Multiple sequence alignment - TraesCS3D01G271900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G271900 chr3D 100.000 5039 0 0 1 5039 376926770 376921732 0.000000e+00 9306.0
1 TraesCS3D01G271900 chr3D 97.826 184 4 0 2949 3132 153512220 153512403 8.140000e-83 318.0
2 TraesCS3D01G271900 chr3D 93.785 177 11 0 2738 2914 496740126 496739950 2.990000e-67 267.0
3 TraesCS3D01G271900 chr3D 93.678 174 9 2 2731 2903 310191223 310191395 5.000000e-65 259.0
4 TraesCS3D01G271900 chr3D 89.362 141 15 0 2600 2740 314128711 314128571 1.440000e-40 178.0
5 TraesCS3D01G271900 chr3D 89.855 138 14 0 2600 2737 604609779 604609916 1.440000e-40 178.0
6 TraesCS3D01G271900 chr3D 95.652 46 1 1 2907 2951 556631268 556631313 7.000000e-09 73.1
7 TraesCS3D01G271900 chr3A 95.042 2158 83 12 2901 5039 501654452 501652300 0.000000e+00 3371.0
8 TraesCS3D01G271900 chr3A 97.000 1900 39 9 857 2740 501656348 501654451 0.000000e+00 3177.0
9 TraesCS3D01G271900 chr3A 85.276 326 40 6 401 720 501657820 501657497 3.760000e-86 329.0
10 TraesCS3D01G271900 chr3A 93.269 208 9 5 2928 3132 555313632 555313427 8.200000e-78 302.0
11 TraesCS3D01G271900 chr3A 92.647 68 5 0 3131 3198 9747643 9747710 1.150000e-16 99.0
12 TraesCS3D01G271900 chr3A 95.122 41 2 0 2907 2947 571174341 571174301 1.170000e-06 65.8
13 TraesCS3D01G271900 chr3B 95.399 1869 46 12 765 2603 491536368 491534510 0.000000e+00 2939.0
14 TraesCS3D01G271900 chr3B 95.997 1249 41 6 3197 4444 491534513 491533273 0.000000e+00 2021.0
15 TraesCS3D01G271900 chr3B 93.154 409 19 3 1 400 302956958 302956550 4.340000e-165 592.0
16 TraesCS3D01G271900 chr3B 90.050 402 26 11 4473 4863 491533275 491532877 4.500000e-140 508.0
17 TraesCS3D01G271900 chr3B 87.043 301 33 4 401 695 491536890 491536590 8.080000e-88 335.0
18 TraesCS3D01G271900 chr3B 90.710 183 14 2 4859 5039 491524757 491524576 1.810000e-59 241.0
19 TraesCS3D01G271900 chr5B 94.402 393 22 0 8 400 527557755 527558147 5.580000e-169 604.0
20 TraesCS3D01G271900 chr5B 95.876 194 6 2 2952 3144 404328644 404328452 3.790000e-81 313.0
21 TraesCS3D01G271900 chr5B 90.625 128 9 3 3029 3155 512583787 512583662 3.120000e-37 167.0
22 TraesCS3D01G271900 chr5B 78.534 191 25 9 4623 4797 6420997 6421187 1.480000e-20 111.0
23 TraesCS3D01G271900 chr7B 93.199 397 25 2 5 400 17783578 17783973 2.610000e-162 582.0
24 TraesCS3D01G271900 chr7B 93.199 397 25 2 5 400 17789369 17789764 2.610000e-162 582.0
25 TraesCS3D01G271900 chr7B 86.806 144 17 2 2593 2736 36460290 36460149 5.220000e-35 159.0
26 TraesCS3D01G271900 chr2A 91.971 411 25 5 5 412 324054695 324055100 2.040000e-158 569.0
27 TraesCS3D01G271900 chr2A 92.695 397 23 3 5 400 267234323 267233932 7.320000e-158 568.0
28 TraesCS3D01G271900 chr2A 92.695 397 23 3 5 400 277859946 277859555 7.320000e-158 568.0
29 TraesCS3D01G271900 chr2A 94.737 171 9 0 2736 2906 628342204 628342374 2.990000e-67 267.0
30 TraesCS3D01G271900 chr2A 87.234 141 18 0 2600 2740 705484207 705484067 1.450000e-35 161.0
31 TraesCS3D01G271900 chr1B 92.714 398 23 3 5 401 336378595 336378987 2.040000e-158 569.0
32 TraesCS3D01G271900 chr1B 87.755 147 17 1 2594 2740 283698430 283698285 2.410000e-38 171.0
33 TraesCS3D01G271900 chr7D 92.269 401 29 2 1 400 132236164 132236563 7.320000e-158 568.0
34 TraesCS3D01G271900 chr7D 96.341 164 6 0 2739 2902 228456884 228456721 2.310000e-68 270.0
35 TraesCS3D01G271900 chr7D 95.238 168 8 0 2739 2906 327375579 327375412 2.990000e-67 267.0
36 TraesCS3D01G271900 chr7D 80.631 222 36 4 546 766 269695306 269695091 1.120000e-36 165.0
37 TraesCS3D01G271900 chr7D 88.571 70 8 0 3131 3200 628606122 628606191 8.990000e-13 86.1
38 TraesCS3D01G271900 chr7D 90.385 52 4 1 2901 2951 619816122 619816173 3.260000e-07 67.6
