 chr4D 79.321 619 107 9 21 618 56726399 56725781 1.050000e-111 414.0
33 TraesCS3D01G283800 chr4D 77.932 648 106 13 5 619 132917704 132918347 2.310000e-98 370.0
34 TraesCS3D01G283800 chr7D 77.572 593 99 18 38 617 488697907 488697336 1.410000e-85 327.0
35 TraesCS3D01G283800 chr7D 80.769 312 46 10 39 348 494896286 494895987 1.140000e-56 231.0
36 TraesCS3D01G283800 chr7D 90.909 77 2 5 4649 4722 632075331 632075257 1.200000e-16 99.0
37 TraesCS3D01G283800 chr5A 78.471 497 84 13 1 477 244765508 244765015 2.370000e-78 303.0
38 TraesCS3D01G283800 chr2A 80.732 410 56 10 21 408 676376309 676375901 1.100000e-76 298.0
39 TraesCS3D01G283800 chr2A 88.750 80 6 3 4644 4721 608038660 608038582 1.550000e-15 95.3
40 TraesCS3D01G283800 chr1A 81.053 380 53 13 1 365 261246199 261246574 8.590000e-73 285.0
41 TraesCS3D01G283800 chr1A 95.833 48 2 0 5190 5237 535445784 535445737 1.570000e-10 78.7
42 TraesCS3D01G283800 chr7B 85.906 149 7 11 4575 4713 526430730 526430874 4.230000e-31 147.0
43 TraesCS3D01G283800 chr7B 81.690 142 16 9 4576 4713 643351147 643351282 5.550000e-20 110.0
44 TraesCS3D01G283800 chr6B 82.517 143 17 7 4575 4713 718774480 718774618 9.220000e-23 119.0
45 TraesCS3D01G283800 chr6B 90.000 80 4 3 4568 4646 117589864 117589788 3.340000e-17 100.0
46 TraesCS3D01G283800 chr5D 80.556 144 17 9 4574 4714 26924002 26923867 3.340000e-17 100.0
47 TraesCS3D01G283800 chr5D 90.000 80 5 1 4573 4652 203315227 203315151 3.340000e-17 100.0
48 TraesCS3D01G283800 chr5D 89.873 79 5 3 4574 4652 296949521 296949446 1.200000e-16 99.0
49 TraesCS3D01G283800 chr5B 79.866 149 17 11 4574 4713 271942006 271941862 4.320000e-16 97.1
50 TraesCS3D01G283800 chr1D 83.158 95 15 1 411 504 390397796 390397890 9.350000e-13 86.1
51 TraesCS3D01G283800 chr1D 97.917 48 1 0 5190 5237 439305983 439305936 3.360000e-12 84.2
52 TraesCS3D01G283800 chr1B 80.000 120 18 5 4598 4716 209993986 209993872 3.360000e-12 84.2
53 TraesCS3D01G283800 chr1B 97.917 48 1 0 5190 5237 596039066 596039019 3.360000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G283800 chr3D 392054751 392059992 5241 True 3345.666667 9681 92.841333 1 5242 3 chr3D.!!$R3 5241
1 TraesCS3D01G283800 chr3D 291755614 291756243 629 False 379.000000 379 78.404000 3 611 1 chr3D.!!$F2 608
2 TraesCS3D01G283800 chr3D 295266095 295266731 636 True 372.000000 372 78.086000 1 618 1 chr3D.!!$R2 617
3 TraesCS3D01G283800 chr3D 105107820 105108430 610 False 257.000000 257 75.080000 1 597 1 chr3D.!!$F1 596
4 TraesCS3D01G283800 chr3A 512308373 512313632 5259 True 782.475000 2462 88.750750 1 5242 8 chr3A.!!$R1 5241
5 TraesCS3D01G283800 chr3B 511071508 511077101 5593 True 583.436364 2058 90.934727 618 5242 11 chr3B.!!$R1 4624
6 TraesCS3D01G283800 chr4B 83307723 83308319 596 True 453.000000 453 80.496000 18 618 1 chr4B.!!$R1 600
7 TraesCS3D01G283800 chr4A 429251172 429251815 643 True 424.000000 424 79.193000 1 619 1 chr4A.!!$R1 618
8 TraesCS3D01G283800 chr6A 140541841 140542465 624 False 422.000000 422 79.618000 1 599 1 chr6A.!!$F1 598
9 TraesCS3D01G283800 chr4D 56725781 56726399 618 True 414.000000 414 79.321000 21 618 1 chr4D.!!$R1 597
10 TraesCS3D01G283800 chr4D 132917704 132918347 643 False 370.000000 370 77.932000 5 619 1 chr4D.!!$F1 614
11 TraesCS3D01G283800 chr7D 488697336 488697907 571 True 327.000000 327 77.572000 38 617 1 chr7D.!!$R1 579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
238 246 0.468226 TTCTTCTTGGGCGACACTGT 59.532 50.000 0.0 0.0 0.00 3.55 F
836 1829 0.552367 TCATCCCCACCACCATCCTT 60.552 55.000 0.0 0.0 0.00 3.36 F
1168 2169 0.523519 TGAACTGTTTGTTGCGTGCA 59.476 45.000 0.0 0.0 39.30 4.57 F
1281 2290 2.286294 CCTGAAGATTACTGCGATGCAC 59.714 50.000 0.0 0.0 33.79 4.57 F
1643 2673 2.907634 TGGCATTACGCTCGGATTTTA 58.092 42.857 0.0 0.0 41.91 1.52 F
3457 4717 1.071471 CAGGCGGAGTGGTTTCTGT 59.929 57.895 0.0 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1084 2078 0.179119 ACCGAATAGGCACAGCGTAC 60.179 55.000 0.00 0.0 46.52 3.67 R
2318 3358 2.028020 TCCGGAAGAAGAGAGCTTTTCC 60.028 50.000 0.00 0.0 37.62 3.13 R
2437 3478 2.361757 TGCACAAAGGAAATGGACAGTG 59.638 45.455 0.00 0.0 0.00 3.66 R
2718 3897 5.238006 TCCGTTTTACAAAAAGGTGTCAG 57.762 39.130 15.83 0.0 44.50 3.51 R
3496 4757 2.398588 CCTTCACCAGCTACATCCCTA 58.601 52.381 0.00 0.0 0.00 3.53 R
5137 6864 0.461339 AAAGTCAGTCACCACGCGTT 60.461 50.000 10.22 0.0 0.00 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 0.929734 TAGGTAGACCAGGGCCTCCT 60.930 60.000 0.95 8.99 46.26 3.69
111 112 1.598130 GTTTCCTCCTGCTGTGCGT 60.598 57.895 0.00 0.00 0.00 5.24
232 240 1.672356 GCTGCTTCTTCTTGGGCGA 60.672 57.895 0.00 0.00 0.00 5.54
238 246 0.468226 TTCTTCTTGGGCGACACTGT 59.532 50.000 0.00 0.00 0.00 3.55
280 298 2.747855 GCCTTTGGCGGAGGTGAG 60.748 66.667 7.66 0.00 39.62 3.51
282 300 2.747855 CTTTGGCGGAGGTGAGGC 60.748 66.667 0.00 0.00 0.00 4.70
283 301 3.249189 TTTGGCGGAGGTGAGGCT 61.249 61.111 0.00 0.00 0.00 4.58
287 305 4.459089 GCGGAGGTGAGGCTGGAC 62.459 72.222 0.00 0.00 0.00 4.02
288 306 4.135153 CGGAGGTGAGGCTGGACG 62.135 72.222 0.00 0.00 0.00 4.79
