Multiple sequence alignment - TraesCS3D01G283500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G283500 chr3D 100.000 5273 0 0 1 5273 392025547 392030819 0.000000e+00 9738.0
1 TraesCS3D01G283500 chr3D 100.000 2101 0 0 5593 7693 392031139 392033239 0.000000e+00 3880.0
2 TraesCS3D01G283500 chr3D 93.908 1149 60 4 6144 7288 392340710 392339568 0.000000e+00 1725.0
3 TraesCS3D01G283500 chr3D 89.009 737 48 17 3959 4693 392341508 392340803 0.000000e+00 881.0
4 TraesCS3D01G283500 chr3D 91.887 530 37 4 5594 6118 608802155 608802683 0.000000e+00 736.0
5 TraesCS3D01G283500 chr3D 90.720 528 37 10 5594 6118 551594090 551593572 0.000000e+00 693.0
6 TraesCS3D01G283500 chr3D 92.766 470 14 10 4820 5273 608801576 608802041 0.000000e+00 662.0
7 TraesCS3D01G283500 chr3D 92.857 406 27 2 3504 3909 392342006 392341603 8.600000e-164 588.0
8 TraesCS3D01G283500 chr3D 78.108 1110 107 69 607 1658 392362423 392361392 5.180000e-161 579.0
9 TraesCS3D01G283500 chr3D 93.443 366 24 0 3135 3500 392348731 392348366 1.890000e-150 544.0
10 TraesCS3D01G283500 chr3D 87.879 462 39 13 1700 2154 392361189 392360738 1.900000e-145 527.0
11 TraesCS3D01G283500 chr3D 84.211 456 33 15 4822 5272 13746511 13746932 2.580000e-109 407.0
12 TraesCS3D01G283500 chr3D 90.000 100 4 3 2507 2602 392351454 392351357 2.910000e-24 124.0
13 TraesCS3D01G283500 chr3A 91.361 2998 148 47 1 2948 512273754 512276690 0.000000e+00 3999.0
14 TraesCS3D01G283500 chr3A 90.634 1815 94 34 2937 4685 512277370 512279174 0.000000e+00 2340.0
15 TraesCS3D01G283500 chr3A 94.273 1135 63 2 6146 7280 512279288 512280420 0.000000e+00 1735.0
16 TraesCS3D01G283500 chr3A 92.965 796 53 3 3115 3910 512319918 512319126 0.000000e+00 1157.0
17 TraesCS3D01G283500 chr3A 94.461 668 33 1 4022 4689 512318864 512318201 0.000000e+00 1026.0
18 TraesCS3D01G283500 chr3A 95.230 608 29 0 6144 6751 512318102 512317495 0.000000e+00 963.0
19 TraesCS3D01G283500 chr3A 94.105 458 24 2 1699 2154 512330104 512329648 0.000000e+00 693.0
20 TraesCS3D01G283500 chr3A 87.311 528 38 11 6778 7288 512317502 512316987 1.860000e-160 577.0
21 TraesCS3D01G283500 chr3A 93.030 330 21 2 7366 7693 512282045 512282374 1.500000e-131 481.0
22 TraesCS3D01G283500 chr3A 83.158 380 36 18 1292 1658 512330548 512330184 9.630000e-84 322.0
23 TraesCS3D01G283500 chr3A 91.469 211 17 1 2606 2816 512321226 512321017 9.770000e-74 289.0
24 TraesCS3D01G283500 chr3A 96.429 84 3 0 2507 2590 512329402 512329319 1.040000e-28 139.0
25 TraesCS3D01G283500 chr3A 100.000 33 0 0 3957 3989 512318899 512318867 2.320000e-05 62.1
26 TraesCS3D01G283500 chr3B 91.645 1927 107 30 2812 4699 511049003 511050914 0.000000e+00 2617.0
27 TraesCS3D01G283500 chr3B 91.333 1350 77 19 6139 7467 511050992 511052322 0.000000e+00 1808.0
28 TraesCS3D01G283500 chr3B 90.783 1226 67 21 457 1658 511034058 511035261 0.000000e+00 1596.0
29 TraesCS3D01G283500 chr3B 87.984 749 57 16 1733 2467 511035381 511036110 0.000000e+00 854.0
30 TraesCS3D01G283500 chr3B 88.352 455 44 7 4822 5270 151580852 151580401 8.780000e-149 538.0
31 TraesCS3D01G283500 chr3B 93.403 288 10 5 2528 2814 511036132 511036411 1.190000e-112 418.0
32 TraesCS3D01G283500 chr3B 95.062 243 6 1 7457 7693 511060850 511061092 2.030000e-100 377.0
33 TraesCS3D01G283500 chr3B 95.122 41 2 0 2038 2078 2512476 2512516 1.790000e-06 65.8
34 TraesCS3D01G283500 chr3B 81.481 81 13 2 2038 2117 3042941 3042862 1.790000e-06 65.8
35 TraesCS3D01G283500 chr5D 91.714 531 34 9 5594 6118 539980160 539979634 0.000000e+00 728.0
36 TraesCS3D01G283500 chr5D 90.755 530 40 8 5594 6118 525393465 525392940 0.000000e+00 699.0
37 TraesCS3D01G283500 chr5D 89.286 560 50 10 5593 6146 450616297 450616852 0.000000e+00 693.0
38 TraesCS3D01G283500 chr5D 89.006 473 29 9 4820 5273 9105512 9105044 1.450000e-156 564.0
39 TraesCS3D01G283500 chr5D 88.085 470 37 9 4820 5273 281166257 281165791 2.440000e-149 540.0
40 TraesCS3D01G283500 chr7D 91.541 532 34 8 5594 6118 406326800 406326273 0.000000e+00 723.0
41 TraesCS3D01G283500 chr7D 91.165 532 38 8 5593 6118 575422608 575423136 0.000000e+00 713.0
42 TraesCS3D01G283500 chr7D 87.118 458 30 9 4820 5273 442279795 442279363 6.940000e-135 492.0
43 TraesCS3D01G283500 chr7D 89.600 375 26 10 4907 5273 147430394 147430763 1.510000e-126 464.0
44 TraesCS3D01G283500 chr2D 91.337 531 35 8 5593 6118 60077300 60077824 0.000000e+00 715.0
45 TraesCS3D01G283500 chr2D 90.364 467 23 9 4819 5273 630021064 630020608 1.850000e-165 593.0
46 TraesCS3D01G283500 chr2D 89.339 469 28 12 4819 5273 55418790 55419250 3.110000e-158 569.0
47 TraesCS3D01G283500 chr2D 84.200 481 37 16 4805 5273 390728563 390728110 1.530000e-116 431.0
48 TraesCS3D01G283500 chr6D 90.548 529 41 8 5593 6118 14600451 14600973 0.000000e+00 691.0
49 TraesCS3D01G283500 chr6D 88.223 467 32 16 4820 5273 40538462 40538006 3.160000e-148 536.0
50 TraesCS3D01G283500 chr6D 89.474 152 10 2 4822 4973 384435461 384435316 3.670000e-43 187.0
51 TraesCS3D01G283500 chr4A 88.793 464 35 8 4822 5273 487547351 487546893 3.140000e-153 553.0
52 TraesCS3D01G283500 chr5A 85.270 482 50 12 4805 5273 708686276 708686749 1.940000e-130 477.0
53 TraesCS3D01G283500 chr2A 83.711 485 42 22 4802 5273 693440145 693439685 2.570000e-114 424.0
54 TraesCS3D01G283500 chr7A 82.609 483 47 17 4805 5273 664164811 664165270 7.240000e-105 392.0
55 TraesCS3D01G283500 chr5B 80.269 446 62 13 4820 5264 78314147 78314567 5.800000e-81 313.0
56 TraesCS3D01G283500 chrUn 87.603 242 16 9 4805 5033 41894995 41894755 1.270000e-67 268.0
57 TraesCS3D01G283500 chrUn 90.099 202 8 5 4822 5022 143904425 143904615 1.280000e-62 252.0