39 TraesCS3D01G271900 chr6A 97.354 189 4 1 2948 3136 605361400 605361587 2.260000e-83 320.0
40 TraesCS3D01G271900 chrUn 97.326 187 3 2 2953 3138 395339962 395339777 2.930000e-82 316.0
41 TraesCS3D01G271900 chrUn 79.535 215 40 4 546 756 337012200 337012414 3.140000e-32 150.0
42 TraesCS3D01G271900 chr2B 95.050 202 8 2 2932 3132 121669494 121669694 2.930000e-82 316.0
43 TraesCS3D01G271900 chr2B 93.678 174 9 2 2739 2911 751258295 751258467 5.000000e-65 259.0
44 TraesCS3D01G271900 chr2B 90.278 72 7 0 3131 3202 305325428 305325357 1.490000e-15 95.3
45 TraesCS3D01G271900 chr2B 88.889 72 6 2 3131 3202 305325825 305325756 2.500000e-13 87.9
46 TraesCS3D01G271900 chr2B 88.571 70 8 0 3131 3200 799706161 799706092 8.990000e-13 86.1
47 TraesCS3D01G271900 chr2B 90.244 41 3 1 4744 4783 730645131 730645091 9.000000e-03 52.8
48 TraesCS3D01G271900 chr1A 97.326 187 4 1 2949 3134 557921021 557920835 2.930000e-82 316.0
49 TraesCS3D01G271900 chr1A 94.643 168 7 2 2739 2905 592833973 592833807 5.000000e-65 259.0
50 TraesCS3D01G271900 chr2D 91.928 223 13 5 2927 3144 173536172 173535950 1.760000e-79 307.0
51 TraesCS3D01G271900 chr2D 90.278 72 7 0 3131 3202 261736226 261736297 1.490000e-15 95.3
52 TraesCS3D01G271900 chr2D 88.889 72 8 0 3131 3202 332489892 332489963 6.950000e-14 89.8
53 TraesCS3D01G271900 chr2D 92.308 52 3 1 2901 2951 11542263 11542314 7.000000e-09 73.1
54 TraesCS3D01G271900 chr4D 95.732 164 7 0 2739 2902 216792656 216792819 1.080000e-66 265.0
55 TraesCS3D01G271900 chr4D 89.313 131 14 0 2601 2731 43054305 43054435 1.120000e-36 165.0
56 TraesCS3D01G271900 chr1D 95.210 167 8 0 2739 2905 463000157 462999991 1.080000e-66 265.0
57 TraesCS3D01G271900 chr1D 89.552 67 4 3 3090 3153 41109205 41109271 1.160000e-11 82.4
58 TraesCS3D01G271900 chr4B 88.889 153 15 2 546 696 460154685 460154837 2.400000e-43 187.0
59 TraesCS3D01G271900 chr4B 83.234 167 24 4 2618 2780 460780820 460780986 3.140000e-32 150.0
60 TraesCS3D01G271900 chr5D 82.412 199 34 1 546 743 432193934 432194132 6.710000e-39 172.0
61 TraesCS3D01G271900 chr5D 79.630 216 43 1 546 760 474206195 474205980 2.430000e-33 154.0
62 TraesCS3D01G271900 chr5D 86.667 75 10 0 3131 3205 433333285 433333211 3.230000e-12 84.2
63 TraesCS3D01G271900 chr5D 95.745 47 0 2 2907 2951 460749792 460749746 1.950000e-09 75.0
64 TraesCS3D01G271900 chr6B 85.542 166 21 3 552 715 2885105 2885269 2.410000e-38 171.0
65 TraesCS3D01G271900 chr6B 90.385 52 3 2 2902 2951 161437848 161437797 3.260000e-07 67.6
66 TraesCS3D01G271900 chr4A 87.857 140 17 0 2601 2740 556840537 556840398 1.120000e-36 165.0
67 TraesCS3D01G271900 chr5A 82.105 190 33 1 554 742 547289801 547289990 1.450000e-35 161.0
68 TraesCS3D01G271900 chr5A 81.752 137 17 7 4668 4797 3413429 3413564 1.920000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G271900 chr3D 376921732 376926770 5038 True 9306.000000 9306 100.000000 1 5039 1 chr3D.!!$R2 5038
1 TraesCS3D01G271900 chr3A 501652300 501657820 5520 True 2292.333333 3371 92.439333 401 5039 3 chr3A.!!$R3 4638
2 TraesCS3D01G271900 chr3B 491532877 491536890 4013 True 1450.750000 2939 92.122250 401 4863 4 chr3B.!!$R3 4462

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
759 928 0.034059 CTGATCCCCTGTCCGCATAC 59.966 60.0 0.0 0.0 0.0 2.39 F
2388 3598 0.333993 ATGTGGCTTTCTGGGATGCT 59.666 50.0 0.0 0.0 0.0 3.79 F
2754 3964 0.337082 TGATACTCCCTCCGTTCCCA 59.663 55.0 0.0 0.0 0.0 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2626 3836 0.958876 GGCACAAAGTACGAAGGGGG 60.959 60.000 0.00 0.0 0.00 5.40 R
4018 5229 1.278985 TCATGCCGTGGAAGAATCTGT 59.721 47.619 0.00 0.0 0.00 3.41 R
4739 5968 2.260844 TGGTCTTCTGCAGTTTCTGG 57.739 50.000 14.67 0.0 31.21 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.715737 GCGTCTAGCCCTAGAGATTG 57.284 55.000 5.30 0.00 42.31 2.67