289 307 2.680352 GGAGGTGAGGCTGGACGA 60.680 66.667 0.00 0.00 0.00 4.20
290 308 2.716017 GGAGGTGAGGCTGGACGAG 61.716 68.421 0.00 0.00 0.00 4.18
291 309 2.681778 AGGTGAGGCTGGACGAGG 60.682 66.667 0.00 0.00 0.00 4.63
409 460 3.343421 GTCGTTGTGCCACCGACC 61.343 66.667 13.50 0.00 43.77 4.79
479 562 4.201871 ACGCAAACGAGACTCAAATTTGAA 60.202 37.500 20.82 6.29 43.93 2.69
499 582 2.190841 CGAAAACGGGTTGGCAGGT 61.191 57.895 0.00 0.00 0.00 4.00
512 595 1.133637 TGGCAGGTGGACAAAAAGCTA 60.134 47.619 0.00 0.00 0.00 3.32
592 675 1.463056 GAACACGTGCGGATGAAATGA 59.537 47.619 17.22 0.00 0.00 2.57
600 683 0.933097 CGGATGAAATGAGTCGGCAG 59.067 55.000 0.00 0.00 0.00 4.85
611 694 1.218316 GTCGGCAGGTAGGAGTTGG 59.782 63.158 0.00 0.00 0.00 3.77
614 697 1.541310 CGGCAGGTAGGAGTTGGTCA 61.541 60.000 0.00 0.00 0.00 4.02
773 1766 1.638589 CTCCCCCACAAATTGGTCCTA 59.361 52.381 0.00 0.00 45.25 2.94
815 1808 0.820891 GTCCGGCTATCCTCGTGGTA 60.821 60.000 0.00 0.00 34.23 3.25
820 1813 2.240279 GGCTATCCTCGTGGTACTCAT 58.760 52.381 2.99 0.00 34.23 2.90
836 1829 0.552367 TCATCCCCACCACCATCCTT 60.552 55.000 0.00 0.00 0.00 3.36
868 1861 3.151022 GCTAGAGCGGCTCCACCT 61.151 66.667 25.49 10.37 35.61 4.00
869 1862 3.124686 CTAGAGCGGCTCCACCTC 58.875 66.667 25.49 1.16 35.61 3.85
905 1898 3.450115 CCACCTCCGACCCGTCTC 61.450 72.222 0.00 0.00 0.00 3.36
911 1904 2.829458 CCGACCCGTCTCCTCCTC 60.829 72.222 0.00 0.00 0.00 3.71
912 1905 2.829458 CGACCCGTCTCCTCCTCC 60.829 72.222 0.00 0.00 0.00 4.30
913 1906 2.684735 GACCCGTCTCCTCCTCCT 59.315 66.667 0.00 0.00 0.00 3.69
914 1907 1.454295 GACCCGTCTCCTCCTCCTC 60.454 68.421 0.00 0.00 0.00 3.71
915 1908 2.123640 CCCGTCTCCTCCTCCTCC 60.124 72.222 0.00 0.00 0.00 4.30
916 1909 2.684104 CCGTCTCCTCCTCCTCCA 59.316 66.667 0.00 0.00 0.00 3.86
976 1969 2.731374 CTCGCCTTCTCCGGATCC 59.269 66.667 3.57 0.00 0.00 3.36
1064 2058 2.040178 CAAGCGAGGTAGGTCCCTATT 58.960 52.381 0.00 0.00 34.03 1.73
1077 2071 3.053170 GGTCCCTATTACACACCCCAATT 60.053 47.826 0.00 0.00 0.00 2.32
1084 2078 2.998316 ACACACCCCAATTTTGTTGG 57.002 45.000 0.00 0.00 39.25 3.77
1123 2117 3.316868 GGTTCATTTCCTCAACGAAACCA 59.683 43.478 0.00 0.00 34.68 3.67
1168 2169 0.523519 TGAACTGTTTGTTGCGTGCA 59.476 45.000 0.00 0.00 39.30 4.57
1200 2201 2.967201 TGGAAGAGGTCAACGTAGGAAA 59.033 45.455 0.00 0.00 0.00 3.13
1201 2202 3.243975 TGGAAGAGGTCAACGTAGGAAAC 60.244 47.826 0.00 0.00 0.00 2.78
1202 2203 7.244551 CTGGAAGAGGTCAACGTAGGAAACT 62.245 48.000 0.00 0.00 40.38 2.66
1203 2204 4.219288 GGAAGAGGTCAACGTAGGAAACTA 59.781 45.833 0.00 0.00 43.67 2.24
1204 2205 5.388408 AAGAGGTCAACGTAGGAAACTAG 57.612 43.478 0.00 0.00 45.49 2.57
1252 2256 3.809832 GTGTGAAGAACTTAGCTTGCTCA 59.190 43.478 0.00 0.00 0.00 4.26
1271 2280 5.195001 CTCACTAGGAGCCTGAAGATTAC 57.805 47.826 0.00 0.00 36.69 1.89
1281 2290 2.286294 CCTGAAGATTACTGCGATGCAC 59.714 50.000 0.00 0.00 33.79 4.57
1299 2308 3.131933 TGCACTGCACACAAGGTTATTTT 59.868 39.130 0.00 0.00 31.71 1.82
1519 2548 6.916909 TCTATATAAAGGGAAAATGGTGCCA 58.083 36.000 0.00 0.00 0.00 4.92
1603 2633 4.836125 TCTGAACAACTCTTTTGGCATC 57.164 40.909 0.00 0.00 0.00 3.91
1605 2635 4.889409 TCTGAACAACTCTTTTGGCATCTT 59.111 37.500 0.00 0.00 0.00 2.40
1622 2652 5.163195 GGCATCTTTAACCCCTTATCTCTGA 60.163 44.000 0.00 0.00 0.00 3.27
1634 2664 4.562347 CCTTATCTCTGATGGCATTACGCT 60.562 45.833 0.00 0.00 41.91 5.07
1643 2673 2.907634 TGGCATTACGCTCGGATTTTA 58.092 42.857 0.00 0.00 41.91 1.52
1995 3035 3.684305 GCCTGGCACCAAAAATGTTATTC 59.316 43.478 15.17 0.00 0.00 1.75
2035 3075 3.988379 TGCAAAGAAGGTGACATGTTC 57.012 42.857 0.00 0.00 0.00 3.18
2039 3079 4.202050 GCAAAGAAGGTGACATGTTCAGTT 60.202 41.667 0.00 0.00 33.71 3.16
2226 3266 3.981071 AGGTTATGTGCTGCAGTAGAA 57.019 42.857 16.64 2.27 0.00 2.10
2307 3347 5.280945 TCTTCCTTGTTTCGAGCAAAAATG 58.719 37.500 6.09 1.68 0.00 2.32
2318 3358 8.420189 GTTTCGAGCAAAAATGAATAAAGTCAG 58.580 33.333 0.00 0.00 0.00 3.51
2400 3440 7.731054 ACTTAGAATCTTCCTGATGTATGGTC 58.269 38.462 0.00 0.00 35.21 4.02
2404 3444 8.503428 AGAATCTTCCTGATGTATGGTCTAAT 57.497 34.615 0.00 0.00 35.21 1.73
2405 3445 8.592809 AGAATCTTCCTGATGTATGGTCTAATC 58.407 37.037 0.00 0.00 35.21 1.75
2407 3447 6.385443 TCTTCCTGATGTATGGTCTAATCCT 58.615 40.000 0.00 0.00 0.00 3.24
2410 3450 6.830912 TCCTGATGTATGGTCTAATCCTTTG 58.169 40.000 0.00 0.00 0.00 2.77
2664 3843 9.710900 GATGGAAATTTGATAACCTGTTTTCTT 57.289 29.630 0.00 0.00 0.00 2.52
2744 3923 6.028146 ACACCTTTTTGTAAAACGGAACTT 57.972 33.333 16.56 0.00 39.03 2.66
2973 4152 6.986817 GGTATGTAACTGCAGTCATGTAGAAT 59.013 38.462 24.18 8.80 41.30 2.40
2977 4156 7.836842 TGTAACTGCAGTCATGTAGAATCTAA 58.163 34.615 21.95 0.00 41.30 2.10
2981 4160 6.154203 TGCAGTCATGTAGAATCTAAGAGG 57.846 41.667 0.00 0.00 0.00 3.69
3050 4239 5.824429 ACTGTTCATTGTCATTTGTCTGTG 58.176 37.500 0.00 0.00 0.00 3.66
3095 4284 7.846644 ATATCAGCTGCTATCTTTTCTATGC 57.153 36.000 9.47 0.00 0.00 3.14
3227 4479 6.136857 AGTCTAGTGTAGCAGGGAATATCAA 58.863 40.000 0.00 0.00 0.00 2.57
3240 4492 7.646314 CAGGGAATATCAACTGCTATCTTTTG 58.354 38.462 0.00 0.00 0.00 2.44
3300 4560 7.706159 TGAAATCCATTTATTCATGACTTCCG 58.294 34.615 0.00 0.00 0.00 4.30