58 TraesCS3D01G283500 chrUn 87.342 158 14 4 4818 4973 306535052 306534899 7.930000e-40 176.0
59 TraesCS3D01G283500 chr4B 78.298 470 57 18 4812 5270 463577215 463576780 2.130000e-65 261.0
60 TraesCS3D01G283500 chr4B 100.000 31 0 0 262 292 489395997 489396027 3.000000e-04 58.4
61 TraesCS3D01G283500 chr1D 86.700 203 12 7 4822 5021 403331075 403330885 2.180000e-50 211.0
62 TraesCS3D01G283500 chr1D 82.278 79 12 2 2039 2116 473659184 473659107 4.980000e-07 67.6
63 TraesCS3D01G283500 chr1A 85.321 218 16 6 4822 5036 541474654 541474450 2.180000e-50 211.0
64 TraesCS3D01G283500 chr1B 74.643 280 63 5 23 298 558282505 558282780 4.880000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G283500 chr3D 392025547 392033239 7692 False 6809.000000 9738 100.000000 1 7693 2 chr3D.!!$F2 7692
1 TraesCS3D01G283500 chr3D 392339568 392342006 2438 True 1064.666667 1725 91.924667 3504 7288 3 chr3D.!!$R2 3784
2 TraesCS3D01G283500 chr3D 608801576 608802683 1107 False 699.000000 736 92.326500 4820 6118 2 chr3D.!!$F3 1298
3 TraesCS3D01G283500 chr3D 551593572 551594090 518 True 693.000000 693 90.720000 5594 6118 1 chr3D.!!$R1 524
4 TraesCS3D01G283500 chr3D 392360738 392362423 1685 True 553.000000 579 82.993500 607 2154 2 chr3D.!!$R4 1547
5 TraesCS3D01G283500 chr3D 392348366 392351454 3088 True 334.000000 544 91.721500 2507 3500 2 chr3D.!!$R3 993
6 TraesCS3D01G283500 chr3A 512273754 512282374 8620 False 2138.750000 3999 92.324500 1 7693 4 chr3A.!!$F1 7692
7 TraesCS3D01G283500 chr3A 512316987 512321226 4239 True 679.016667 1157 93.572667 2606 7288 6 chr3A.!!$R1 4682
8 TraesCS3D01G283500 chr3A 512329319 512330548 1229 True 384.666667 693 91.230667 1292 2590 3 chr3A.!!$R2 1298
9 TraesCS3D01G283500 chr3B 511049003 511052322 3319 False 2212.500000 2617 91.489000 2812 7467 2 chr3B.!!$F4 4655
10 TraesCS3D01G283500 chr3B 511034058 511036411 2353 False 956.000000 1596 90.723333 457 2814 3 chr3B.!!$F3 2357
11 TraesCS3D01G283500 chr5D 539979634 539980160 526 True 728.000000 728 91.714000 5594 6118 1 chr5D.!!$R4 524
12 TraesCS3D01G283500 chr5D 525392940 525393465 525 True 699.000000 699 90.755000 5594 6118 1 chr5D.!!$R3 524
13 TraesCS3D01G283500 chr5D 450616297 450616852 555 False 693.000000 693 89.286000 5593 6146 1 chr5D.!!$F1 553
14 TraesCS3D01G283500 chr7D 406326273 406326800 527 True 723.000000 723 91.541000 5594 6118 1 chr7D.!!$R1 524
15 TraesCS3D01G283500 chr7D 575422608 575423136 528 False 713.000000 713 91.165000 5593 6118 1 chr7D.!!$F2 525
16 TraesCS3D01G283500 chr2D 60077300 60077824 524 False 715.000000 715 91.337000 5593 6118 1 chr2D.!!$F2 525
17 TraesCS3D01G283500 chr6D 14600451 14600973 522 False 691.000000 691 90.548000 5593 6118 1 chr6D.!!$F1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
39 40 0.033504 ATCGTCTTGCTTGTCACGGT 59.966 50.000 0.00 0.00 33.02 4.83 F
66 67 0.249911 ACGAGTCCACTTGTGCCTTC 60.250 55.000 0.00 0.00 39.07 3.46 F
1397 1470 0.457337 GTCAAGGGCAGGTACGTACG 60.457 60.000 18.98 15.01 0.00 3.67 F
2318 2602 0.392461 GGACGCCTTGCTGGAACATA 60.392 55.000 0.49 0.00 38.20 2.29 F
3076 5895 0.578683 CACTGACACTGTGCTTGTCG 59.421 55.000 7.90 0.00 45.44 4.35 F
3483 6812 0.036577 GATGAGCATCTCCATCGGGG 60.037 60.000 3.29 0.00 35.04 5.73 F
3792 7125 1.068055 ACTGACGCGAGATTTACCGTT 60.068 47.619 15.93 0.00 33.63 4.44 F
4627 8189 1.289066 CGCCGTTCTCCTCAAGTCA 59.711 57.895 0.00 0.00 0.00 3.41 F
5649 9366 0.379316 GTCACGGTTTTGCTTTCGGT 59.621 50.000 0.00 0.00 0.00 4.69 F
5701 9418 1.512156 GGCGTGCCTCTTTCGGAAAA 61.512 55.000 2.98 0.00 0.00 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1769 2046 1.265236 CCTCAGTCTTCTCTGCAGGT 58.735 55.000 15.13 0.00 35.63 4.00 R
1780 2057 4.661247 AAGGTAGACACTACCTCAGTCT 57.339 45.455 24.57 10.80 46.52 3.24 R
3046 5830 0.163788 GTGTCAGTGACGCAAATCGG 59.836 55.000 27.78 0.00 41.96 4.18 R
3157 6486 0.248539 CTCGTACGCCTTGAGGTAGC 60.249 60.000 11.24 0.00 37.57 3.58 R
4733 8313 0.179235 CAAATGACGTTGCGTACCGG 60.179 55.000 0.00 0.00 41.37 5.28 R
4812 8397 1.053424 ACTAGTTGCTCCCAAACCGA 58.947 50.000 0.00 0.00 31.68 4.69 R
4849 8434 1.140589 CTGATCGTTGCGAGGCTCT 59.859 57.895 13.50 0.00 39.91 4.09 R
6029 9762 0.030504 CGCCACTTGTTGCAACATGA 59.969 50.000 37.64 23.38 38.95 3.07 R
6545 10278 0.335361 AGCTCTTCTTCTCCCCGGTA 59.665 55.000 0.00 0.00 0.00 4.02 R
6992 10779 0.386476 TCGTGTTGGCGTGAACTACT 59.614 50.000 0.00 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.602323 GACCGTTGTTGGATGGCCA 60.602 57.895 8.56 8.56 44.17 5.36
37 38 1.136252 CCAATCGTCTTGCTTGTCACG 60.136 52.381 0.00 0.00 0.00 4.35
39 40 0.033504 ATCGTCTTGCTTGTCACGGT 59.966 50.000 0.00 0.00 33.02 4.83
60 61 0.470456 TACCCCACGAGTCCACTTGT 60.470 55.000 0.00 0.00 41.13 3.16
66 67 0.249911 ACGAGTCCACTTGTGCCTTC 60.250 55.000 0.00 0.00 39.07 3.46
97 98 2.424956 GAGGAGGAAACCATGCAACATC 59.575 50.000 0.00 0.00 0.00 3.06
119 120 1.429927 CTGGCGAGCTGCTCATTCTG 61.430 60.000 27.46 12.96 45.43 3.02
122 123 0.738762 GCGAGCTGCTCATTCTGTCA 60.739 55.000 27.46 0.00 41.73 3.58
136 137 2.121564 CTGTCAGCAGGTTTGGCACG 62.122 60.000 0.00 0.00 39.01 5.34
180 181 3.717400 TCTTCTGATCTACCGCATGAC 57.283 47.619 0.00 0.00 0.00 3.06
181 182 2.033424 TCTTCTGATCTACCGCATGACG 59.967 50.000 0.00 0.00 43.15 4.35
198 199 0.597637 ACGACACAGCTTTCCAGACG 60.598 55.000 0.00 0.00 0.00 4.18
207 208 2.397413 CTTTCCAGACGTGGTGGGCT 62.397 60.000 12.56 0.00 45.28 5.19
242 243 4.749310 ACCCGCTTCTGCTCGCAG 62.749 66.667 12.54 12.54 44.86 5.18
250 251 4.463879 CTGCTCGCAGGGGTCTGG 62.464 72.222 10.98 0.00 41.19 3.86