29 30 1.957877 GCGTCTAGCCCTAGAGATTGT 59.042 52.381 5.30 0.00 42.31 2.71
30 31 2.362717 GCGTCTAGCCCTAGAGATTGTT 59.637 50.000 5.30 0.00 42.31 2.83
31 32 3.181474 GCGTCTAGCCCTAGAGATTGTTT 60.181 47.826 5.30 0.00 42.31 2.83
32 33 4.612943 CGTCTAGCCCTAGAGATTGTTTC 58.387 47.826 5.30 0.00 42.31 2.78
33 34 4.339814 CGTCTAGCCCTAGAGATTGTTTCT 59.660 45.833 5.30 0.00 42.31 2.52
34 35 5.163499 CGTCTAGCCCTAGAGATTGTTTCTT 60.163 44.000 5.30 0.00 42.31 2.52
35 36 6.277605 GTCTAGCCCTAGAGATTGTTTCTTC 58.722 44.000 5.30 0.00 42.31 2.87
36 37 6.097696 GTCTAGCCCTAGAGATTGTTTCTTCT 59.902 42.308 5.30 0.00 42.31 2.85
37 38 5.770685 AGCCCTAGAGATTGTTTCTTCTT 57.229 39.130 0.00 0.00 33.74 2.52
38 39 5.495640 AGCCCTAGAGATTGTTTCTTCTTG 58.504 41.667 0.00 0.00 33.74 3.02
39 40 4.095632 GCCCTAGAGATTGTTTCTTCTTGC 59.904 45.833 0.00 0.00 33.74 4.01
40 41 5.495640 CCCTAGAGATTGTTTCTTCTTGCT 58.504 41.667 0.00 0.00 33.74 3.91
41 42 5.942826 CCCTAGAGATTGTTTCTTCTTGCTT 59.057 40.000 0.00 0.00 33.74 3.91
42 43 6.128063 CCCTAGAGATTGTTTCTTCTTGCTTG 60.128 42.308 0.00 0.00 33.74 4.01
43 44 6.429385 CCTAGAGATTGTTTCTTCTTGCTTGT 59.571 38.462 0.00 0.00 33.74 3.16
44 45 6.311055 AGAGATTGTTTCTTCTTGCTTGTC 57.689 37.500 0.00 0.00 33.74 3.18
45 46 5.240403 AGAGATTGTTTCTTCTTGCTTGTCC 59.760 40.000 0.00 0.00 33.74 4.02
46 47 4.279420 AGATTGTTTCTTCTTGCTTGTCCC 59.721 41.667 0.00 0.00 0.00 4.46
47 48 3.297134 TGTTTCTTCTTGCTTGTCCCT 57.703 42.857 0.00 0.00 0.00 4.20
48 49 3.214328 TGTTTCTTCTTGCTTGTCCCTC 58.786 45.455 0.00 0.00 0.00 4.30
49 50 3.117888 TGTTTCTTCTTGCTTGTCCCTCT 60.118 43.478 0.00 0.00 0.00 3.69
50 51 3.864789 TTCTTCTTGCTTGTCCCTCTT 57.135 42.857 0.00 0.00 0.00 2.85
51 52 3.864789 TCTTCTTGCTTGTCCCTCTTT 57.135 42.857 0.00 0.00 0.00 2.52
52 53 3.480470 TCTTCTTGCTTGTCCCTCTTTG 58.520 45.455 0.00 0.00 0.00 2.77
53 54 2.276732 TCTTGCTTGTCCCTCTTTGG 57.723 50.000 0.00 0.00 0.00 3.28
62 63 2.679716 CCTCTTTGGGGAGCCCTG 59.320 66.667 5.38 0.00 45.70 4.45
63 64 2.044551 CTCTTTGGGGAGCCCTGC 60.045 66.667 5.38 0.00 45.70 4.85
64 65 3.651980 CTCTTTGGGGAGCCCTGCC 62.652 68.421 5.38 0.00 45.70 4.85
72 73 2.366972 GAGCCCTGCCCCTCCTTA 60.367 66.667 0.00 0.00 0.00 2.69
73 74 1.772156 GAGCCCTGCCCCTCCTTAT 60.772 63.158 0.00 0.00 0.00 1.73
74 75 0.473886 GAGCCCTGCCCCTCCTTATA 60.474 60.000 0.00 0.00 0.00 0.98
75 76 0.197145 AGCCCTGCCCCTCCTTATAT 59.803 55.000 0.00 0.00 0.00 0.86
76 77 1.441150 AGCCCTGCCCCTCCTTATATA 59.559 52.381 0.00 0.00 0.00 0.86
77 78 2.047865 AGCCCTGCCCCTCCTTATATAT 59.952 50.000 0.00 0.00 0.00 0.86
78 79 2.173569 GCCCTGCCCCTCCTTATATATG 59.826 54.545 0.00 0.00 0.00 1.78
79 80 3.464828 CCCTGCCCCTCCTTATATATGT 58.535 50.000 0.00 0.00 0.00 2.29
80 81 3.852578 CCCTGCCCCTCCTTATATATGTT 59.147 47.826 0.00 0.00 0.00 2.71
81 82 4.324563 CCCTGCCCCTCCTTATATATGTTG 60.325 50.000 0.00 0.00 0.00 3.33
82 83 4.536090 CCTGCCCCTCCTTATATATGTTGA 59.464 45.833 0.00 0.00 0.00 3.18
83 84 5.014123 CCTGCCCCTCCTTATATATGTTGAA 59.986 44.000 0.00 0.00 0.00 2.69
84 85 6.126863 TGCCCCTCCTTATATATGTTGAAG 57.873 41.667 0.00 0.00 0.00 3.02
85 86 5.014123 TGCCCCTCCTTATATATGTTGAAGG 59.986 44.000 5.85 5.85 39.94 3.46
86 87 5.573707 GCCCCTCCTTATATATGTTGAAGGG 60.574 48.000 10.73 11.41 39.20 3.95
87 88 5.044846 CCCCTCCTTATATATGTTGAAGGGG 60.045 48.000 18.89 18.89 44.27 4.79
88 89 5.501156 CCTCCTTATATATGTTGAAGGGGC 58.499 45.833 10.73 0.00 38.10 5.80
89 90 5.160607 TCCTTATATATGTTGAAGGGGCG 57.839 43.478 10.73 0.00 39.20 6.13
90 91 4.019681 TCCTTATATATGTTGAAGGGGCGG 60.020 45.833 10.73 0.00 39.20 6.13
91 92 2.879103 ATATATGTTGAAGGGGCGGG 57.121 50.000 0.00 0.00 0.00 6.13
92 93 1.513858 TATATGTTGAAGGGGCGGGT 58.486 50.000 0.00 0.00 0.00 5.28
93 94 0.629058 ATATGTTGAAGGGGCGGGTT 59.371 50.000 0.00 0.00 0.00 4.11