3457 4717 1.071471 CAGGCGGAGTGGTTTCTGT 59.929 57.895 0.00 0.00 0.00 3.41
3496 4757 2.069273 GTATGCGTTCTGTCTGCACTT 58.931 47.619 0.00 0.00 42.11 3.16
3542 4803 6.697892 GTGTCTATGGACTAGCTAATCACAAC 59.302 42.308 10.82 0.00 42.54 3.32
3651 5039 8.017373 CCATAATGCTATCCACGAAATAACAAG 58.983 37.037 0.00 0.00 0.00 3.16
3673 5061 6.428385 AGGATTTCTAATTTTGAGCAGTCG 57.572 37.500 0.00 0.00 0.00 4.18
3712 5100 2.093816 TCTGCTGACTTCATGCGATTCT 60.094 45.455 0.00 0.00 0.00 2.40
3784 5172 0.984961 TGAAGCTCAGAGGGGATGGG 60.985 60.000 0.00 0.00 0.00 4.00
3814 5202 7.276658 ACCTACATATCTACTGTACGTATACGC 59.723 40.741 24.64 10.35 44.43 4.42
3832 5220 7.529519 CGTATACGCCTAGCAAAAATAATGAAC 59.470 37.037 13.08 0.00 0.00 3.18
3833 5221 5.897377 ACGCCTAGCAAAAATAATGAACT 57.103 34.783 0.00 0.00 0.00 3.01
3949 5337 2.639286 GTGGCAGGCTTTCGTGTG 59.361 61.111 0.00 0.00 0.00 3.82
3992 5380 5.586643 GCGAATCCTGAAGGTAATTTCTCTT 59.413 40.000 0.00 0.00 36.34 2.85
4044 5592 7.648142 TCATGATAAAACACCACTCTGTTTTC 58.352 34.615 12.12 2.51 46.68 2.29
4245 5793 2.094894 GCGATGAGGTCACTGTGATTTG 59.905 50.000 14.37 2.87 0.00 2.32
4250 5798 0.523072 GGTCACTGTGATTTGCGCAT 59.477 50.000 12.75 0.00 36.23 4.73
4271 5820 3.691049 TTTGTCTTTCGGCTTTCACAG 57.309 42.857 0.00 0.00 0.00 3.66
4303 5855 1.134946 CTGGGCCTAAAATTCCAAGCG 59.865 52.381 4.53 0.00 0.00 4.68
4326 5883 0.106268 TCCTTCCAGTTTGCTTGCCA 60.106 50.000 0.00 0.00 0.00 4.92
4328 5885 1.538849 CCTTCCAGTTTGCTTGCCAAC 60.539 52.381 1.91 1.91 31.97 3.77
4395 5952 0.308068 ACGGCGATAGATGAGTGTCG 59.692 55.000 16.62 0.00 39.76 4.35
4430 5987 5.077134 AGTACTACCGGTAAAACCATCAC 57.923 43.478 16.65 4.89 38.47 3.06
4442 5999 0.036732 ACCATCACACCGCAGATTGT 59.963 50.000 0.00 0.00 0.00 2.71
4444 6001 0.371301 CATCACACCGCAGATTGTCG 59.629 55.000 0.00 0.00 0.00 4.35
4446 6003 0.666274 TCACACCGCAGATTGTCGAC 60.666 55.000 9.11 9.11 0.00 4.20
4450 6007 1.251527 ACCGCAGATTGTCGACTCCT 61.252 55.000 17.92 8.02 0.00 3.69
4464 6021 2.216898 GACTCCTGCATCCATTGTAGC 58.783 52.381 0.00 0.00 36.79 3.58
4465 6022 1.561076 ACTCCTGCATCCATTGTAGCA 59.439 47.619 0.00 0.00 36.79 3.49
4466 6023 2.174210 ACTCCTGCATCCATTGTAGCAT 59.826 45.455 0.00 0.00 36.79 3.79
4467 6024 2.552743 CTCCTGCATCCATTGTAGCATG 59.447 50.000 0.00 0.00 36.79 4.06
4511 6071 5.940470 AGAGCAGTAACCTTGGAAATAGTTG 59.060 40.000 0.00 0.00 0.00 3.16
4514 6074 5.390567 GCAGTAACCTTGGAAATAGTTGTCG 60.391 44.000 0.00 0.00 0.00 4.35
4515 6075 5.121768 CAGTAACCTTGGAAATAGTTGTCGG 59.878 44.000 0.00 0.00 0.00 4.79
4521 6081 3.071479 TGGAAATAGTTGTCGGTTCAGC 58.929 45.455 0.00 0.00 0.00 4.26
4548 6108 9.387257 GCCATTGAATAAAGATTTTTCCTTCAT 57.613 29.630 7.19 0.00 32.60 2.57
4574 6134 1.066136 GACCTTTTCGTGCTACCGTC 58.934 55.000 0.00 0.00 0.00 4.79
4575 6135 0.677842 ACCTTTTCGTGCTACCGTCT 59.322 50.000 0.00 0.00 0.00 4.18
4576 6136 1.888512 ACCTTTTCGTGCTACCGTCTA 59.111 47.619 0.00 0.00 0.00 2.59
4578 6138 2.094854 CCTTTTCGTGCTACCGTCTACT 60.095 50.000 0.00 0.00 0.00 2.57
4579 6139 2.907910 TTTCGTGCTACCGTCTACTC 57.092 50.000 0.00 0.00 0.00 2.59
4581 6141 0.745845 TCGTGCTACCGTCTACTCCC 60.746 60.000 0.00 0.00 0.00 4.30
4582 6142 0.747283 CGTGCTACCGTCTACTCCCT 60.747 60.000 0.00 0.00 0.00 4.20
4583 6143 1.023502 GTGCTACCGTCTACTCCCTC 58.976 60.000 0.00 0.00 0.00 4.30
4584 6144 0.106819 TGCTACCGTCTACTCCCTCC 60.107 60.000 0.00 0.00 0.00 4.30
4585 6145 1.165284 GCTACCGTCTACTCCCTCCG 61.165 65.000 0.00 0.00 0.00 4.63
4586 6146 0.179936 CTACCGTCTACTCCCTCCGT 59.820 60.000 0.00 0.00 0.00 4.69
4587 6147 0.620556 TACCGTCTACTCCCTCCGTT 59.379 55.000 0.00 0.00 0.00 4.44
4588 6148 0.679321 ACCGTCTACTCCCTCCGTTC 60.679 60.000 0.00 0.00 0.00 3.95
4589 6149 1.382692 CCGTCTACTCCCTCCGTTCC 61.383 65.000 0.00 0.00 0.00 3.62
4590 6150 1.712977 CGTCTACTCCCTCCGTTCCG 61.713 65.000 0.00 0.00 0.00 4.30
4591 6151 0.393537 GTCTACTCCCTCCGTTCCGA 60.394 60.000 0.00 0.00 0.00 4.55
4592 6152 0.329261 TCTACTCCCTCCGTTCCGAA 59.671 55.000 0.00 0.00 0.00 4.30
4593 6153 1.180029 CTACTCCCTCCGTTCCGAAA 58.820 55.000 0.00 0.00 0.00 3.46
4594 6154 1.755380 CTACTCCCTCCGTTCCGAAAT 59.245 52.381 0.00 0.00 0.00 2.17
4595 6155 1.856629 ACTCCCTCCGTTCCGAAATA 58.143 50.000 0.00 0.00 0.00 1.40
4596 6156 1.755380 ACTCCCTCCGTTCCGAAATAG 59.245 52.381 0.00 0.00 0.00 1.73
4597 6157 1.755380 CTCCCTCCGTTCCGAAATAGT 59.245 52.381 0.00 0.00 0.00 2.12
4598 6158 2.954318 CTCCCTCCGTTCCGAAATAGTA 59.046 50.000 0.00 0.00 0.00 1.82
4599 6159 3.569491 TCCCTCCGTTCCGAAATAGTAT 58.431 45.455 0.00 0.00 0.00 2.12
4600 6160 4.728772 TCCCTCCGTTCCGAAATAGTATA 58.271 43.478 0.00 0.00 0.00 1.47
4601 6161 5.139727 TCCCTCCGTTCCGAAATAGTATAA 58.860 41.667 0.00 0.00 0.00 0.98
4602 6162 5.242393 TCCCTCCGTTCCGAAATAGTATAAG 59.758 44.000 0.00 0.00 0.00 1.73
4603 6163 5.010415 CCCTCCGTTCCGAAATAGTATAAGT 59.990 44.000 0.00 0.00 0.00 2.24
4604 6164 6.148264 CCTCCGTTCCGAAATAGTATAAGTC 58.852 44.000 0.00 0.00 0.00 3.01
4605 6165 6.016443 CCTCCGTTCCGAAATAGTATAAGTCT 60.016 42.308 0.00 0.00 0.00 3.24
4606 6166 7.338800 TCCGTTCCGAAATAGTATAAGTCTT 57.661 36.000 0.00 0.00 0.00 3.01