313 314 2.290367 TGGAACAACTGCATCTTCAACG 59.710 45.455 0.00 0.00 31.92 4.10
341 342 1.202428 GCCATCGGTTACCTGTCTCTC 60.202 57.143 0.00 0.00 0.00 3.20
358 359 1.001974 TCTCCACCACCATCAAAGACG 59.998 52.381 0.00 0.00 0.00 4.18
364 365 1.611673 CCACCATCAAAGACGAGGCTT 60.612 52.381 0.00 0.00 0.00 4.35
366 367 1.072331 ACCATCAAAGACGAGGCTTGT 59.928 47.619 7.22 7.22 0.00 3.16
498 518 2.541762 GTCTCATGAGCGCTTGTAATCC 59.458 50.000 18.36 0.00 0.00 3.01
507 527 2.094752 GCGCTTGTAATCCCATGTTGTT 60.095 45.455 0.00 0.00 0.00 2.83
513 533 6.183360 GCTTGTAATCCCATGTTGTTACTCTC 60.183 42.308 10.66 0.84 0.00 3.20
659 679 4.437390 CGCCAGACTAGCTATTTTTGTTGG 60.437 45.833 0.00 1.28 0.00 3.77
677 697 1.047801 GGTGGTGAAAATGCCAAGGT 58.952 50.000 0.00 0.00 36.41 3.50
725 745 8.840321 CCAGACCACAATATCCAAGTTAATTAG 58.160 37.037 0.00 0.00 0.00 1.73
831 853 6.159293 GGGAAGAAAGCAGGAAATTACAAAG 58.841 40.000 0.00 0.00 0.00 2.77
873 901 1.271102 GATGGTATCGTCTCAGAGGGC 59.729 57.143 0.00 0.00 0.00 5.19
995 1034 4.208686 CAGAGGGAGGTACCGCGC 62.209 72.222 22.67 22.67 40.11 6.86
1176 1238 8.383175 TCAAGGGTCTAGTTTGACTTTGATTAT 58.617 33.333 0.00 0.00 36.56 1.28
1211 1275 3.118112 AGTCCTACCCTTCATGATGCTTG 60.118 47.826 0.00 0.00 0.00 4.01
1212 1276 3.114606 TCCTACCCTTCATGATGCTTGA 58.885 45.455 0.00 0.00 0.00 3.02
1213 1277 3.718434 TCCTACCCTTCATGATGCTTGAT 59.282 43.478 0.00 0.00 0.00 2.57
1214 1278 3.819337 CCTACCCTTCATGATGCTTGATG 59.181 47.826 0.00 0.00 0.00 3.07
1215 1279 2.029623 ACCCTTCATGATGCTTGATGC 58.970 47.619 0.00 0.00 43.25 3.91
1280 1353 0.533032 TCATGTCGCCGTTGTGGATA 59.467 50.000 0.00 0.00 42.00 2.59
1281 1354 1.066787 TCATGTCGCCGTTGTGGATAA 60.067 47.619 0.00 0.00 42.00 1.75
1282 1355 1.939934 CATGTCGCCGTTGTGGATAAT 59.060 47.619 0.00 0.00 42.00 1.28
1356 1429 1.227973 GGGGGCGATCCTTGATGAC 60.228 63.158 0.00 0.00 35.33 3.06
1397 1470 0.457337 GTCAAGGGCAGGTACGTACG 60.457 60.000 18.98 15.01 0.00 3.67
1398 1471 0.895100 TCAAGGGCAGGTACGTACGT 60.895 55.000 25.98 25.98 0.00 3.57
1399 1472 0.810648 CAAGGGCAGGTACGTACGTA 59.189 55.000 23.60 23.60 0.00 3.57
1455 1544 1.884464 CGCCGTGCACTGCTCATAT 60.884 57.895 27.28 0.00 0.00 1.78
1461 1550 4.498241 CCGTGCACTGCTCATATATACAT 58.502 43.478 16.19 0.00 0.00 2.29
2113 2391 2.358737 CGGTGGAAGGGAGTGTGC 60.359 66.667 0.00 0.00 0.00 4.57
2141 2419 3.135530 AGGAGATTCCTTCAATTCCTCCG 59.864 47.826 0.00 0.00 46.91 4.63
2176 2454 1.312371 TAAATCGGCTGCTTGTGGGC 61.312 55.000 0.00 0.00 0.00 5.36
2201 2479 7.489757 GCTTATTCGGGTATAATCAGCTCTTAG 59.510 40.741 0.00 0.00 33.02 2.18
2204 2482 6.814506 TCGGGTATAATCAGCTCTTAGTAC 57.185 41.667 0.00 0.00 0.00 2.73
2318 2602 0.392461 GGACGCCTTGCTGGAACATA 60.392 55.000 0.49 0.00 38.20 2.29
2319 2603 1.668419 GACGCCTTGCTGGAACATAT 58.332 50.000 0.49 0.00 38.20 1.78
2351 2635 6.641723 GTCGGTCTATTCAGGCTAGTATTTTC 59.358 42.308 0.00 0.00 0.00 2.29
2361 2645 5.470098 CAGGCTAGTATTTTCTGTGTGTTGT 59.530 40.000 0.00 0.00 0.00 3.32
2409 2700 2.013563 GCGTCTTGCCATCTTCCATCA 61.014 52.381 0.00 0.00 37.76 3.07
2412 2703 2.034305 GTCTTGCCATCTTCCATCATGC 59.966 50.000 0.00 0.00 0.00 4.06
2417 2708 1.202734 CCATCTTCCATCATGCGACCT 60.203 52.381 0.00 0.00 0.00 3.85
2452 2743 7.351414 TCACTTCGTCAGACTAAAAATCATG 57.649 36.000 0.00 0.00 0.00 3.07
2459 2750 8.869897 TCGTCAGACTAAAAATCATGACAATAC 58.130 33.333 0.00 0.00 37.50 1.89
2461 2752 8.946085 GTCAGACTAAAAATCATGACAATACCA 58.054 33.333 0.00 0.00 37.56 3.25
2472 2763 6.957631 TCATGACAATACCAAACTACTCCAT 58.042 36.000 0.00 0.00 0.00 3.41
2473 2764 6.823182 TCATGACAATACCAAACTACTCCATG 59.177 38.462 0.00 0.00 0.00 3.66
2474 2765 4.941263 TGACAATACCAAACTACTCCATGC 59.059 41.667 0.00 0.00 0.00 4.06
2475 2766 4.917385 ACAATACCAAACTACTCCATGCA 58.083 39.130 0.00 0.00 0.00 3.96
2478 2769 3.508845 ACCAAACTACTCCATGCAACT 57.491 42.857 0.00 0.00 0.00 3.16
2479 2770 3.832527 ACCAAACTACTCCATGCAACTT 58.167 40.909 0.00 0.00 0.00 2.66
2480 2771 3.569701 ACCAAACTACTCCATGCAACTTG 59.430 43.478 0.00 0.00 0.00 3.16
2481 2772 3.820467 CCAAACTACTCCATGCAACTTGA 59.180 43.478 0.00 0.00 0.00 3.02
2482 2773 4.083110 CCAAACTACTCCATGCAACTTGAG 60.083 45.833 0.00 0.00 0.00 3.02
2483 2774 4.623932 AACTACTCCATGCAACTTGAGA 57.376 40.909 10.83 0.00 0.00 3.27
2484 2775 4.833478 ACTACTCCATGCAACTTGAGAT 57.167 40.909 10.83 1.16 0.00 2.75
2485 2776 5.939764 ACTACTCCATGCAACTTGAGATA 57.060 39.130 10.83 2.00 0.00 1.98
2486 2777 5.665459 ACTACTCCATGCAACTTGAGATAC 58.335 41.667 10.83 0.00 0.00 2.24
2487 2778 4.558226 ACTCCATGCAACTTGAGATACA 57.442 40.909 10.83 0.00 0.00 2.29
2488 2779 4.910195 ACTCCATGCAACTTGAGATACAA 58.090 39.130 10.83 0.00 36.97 2.41
2592 2887 0.949105 CGACCAAAGGAGAACCACCG 60.949 60.000 0.00 0.00 38.94 4.94
2850 4533 3.375299 GTCCGCCGTAGAGTAGTTTTCTA 59.625 47.826 0.00 0.00 0.00 2.10
2988 5772 4.026886 TGCAGAAAAATCGTCGTGATATCG 60.027 41.667 0.00 0.00 35.84 2.92
3046 5830 5.351458 GCCAAATCAGATGATTGTTAACCC 58.649 41.667 8.76 0.00 43.41 4.11
3076 5895 0.578683 CACTGACACTGTGCTTGTCG 59.421 55.000 7.90 0.00 45.44 4.35
3124 6449 8.440833 TGAGATACAGTGATAATCATACGTACG 58.559 37.037 15.01 15.01 0.00 3.67
3125 6450 8.320396 AGATACAGTGATAATCATACGTACGT 57.680 34.615 25.98 25.98 0.00 3.57
3471 6800 2.504026 GCGTCGACGTGATGAGCA 60.504 61.111 35.48 0.00 42.22 4.26
3483 6812 0.036577 GATGAGCATCTCCATCGGGG 60.037 60.000 3.29 0.00 35.04 5.73
3715 7044 2.224281 TGATCATGGTAAGCGCCTAAGG 60.224 50.000 2.29 0.00 0.00 2.69
3718 7047 2.438021 TCATGGTAAGCGCCTAAGGAAT 59.562 45.455 2.29 0.00 0.00 3.01
3721 7050 3.013921 TGGTAAGCGCCTAAGGAATTTG 58.986 45.455 2.29 0.00 0.00 2.32