94 95 1.287217 TATGTTGAAGGGGCGGGTTA 58.713 50.000 0.00 0.00 0.00 2.85
95 96 0.323087 ATGTTGAAGGGGCGGGTTAC 60.323 55.000 0.00 0.00 0.00 2.50
96 97 1.073548 GTTGAAGGGGCGGGTTACA 59.926 57.895 0.00 0.00 0.00 2.41
97 98 0.323087 GTTGAAGGGGCGGGTTACAT 60.323 55.000 0.00 0.00 0.00 2.29
98 99 0.322997 TTGAAGGGGCGGGTTACATG 60.323 55.000 0.00 0.00 0.00 3.21
99 100 1.301954 GAAGGGGCGGGTTACATGT 59.698 57.895 2.69 2.69 0.00 3.21
100 101 1.001393 AAGGGGCGGGTTACATGTG 60.001 57.895 9.11 0.00 0.00 3.21
101 102 2.439519 GGGGCGGGTTACATGTGG 60.440 66.667 9.11 0.00 0.00 4.17
102 103 2.672295 GGGCGGGTTACATGTGGA 59.328 61.111 9.11 0.00 0.00 4.02
103 104 1.451387 GGGCGGGTTACATGTGGAG 60.451 63.158 9.11 0.00 0.00 3.86
104 105 1.298667 GGCGGGTTACATGTGGAGT 59.701 57.895 9.11 0.00 0.00 3.85
105 106 0.743345 GGCGGGTTACATGTGGAGTC 60.743 60.000 9.11 0.00 0.00 3.36
106 107 0.743345 GCGGGTTACATGTGGAGTCC 60.743 60.000 9.11 0.73 0.00 3.85
107 108 0.902531 CGGGTTACATGTGGAGTCCT 59.097 55.000 9.11 0.00 0.00 3.85
108 109 2.104967 CGGGTTACATGTGGAGTCCTA 58.895 52.381 9.11 0.00 0.00 2.94
109 110 2.698797 CGGGTTACATGTGGAGTCCTAT 59.301 50.000 9.11 2.10 0.00 2.57
110 111 3.134081 CGGGTTACATGTGGAGTCCTATT 59.866 47.826 9.11 0.00 0.00 1.73
111 112 4.342951 CGGGTTACATGTGGAGTCCTATTA 59.657 45.833 9.11 0.00 0.00 0.98
112 113 5.509163 CGGGTTACATGTGGAGTCCTATTAG 60.509 48.000 9.11 0.00 0.00 1.73
113 114 5.221661 GGGTTACATGTGGAGTCCTATTAGG 60.222 48.000 9.11 3.07 36.46 2.69
114 115 5.601313 GGTTACATGTGGAGTCCTATTAGGA 59.399 44.000 9.11 8.42 43.43 2.94
130 131 8.834733 TCCTATTAGGATTAGGACTAGTCTACC 58.165 40.741 21.88 16.30 40.06 3.18
131 132 8.838741 CCTATTAGGATTAGGACTAGTCTACCT 58.161 40.741 21.88 21.10 37.67 3.08
134 135 6.851965 AGGATTAGGACTAGTCTACCTTCT 57.148 41.667 21.88 11.79 35.52 2.85
135 136 7.951157 AGGATTAGGACTAGTCTACCTTCTA 57.049 40.000 21.88 10.84 35.52 2.10
136 137 8.347557 AGGATTAGGACTAGTCTACCTTCTAA 57.652 38.462 21.88 17.91 35.52 2.10
137 138 8.962205 AGGATTAGGACTAGTCTACCTTCTAAT 58.038 37.037 21.88 21.09 35.52 1.73
143 144 9.187996 AGGACTAGTCTACCTTCTAATACAAAC 57.812 37.037 21.88 0.00 0.00 2.93
144 145 8.412456 GGACTAGTCTACCTTCTAATACAAACC 58.588 40.741 21.88 0.00 0.00 3.27
145 146 7.994194 ACTAGTCTACCTTCTAATACAAACCG 58.006 38.462 0.00 0.00 0.00 4.44
146 147 6.218108 AGTCTACCTTCTAATACAAACCGG 57.782 41.667 0.00 0.00 0.00 5.28
147 148 5.954150 AGTCTACCTTCTAATACAAACCGGA 59.046 40.000 9.46 0.00 0.00 5.14
148 149 6.610425 AGTCTACCTTCTAATACAAACCGGAT 59.390 38.462 9.46 0.00 0.00 4.18
149 150 7.781693 AGTCTACCTTCTAATACAAACCGGATA 59.218 37.037 9.46 0.00 0.00 2.59
150 151 7.864882 GTCTACCTTCTAATACAAACCGGATAC 59.135 40.741 9.46 0.00 0.00 2.24
151 152 6.549433 ACCTTCTAATACAAACCGGATACA 57.451 37.500 9.46 0.00 0.00 2.29
152 153 6.949715 ACCTTCTAATACAAACCGGATACAA 58.050 36.000 9.46 0.00 0.00 2.41
153 154 7.046033 ACCTTCTAATACAAACCGGATACAAG 58.954 38.462 9.46 0.00 0.00 3.16
154 155 7.046033 CCTTCTAATACAAACCGGATACAAGT 58.954 38.462 9.46 0.00 0.00 3.16
155 156 7.224167 CCTTCTAATACAAACCGGATACAAGTC 59.776 40.741 9.46 0.00 0.00 3.01
156 157 6.576185 TCTAATACAAACCGGATACAAGTCC 58.424 40.000 9.46 0.00 34.82 3.85
166 167 3.790091 GGATACAAGTCCGGGTCTTAAC 58.210 50.000 0.00 0.00 0.00 2.01
167 168 3.431346 GGATACAAGTCCGGGTCTTAACC 60.431 52.174 0.00 4.74 45.65 2.85
180 181 5.503634 GGTCTTAACCCCTTGTAAGGTAA 57.496 43.478 9.65 1.96 44.98 2.85
181 182 5.879763 GGTCTTAACCCCTTGTAAGGTAAA 58.120 41.667 9.65 0.00 44.98 2.01
182 183 6.487828 GGTCTTAACCCCTTGTAAGGTAAAT 58.512 40.000 9.65 0.00 44.98 1.40
183 184 7.632861 GGTCTTAACCCCTTGTAAGGTAAATA 58.367 38.462 9.65 0.00 44.98 1.40
184 185 8.277197 GGTCTTAACCCCTTGTAAGGTAAATAT 58.723 37.037 9.65 0.00 44.98 1.28