4607 6167 7.420800 TCCGTTCCGAAATAGTATAAGTCTTC 58.579 38.462 0.00 0.00 0.00 2.87
4608 6168 6.359087 CCGTTCCGAAATAGTATAAGTCTTCG 59.641 42.308 6.85 6.85 36.36 3.79
4609 6169 6.909357 CGTTCCGAAATAGTATAAGTCTTCGT 59.091 38.462 11.14 0.00 35.17 3.85
4610 6170 8.064222 CGTTCCGAAATAGTATAAGTCTTCGTA 58.936 37.037 11.14 0.00 35.17 3.43
4611 6171 9.379811 GTTCCGAAATAGTATAAGTCTTCGTAG 57.620 37.037 11.14 0.00 35.17 3.51
4612 6172 8.893219 TCCGAAATAGTATAAGTCTTCGTAGA 57.107 34.615 11.14 0.00 35.17 2.59
4613 6173 8.986847 TCCGAAATAGTATAAGTCTTCGTAGAG 58.013 37.037 11.14 0.14 38.43 2.43
4614 6174 8.986847 CCGAAATAGTATAAGTCTTCGTAGAGA 58.013 37.037 11.14 0.00 38.43 3.10
4621 6181 9.398538 AGTATAAGTCTTCGTAGAGATTTCACT 57.601 33.333 0.00 0.00 38.43 3.41
4625 6185 7.033530 AGTCTTCGTAGAGATTTCACTATGG 57.966 40.000 0.00 0.00 38.43 2.74
4626 6186 6.829298 AGTCTTCGTAGAGATTTCACTATGGA 59.171 38.462 0.00 0.00 38.43 3.41
4627 6187 6.913673 GTCTTCGTAGAGATTTCACTATGGAC 59.086 42.308 0.00 2.91 38.43 4.02
4628 6188 6.829298 TCTTCGTAGAGATTTCACTATGGACT 59.171 38.462 4.96 0.00 38.43 3.85
4629 6189 7.991460 TCTTCGTAGAGATTTCACTATGGACTA 59.009 37.037 4.96 0.00 38.43 2.59
4630 6190 7.493743 TCGTAGAGATTTCACTATGGACTAC 57.506 40.000 0.00 0.00 30.34 2.73
4631 6191 7.052248 TCGTAGAGATTTCACTATGGACTACA 58.948 38.462 0.00 0.00 30.34 2.74
4632 6192 7.720074 TCGTAGAGATTTCACTATGGACTACAT 59.280 37.037 0.00 0.00 43.68 2.29
4633 6193 9.000486 CGTAGAGATTTCACTATGGACTACATA 58.000 37.037 0.00 0.00 41.03 2.29
4635 6195 7.877003 AGAGATTTCACTATGGACTACATACG 58.123 38.462 0.00 0.00 41.03 3.06
4636 6196 6.982852 AGATTTCACTATGGACTACATACGG 58.017 40.000 0.00 0.00 41.03 4.02
4637 6197 6.776116 AGATTTCACTATGGACTACATACGGA 59.224 38.462 0.00 0.00 41.03 4.69
4638 6198 5.762825 TTCACTATGGACTACATACGGAC 57.237 43.478 0.00 0.00 41.03 4.79
4639 6199 4.139786 TCACTATGGACTACATACGGACC 58.860 47.826 0.00 0.00 41.03 4.46
4640 6200 3.887110 CACTATGGACTACATACGGACCA 59.113 47.826 0.00 0.00 41.03 4.02
4641 6201 4.340097 CACTATGGACTACATACGGACCAA 59.660 45.833 0.00 0.00 41.03 3.67
4642 6202 4.957954 ACTATGGACTACATACGGACCAAA 59.042 41.667 0.00 0.00 41.03 3.28
4643 6203 4.829872 ATGGACTACATACGGACCAAAA 57.170 40.909 0.00 0.00 38.26 2.44
4644 6204 4.829872 TGGACTACATACGGACCAAAAT 57.170 40.909 0.00 0.00 0.00 1.82
4645 6205 4.509616 TGGACTACATACGGACCAAAATG 58.490 43.478 0.00 0.00 0.00 2.32
4646 6206 4.020039 TGGACTACATACGGACCAAAATGT 60.020 41.667 8.07 8.07 36.56 2.71
4647 6207 4.331717 GGACTACATACGGACCAAAATGTG 59.668 45.833 11.69 6.32 34.54 3.21
4648 6208 4.901868 ACTACATACGGACCAAAATGTGT 58.098 39.130 11.69 6.77 34.54 3.72
4649 6209 6.040209 ACTACATACGGACCAAAATGTGTA 57.960 37.500 11.69 3.66 34.54 2.90
4650 6210 6.465948 ACTACATACGGACCAAAATGTGTAA 58.534 36.000 11.69 0.00 34.54 2.41
4651 6211 6.935771 ACTACATACGGACCAAAATGTGTAAA 59.064 34.615 11.69 0.00 34.54 2.01
4652 6212 6.004408 ACATACGGACCAAAATGTGTAAAC 57.996 37.500 3.25 0.00 31.56 2.01
4653 6213 5.531659 ACATACGGACCAAAATGTGTAAACA 59.468 36.000 3.25 0.00 31.56 2.83
4654 6214 6.207810 ACATACGGACCAAAATGTGTAAACAT 59.792 34.615 0.00 0.00 31.56 2.71
4655 6215 5.116069 ACGGACCAAAATGTGTAAACATC 57.884 39.130 0.00 0.00 0.00 3.06
4656 6216 4.022676 ACGGACCAAAATGTGTAAACATCC 60.023 41.667 0.00 0.00 0.00 3.51
4657 6217 4.217550 CGGACCAAAATGTGTAAACATCCT 59.782 41.667 0.00 0.00 0.00 3.24
4658 6218 5.413213 CGGACCAAAATGTGTAAACATCCTA 59.587 40.000 0.00 0.00 0.00 2.94
4659 6219 6.403200 CGGACCAAAATGTGTAAACATCCTAG 60.403 42.308 0.00 0.00 0.00 3.02
4660 6220 6.433093 GGACCAAAATGTGTAAACATCCTAGT 59.567 38.462 0.00 0.00 0.00 2.57
4661 6221 7.214467 ACCAAAATGTGTAAACATCCTAGTG 57.786 36.000 0.00 0.00 0.00 2.74
4662 6222 6.775629 ACCAAAATGTGTAAACATCCTAGTGT 59.224 34.615 0.00 0.00 0.00 3.55
4663 6223 7.083858 CCAAAATGTGTAAACATCCTAGTGTG 58.916 38.462 0.00 0.00 31.49 3.82
4664 6224 6.817765 AAATGTGTAAACATCCTAGTGTGG 57.182 37.500 0.00 0.00 31.49 4.17
4665 6225 4.967084 TGTGTAAACATCCTAGTGTGGT 57.033 40.909 0.00 0.00 31.49 4.16
4666 6226 4.637276 TGTGTAAACATCCTAGTGTGGTG 58.363 43.478 0.00 0.00 31.49 4.17
4667 6227 3.435671 GTGTAAACATCCTAGTGTGGTGC 59.564 47.826 0.00 0.00 31.49 5.01
4668 6228 2.949177 AAACATCCTAGTGTGGTGCA 57.051 45.000 0.00 0.00 31.49 4.57
4669 6229 3.439857 AAACATCCTAGTGTGGTGCAT 57.560 42.857 0.00 0.00 31.49 3.96
4670 6230 4.568072 AAACATCCTAGTGTGGTGCATA 57.432 40.909 0.00 0.00 31.49 3.14
4671 6231 3.827008 ACATCCTAGTGTGGTGCATAG 57.173 47.619 0.00 0.00 0.00 2.23
4672 6232 3.107601 ACATCCTAGTGTGGTGCATAGT 58.892 45.455 0.00 0.00 0.00 2.12
4673 6233 3.118629 ACATCCTAGTGTGGTGCATAGTG 60.119 47.826 0.00 0.00 0.00 2.74
4674 6234 2.815158 TCCTAGTGTGGTGCATAGTGA 58.185 47.619 0.00 0.00 0.00 3.41
4675 6235 3.169908 TCCTAGTGTGGTGCATAGTGAA 58.830 45.455 0.00 0.00 0.00 3.18
4676 6236 3.580895 TCCTAGTGTGGTGCATAGTGAAA 59.419 43.478 0.00 0.00 0.00 2.69
4677 6237 4.225042 TCCTAGTGTGGTGCATAGTGAAAT 59.775 41.667 0.00 0.00 0.00 2.17
4678 6238 4.572389 CCTAGTGTGGTGCATAGTGAAATC 59.428 45.833 0.00 0.00 0.00 2.17
4679 6239 4.292186 AGTGTGGTGCATAGTGAAATCT 57.708 40.909 0.00 0.00 0.00 2.40