3781 7114 5.870433 TCTAAATAAAAATGGACTGACGCGA 59.130 36.000 15.93 0.00 0.00 5.87
3792 7125 1.068055 ACTGACGCGAGATTTACCGTT 60.068 47.619 15.93 0.00 33.63 4.44
3889 7222 2.669569 CCGTGGTTCCTGGCACTG 60.670 66.667 0.00 0.00 0.00 3.66
3951 7487 6.390721 ACAGCACTAGTAGTAACAATCACTG 58.609 40.000 1.57 3.98 0.00 3.66
3998 7534 6.220201 ACAAGGTTCAAATTTCGTATTTGGG 58.780 36.000 18.65 9.31 38.97 4.12
4206 7742 1.596934 GGAACGGCAGTCTCCATGA 59.403 57.895 11.32 0.00 31.94 3.07
4209 7745 1.480212 AACGGCAGTCTCCATGACCA 61.480 55.000 0.00 0.00 46.46 4.02
4214 7750 1.878102 GCAGTCTCCATGACCAACGTT 60.878 52.381 0.00 0.00 46.46 3.99
4235 7773 6.071221 ACGTTAACACCATCCTCAAGTACATA 60.071 38.462 6.39 0.00 0.00 2.29
4245 7783 4.777896 TCCTCAAGTACATAAACTCCAGCT 59.222 41.667 0.00 0.00 0.00 4.24
4268 7806 1.376812 CCCAACCGCTTACCTGGAC 60.377 63.158 0.00 0.00 0.00 4.02
4305 7843 3.292936 ACGTGAAGCCGTCTCCGT 61.293 61.111 0.00 0.00 35.95 4.69
4627 8189 1.289066 CGCCGTTCTCCTCAAGTCA 59.711 57.895 0.00 0.00 0.00 3.41
4770 8355 3.517296 TTGTATTGGGCCAAGTTCTGA 57.483 42.857 25.16 5.49 0.00 3.27
4776 8361 3.243359 TGGGCCAAGTTCTGATTTTCT 57.757 42.857 2.13 0.00 0.00 2.52
4780 8365 4.991056 GGGCCAAGTTCTGATTTTCTTTTC 59.009 41.667 4.39 0.00 0.00 2.29
4799 8384 7.673180 TCTTTTCCTTTGATTGAGAATGCAAT 58.327 30.769 0.00 0.00 40.96 3.56
4801 8386 7.661127 TTTCCTTTGATTGAGAATGCAATTG 57.339 32.000 0.00 0.00 36.07 2.32
4802 8387 6.349243 TCCTTTGATTGAGAATGCAATTGT 57.651 33.333 7.40 0.00 36.07 2.71
4804 8389 5.929992 CCTTTGATTGAGAATGCAATTGTGT 59.070 36.000 7.40 0.00 36.07 3.72
4808 8393 6.614160 TGATTGAGAATGCAATTGTGTAGTG 58.386 36.000 7.40 0.00 36.07 2.74
4809 8394 6.430616 TGATTGAGAATGCAATTGTGTAGTGA 59.569 34.615 7.40 0.00 36.07 3.41
4810 8395 6.822667 TTGAGAATGCAATTGTGTAGTGAT 57.177 33.333 7.40 0.00 36.07 3.06
4811 8396 6.822667 TGAGAATGCAATTGTGTAGTGATT 57.177 33.333 7.40 0.00 36.07 2.57
4812 8397 7.218228 TGAGAATGCAATTGTGTAGTGATTT 57.782 32.000 7.40 0.00 36.07 2.17
4813 8398 7.307694 TGAGAATGCAATTGTGTAGTGATTTC 58.692 34.615 7.40 0.00 36.07 2.17
4814 8399 6.317088 AGAATGCAATTGTGTAGTGATTTCG 58.683 36.000 7.40 0.00 36.07 3.46
4815 8400 4.418013 TGCAATTGTGTAGTGATTTCGG 57.582 40.909 7.40 0.00 0.00 4.30
4816 8401 3.818210 TGCAATTGTGTAGTGATTTCGGT 59.182 39.130 7.40 0.00 0.00 4.69
4817 8402 4.277174 TGCAATTGTGTAGTGATTTCGGTT 59.723 37.500 7.40 0.00 0.00 4.44
4818 8403 5.219633 GCAATTGTGTAGTGATTTCGGTTT 58.780 37.500 7.40 0.00 0.00 3.27
4849 8434 0.455633 GTTAACGAGCGCTCCTTCGA 60.456 55.000 30.66 14.76 0.00 3.71
4876 8461 1.133253 CAACGATCAGCGCCACTTG 59.867 57.895 2.29 0.00 46.04 3.16
5011 8608 1.352017 GTTTTCCCCCGGTCTTCCTTA 59.648 52.381 0.00 0.00 0.00 2.69
5135 8732 4.818417 CACGGTTGTGCTTTAGCG 57.182 55.556 0.00 0.00 45.83 4.26
5649 9366 0.379316 GTCACGGTTTTGCTTTCGGT 59.621 50.000 0.00 0.00 0.00 4.69
5701 9418 1.512156 GGCGTGCCTCTTTCGGAAAA 61.512 55.000 2.98 0.00 0.00 2.29
5970 9703 4.399618 TGAAAACGGTTTGAGATTTGGACA 59.600 37.500 1.45 0.00 0.00 4.02
5983 9716 5.127491 AGATTTGGACACACGGTTTAAGAA 58.873 37.500 0.00 0.00 0.00 2.52
6038 9771 6.418057 AAAAGGGAAAACTATCATGTTGCA 57.582 33.333 0.00 0.00 0.00 4.08
6127 9860 7.931275 GGAGTACTCCTTAATTGCTTAATTGG 58.069 38.462 31.12 0.00 46.16 3.16
6128 9861 7.556635 GGAGTACTCCTTAATTGCTTAATTGGT 59.443 37.037 31.12 0.00 46.16 3.67
6129 9862 8.281212 AGTACTCCTTAATTGCTTAATTGGTG 57.719 34.615 0.00 0.00 0.00 4.17
6130 9863 8.107095 AGTACTCCTTAATTGCTTAATTGGTGA 58.893 33.333 0.00 0.00 0.00 4.02
6131 9864 7.961326 ACTCCTTAATTGCTTAATTGGTGAT 57.039 32.000 0.00 0.00 0.00 3.06
6132 9865 8.366359 ACTCCTTAATTGCTTAATTGGTGATT 57.634 30.769 0.00 0.00 0.00 2.57
6133 9866 8.815912 ACTCCTTAATTGCTTAATTGGTGATTT 58.184 29.630 0.00 0.00 0.00 2.17
6134 9867 9.305925 CTCCTTAATTGCTTAATTGGTGATTTC 57.694 33.333 0.00 0.00 0.00 2.17
6135 9868 7.973388 TCCTTAATTGCTTAATTGGTGATTTCG 59.027 33.333 0.00 0.00 0.00 3.46
6136 9869 7.222611 CCTTAATTGCTTAATTGGTGATTTCGG 59.777 37.037 0.00 0.00 0.00 4.30
6137 9870 5.659440 ATTGCTTAATTGGTGATTTCGGT 57.341 34.783 0.00 0.00 0.00 4.69
6142 9875 2.723124 ATTGGTGATTTCGGTTGTGC 57.277 45.000 0.00 0.00 0.00 4.57
6167 9900 2.420372 TGTCGTTTTTACAGCAACAGCA 59.580 40.909 0.00 0.00 0.00 4.41
6479 10212 1.819632 GCACGGGGCTCATTACAGG 60.820 63.158 0.00 0.00 40.25 4.00
6746 10522 7.812309 TGAAGAATAGATGAACACGTACAAG 57.188 36.000 0.00 0.00 0.00 3.16
6747 10523 7.599171 TGAAGAATAGATGAACACGTACAAGA 58.401 34.615 0.00 0.00 0.00 3.02
6748 10524 7.541091 TGAAGAATAGATGAACACGTACAAGAC 59.459 37.037 0.00 0.00 0.00 3.01
6749 10525 7.159322 AGAATAGATGAACACGTACAAGACT 57.841 36.000 0.00 0.00 0.00 3.24
6750 10526 8.277490 AGAATAGATGAACACGTACAAGACTA 57.723 34.615 0.00 0.00 0.00 2.59
6751 10527 8.904834 AGAATAGATGAACACGTACAAGACTAT 58.095 33.333 0.00 0.00 0.00 2.12
6752 10528 9.517609 GAATAGATGAACACGTACAAGACTATT 57.482 33.333 11.23 11.23 32.19 1.73
6753 10529 8.858003 ATAGATGAACACGTACAAGACTATTG 57.142 34.615 0.00 0.00 0.00 1.90
6754 10530 6.688578 AGATGAACACGTACAAGACTATTGT 58.311 36.000 0.00 0.00 36.49 2.71
6755 10531 6.586463 AGATGAACACGTACAAGACTATTGTG 59.414 38.462 3.58 0.00 34.11 3.33
6756 10532 5.834169 TGAACACGTACAAGACTATTGTGA 58.166 37.500 3.58 0.00 34.11 3.58
6757 10533 6.274579 TGAACACGTACAAGACTATTGTGAA 58.725 36.000 3.58 0.00 34.11 3.18
6758 10534 6.757478 TGAACACGTACAAGACTATTGTGAAA 59.243 34.615 3.58 0.00 34.11 2.69
6759 10535 7.439955 TGAACACGTACAAGACTATTGTGAAAT 59.560 33.333 3.58 0.00 34.11 2.17
6760 10536 7.347508 ACACGTACAAGACTATTGTGAAATC 57.652 36.000 3.58 0.00 34.11 2.17
6761 10537 7.152645 ACACGTACAAGACTATTGTGAAATCT 58.847 34.615 3.58 0.00 34.11 2.40