185 186 9.690913 GTCTTAACCCCTTGTAAGGTAAATATT 57.309 33.333 9.65 0.00 44.98 1.28
186 187 9.910267 TCTTAACCCCTTGTAAGGTAAATATTC 57.090 33.333 9.65 0.00 44.98 1.75
187 188 9.128404 CTTAACCCCTTGTAAGGTAAATATTCC 57.872 37.037 9.65 0.00 44.98 3.01
188 189 6.920695 ACCCCTTGTAAGGTAAATATTCCT 57.079 37.500 9.65 0.00 44.98 3.36
189 190 7.293326 ACCCCTTGTAAGGTAAATATTCCTT 57.707 36.000 11.91 11.91 44.98 3.36
190 191 8.410000 ACCCCTTGTAAGGTAAATATTCCTTA 57.590 34.615 10.28 10.28 44.98 2.69
191 192 9.021747 ACCCCTTGTAAGGTAAATATTCCTTAT 57.978 33.333 15.24 0.41 44.61 1.73
192 193 9.297037 CCCCTTGTAAGGTAAATATTCCTTATG 57.703 37.037 15.24 10.36 44.61 1.90
193 194 8.793592 CCCTTGTAAGGTAAATATTCCTTATGC 58.206 37.037 15.24 7.39 44.61 3.14
194 195 8.793592 CCTTGTAAGGTAAATATTCCTTATGCC 58.206 37.037 15.24 6.88 44.61 4.40
195 196 9.574516 CTTGTAAGGTAAATATTCCTTATGCCT 57.425 33.333 15.24 4.03 44.61 4.75
196 197 9.930158 TTGTAAGGTAAATATTCCTTATGCCTT 57.070 29.630 15.24 12.75 44.61 4.35
197 198 9.930158 TGTAAGGTAAATATTCCTTATGCCTTT 57.070 29.630 15.24 2.15 44.61 3.11
199 200 8.478775 AAGGTAAATATTCCTTATGCCTTTCC 57.521 34.615 6.65 0.00 41.55 3.13
200 201 7.826747 AGGTAAATATTCCTTATGCCTTTCCT 58.173 34.615 0.00 0.00 0.00 3.36
201 202 8.289544 AGGTAAATATTCCTTATGCCTTTCCTT 58.710 33.333 0.00 0.00 0.00 3.36
202 203 8.360390 GGTAAATATTCCTTATGCCTTTCCTTG 58.640 37.037 0.00 0.00 0.00 3.61
203 204 7.978099 AAATATTCCTTATGCCTTTCCTTGT 57.022 32.000 0.00 0.00 0.00 3.16
205 206 9.487442 AAATATTCCTTATGCCTTTCCTTGTAA 57.513 29.630 0.00 0.00 0.00 2.41
206 207 9.487442 AATATTCCTTATGCCTTTCCTTGTAAA 57.513 29.630 0.00 0.00 0.00 2.01
207 208 6.584185 TTCCTTATGCCTTTCCTTGTAAAC 57.416 37.500 0.00 0.00 0.00 2.01
208 209 5.014202 TCCTTATGCCTTTCCTTGTAAACC 58.986 41.667 0.00 0.00 0.00 3.27
209 210 4.142469 CCTTATGCCTTTCCTTGTAAACCG 60.142 45.833 0.00 0.00 0.00 4.44
210 211 1.611519 TGCCTTTCCTTGTAAACCGG 58.388 50.000 0.00 0.00 0.00 5.28
211 212 0.242825 GCCTTTCCTTGTAAACCGGC 59.757 55.000 0.00 0.00 0.00 6.13
212 213 0.885879 CCTTTCCTTGTAAACCGGCC 59.114 55.000 0.00 0.00 0.00 6.13
213 214 0.885879 CTTTCCTTGTAAACCGGCCC 59.114 55.000 0.00 0.00 0.00 5.80
214 215 0.185416 TTTCCTTGTAAACCGGCCCA 59.815 50.000 0.00 0.00 0.00 5.36
215 216 0.537828 TTCCTTGTAAACCGGCCCAC 60.538 55.000 0.00 0.00 0.00 4.61
216 217 1.974875 CCTTGTAAACCGGCCCACC 60.975 63.158 0.00 0.00 0.00 4.61
217 218 1.228306 CTTGTAAACCGGCCCACCA 60.228 57.895 0.00 0.00 34.57 4.17
218 219 0.610785 CTTGTAAACCGGCCCACCAT 60.611 55.000 0.00 0.00 34.57 3.55
219 220 0.697079 TTGTAAACCGGCCCACCATA 59.303 50.000 0.00 0.00 34.57 2.74
220 221 0.253610 TGTAAACCGGCCCACCATAG 59.746 55.000 0.00 0.00 34.57 2.23
221 222 0.253894 GTAAACCGGCCCACCATAGT 59.746 55.000 0.00 0.00 34.57 2.12
222 223 1.485895 GTAAACCGGCCCACCATAGTA 59.514 52.381 0.00 0.00 34.57 1.82
223 224 1.218844 AAACCGGCCCACCATAGTAT 58.781 50.000 0.00 0.00 34.57 2.12
224 225 0.472471 AACCGGCCCACCATAGTATG 59.528 55.000 0.00 2.90 34.57 2.39
225 226 0.399376 ACCGGCCCACCATAGTATGA 60.399 55.000 11.91 0.00 34.57 2.15
226 227 0.321671 CCGGCCCACCATAGTATGAG 59.678 60.000 11.91 4.61 34.57 2.90
227 228 0.320771 CGGCCCACCATAGTATGAGC 60.321 60.000 11.91 8.43 34.57 4.26
228 229 0.036875 GGCCCACCATAGTATGAGCC 59.963 60.000 11.91 13.14 35.26 4.70
229 230 0.320771 GCCCACCATAGTATGAGCCG 60.321 60.000 11.91 0.00 0.00 5.52
230 231 0.321671 CCCACCATAGTATGAGCCGG 59.678 60.000 11.91 0.00 0.00 6.13
231 232 0.320771 CCACCATAGTATGAGCCGGC 60.321 60.000 21.89 21.89 0.00 6.13
232 233 0.320771 CACCATAGTATGAGCCGGCC 60.321 60.000 26.15 15.80 0.00 6.13
233 234 0.471971 ACCATAGTATGAGCCGGCCT 60.472 55.000 26.15 15.54 0.00 5.19
234 235 0.687354 CCATAGTATGAGCCGGCCTT 59.313 55.000 26.15 15.10 0.00 4.35