4680 6240 4.256920 AGTGTGGTGCATAGTGAAATCTC 58.743 43.478 0.00 0.00 0.00 2.75
4681 6241 4.019860 AGTGTGGTGCATAGTGAAATCTCT 60.020 41.667 0.00 0.00 0.00 3.10
4682 6242 5.187772 AGTGTGGTGCATAGTGAAATCTCTA 59.812 40.000 0.00 0.00 0.00 2.43
4683 6243 6.051717 GTGTGGTGCATAGTGAAATCTCTAT 58.948 40.000 0.00 0.37 34.17 1.98
4684 6244 7.069950 AGTGTGGTGCATAGTGAAATCTCTATA 59.930 37.037 0.00 0.00 33.04 1.31
4685 6245 7.710907 GTGTGGTGCATAGTGAAATCTCTATAA 59.289 37.037 0.00 0.00 33.04 0.98
4686 6246 7.928167 TGTGGTGCATAGTGAAATCTCTATAAG 59.072 37.037 0.00 0.00 33.04 1.73
4687 6247 8.144478 GTGGTGCATAGTGAAATCTCTATAAGA 58.856 37.037 0.00 0.00 38.72 2.10
4688 6248 8.144478 TGGTGCATAGTGAAATCTCTATAAGAC 58.856 37.037 0.00 3.46 36.65 3.01
4689 6249 8.364142 GGTGCATAGTGAAATCTCTATAAGACT 58.636 37.037 0.00 0.00 36.65 3.24
4690 6250 9.757227 GTGCATAGTGAAATCTCTATAAGACTT 57.243 33.333 0.00 0.00 36.65 3.01
4708 6268 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
4721 6281 4.506979 GGAACGGAGGGAGTAGATGATAGA 60.507 50.000 0.00 0.00 0.00 1.98
4731 6291 6.380846 GGGAGTAGATGATAGATGCTCATTCT 59.619 42.308 0.00 0.00 33.56 2.40
4732 6292 7.259882 GGAGTAGATGATAGATGCTCATTCTG 58.740 42.308 0.00 0.00 33.56 3.02
4747 6307 4.460263 TCATTCTGTACAAACTGTTGCCT 58.540 39.130 0.00 0.00 38.39 4.75
4940 6518 1.645710 ACTTCTCCGGACAAGGATGT 58.354 50.000 21.64 12.89 44.25 3.06
4941 6519 1.978580 ACTTCTCCGGACAAGGATGTT 59.021 47.619 21.64 0.00 40.74 2.71
4955 6535 5.303333 ACAAGGATGTTAAAATGGACGGTTT 59.697 36.000 0.00 0.00 35.91 3.27
4977 6557 8.973378 GGTTTAATCTGAAGAATCTCATACTCG 58.027 37.037 0.00 0.00 0.00 4.18
4978 6558 9.522804 GTTTAATCTGAAGAATCTCATACTCGT 57.477 33.333 0.00 0.00 0.00 4.18
4990 6708 5.861725 TCTCATACTCGTAGTACAAACGTG 58.138 41.667 17.05 16.72 41.08 4.49
4991 6709 5.639082 TCTCATACTCGTAGTACAAACGTGA 59.361 40.000 21.78 15.58 41.08 4.35
4992 6710 6.147656 TCTCATACTCGTAGTACAAACGTGAA 59.852 38.462 21.78 10.16 41.08 3.18
4993 6711 6.667370 TCATACTCGTAGTACAAACGTGAAA 58.333 36.000 21.78 13.33 41.08 2.69
4994 6712 7.307694 TCATACTCGTAGTACAAACGTGAAAT 58.692 34.615 21.78 14.45 41.08 2.17
4995 6713 7.482743 TCATACTCGTAGTACAAACGTGAAATC 59.517 37.037 21.78 0.00 41.08 2.17
4996 6714 5.522456 ACTCGTAGTACAAACGTGAAATCA 58.478 37.500 21.78 3.92 41.08 2.57
4997 6715 5.400485 ACTCGTAGTACAAACGTGAAATCAC 59.600 40.000 21.78 3.43 41.08 3.06
4998 6716 5.522456 TCGTAGTACAAACGTGAAATCACT 58.478 37.500 17.05 0.00 44.34 3.41
4999 6717 6.667370 TCGTAGTACAAACGTGAAATCACTA 58.333 36.000 17.05 0.00 44.34 2.74
5065 6788 2.827322 TGATTTGCATCAACCAAGGGAG 59.173 45.455 0.00 0.00 36.41 4.30
5084 6811 8.971073 CAAGGGAGACTAATTAATTTGATTGGT 58.029 33.333 15.21 3.11 31.91 3.67
5085 6812 8.525290 AGGGAGACTAATTAATTTGATTGGTG 57.475 34.615 15.21 0.00 29.78 4.17
5088 6815 8.122952 GGAGACTAATTAATTTGATTGGTGACG 58.877 37.037 15.21 0.00 29.78 4.35
5137 6864 1.595929 GGCCAACACCGTCGAGAAA 60.596 57.895 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 2.278330 GCAACAAAGGAGGCCCTGG 61.278 63.158 0.00 0.00 43.48 4.45
232 240 3.991051 CCCGCGAGACCACAGTGT 61.991 66.667 8.23 0.00 0.00 3.55
355 406 1.360393 TGTCCAAAACCCTCCTGGCT 61.360 55.000 0.00 0.00 37.83 4.75
359 410 1.133482 CCACTTGTCCAAAACCCTCCT 60.133 52.381 0.00 0.00 0.00 3.69
499 582 5.181690 GACACACATTAGCTTTTTGTCCA 57.818 39.130 0.00 0.00 0.00 4.02
512 595 2.409975 CGACCTAAACGGACACACATT 58.590 47.619 0.00 0.00 36.31 2.71
554 637 0.600518 TCGTTTGGATCGTTGCGGAA 60.601 50.000 0.00 0.00 0.00 4.30
592 675 1.258445 CCAACTCCTACCTGCCGACT 61.258 60.000 0.00 0.00 0.00 4.18
600 683 4.715713 AGTTTCTTTGACCAACTCCTACC 58.284 43.478 0.00 0.00 0.00 3.18
611 694 3.364068 GCCGCTGTAAGAGTTTCTTTGAC 60.364 47.826 0.00 0.00 37.89 3.18
614 697 2.152016 GGCCGCTGTAAGAGTTTCTTT 58.848 47.619 0.00 0.00 37.89 2.52
784 1777 4.430765 CCGGACGCGTACAGCCTT 62.431 66.667 23.49 0.00 44.76 4.35
796 1789 0.820891 TACCACGAGGATAGCCGGAC 60.821 60.000 5.05 0.00 39.96 4.79
815 1808 1.281925 GGATGGTGGTGGGGATGAGT 61.282 60.000 0.00 0.00 0.00 3.41
820 1813 1.465188 ACAAGGATGGTGGTGGGGA 60.465 57.895 0.00 0.00 0.00 4.81
893 1886 3.336568 AGGAGGAGACGGGTCGGA 61.337 66.667 0.00 0.00 34.09 4.55
895 1888 2.829458 GGAGGAGGAGACGGGTCG 60.829 72.222 0.00 0.00 34.09 4.79
905 1898 0.327000 ACCTGGATTGGAGGAGGAGG 60.327 60.000 0.00 0.00 34.37 4.30
911 1904 1.221840 CGGTGACCTGGATTGGAGG 59.778 63.158 0.00 0.00 36.57 4.30
912 1905 0.108138 GACGGTGACCTGGATTGGAG 60.108 60.000 0.00 0.00 0.00 3.86
913 1906 1.550130 GGACGGTGACCTGGATTGGA 61.550 60.000 0.00 0.00 0.00 3.53
914 1907 1.078426 GGACGGTGACCTGGATTGG 60.078 63.158 0.00 0.00 0.00 3.16
915 1908 1.447838 CGGACGGTGACCTGGATTG 60.448 63.158 0.00 0.00 0.00 2.67
916 1909 2.978824 CGGACGGTGACCTGGATT 59.021 61.111 0.00 0.00 0.00 3.01
1064 2058 3.375699 ACCAACAAAATTGGGGTGTGTA 58.624 40.909 10.32 0.00 43.71 2.90
1077 2071 0.464735 AGGCACAGCGTACCAACAAA 60.465 50.000 1.68 0.00 0.00 2.83
1084 2078 0.179119 ACCGAATAGGCACAGCGTAC 60.179 55.000 0.00 0.00 46.52 3.67
1168 2169 6.238648 CGTTGACCTCTTCCAGTTAACATTTT 60.239 38.462 8.61 0.00 33.42 1.82
1200 2201 4.586841 GTGAGAGTAGGCATGATTCCTAGT 59.413 45.833 0.00 0.00 41.32 2.57