6762 10538 8.301720 ACACGTACAAGACTATTGTGAAATCTA 58.698 33.333 3.58 0.00 34.11 1.98
6763 10539 9.302345 CACGTACAAGACTATTGTGAAATCTAT 57.698 33.333 3.58 0.00 34.11 1.98
6764 10540 9.517609 ACGTACAAGACTATTGTGAAATCTATC 57.482 33.333 3.58 0.00 34.11 2.08
6765 10541 8.682895 CGTACAAGACTATTGTGAAATCTATCG 58.317 37.037 3.58 0.00 34.11 2.92
6766 10542 9.731819 GTACAAGACTATTGTGAAATCTATCGA 57.268 33.333 3.58 0.00 34.11 3.59
6768 10544 9.307121 ACAAGACTATTGTGAAATCTATCGAAG 57.693 33.333 0.00 0.00 0.00 3.79
6769 10545 9.307121 CAAGACTATTGTGAAATCTATCGAAGT 57.693 33.333 0.00 0.00 0.00 3.01
6770 10546 9.522804 AAGACTATTGTGAAATCTATCGAAGTC 57.477 33.333 0.00 0.00 0.00 3.01
6771 10547 8.687242 AGACTATTGTGAAATCTATCGAAGTCA 58.313 33.333 6.83 0.00 0.00 3.41
6772 10548 8.635877 ACTATTGTGAAATCTATCGAAGTCAC 57.364 34.615 0.00 6.68 37.45 3.67
6773 10549 6.910536 ATTGTGAAATCTATCGAAGTCACC 57.089 37.500 9.70 0.00 36.73 4.02
6774 10550 5.400066 TGTGAAATCTATCGAAGTCACCA 57.600 39.130 9.70 0.00 36.73 4.17
6775 10551 5.410924 TGTGAAATCTATCGAAGTCACCAG 58.589 41.667 9.70 0.00 36.73 4.00
6776 10552 5.047306 TGTGAAATCTATCGAAGTCACCAGT 60.047 40.000 9.70 0.00 36.73 4.00
6777 10553 5.517054 GTGAAATCTATCGAAGTCACCAGTC 59.483 44.000 0.00 0.00 33.89 3.51
6778 10554 5.185056 TGAAATCTATCGAAGTCACCAGTCA 59.815 40.000 0.00 0.00 0.00 3.41
6779 10555 5.661056 AATCTATCGAAGTCACCAGTCAA 57.339 39.130 0.00 0.00 0.00 3.18
6801 10577 1.814394 ACTACTCCGTCGTTGTGCATA 59.186 47.619 0.00 0.00 0.00 3.14
6850 10626 1.822990 GTGTCCCGTTATGGAGTCTCA 59.177 52.381 1.47 0.00 42.00 3.27
6948 10735 2.203394 CTGCAGGCCAACCACACT 60.203 61.111 5.01 0.00 39.06 3.55
6992 10779 2.267642 GGTGTATGACCGGCAGCA 59.732 61.111 0.00 0.00 34.02 4.41
7057 10844 0.602638 TGCCACAGTAGAAAGCCGTG 60.603 55.000 0.00 0.00 0.00 4.94
7089 10876 2.238898 TCGTCACTAGAGTCCAGGATCA 59.761 50.000 0.00 0.00 0.00 2.92
7102 10889 4.593206 GTCCAGGATCACAGGATATACCAA 59.407 45.833 0.00 0.00 42.04 3.67
7170 10969 1.225376 ACGCGCGGTGAAAATTCAGA 61.225 50.000 35.22 0.00 37.98 3.27
7187 10986 2.141517 CAGAGGCTGCTTGGATATTCG 58.858 52.381 0.00 0.00 0.00 3.34
7190 10991 0.590195 GGCTGCTTGGATATTCGCTG 59.410 55.000 0.00 0.00 0.00 5.18
7196 10997 1.781429 CTTGGATATTCGCTGTCGACG 59.219 52.381 11.62 7.05 45.43 5.12
7218 11019 3.619233 AAAGTTCACGAAAACGATGGG 57.381 42.857 0.00 0.00 34.27 4.00
7221 11022 3.207778 AGTTCACGAAAACGATGGGAAA 58.792 40.909 0.00 0.00 34.27 3.13
7222 11023 3.250040 AGTTCACGAAAACGATGGGAAAG 59.750 43.478 0.00 0.00 34.27 2.62
7223 11024 2.147958 TCACGAAAACGATGGGAAAGG 58.852 47.619 0.00 0.00 0.00 3.11
7270 11075 6.756542 ACTTGCACAAGATTTTTACCAAGTTC 59.243 34.615 16.95 0.00 38.66 3.01
7285 11090 6.081872 ACCAAGTTCATATACCTAGTACGC 57.918 41.667 0.00 0.00 0.00 4.42
7286 11091 5.595542 ACCAAGTTCATATACCTAGTACGCA 59.404 40.000 0.00 0.00 0.00 5.24
7288 11093 7.449395 ACCAAGTTCATATACCTAGTACGCATA 59.551 37.037 0.00 0.00 0.00 3.14
7289 11094 8.467598 CCAAGTTCATATACCTAGTACGCATAT 58.532 37.037 0.00 0.00 0.00 1.78
7292 11097 9.118300 AGTTCATATACCTAGTACGCATATACC 57.882 37.037 0.00 0.00 0.00 2.73
7321 12679 2.098117 GCAGTAACATGCATGGTCCTTC 59.902 50.000 29.41 11.48 45.77 3.46
7382 12740 1.062525 GGCGCGATGATTTGGTGTC 59.937 57.895 12.10 0.00 0.00 3.67
7398 12756 1.993370 GTGTCGGGATTTCTCAGTTCG 59.007 52.381 0.00 0.00 0.00 3.95
7418 12778 3.513912 TCGTAGTGTCTGAACCCATCAAT 59.486 43.478 0.00 0.00 37.67 2.57
7481 12841 8.682128 TGTTGAACTAGTTAAGCAAAACAAAG 57.318 30.769 8.42 3.87 0.00 2.77
7521 12881 1.966451 AAGCCTAACGTGCAGTGGC 60.966 57.895 8.76 8.76 40.96 5.01
7546 12907 1.963515 AGTTTTGGTAGGTCCGTACGT 59.036 47.619 15.21 0.00 39.52 3.57
7560 12922 2.027073 TACGTCAAGCCAAGCAGCG 61.027 57.895 0.00 0.00 38.01 5.18
7577 12939 1.225745 CGTGACGCGATCCTTTTGC 60.226 57.895 15.93 0.00 44.77 3.68
7581 12943 1.196808 TGACGCGATCCTTTTGCTTTC 59.803 47.619 15.93 0.00 31.94 2.62
7624 12986 3.988517 GACGTGTCTCTTTCCCTTACTTG 59.011 47.826 0.00 0.00 0.00 3.16
7626 12988 3.740115 GTGTCTCTTTCCCTTACTTGCA 58.260 45.455 0.00 0.00 0.00 4.08
7674 13036 3.648339 ACGTTAAGTTCGTTCCAGCTA 57.352 42.857 0.00 0.00 38.38 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.031571 GCAAGACGATTGGCCATCCA 61.032 55.000 6.09 0.00 41.55 3.41
19 20 1.148310 CCGTGACAAGCAAGACGATT 58.852 50.000 0.00 0.00 33.64 3.34
21 22 0.596600 GACCGTGACAAGCAAGACGA 60.597 55.000 0.00 0.00 33.64 4.20
37 38 1.304713 TGGACTCGTGGGGTAGACC 60.305 63.158 0.00 0.00 39.11 3.85
39 40 0.113776 AAGTGGACTCGTGGGGTAGA 59.886 55.000 0.00 0.00 0.00 2.59
60 61 1.004560 CTCTTGGTCGCAGAAGGCA 60.005 57.895 0.00 0.00 45.17 4.75
66 67 0.321671 TTTCCTCCTCTTGGTCGCAG 59.678 55.000 0.00 0.00 34.23 5.18
100 101 1.153409 AGAATGAGCAGCTCGCCAG 60.153 57.895 17.81 0.00 44.04 4.85
119 120 1.891919 TCGTGCCAAACCTGCTGAC 60.892 57.895 0.00 0.00 0.00 3.51
122 123 0.823356 AATGTCGTGCCAAACCTGCT 60.823 50.000 0.00 0.00 0.00 4.24
136 137 3.350219 TCTAGCCCAACCAAGAATGTC 57.650 47.619 0.00 0.00 0.00 3.06
173 174 0.179240 GAAAGCTGTGTCGTCATGCG 60.179 55.000 0.00 3.55 43.01 4.73
180 181 0.597637 ACGTCTGGAAAGCTGTGTCG 60.598 55.000 0.00 0.00 0.00 4.35
181 182 0.861837 CACGTCTGGAAAGCTGTGTC 59.138 55.000 0.00 0.00 0.00 3.67
198 199 1.369091 CGCAAGATGTAGCCCACCAC 61.369 60.000 0.00 0.00 43.02 4.16
207 208 0.953471 GTGTGTGGGCGCAAGATGTA 60.953 55.000 10.83 0.00 43.02 2.29
250 251 0.249657 GTGAGGATGATGAGGGACGC 60.250 60.000 0.00 0.00 0.00 5.19
292 293 2.290367 CGTTGAAGATGCAGTTGTTCCA 59.710 45.455 0.00 0.00 0.00 3.53
294 295 3.545633 GTCGTTGAAGATGCAGTTGTTC 58.454 45.455 0.00 0.00 0.00 3.18