235 236 1.072331 CCATAGTATGAGCCGGCCTTT 59.928 52.381 26.15 10.62 0.00 3.11
236 237 2.417719 CATAGTATGAGCCGGCCTTTC 58.582 52.381 26.15 15.68 0.00 2.62
237 238 1.491668 TAGTATGAGCCGGCCTTTCA 58.508 50.000 26.15 21.51 0.00 2.69
238 239 0.839946 AGTATGAGCCGGCCTTTCAT 59.160 50.000 26.88 26.88 35.79 2.57
239 240 0.947244 GTATGAGCCGGCCTTTCATG 59.053 55.000 29.97 0.00 33.81 3.07
240 241 0.836606 TATGAGCCGGCCTTTCATGA 59.163 50.000 29.97 16.42 33.81 3.07
241 242 0.034186 ATGAGCCGGCCTTTCATGAA 60.034 50.000 24.32 3.38 30.76 2.57
242 243 0.960364 TGAGCCGGCCTTTCATGAAC 60.960 55.000 26.15 0.00 0.00 3.18
243 244 1.657751 GAGCCGGCCTTTCATGAACC 61.658 60.000 26.15 5.56 0.00 3.62
244 245 3.051392 GCCGGCCTTTCATGAACCG 62.051 63.158 22.59 22.59 43.44 4.44
245 246 2.485122 CGGCCTTTCATGAACCGC 59.515 61.111 19.30 17.02 37.05 5.68
246 247 2.040544 CGGCCTTTCATGAACCGCT 61.041 57.895 19.30 0.00 37.05 5.52
247 248 1.803289 GGCCTTTCATGAACCGCTC 59.197 57.895 19.95 10.44 0.00 5.03
248 249 1.425428 GCCTTTCATGAACCGCTCG 59.575 57.895 7.89 0.00 0.00 5.03
249 250 1.298859 GCCTTTCATGAACCGCTCGT 61.299 55.000 7.89 0.00 0.00 4.18
250 251 1.156736 CCTTTCATGAACCGCTCGTT 58.843 50.000 7.89 0.00 37.41 3.85
251 252 1.135972 CCTTTCATGAACCGCTCGTTG 60.136 52.381 7.89 0.00 33.74 4.10
252 253 0.871722 TTTCATGAACCGCTCGTTGG 59.128 50.000 7.89 0.00 33.74 3.77
253 254 0.953471 TTCATGAACCGCTCGTTGGG 60.953 55.000 3.38 0.00 33.74 4.12
254 255 2.746277 ATGAACCGCTCGTTGGGC 60.746 61.111 0.00 0.00 33.74 5.36
265 266 4.280019 GTTGGGCCACCGGGTCTT 62.280 66.667 5.23 0.00 39.39 3.01
266 267 4.278513 TTGGGCCACCGGGTCTTG 62.279 66.667 5.23 0.00 39.39 3.02
268 269 4.717313 GGGCCACCGGGTCTTGTC 62.717 72.222 6.32 0.00 39.39 3.18
271 272 4.003788 CCACCGGGTCTTGTCGCT 62.004 66.667 6.32 0.00 0.00 4.93
272 273 2.432628 CACCGGGTCTTGTCGCTC 60.433 66.667 6.32 0.00 0.00 5.03
273 274 3.692406 ACCGGGTCTTGTCGCTCC 61.692 66.667 6.32 0.00 0.00 4.70
274 275 3.382832 CCGGGTCTTGTCGCTCCT 61.383 66.667 0.00 0.00 0.00 3.69
275 276 2.182030 CGGGTCTTGTCGCTCCTC 59.818 66.667 0.00 0.00 0.00 3.71
276 277 2.344203 CGGGTCTTGTCGCTCCTCT 61.344 63.158 0.00 0.00 0.00 3.69
277 278 1.216710 GGGTCTTGTCGCTCCTCTG 59.783 63.158 0.00 0.00 0.00 3.35
278 279 1.251527 GGGTCTTGTCGCTCCTCTGA 61.252 60.000 0.00 0.00 0.00 3.27
279 280 0.109039 GGTCTTGTCGCTCCTCTGAC 60.109 60.000 0.00 0.00 35.67 3.51
280 281 0.109039 GTCTTGTCGCTCCTCTGACC 60.109 60.000 0.00 0.00 34.18 4.02
281 282 1.216710 CTTGTCGCTCCTCTGACCC 59.783 63.158 0.00 0.00 34.18 4.46
282 283 2.549611 CTTGTCGCTCCTCTGACCCG 62.550 65.000 0.00 0.00 34.18 5.28
283 284 4.500116 GTCGCTCCTCTGACCCGC 62.500 72.222 0.00 0.00 0.00 6.13
286 287 4.154347 GCTCCTCTGACCCGCCTG 62.154 72.222 0.00 0.00 0.00 4.85
287 288 4.154347 CTCCTCTGACCCGCCTGC 62.154 72.222 0.00 0.00 0.00 4.85
298 299 2.124901 CGCCTGCCGGATTACCAA 60.125 61.111 5.05 0.00 35.59 3.67
299 300 1.525995 CGCCTGCCGGATTACCAAT 60.526 57.895 5.05 0.00 35.59 3.16
300 301 1.785041 CGCCTGCCGGATTACCAATG 61.785 60.000 5.05 0.00 35.59 2.82
301 302 0.465460 GCCTGCCGGATTACCAATGA 60.465 55.000 5.05 0.00 35.59 2.57
302 303 2.021723 GCCTGCCGGATTACCAATGAA 61.022 52.381 5.05 0.00 35.59 2.57
303 304 2.586425 CCTGCCGGATTACCAATGAAT 58.414 47.619 5.05 0.00 35.59 2.57
304 305 2.554032 CCTGCCGGATTACCAATGAATC 59.446 50.000 5.05 0.00 35.59 2.52
305 306 2.217750 TGCCGGATTACCAATGAATCG 58.782 47.619 5.05 0.00 34.67 3.34
306 307 2.218603 GCCGGATTACCAATGAATCGT 58.781 47.619 5.05 0.00 34.67 3.73
307 308 3.181464 TGCCGGATTACCAATGAATCGTA 60.181 43.478 5.05 0.00 34.67 3.43
308 309 3.810941 GCCGGATTACCAATGAATCGTAA 59.189 43.478 5.05 0.00 34.67 3.18
309 310 4.273969 GCCGGATTACCAATGAATCGTAAA 59.726 41.667 5.05 0.00 34.67 2.01
310 311 5.744490 CCGGATTACCAATGAATCGTAAAC 58.256 41.667 0.00 0.00 34.67 2.01