1201 2202 4.586421 TGTGAGAGTAGGCATGATTCCTAG 59.414 45.833 0.00 0.00 36.90 3.02
1202 2203 4.546674 TGTGAGAGTAGGCATGATTCCTA 58.453 43.478 0.00 0.00 35.21 2.94
1203 2204 3.378512 TGTGAGAGTAGGCATGATTCCT 58.621 45.455 0.00 0.00 37.72 3.36
1204 2205 3.827008 TGTGAGAGTAGGCATGATTCC 57.173 47.619 0.00 0.00 0.00 3.01
1205 2206 4.764172 ACTTGTGAGAGTAGGCATGATTC 58.236 43.478 0.00 0.00 0.00 2.52
1206 2207 4.223700 TGACTTGTGAGAGTAGGCATGATT 59.776 41.667 0.00 0.00 0.00 2.57
1207 2208 3.771479 TGACTTGTGAGAGTAGGCATGAT 59.229 43.478 0.00 0.00 0.00 2.45
1252 2256 3.386402 GCAGTAATCTTCAGGCTCCTAGT 59.614 47.826 0.00 0.00 0.00 2.57
1271 2280 2.120355 TTGTGTGCAGTGCATCGCAG 62.120 55.000 22.87 0.00 41.91 5.18
1281 2290 5.914635 CAGTACAAAATAACCTTGTGTGCAG 59.085 40.000 0.00 0.00 37.56 4.41
1299 2308 4.283337 TCCTATCCCAATTCGTCAGTACA 58.717 43.478 0.00 0.00 0.00 2.90
1513 2542 7.588497 ATTAGAGGAGAAAATATTTGGCACC 57.412 36.000 0.39 5.70 0.00 5.01
1519 2548 9.034800 TGTTGCCAATTAGAGGAGAAAATATTT 57.965 29.630 0.00 0.00 0.00 1.40
1603 2633 5.066593 GCCATCAGAGATAAGGGGTTAAAG 58.933 45.833 0.00 0.00 0.00 1.85
1605 2635 4.044308 TGCCATCAGAGATAAGGGGTTAA 58.956 43.478 0.00 0.00 0.00 2.01
1634 2664 9.740239 GTGATGTACTACTGTTATAAAATCCGA 57.260 33.333 0.00 0.00 0.00 4.55
1662 2692 9.184523 TGCATAGGCCCAAAATAATATGTATAC 57.815 33.333 0.00 0.00 40.13 1.47
1669 2699 9.545928 AGATTAATGCATAGGCCCAAAATAATA 57.454 29.630 0.00 0.00 40.13 0.98
1957 2997 3.364549 CCAGGCAGAAATGTTGGGAATA 58.635 45.455 0.00 0.00 0.00 1.75
1995 3035 9.390795 CTTTGCATATTCCGAGAATAAAATGAG 57.609 33.333 9.45 4.23 0.00 2.90
2035 3075 4.825546 AGACAACATTCTTCAGCAACTG 57.174 40.909 0.00 0.00 0.00 3.16
2039 3079 6.936335 TCATCTAAAGACAACATTCTTCAGCA 59.064 34.615 0.00 0.00 34.60 4.41
2169 3209 8.596781 ACACTATCTAAGTACCAGAACTCAAT 57.403 34.615 0.00 0.00 35.76 2.57
2226 3266 6.936900 AGCACAAATGAAGTAGACAGTAATGT 59.063 34.615 0.00 0.00 0.00 2.71
2307 3347 7.606073 AGAAGAGAGCTTTTCCTGACTTTATTC 59.394 37.037 0.00 0.00 33.61 1.75
2318 3358 2.028020 TCCGGAAGAAGAGAGCTTTTCC 60.028 50.000 0.00 0.00 37.62 3.13
2370 3410 7.118496 ACATCAGGAAGATTCTAAGTACCAG 57.882 40.000 0.00 0.00 33.72 4.00
2407 3447 8.301252 TCTACTGTAGCACATATCCTTACAAA 57.699 34.615 9.98 0.00 0.00 2.83
2410 3450 6.016192 TGCTCTACTGTAGCACATATCCTTAC 60.016 42.308 9.98 0.00 44.78 2.34
2437 3478 2.361757 TGCACAAAGGAAATGGACAGTG 59.638 45.455 0.00 0.00 0.00 3.66
2558 3737 7.432252 CGTAAGAAGCAATCCCATGAAAATTAC 59.568 37.037 0.00 0.00 43.02 1.89
2664 3843 6.040278 GTCAGAGAGATAATCATCTGTGGTGA 59.960 42.308 9.58 5.26 41.78 4.02
2718 3897 5.238006 TCCGTTTTACAAAAAGGTGTCAG 57.762 39.130 15.83 0.00 44.50 3.51
2973 4152 8.466617 AGATTAAGCGTATTTCTCCTCTTAGA 57.533 34.615 0.00 0.00 0.00 2.10
2977 4156 6.322712 ACAGAGATTAAGCGTATTTCTCCTCT 59.677 38.462 13.06 0.00 0.00 3.69
2981 4160 9.517609 TTTAGACAGAGATTAAGCGTATTTCTC 57.482 33.333 10.29 10.29 0.00 2.87
3014 4203 5.412594 ACAATGAACAGTACTACAAGGCATG 59.587 40.000 0.00 0.00 0.00 4.06
3050 4239 5.538849 ATTCCCTGCTAAACTAGACTAGC 57.461 43.478 9.52 16.25 40.82 3.42
3227 4479 6.947464 ACCAGTACATACAAAAGATAGCAGT 58.053 36.000 0.00 0.00 0.00 4.40
3240 4492 8.712285 TTCAACTGCTATTAACCAGTACATAC 57.288 34.615 0.00 0.00 41.16 2.39
3257 4509 7.760794 TGGATTTCATGTTTCATATTCAACTGC 59.239 33.333 0.00 0.00 0.00 4.40
3300 4560 5.762218 TGAGCTAGTAAGGAATACGGTCTAC 59.238 44.000 0.00 0.00 39.62 2.59
3457 4717 3.071874 ACCTTCTTTGATCGCATTCCA 57.928 42.857 0.00 0.00 0.00 3.53
3496 4757 2.398588 CCTTCACCAGCTACATCCCTA 58.601 52.381 0.00 0.00 0.00 3.53
3651 5039 5.030936 GCGACTGCTCAAAATTAGAAATCC 58.969 41.667 0.00 0.00 38.39 3.01
3673 5061 7.753132 GTCAGCAGAATAGTATCTACATACTGC 59.247 40.741 0.00 0.00 44.33 4.40
3712 5100 6.915300 CGATGTAACCATCAAACTGAAACAAA 59.085 34.615 3.84 0.00 46.54 2.83
3784 5172 7.727331 ACGTACAGTAGATATGTAGGTTCTC 57.273 40.000 5.81 0.00 45.15 2.87
3874 5262 6.101997 CAGTTCTCTGTGTATATCTGCACAA 58.898 40.000 3.74 0.00 45.58 3.33
3876 5264 5.046529 CCAGTTCTCTGTGTATATCTGCAC 58.953 45.833 0.00 0.00 39.82 4.57
3878 5266 4.100189 ACCCAGTTCTCTGTGTATATCTGC 59.900 45.833 0.00 0.00 39.82 4.26
3902 5290 4.104738 TCTTCCTCTTGTCCAGGTGAATTT 59.895 41.667 0.00 0.00 32.20 1.82
3949 5337 2.176273 CAGCTACCATGAGGCACGC 61.176 63.158 0.00 0.00 39.06 5.34
3992 5380 2.095314 CACATAATTGCCAGTTGCGACA 60.095 45.455 6.90 0.00 45.60 4.35
4044 5592 0.178950 TCGAGAGGGATCTGGATGGG 60.179 60.000 0.00 0.00 0.00 4.00
4245 5793 0.387239 AGCCGAAAGACAAAATGCGC 60.387 50.000 0.00 0.00 0.00 6.09
4250 5798 3.181491 CCTGTGAAAGCCGAAAGACAAAA 60.181 43.478 0.00 0.00 0.00 2.44
4271 5820 4.706842 TTAGGCCCAGAAACATCTATCC 57.293 45.455 0.00 0.00 0.00 2.59
4303 5855 2.866156 GCAAGCAAACTGGAAGGAAAAC 59.134 45.455 0.00 0.00 39.30 2.43
4326 5883 5.946486 AGATTCTCTTTTGTGAAGGAGGTT 58.054 37.500 0.00 0.00 38.95 3.50
4328 5885 5.555017 TGAGATTCTCTTTTGTGAAGGAGG 58.445 41.667 14.54 0.00 38.95 4.30
4395 5952 5.163713 ACCGGTAGTACTCTTCGTTATTGAC 60.164 44.000 4.49 0.00 0.00 3.18
4404 5961 5.391312 TGGTTTTACCGGTAGTACTCTTC 57.609 43.478 15.20 5.13 42.58 2.87