313 314 3.420214 TAACCGATGGCCGCTCGTC 62.420 63.158 21.71 4.69 36.84 4.20
334 335 1.728323 TTGATGGTGGTGGAGAGACA 58.272 50.000 0.00 0.00 0.00 3.41
341 342 1.442769 CTCGTCTTTGATGGTGGTGG 58.557 55.000 0.00 0.00 0.00 4.61
372 373 2.985847 GTTGAGCCGGCCTTTGCT 60.986 61.111 26.15 10.65 41.42 3.91
397 398 5.393027 GCCAACTATCGTGGATGATGTTTTT 60.393 40.000 0.00 0.00 0.00 1.94
414 415 2.160205 CGATCGGATAGAGGCCAACTA 58.840 52.381 7.38 8.95 0.00 2.24
419 420 2.352032 CCCCGATCGGATAGAGGCC 61.352 68.421 35.42 0.00 37.50 5.19
498 518 9.838339 ATTAATAGAAGGAGAGTAACAACATGG 57.162 33.333 0.00 0.00 0.00 3.66
535 555 0.509499 CGTGAATACGCAACGGTTGT 59.491 50.000 20.92 6.02 44.11 3.32
659 679 2.482864 CAACCTTGGCATTTTCACCAC 58.517 47.619 0.00 0.00 35.10 4.16
725 745 3.992636 GCTTGAAGCTGTGATGAGC 57.007 52.632 10.44 0.00 38.45 4.26
873 901 5.038033 GCGGAATAGTTTGACTGTCTCTAG 58.962 45.833 9.51 0.00 0.00 2.43
1153 1210 9.232473 GAAATAATCAAAGTCAAACTAGACCCT 57.768 33.333 0.00 0.00 39.34 4.34
1176 1238 1.558167 TAGGACTGCCGGCCATGAAA 61.558 55.000 26.77 2.02 39.96 2.69
1211 1275 4.229876 GGAGCTAACAAAACAACTGCATC 58.770 43.478 0.00 0.00 0.00 3.91
1212 1276 3.005791 GGGAGCTAACAAAACAACTGCAT 59.994 43.478 0.00 0.00 0.00 3.96
1213 1277 2.360801 GGGAGCTAACAAAACAACTGCA 59.639 45.455 0.00 0.00 0.00 4.41
1214 1278 2.623416 AGGGAGCTAACAAAACAACTGC 59.377 45.455 0.00 0.00 0.00 4.40
1215 1279 3.882888 TGAGGGAGCTAACAAAACAACTG 59.117 43.478 0.00 0.00 0.00 3.16
1216 1280 4.164843 TGAGGGAGCTAACAAAACAACT 57.835 40.909 0.00 0.00 0.00 3.16
1218 1282 5.125417 GCATATGAGGGAGCTAACAAAACAA 59.875 40.000 6.97 0.00 0.00 2.83
1220 1284 4.884164 AGCATATGAGGGAGCTAACAAAAC 59.116 41.667 6.97 0.00 35.19 2.43
1222 1286 4.778213 AGCATATGAGGGAGCTAACAAA 57.222 40.909 6.97 0.00 35.19 2.83
1225 1289 7.751768 AAATTAAGCATATGAGGGAGCTAAC 57.248 36.000 6.97 0.00 36.07 2.34
1356 1429 2.693864 AGGAGGAGGGCATGGTGG 60.694 66.667 0.00 0.00 0.00 4.61
1397 1470 5.631929 TGCATATCGATTAATGGACGTGTAC 59.368 40.000 1.71 0.00 0.00 2.90
1398 1471 5.774630 TGCATATCGATTAATGGACGTGTA 58.225 37.500 1.71 2.20 0.00 2.90
1399 1472 4.627058 TGCATATCGATTAATGGACGTGT 58.373 39.130 1.71 0.00 0.00 4.49
1400 1473 5.784750 ATGCATATCGATTAATGGACGTG 57.215 39.130 1.71 6.04 0.00 4.49
1708 1983 2.158534 AGGCAACAGTGGTGGACAAATA 60.159 45.455 10.86 0.00 41.41 1.40
1713 1988 3.206150 CATATAGGCAACAGTGGTGGAC 58.794 50.000 10.86 0.00 41.41 4.02
1766 2043 2.496871 CTCAGTCTTCTCTGCAGGTCAT 59.503 50.000 15.13 0.00 35.63 3.06
1769 2046 1.265236 CCTCAGTCTTCTCTGCAGGT 58.735 55.000 15.13 0.00 35.63 4.00
1780 2057 4.661247 AAGGTAGACACTACCTCAGTCT 57.339 45.455 24.57 10.80 46.52 3.24
2176 2454 8.524487 ACTAAGAGCTGATTATACCCGAATAAG 58.476 37.037 0.00 0.00 0.00 1.73
2232 2510 6.018588 GGTGCGCACAAGTACATAATTACATA 60.019 38.462 38.60 0.00 0.00 2.29
2233 2511 5.220777 GGTGCGCACAAGTACATAATTACAT 60.221 40.000 38.60 0.00 0.00 2.29
2234 2512 4.093703 GGTGCGCACAAGTACATAATTACA 59.906 41.667 38.60 0.00 0.00 2.41
2235 2513 4.584394 GGTGCGCACAAGTACATAATTAC 58.416 43.478 38.60 14.71 0.00 1.89
2236 2514 3.307512 CGGTGCGCACAAGTACATAATTA 59.692 43.478 38.60 0.00 0.00 1.40
2237 2515 2.095213 CGGTGCGCACAAGTACATAATT 59.905 45.455 38.60 0.00 0.00 1.40
2238 2516 1.663643 CGGTGCGCACAAGTACATAAT 59.336 47.619 38.60 0.00 0.00 1.28
2239 2517 1.072391 CGGTGCGCACAAGTACATAA 58.928 50.000 38.60 0.00 0.00 1.90
2318 2602 4.443034 GCCTGAATAGACCGACTAACCAAT 60.443 45.833 0.00 0.00 34.56 3.16
2319 2603 3.118884 GCCTGAATAGACCGACTAACCAA 60.119 47.826 0.00 0.00 34.56 3.67
2351 2635 4.977963 CCTATTTTCAGCAACAACACACAG 59.022 41.667 0.00 0.00 0.00 3.66
2361 2645 5.385198 GGATATGACCCCTATTTTCAGCAA 58.615 41.667 0.00 0.00 0.00 3.91
2452 2743 4.941263 TGCATGGAGTAGTTTGGTATTGTC 59.059 41.667 0.00 0.00 0.00 3.18
2459 2750 3.820467 TCAAGTTGCATGGAGTAGTTTGG 59.180 43.478 0.00 0.00 0.00 3.28
2461 2752 4.973168 TCTCAAGTTGCATGGAGTAGTTT 58.027 39.130 0.00 0.00 0.00 2.66
2467 2758 5.481200 CTTGTATCTCAAGTTGCATGGAG 57.519 43.478 0.00 0.00 45.89 3.86
2491 2782 9.073475 TGCCTTTTGTTTAACTTGTATCTACAT 57.927 29.630 0.00 0.00 35.89 2.29
2492 2783 8.453238 TGCCTTTTGTTTAACTTGTATCTACA 57.547 30.769 0.00 0.00 0.00 2.74
2493 2784 8.780249 TCTGCCTTTTGTTTAACTTGTATCTAC 58.220 33.333 0.00 0.00 0.00 2.59
2494 2785 8.780249 GTCTGCCTTTTGTTTAACTTGTATCTA 58.220 33.333 0.00 0.00 0.00 1.98
2495 2786 7.284489 TGTCTGCCTTTTGTTTAACTTGTATCT 59.716 33.333 0.00 0.00 0.00 1.98
2496 2787 7.422399 TGTCTGCCTTTTGTTTAACTTGTATC 58.578 34.615 0.00 0.00 0.00 2.24
2497 2788 7.341445 TGTCTGCCTTTTGTTTAACTTGTAT 57.659 32.000 0.00 0.00 0.00 2.29
2498 2789 6.761099 TGTCTGCCTTTTGTTTAACTTGTA 57.239 33.333 0.00 0.00 0.00 2.41
2499 2790 5.652994 TGTCTGCCTTTTGTTTAACTTGT 57.347 34.783 0.00 0.00 0.00 3.16
2500 2791 7.199766 TGTATGTCTGCCTTTTGTTTAACTTG 58.800 34.615 0.00 0.00 0.00 3.16
2501 2792 7.341445 TGTATGTCTGCCTTTTGTTTAACTT 57.659 32.000 0.00 0.00 0.00 2.66
2502 2793 6.952773 TGTATGTCTGCCTTTTGTTTAACT 57.047 33.333 0.00 0.00 0.00 2.24
2503 2794 6.089417 GCATGTATGTCTGCCTTTTGTTTAAC 59.911 38.462 0.00 0.00 32.15 2.01
2504 2795 6.155827 GCATGTATGTCTGCCTTTTGTTTAA 58.844 36.000 0.00 0.00 32.15 1.52
2505 2796 5.242615 TGCATGTATGTCTGCCTTTTGTTTA 59.757 36.000 0.00 0.00 37.59 2.01
2592 2887 2.043405 TGTGTGTGTGTGTGGTGGC 61.043 57.895 0.00 0.00 0.00 5.01
2736 4391 2.338785 GCCAAGCTGGAGTCTTGCC 61.339 63.158 6.40 0.00 40.96 4.52
2850 4533 2.466982 CGCCGCAGTTGCATCAGAT 61.467 57.895 4.84 0.00 42.21 2.90
2988 5772 5.463061 AGCATGTGATTAAACAAGTTTGCAC 59.537 36.000 8.37 12.56 35.67 4.57
3046 5830 0.163788 GTGTCAGTGACGCAAATCGG 59.836 55.000 27.78 0.00 41.96 4.18