311 312 5.277634 CCGGATTACCAATGAATCGTAAACC 60.278 44.000 0.00 0.00 34.67 3.27
312 313 5.557514 CGGATTACCAATGAATCGTAAACCG 60.558 44.000 11.66 11.66 45.54 4.44
313 314 4.603231 TTACCAATGAATCGTAAACCGC 57.397 40.909 0.00 0.00 36.19 5.68
314 315 1.741145 ACCAATGAATCGTAAACCGCC 59.259 47.619 0.00 0.00 36.19 6.13
315 316 1.740585 CCAATGAATCGTAAACCGCCA 59.259 47.619 0.00 0.00 36.19 5.69
316 317 2.223249 CCAATGAATCGTAAACCGCCAG 60.223 50.000 0.00 0.00 36.19 4.85
317 318 1.663695 ATGAATCGTAAACCGCCAGG 58.336 50.000 0.00 0.00 45.13 4.45
330 331 4.760047 CCAGGTCCAAGCGGGTCG 62.760 72.222 0.00 0.00 38.11 4.79
341 342 2.885644 CGGGTCGCCAGTGAATCG 60.886 66.667 0.00 0.00 0.00 3.34
342 343 3.195698 GGGTCGCCAGTGAATCGC 61.196 66.667 0.00 0.00 0.00 4.58
343 344 3.195698 GGTCGCCAGTGAATCGCC 61.196 66.667 0.00 0.00 0.00 5.54
344 345 2.434185 GTCGCCAGTGAATCGCCA 60.434 61.111 0.00 0.00 0.00 5.69
345 346 2.032634 GTCGCCAGTGAATCGCCAA 61.033 57.895 0.00 0.00 0.00 4.52
346 347 1.302112 TCGCCAGTGAATCGCCAAA 60.302 52.632 0.00 0.00 0.00 3.28
347 348 1.154225 CGCCAGTGAATCGCCAAAC 60.154 57.895 0.00 0.00 0.00 2.93
348 349 1.577328 CGCCAGTGAATCGCCAAACT 61.577 55.000 0.00 0.00 0.00 2.66
349 350 0.169009 GCCAGTGAATCGCCAAACTC 59.831 55.000 0.00 0.00 0.00 3.01
350 351 0.804989 CCAGTGAATCGCCAAACTCC 59.195 55.000 0.00 0.00 0.00 3.85
351 352 1.522668 CAGTGAATCGCCAAACTCCA 58.477 50.000 0.00 0.00 0.00 3.86
352 353 1.466167 CAGTGAATCGCCAAACTCCAG 59.534 52.381 0.00 0.00 0.00 3.86
353 354 0.169009 GTGAATCGCCAAACTCCAGC 59.831 55.000 0.00 0.00 0.00 4.85
354 355 0.960364 TGAATCGCCAAACTCCAGCC 60.960 55.000 0.00 0.00 0.00 4.85
355 356 0.678048 GAATCGCCAAACTCCAGCCT 60.678 55.000 0.00 0.00 0.00 4.58
356 357 0.251341 AATCGCCAAACTCCAGCCTT 60.251 50.000 0.00 0.00 0.00 4.35
357 358 0.962356 ATCGCCAAACTCCAGCCTTG 60.962 55.000 0.00 0.00 0.00 3.61
358 359 1.898574 CGCCAAACTCCAGCCTTGT 60.899 57.895 0.00 0.00 0.00 3.16
359 360 1.856265 CGCCAAACTCCAGCCTTGTC 61.856 60.000 0.00 0.00 0.00 3.18
360 361 0.823356 GCCAAACTCCAGCCTTGTCA 60.823 55.000 0.00 0.00 0.00 3.58
361 362 1.915141 CCAAACTCCAGCCTTGTCAT 58.085 50.000 0.00 0.00 0.00 3.06
362 363 2.879756 GCCAAACTCCAGCCTTGTCATA 60.880 50.000 0.00 0.00 0.00 2.15
363 364 2.749621 CCAAACTCCAGCCTTGTCATAC 59.250 50.000 0.00 0.00 0.00 2.39
364 365 3.411446 CAAACTCCAGCCTTGTCATACA 58.589 45.455 0.00 0.00 0.00 2.29
365 366 4.012374 CAAACTCCAGCCTTGTCATACAT 58.988 43.478 0.00 0.00 0.00 2.29
366 367 3.550437 ACTCCAGCCTTGTCATACATC 57.450 47.619 0.00 0.00 0.00 3.06
367 368 2.171448 ACTCCAGCCTTGTCATACATCC 59.829 50.000 0.00 0.00 0.00 3.51
368 369 1.138859 TCCAGCCTTGTCATACATCCG 59.861 52.381 0.00 0.00 0.00 4.18
369 370 1.586422 CAGCCTTGTCATACATCCGG 58.414 55.000 0.00 0.00 0.00 5.14
370 371 0.179045 AGCCTTGTCATACATCCGGC 60.179 55.000 0.00 0.00 36.89 6.13
371 372 0.179045 GCCTTGTCATACATCCGGCT 60.179 55.000 0.00 0.00 35.10 5.52
372 373 1.586422 CCTTGTCATACATCCGGCTG 58.414 55.000 3.14 3.14 0.00 4.85
373 374 1.134401 CCTTGTCATACATCCGGCTGT 60.134 52.381 16.30 16.30 0.00 4.40
374 375 2.632377 CTTGTCATACATCCGGCTGTT 58.368 47.619 17.34 1.82 0.00 3.16
375 376 2.779755 TGTCATACATCCGGCTGTTT 57.220 45.000 17.34 5.84 0.00 2.83
376 377 3.897141 TGTCATACATCCGGCTGTTTA 57.103 42.857 17.34 0.00 0.00 2.01
377 378 4.415881 TGTCATACATCCGGCTGTTTAT 57.584 40.909 17.34 1.73 0.00 1.40
378 379 5.538849 TGTCATACATCCGGCTGTTTATA 57.461 39.130 17.34 0.00 0.00 0.98
379 380 5.294356 TGTCATACATCCGGCTGTTTATAC 58.706 41.667 17.34 10.62 0.00 1.47
380 381 4.689345 GTCATACATCCGGCTGTTTATACC 59.311 45.833 17.34 0.00 0.00 2.73
381 382 2.234300 ACATCCGGCTGTTTATACCG 57.766 50.000 4.78 0.00 46.50 4.02
382 383 0.865769 CATCCGGCTGTTTATACCGC 59.134 55.000 0.00 0.00 45.58 5.68