4412 5969 3.004862 GGTGTGATGGTTTTACCGGTAG 58.995 50.000 15.20 0.00 42.58 3.18
4430 5987 1.078759 GGAGTCGACAATCTGCGGTG 61.079 60.000 19.50 0.00 0.00 4.94
4442 5999 0.904649 ACAATGGATGCAGGAGTCGA 59.095 50.000 0.00 0.00 0.00 4.20
4444 6001 2.216898 GCTACAATGGATGCAGGAGTC 58.783 52.381 0.00 0.00 0.00 3.36
4446 6003 2.336945 TGCTACAATGGATGCAGGAG 57.663 50.000 0.00 0.00 0.00 3.69
4450 6007 4.939271 CATTTCATGCTACAATGGATGCA 58.061 39.130 0.00 0.00 39.83 3.96
4464 6021 7.532571 TCTGATACAAAGTGAAGCATTTCATG 58.467 34.615 0.00 0.00 44.62 3.07
4465 6022 7.627939 GCTCTGATACAAAGTGAAGCATTTCAT 60.628 37.037 0.00 0.00 44.62 2.57
4466 6023 6.348786 GCTCTGATACAAAGTGAAGCATTTCA 60.349 38.462 0.00 0.00 40.92 2.69
4467 6024 6.026513 GCTCTGATACAAAGTGAAGCATTTC 58.973 40.000 0.00 0.00 0.00 2.17
4511 6071 1.573829 TTCAATGGCGCTGAACCGAC 61.574 55.000 7.64 0.00 36.59 4.79
4514 6074 3.128589 TCTTTATTCAATGGCGCTGAACC 59.871 43.478 12.16 0.00 35.70 3.62
4515 6075 4.355543 TCTTTATTCAATGGCGCTGAAC 57.644 40.909 12.16 0.00 35.70 3.18
4521 6081 7.545265 TGAAGGAAAAATCTTTATTCAATGGCG 59.455 33.333 0.00 0.00 31.92 5.69
4548 6108 1.202758 AGCACGAAAAGGTCCATGACA 60.203 47.619 0.00 0.00 33.68 3.58
4585 6145 9.379811 CTACGAAGACTTATACTATTTCGGAAC 57.620 37.037 8.92 0.00 41.01 3.62
4586 6146 9.330063 TCTACGAAGACTTATACTATTTCGGAA 57.670 33.333 8.92 0.00 41.01 4.30
4587 6147 8.893219 TCTACGAAGACTTATACTATTTCGGA 57.107 34.615 8.92 0.00 41.01 4.55
4588 6148 8.986847 TCTCTACGAAGACTTATACTATTTCGG 58.013 37.037 8.92 0.00 41.01 4.30
4595 6155 9.398538 AGTGAAATCTCTACGAAGACTTATACT 57.601 33.333 0.00 0.00 0.00 2.12
4599 6159 8.622157 CCATAGTGAAATCTCTACGAAGACTTA 58.378 37.037 0.00 0.00 0.00 2.24
4600 6160 7.339721 TCCATAGTGAAATCTCTACGAAGACTT 59.660 37.037 0.00 0.00 0.00 3.01
4601 6161 6.829298 TCCATAGTGAAATCTCTACGAAGACT 59.171 38.462 0.00 0.00 0.00 3.24
4602 6162 6.913673 GTCCATAGTGAAATCTCTACGAAGAC 59.086 42.308 0.00 0.00 0.00 3.01
4603 6163 6.829298 AGTCCATAGTGAAATCTCTACGAAGA 59.171 38.462 0.00 0.00 0.00 2.87
4604 6164 7.033530 AGTCCATAGTGAAATCTCTACGAAG 57.966 40.000 0.00 0.00 0.00 3.79
4605 6165 7.555195 TGTAGTCCATAGTGAAATCTCTACGAA 59.445 37.037 0.00 0.00 0.00 3.85
4606 6166 7.052248 TGTAGTCCATAGTGAAATCTCTACGA 58.948 38.462 0.00 0.00 0.00 3.43
4607 6167 7.260558 TGTAGTCCATAGTGAAATCTCTACG 57.739 40.000 0.00 0.00 0.00 3.51
4609 6169 9.000486 CGTATGTAGTCCATAGTGAAATCTCTA 58.000 37.037 0.00 0.00 36.71 2.43
4610 6170 7.040340 CCGTATGTAGTCCATAGTGAAATCTCT 60.040 40.741 0.00 0.00 36.71 3.10
4611 6171 7.040617 TCCGTATGTAGTCCATAGTGAAATCTC 60.041 40.741 0.00 0.00 36.71 2.75
4612 6172 6.776116 TCCGTATGTAGTCCATAGTGAAATCT 59.224 38.462 0.00 0.00 36.71 2.40
4613 6173 6.862090 GTCCGTATGTAGTCCATAGTGAAATC 59.138 42.308 0.00 0.00 36.71 2.17
4614 6174 6.239232 GGTCCGTATGTAGTCCATAGTGAAAT 60.239 42.308 0.00 0.00 36.71 2.17
4615 6175 5.068198 GGTCCGTATGTAGTCCATAGTGAAA 59.932 44.000 0.00 0.00 36.71 2.69
4616 6176 4.581824 GGTCCGTATGTAGTCCATAGTGAA 59.418 45.833 0.00 0.00 36.71 3.18
4617 6177 4.139786 GGTCCGTATGTAGTCCATAGTGA 58.860 47.826 0.00 0.00 36.71 3.41
4618 6178 3.887110 TGGTCCGTATGTAGTCCATAGTG 59.113 47.826 0.00 0.00 36.71 2.74
4619 6179 4.174704 TGGTCCGTATGTAGTCCATAGT 57.825 45.455 0.00 0.00 36.71 2.12
4620 6180 5.524971 TTTGGTCCGTATGTAGTCCATAG 57.475 43.478 0.00 0.00 36.71 2.23
4621 6181 5.936187 TTTTGGTCCGTATGTAGTCCATA 57.064 39.130 0.00 0.00 34.86 2.74
4622 6182 4.829872 TTTTGGTCCGTATGTAGTCCAT 57.170 40.909 0.00 0.00 37.58 3.41
4623 6183 4.020039 ACATTTTGGTCCGTATGTAGTCCA 60.020 41.667 2.45 0.00 29.93 4.02
4624 6184 4.331717 CACATTTTGGTCCGTATGTAGTCC 59.668 45.833 3.75 0.00 30.53 3.85
4625 6185 4.933400 ACACATTTTGGTCCGTATGTAGTC 59.067 41.667 3.75 0.00 30.53 2.59
4626 6186 4.901868 ACACATTTTGGTCCGTATGTAGT 58.098 39.130 3.75 3.21 30.53 2.73
4627 6187 6.971527 TTACACATTTTGGTCCGTATGTAG 57.028 37.500 3.75 2.76 30.53 2.74
4628 6188 6.709397 TGTTTACACATTTTGGTCCGTATGTA 59.291 34.615 3.75 0.00 30.53 2.29
4629 6189 5.531659 TGTTTACACATTTTGGTCCGTATGT 59.468 36.000 0.00 0.00 0.00 2.29
4630 6190 6.003234 TGTTTACACATTTTGGTCCGTATG 57.997 37.500 0.00 0.00 0.00 2.39
4631 6191 6.127842 GGATGTTTACACATTTTGGTCCGTAT 60.128 38.462 0.00 0.00 44.22 3.06
4632 6192 5.181622 GGATGTTTACACATTTTGGTCCGTA 59.818 40.000 0.00 0.00 44.22 4.02
4633 6193 4.022676 GGATGTTTACACATTTTGGTCCGT 60.023 41.667 0.00 0.00 44.22 4.69
4634 6194 4.217550 AGGATGTTTACACATTTTGGTCCG 59.782 41.667 0.00 0.00 44.22 4.79
4635 6195 5.722021 AGGATGTTTACACATTTTGGTCC 57.278 39.130 0.00 0.00 44.22 4.46
4636 6196 7.040686 ACACTAGGATGTTTACACATTTTGGTC 60.041 37.037 0.00 0.00 44.22 4.02
4637 6197 6.775629 ACACTAGGATGTTTACACATTTTGGT 59.224 34.615 0.00 0.00 44.22 3.67
4638 6198 7.083858 CACACTAGGATGTTTACACATTTTGG 58.916 38.462 0.00 0.00 44.22 3.28
4639 6199 7.083858 CCACACTAGGATGTTTACACATTTTG 58.916 38.462 0.00 0.00 44.22 2.44
4640 6200 6.775629 ACCACACTAGGATGTTTACACATTTT 59.224 34.615 0.00 0.00 44.22 1.82
4641 6201 6.206634 CACCACACTAGGATGTTTACACATTT 59.793 38.462 0.00 0.00 44.22 2.32
4642 6202 5.705441 CACCACACTAGGATGTTTACACATT 59.295 40.000 0.00 0.00 44.22 2.71