3121 6446 3.146066 ACCTTCCTGTGTACGTAACGTA 58.854 45.455 0.00 0.00 41.54 3.57
3122 6447 1.956477 ACCTTCCTGTGTACGTAACGT 59.044 47.619 0.00 0.00 44.35 3.99
3123 6448 2.030893 TGACCTTCCTGTGTACGTAACG 60.031 50.000 0.00 0.00 0.00 3.18
3124 6449 3.648339 TGACCTTCCTGTGTACGTAAC 57.352 47.619 0.00 0.00 0.00 2.50
3125 6450 3.119743 CGATGACCTTCCTGTGTACGTAA 60.120 47.826 0.00 0.00 0.00 3.18
3157 6486 0.248539 CTCGTACGCCTTGAGGTAGC 60.249 60.000 11.24 0.00 37.57 3.58
3471 6800 3.171388 GGTGGCCCCGATGGAGAT 61.171 66.667 0.00 0.00 35.39 2.75
3608 6937 1.743623 TATCCACGGCGCAAGGTTG 60.744 57.895 10.83 0.00 38.28 3.77
3715 7044 3.805823 ACGTTACGTGACATGCAAATTC 58.194 40.909 10.39 0.00 39.18 2.17
3718 7047 2.153437 CGTACGTTACGTGACATGCAAA 59.847 45.455 21.22 0.00 46.41 3.68
3758 7088 6.035650 TCTCGCGTCAGTCCATTTTTATTTAG 59.964 38.462 5.77 0.00 0.00 1.85
3759 7089 5.870433 TCTCGCGTCAGTCCATTTTTATTTA 59.130 36.000 5.77 0.00 0.00 1.40
3760 7090 4.693566 TCTCGCGTCAGTCCATTTTTATTT 59.306 37.500 5.77 0.00 0.00 1.40
3764 7097 2.163818 TCTCGCGTCAGTCCATTTTT 57.836 45.000 5.77 0.00 0.00 1.94
3781 7114 6.992715 CCCTGATATGAAAGAACGGTAAATCT 59.007 38.462 0.00 0.00 0.00 2.40
3792 7125 4.019681 ACCGTTTGTCCCTGATATGAAAGA 60.020 41.667 0.00 0.00 0.00 2.52
3855 7188 1.875963 GGCGTGTGCTGCATAAACT 59.124 52.632 5.27 0.00 42.25 2.66
3889 7222 0.950071 TACTTGGTAACGTTGGCGGC 60.950 55.000 11.99 0.00 43.45 6.53
3933 7463 8.731605 TGACTCTTCAGTGATTGTTACTACTAG 58.268 37.037 0.00 0.00 30.63 2.57
3951 7487 4.486090 TCGATTAGCAAGTGTGACTCTTC 58.514 43.478 0.00 0.00 0.00 2.87
4206 7742 2.105134 TGAGGATGGTGTTAACGTTGGT 59.895 45.455 11.99 0.00 0.00 3.67
4209 7745 4.081322 ACTTGAGGATGGTGTTAACGTT 57.919 40.909 5.88 5.88 0.00 3.99
4214 7750 7.913789 AGTTTATGTACTTGAGGATGGTGTTA 58.086 34.615 0.00 0.00 0.00 2.41
4235 7773 0.472471 TTGGGTTCGAGCTGGAGTTT 59.528 50.000 0.00 0.00 0.00 2.66
4245 7783 1.004679 GGTAAGCGGTTGGGTTCGA 60.005 57.895 10.73 0.00 37.56 3.71
4268 7806 3.432588 ACGACTGTCCTCGAGCGG 61.433 66.667 6.99 1.77 37.11 5.52
4301 7839 2.031919 AACTGCGCCATCAACGGA 59.968 55.556 4.18 0.00 0.00 4.69
4305 7843 1.005037 ACGAGAACTGCGCCATCAA 60.005 52.632 4.18 0.00 0.00 2.57
4486 8048 3.512516 GCCGCCAGGATGTTCAGC 61.513 66.667 0.00 0.00 41.02 4.26
4615 8177 1.194781 GGTGGGCTGACTTGAGGAGA 61.195 60.000 0.00 0.00 0.00 3.71
4699 8261 4.617253 AAAAGGCATTACCCAAGTTTCC 57.383 40.909 0.00 0.00 40.58 3.13
4732 8312 0.600782 AAATGACGTTGCGTACCGGT 60.601 50.000 13.98 13.98 41.37 5.28
4733 8313 0.179235 CAAATGACGTTGCGTACCGG 60.179 55.000 0.00 0.00 41.37 5.28
4735 8315 4.085884 CAATACAAATGACGTTGCGTACC 58.914 43.478 0.00 0.00 41.37 3.34
4736 8316 4.085884 CCAATACAAATGACGTTGCGTAC 58.914 43.478 0.00 0.00 41.37 3.67
4746 8326 4.220382 CAGAACTTGGCCCAATACAAATGA 59.780 41.667 0.00 0.00 0.00 2.57
4770 8355 8.996271 GCATTCTCAATCAAAGGAAAAGAAAAT 58.004 29.630 0.00 0.00 0.00 1.82
4776 8361 7.716123 ACAATTGCATTCTCAATCAAAGGAAAA 59.284 29.630 5.05 0.00 35.77 2.29
4780 8365 5.929992 ACACAATTGCATTCTCAATCAAAGG 59.070 36.000 5.05 0.00 35.77 3.11
4799 8384 3.566322 CCCAAACCGAAATCACTACACAA 59.434 43.478 0.00 0.00 0.00 3.33
4801 8386 3.404899 TCCCAAACCGAAATCACTACAC 58.595 45.455 0.00 0.00 0.00 2.90
4802 8387 3.670625 CTCCCAAACCGAAATCACTACA 58.329 45.455 0.00 0.00 0.00 2.74
4804 8389 2.039216 TGCTCCCAAACCGAAATCACTA 59.961 45.455 0.00 0.00 0.00 2.74
4808 8393 1.886542 AGTTGCTCCCAAACCGAAATC 59.113 47.619 0.00 0.00 31.68 2.17
4809 8394 1.995376 AGTTGCTCCCAAACCGAAAT 58.005 45.000 0.00 0.00 31.68 2.17
4810 8395 2.158726 ACTAGTTGCTCCCAAACCGAAA 60.159 45.455 0.00 0.00 31.68 3.46
4811 8396 1.418637 ACTAGTTGCTCCCAAACCGAA 59.581 47.619 0.00 0.00 31.68 4.30
4812 8397 1.053424 ACTAGTTGCTCCCAAACCGA 58.947 50.000 0.00 0.00 31.68 4.69
4813 8398 1.892209 AACTAGTTGCTCCCAAACCG 58.108 50.000 7.48 0.00 31.68 4.44
4814 8399 3.187842 CGTTAACTAGTTGCTCCCAAACC 59.812 47.826 18.56 0.00 31.68 3.27
4815 8400 4.060205 TCGTTAACTAGTTGCTCCCAAAC 58.940 43.478 18.56 11.05 31.68 2.93
4816 8401 4.312443 CTCGTTAACTAGTTGCTCCCAAA 58.688 43.478 18.56 0.00 31.68 3.28
4817 8402 3.863400 GCTCGTTAACTAGTTGCTCCCAA 60.863 47.826 18.56 0.09 0.00 4.12
4818 8403 2.353406 GCTCGTTAACTAGTTGCTCCCA 60.353 50.000 18.56 0.00 0.00 4.37
4849 8434 1.140589 CTGATCGTTGCGAGGCTCT 59.859 57.895 13.50 0.00 39.91 4.09
4879 8464 3.934684 GCGAATGGCTGAGAGCGC 61.935 66.667 0.00 0.00 43.62 5.92
4930 8524 3.362237 CGAAAACGCATGCGGAAAAATAA 59.638 39.130 39.95 0.00 44.69 1.40
4931 8525 2.911723 CGAAAACGCATGCGGAAAAATA 59.088 40.909 39.95 0.00 44.69 1.40
4939 8533 1.274798 AAAAGCCGAAAACGCATGCG 61.275 50.000 36.79 36.79 46.03 4.73
4943 8537 2.530700 CGTTTAAAAAGCCGAAAACGCA 59.469 40.909 6.30 0.00 44.94 5.24
4973 8567 2.565210 ACCAAAACGTCGAAAAACCC 57.435 45.000 0.00 0.00 0.00 4.11
4974 8568 4.201608 GGAAAACCAAAACGTCGAAAAACC 60.202 41.667 0.00 0.00 0.00 3.27
5680 9397 4.697756 CCGAAAGAGGCACGCCCA 62.698 66.667 3.95 0.00 36.58 5.36
5903 9636 7.505923 TCGAGATCTTCAAAACTAGATCCCATA 59.494 37.037 0.00 0.00 38.24 2.74
5941 9674 6.642707 AATCTCAAACCGTTTTCACCATTA 57.357 33.333 0.00 0.00 0.00 1.90
5970 9703 8.585436 CAAAACGTTTTATTTCTTAAACCGTGT 58.415 29.630 24.79 0.00 44.82 4.49
6029 9762 0.030504 CGCCACTTGTTGCAACATGA 59.969 50.000 37.64 23.38 38.95 3.07
6032 9765 2.103934 GCGCCACTTGTTGCAACA 59.896 55.556 27.96 27.96 37.08 3.33
6038 9771 1.671054 ATACAGCGCGCCACTTGTT 60.671 52.632 30.33 12.88 0.00 2.83
6118 9851 4.621034 CACAACCGAAATCACCAATTAAGC 59.379 41.667 0.00 0.00 0.00 3.09
6119 9852 4.621034 GCACAACCGAAATCACCAATTAAG 59.379 41.667 0.00 0.00 0.00 1.85