4644 6204 4.637276 CACCACACTAGGATGTTTACACA 58.363 43.478 0.00 0.00 37.31 3.72
4645 6205 3.435671 GCACCACACTAGGATGTTTACAC 59.564 47.826 0.00 0.00 0.00 2.90
4646 6206 3.071747 TGCACCACACTAGGATGTTTACA 59.928 43.478 0.00 0.00 0.00 2.41
4647 6207 3.670625 TGCACCACACTAGGATGTTTAC 58.329 45.455 0.00 0.00 0.00 2.01
4648 6208 4.568072 ATGCACCACACTAGGATGTTTA 57.432 40.909 0.00 0.00 0.00 2.01
4649 6209 2.949177 TGCACCACACTAGGATGTTT 57.051 45.000 0.00 0.00 0.00 2.83
4650 6210 3.519510 ACTATGCACCACACTAGGATGTT 59.480 43.478 0.00 0.00 0.00 2.71
4651 6211 3.107601 ACTATGCACCACACTAGGATGT 58.892 45.455 0.00 0.00 0.00 3.06
4652 6212 3.132824 TCACTATGCACCACACTAGGATG 59.867 47.826 0.00 0.00 0.00 3.51
4653 6213 3.374764 TCACTATGCACCACACTAGGAT 58.625 45.455 0.00 0.00 0.00 3.24
4654 6214 2.815158 TCACTATGCACCACACTAGGA 58.185 47.619 0.00 0.00 0.00 2.94
4655 6215 3.610040 TTCACTATGCACCACACTAGG 57.390 47.619 0.00 0.00 0.00 3.02
4656 6216 5.423015 AGATTTCACTATGCACCACACTAG 58.577 41.667 0.00 0.00 0.00 2.57
4657 6217 5.187772 AGAGATTTCACTATGCACCACACTA 59.812 40.000 0.00 0.00 0.00 2.74
4658 6218 4.019860 AGAGATTTCACTATGCACCACACT 60.020 41.667 0.00 0.00 0.00 3.55
4659 6219 4.256920 AGAGATTTCACTATGCACCACAC 58.743 43.478 0.00 0.00 0.00 3.82
4660 6220 4.558226 AGAGATTTCACTATGCACCACA 57.442 40.909 0.00 0.00 0.00 4.17
4661 6221 8.144478 TCTTATAGAGATTTCACTATGCACCAC 58.856 37.037 7.52 0.00 33.08 4.16
4662 6222 8.144478 GTCTTATAGAGATTTCACTATGCACCA 58.856 37.037 7.52 0.00 36.61 4.17
4663 6223 8.364142 AGTCTTATAGAGATTTCACTATGCACC 58.636 37.037 7.52 0.00 36.61 5.01
4664 6224 9.757227 AAGTCTTATAGAGATTTCACTATGCAC 57.243 33.333 7.52 2.97 36.61 4.57
4682 6242 8.813951 CCCTCCGTTCCTAAATATAAGTCTTAT 58.186 37.037 9.98 9.98 0.00 1.73
4683 6243 8.006564 TCCCTCCGTTCCTAAATATAAGTCTTA 58.993 37.037 0.00 0.00 0.00 2.10
4684 6244 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
4685 6245 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
4686 6246 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
4687 6247 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
4688 6248 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
4689 6249 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
4690 6250 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
4691 6251 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
4692 6252 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
4693 6253 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
4694 6254 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
4695 6255 3.203710 TCATCTACTCCCTCCGTTCCTAA 59.796 47.826 0.00 0.00 0.00 2.69
4696 6256 2.781757 TCATCTACTCCCTCCGTTCCTA 59.218 50.000 0.00 0.00 0.00 2.94
4697 6257 1.569548 TCATCTACTCCCTCCGTTCCT 59.430 52.381 0.00 0.00 0.00 3.36
4698 6258 2.068834 TCATCTACTCCCTCCGTTCC 57.931 55.000 0.00 0.00 0.00 3.62
4699 6259 4.653868 TCTATCATCTACTCCCTCCGTTC 58.346 47.826 0.00 0.00 0.00 3.95
4700 6260 4.726035 TCTATCATCTACTCCCTCCGTT 57.274 45.455 0.00 0.00 0.00 4.44
4701 6261 4.594970 CATCTATCATCTACTCCCTCCGT 58.405 47.826 0.00 0.00 0.00 4.69
4702 6262 3.380004 GCATCTATCATCTACTCCCTCCG 59.620 52.174 0.00 0.00 0.00 4.63
4703 6263 4.609301 AGCATCTATCATCTACTCCCTCC 58.391 47.826 0.00 0.00 0.00 4.30
4704 6264 5.260424 TGAGCATCTATCATCTACTCCCTC 58.740 45.833 0.00 0.00 34.92 4.30
4705 6265 5.268131 TGAGCATCTATCATCTACTCCCT 57.732 43.478 0.00 0.00 34.92 4.20
4706 6266 6.380846 AGAATGAGCATCTATCATCTACTCCC 59.619 42.308 0.00 0.00 36.38 4.30
4707 6267 7.093814 ACAGAATGAGCATCTATCATCTACTCC 60.094 40.741 0.00 0.00 39.69 3.85
4708 6268 7.829725 ACAGAATGAGCATCTATCATCTACTC 58.170 38.462 0.00 0.00 39.69 2.59
4721 6281 5.563475 GCAACAGTTTGTACAGAATGAGCAT 60.563 40.000 19.24 1.64 35.57 3.79
4747 6307 2.103432 TCAACTAGGCTTCACGGAAACA 59.897 45.455 0.00 0.00 0.00 2.83
4867 6444 7.173735 GCTTTTGATCAATCCTGTGGAAATTTT 59.826 33.333 9.40 0.00 34.34 1.82
4868 6445 6.652062 GCTTTTGATCAATCCTGTGGAAATTT 59.348 34.615 9.40 0.00 34.34 1.82
4869 6446 6.168389 GCTTTTGATCAATCCTGTGGAAATT 58.832 36.000 9.40 0.00 34.34 1.82
4870 6447 5.337813 GGCTTTTGATCAATCCTGTGGAAAT 60.338 40.000 9.40 0.00 34.34 2.17
4911 6488 0.875059 CCGGAGAAGTTTCTGTTGCC 59.125 55.000 0.00 0.00 37.73 4.52
4940 6518 8.624367 TCTTCAGATTAAACCGTCCATTTTAA 57.376 30.769 0.00 0.00 33.00 1.52
4941 6519 8.624367 TTCTTCAGATTAAACCGTCCATTTTA 57.376 30.769 0.00 0.00 0.00 1.52
4955 6535 9.562408 ACTACGAGTATGAGATTCTTCAGATTA 57.438 33.333 0.00 0.00 0.00 1.75
5022 6740 5.955959 TCAGCCAGTAGTGAGTTAGGATTTA 59.044 40.000 0.00 0.00 0.00 1.40
5024 6742 4.353777 TCAGCCAGTAGTGAGTTAGGATT 58.646 43.478 0.00 0.00 0.00 3.01
5065 6788 7.634817 CGTCGTCACCAATCAAATTAATTAGTC 59.365 37.037 0.01 0.00 0.00 2.59
5084 6811 1.945354 GCTCATCTTCCCCGTCGTCA 61.945 60.000 0.00 0.00 0.00 4.35
5085 6812 1.227002 GCTCATCTTCCCCGTCGTC 60.227 63.158 0.00 0.00 0.00 4.20
5088 6815 1.956629 TTCGGCTCATCTTCCCCGTC 61.957 60.000 0.00 0.00 41.38 4.79
5137 6864 0.461339 AAAGTCAGTCACCACGCGTT 60.461 50.000 10.22 0.00 0.00 4.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.