6120 9853 4.551388 GCACAACCGAAATCACCAATTAA 58.449 39.130 0.00 0.00 0.00 1.40
6121 9854 3.365465 CGCACAACCGAAATCACCAATTA 60.365 43.478 0.00 0.00 0.00 1.40
6122 9855 2.606795 CGCACAACCGAAATCACCAATT 60.607 45.455 0.00 0.00 0.00 2.32
6123 9856 1.068610 CGCACAACCGAAATCACCAAT 60.069 47.619 0.00 0.00 0.00 3.16
6124 9857 0.309302 CGCACAACCGAAATCACCAA 59.691 50.000 0.00 0.00 0.00 3.67
6125 9858 0.816018 ACGCACAACCGAAATCACCA 60.816 50.000 0.00 0.00 0.00 4.17
6126 9859 0.385473 CACGCACAACCGAAATCACC 60.385 55.000 0.00 0.00 0.00 4.02
6127 9860 0.306533 ACACGCACAACCGAAATCAC 59.693 50.000 0.00 0.00 0.00 3.06
6128 9861 0.306228 CACACGCACAACCGAAATCA 59.694 50.000 0.00 0.00 0.00 2.57
6129 9862 0.306533 ACACACGCACAACCGAAATC 59.693 50.000 0.00 0.00 0.00 2.17
6130 9863 0.306533 GACACACGCACAACCGAAAT 59.693 50.000 0.00 0.00 0.00 2.17
6131 9864 1.716760 GACACACGCACAACCGAAA 59.283 52.632 0.00 0.00 0.00 3.46
6132 9865 2.518312 CGACACACGCACAACCGAA 61.518 57.895 0.00 0.00 34.51 4.30
6133 9866 2.957489 CGACACACGCACAACCGA 60.957 61.111 0.00 0.00 34.51 4.69
6134 9867 2.299294 AAACGACACACGCACAACCG 62.299 55.000 0.00 0.00 46.94 4.44
6135 9868 0.179184 AAAACGACACACGCACAACC 60.179 50.000 0.00 0.00 46.94 3.77
6136 9869 1.608822 AAAAACGACACACGCACAAC 58.391 45.000 0.00 0.00 46.94 3.32
6137 9870 2.159037 TGTAAAAACGACACACGCACAA 59.841 40.909 0.00 0.00 46.94 3.33
6378 10111 2.097825 GGAAGGGTAGTTGAGCTCGTA 58.902 52.381 9.64 0.00 0.00 3.43
6470 10203 1.216977 CACGGCGACCCTGTAATGA 59.783 57.895 16.62 0.00 0.00 2.57
6545 10278 0.335361 AGCTCTTCTTCTCCCCGGTA 59.665 55.000 0.00 0.00 0.00 4.02
6580 10313 1.186267 ACTTCTCTTCCCCGTCGCTT 61.186 55.000 0.00 0.00 0.00 4.68
6760 10536 5.230942 AGTTTTGACTGGTGACTTCGATAG 58.769 41.667 0.00 0.00 0.00 2.08
6761 10537 5.209818 AGTTTTGACTGGTGACTTCGATA 57.790 39.130 0.00 0.00 0.00 2.92
6762 10538 4.073293 AGTTTTGACTGGTGACTTCGAT 57.927 40.909 0.00 0.00 0.00 3.59
6763 10539 3.536956 AGTTTTGACTGGTGACTTCGA 57.463 42.857 0.00 0.00 0.00 3.71
6764 10540 4.369182 AGTAGTTTTGACTGGTGACTTCG 58.631 43.478 0.00 0.00 0.00 3.79
6765 10541 4.750598 GGAGTAGTTTTGACTGGTGACTTC 59.249 45.833 0.00 0.00 0.00 3.01
6766 10542 4.704965 GGAGTAGTTTTGACTGGTGACTT 58.295 43.478 0.00 0.00 0.00 3.01
6767 10543 3.243771 CGGAGTAGTTTTGACTGGTGACT 60.244 47.826 0.00 0.00 0.00 3.41
6768 10544 3.057734 CGGAGTAGTTTTGACTGGTGAC 58.942 50.000 0.00 0.00 0.00 3.67
6769 10545 2.696707 ACGGAGTAGTTTTGACTGGTGA 59.303 45.455 0.00 0.00 41.94 4.02
6770 10546 3.107642 ACGGAGTAGTTTTGACTGGTG 57.892 47.619 0.00 0.00 41.94 4.17
6771 10547 4.804133 ACGACGGAGTAGTTTTGACTGGT 61.804 47.826 0.00 0.00 45.94 4.00
6772 10548 2.288030 ACGACGGAGTAGTTTTGACTGG 60.288 50.000 0.00 0.00 45.94 4.00
6773 10549 3.009301 ACGACGGAGTAGTTTTGACTG 57.991 47.619 0.00 0.00 45.94 3.51
6948 10735 1.573932 CGCGCAGTTTGGACAATGA 59.426 52.632 8.75 0.00 0.00 2.57
6992 10779 0.386476 TCGTGTTGGCGTGAACTACT 59.614 50.000 0.00 0.00 0.00 2.57
7073 10860 2.583101 TCCTGTGATCCTGGACTCTAGT 59.417 50.000 0.00 0.00 36.35 2.57
7089 10876 2.706190 GTGGGCTCTTGGTATATCCTGT 59.294 50.000 0.00 0.00 37.07 4.00
7102 10889 2.184322 CGTACATGCGTGGGCTCT 59.816 61.111 11.36 0.00 40.82 4.09
7158 10957 3.572584 CAAGCAGCCTCTGAATTTTCAC 58.427 45.455 0.00 0.00 32.44 3.18
7170 10969 0.471617 AGCGAATATCCAAGCAGCCT 59.528 50.000 0.00 0.00 0.00 4.58
7187 10986 1.121967 CGTGAACTTTACGTCGACAGC 59.878 52.381 17.16 0.00 36.83 4.40
7190 10991 4.188950 GTTTTCGTGAACTTTACGTCGAC 58.811 43.478 5.18 5.18 41.91 4.20
7196 10997 4.211794 TCCCATCGTTTTCGTGAACTTTAC 59.788 41.667 3.08 0.00 44.46 2.01
7218 11019 2.206576 AAGTGGAGCATCACCCTTTC 57.793 50.000 5.93 0.00 38.34 2.62
7221 11022 0.773644 ACAAAGTGGAGCATCACCCT 59.226 50.000 5.93 0.00 38.34 4.34
7222 11023 2.489938 TACAAAGTGGAGCATCACCC 57.510 50.000 5.93 0.00 38.34 4.61
7223 11024 4.009675 TGAATACAAAGTGGAGCATCACC 58.990 43.478 5.93 0.00 38.34 4.02
7270 11075 9.775854 ACTAGGTATATGCGTACTAGGTATATG 57.224 37.037 11.66 0.00 0.00 1.78
7280 11085 5.180868 ACTGCAGTACTAGGTATATGCGTAC 59.819 44.000 20.16 0.00 36.81 3.67
7283 11088 4.768130 ACTGCAGTACTAGGTATATGCG 57.232 45.455 20.16 0.00 36.81 4.73
7284 11089 6.978338 TGTTACTGCAGTACTAGGTATATGC 58.022 40.000 26.02 0.00 35.56 3.14
7285 11090 7.542477 GCATGTTACTGCAGTACTAGGTATATG 59.458 40.741 26.02 21.58 41.87 1.78
7286 11091 7.232737 TGCATGTTACTGCAGTACTAGGTATAT 59.767 37.037 26.02 11.18 46.76 0.86
7288 11093 5.362717 TGCATGTTACTGCAGTACTAGGTAT 59.637 40.000 26.02 11.00 46.76 2.73
7289 11094 4.707934 TGCATGTTACTGCAGTACTAGGTA 59.292 41.667 26.02 15.38 46.76 3.08
7382 12740 3.179830 CACTACGAACTGAGAAATCCCG 58.820 50.000 0.00 0.00 0.00 5.14
7398 12756 6.170506 TGTTATTGATGGGTTCAGACACTAC 58.829 40.000 0.00 0.00 35.27 2.73
7481 12841 3.192922 GGCGGGACATACGTGTGC 61.193 66.667 12.67 5.28 44.99 4.57
7504 12864 2.358737 GCCACTGCACGTTAGGCT 60.359 61.111 0.00 0.00 42.01 4.58
7521 12881 1.535462 CGGACCTACCAAAACTGCAAG 59.465 52.381 0.00 0.00 38.90 4.01
7546 12907 2.110835 TCACGCTGCTTGGCTTGA 59.889 55.556 6.28 3.07 37.98 3.02
7560 12922 0.517316 AAGCAAAAGGATCGCGTCAC 59.483 50.000 5.77 0.00 0.00 3.67
7577 12939 1.335496 TCCAAGGCCGAAAAACGAAAG 59.665 47.619 0.00 0.00 45.77 2.62
7581 12943 3.127895 TCAATATCCAAGGCCGAAAAACG 59.872 43.478 0.00 0.00 42.18 3.60
7624 12986 2.813754 TGTCAATCAACCAGCTAACTGC 59.186 45.455 0.00 0.00 43.02 4.40
7626 12988 4.357918 AGTGTCAATCAACCAGCTAACT 57.642 40.909 0.00 0.00 0.00 2.24
7674 13036 4.988598 CACTTCACACGCCCGCCT 62.989 66.667 0.00 0.00 0.00 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.