383 384 0.599204 ATCCGGCTGTTTATACCGCG 60.599 55.000 0.00 0.00 45.58 6.46
384 385 2.241880 CCGGCTGTTTATACCGCGG 61.242 63.158 26.86 26.86 45.58 6.46
385 386 2.241880 CGGCTGTTTATACCGCGGG 61.242 63.158 31.76 11.88 40.55 6.13
386 387 1.890510 GGCTGTTTATACCGCGGGG 60.891 63.158 31.76 18.33 35.57 5.73
409 410 1.432023 ATCCCCGACACCCTGGTTTT 61.432 55.000 0.00 0.00 0.00 2.43
410 411 1.901464 CCCCGACACCCTGGTTTTG 60.901 63.158 0.00 0.00 0.00 2.44
443 444 1.248486 GCAGAAAGTCCCCAAACTCC 58.752 55.000 0.00 0.00 0.00 3.85
555 559 9.645128 AACATGATCCATATTTGGTTAATCTCA 57.355 29.630 0.00 0.00 44.06 3.27
595 599 8.560355 TTGTTGTACTAGACATATTTGCATGT 57.440 30.769 0.00 0.00 41.83 3.21
615 619 8.819015 TGCATGTTATTTATGAATGATTTGTGC 58.181 29.630 0.00 0.00 0.00 4.57
630 637 9.558396 AATGATTTGTGCTTTTTCTATCCAAAA 57.442 25.926 0.00 0.00 0.00 2.44
680 687 7.953752 TGAAATTTACCCGGTTAGTTGAAATT 58.046 30.769 0.00 0.00 0.00 1.82
686 693 4.038282 ACCCGGTTAGTTGAAATTTGGTTC 59.962 41.667 0.00 0.00 0.00 3.62
687 694 4.038162 CCCGGTTAGTTGAAATTTGGTTCA 59.962 41.667 0.00 0.00 35.72 3.18
697 866 8.558700 AGTTGAAATTTGGTTCAAAATGTATGC 58.441 29.630 0.00 0.00 46.28 3.14
699 868 6.925718 TGAAATTTGGTTCAAAATGTATGCGA 59.074 30.769 0.00 0.00 36.90 5.10
701 870 6.949578 ATTTGGTTCAAAATGTATGCGAAG 57.050 33.333 0.00 0.00 36.90 3.79
705 874 9.546203 TTTGGTTCAAAATGTATGCGAAGAGCA 62.546 37.037 0.00 0.00 44.50 4.26
720 889 0.822164 GAGCATTGAATGGCTGGCTT 59.178 50.000 7.35 0.00 41.22 4.35
722 891 1.626825 AGCATTGAATGGCTGGCTTTT 59.373 42.857 7.35 0.00 39.30 2.27
724 893 2.931969 GCATTGAATGGCTGGCTTTTAC 59.068 45.455 7.35 0.00 0.00 2.01
728 897 4.191033 TGAATGGCTGGCTTTTACATTG 57.809 40.909 2.00 0.00 32.42 2.82
729 898 3.831333 TGAATGGCTGGCTTTTACATTGA 59.169 39.130 2.00 0.00 32.42 2.57
733 902 3.193267 TGGCTGGCTTTTACATTGATGTC 59.807 43.478 2.00 0.00 41.97 3.06
736 905 2.752354 TGGCTTTTACATTGATGTCCGG 59.248 45.455 0.00 0.00 41.97 5.14
743 912 0.541392 CATTGATGTCCGGGGACTGA 59.459 55.000 18.07 0.00 44.80 3.41
756 925 2.284625 ACTGATCCCCTGTCCGCA 60.285 61.111 0.00 0.00 0.00 5.69
757 926 1.690219 GACTGATCCCCTGTCCGCAT 61.690 60.000 0.00 0.00 37.65 4.73
758 927 0.398522 ACTGATCCCCTGTCCGCATA 60.399 55.000 0.00 0.00 0.00 3.14
759 928 0.034059 CTGATCCCCTGTCCGCATAC 59.966 60.000 0.00 0.00 0.00 2.39
760 929 0.398522 TGATCCCCTGTCCGCATACT 60.399 55.000 0.00 0.00 0.00 2.12
761 930 0.034059 GATCCCCTGTCCGCATACTG 59.966 60.000 0.00 0.00 0.00 2.74
762 931 0.398522 ATCCCCTGTCCGCATACTGA 60.399 55.000 0.00 0.00 0.00 3.41
763 932 1.144057 CCCCTGTCCGCATACTGAC 59.856 63.158 0.00 0.00 0.00 3.51
806 975 4.871822 AGATGCCCTTACCTAGCATTTTT 58.128 39.130 0.00 0.00 46.81 1.94
876 2057 2.624636 GGCAATCAAAATGAAGCTGGG 58.375 47.619 0.00 0.00 33.69 4.45
1095 2291 2.693762 CGCTGGTCGACGGAAGGTA 61.694 63.158 9.92 0.00 41.67 3.08
1236 2432 3.537874 GCCCCGCCAGTATCGAGT 61.538 66.667 0.00 0.00 0.00 4.18
1323 2519 4.577283 ACTCTGTTTCGATCTACTCTAGCC 59.423 45.833 0.00 0.00 0.00 3.93
1362 2558 1.512926 CTCTTGTGGTTCCCAACTCG 58.487 55.000 0.00 0.00 34.18 4.18
1428 2624 6.696148 AGTCGGCTTTCGTAGTAATTTGATAG 59.304 38.462 0.00 0.00 40.32 2.08
1431 2627 6.255020 CGGCTTTCGTAGTAATTTGATAGTGT 59.745 38.462 0.00 0.00 0.00 3.55
1530 2731 0.804989 GGCAACTGGAGATTTGGACG 59.195 55.000 0.00 0.00 0.00 4.79
1703 2904 5.062058 CGTATCATGTCAAATTTGTTTGGCC 59.938 40.000 17.47 0.00 35.79 5.36
1716 2917 3.592059 TGTTTGGCCGAGTGACTATTAC 58.408 45.455 0.00 0.00 0.00 1.89
1840 3041 1.280133 TGAAGGCTCAGGACTTGATGG 59.720 52.381 0.00 0.00 41.58 3.51
2029 3230 5.943416 TGCTGGCTAACATGTACTATTTTGT 59.057 36.000 0.00 0.00 0.00 2.83
2388 3598 0.333993 ATGTGGCTTTCTGGGATGCT 59.666 50.000 0.00 0.00 0.00 3.79
2573 3783 7.646314 CCAGCTTCCATATTCTCAAAATACTG 58.354 38.462 0.00 0.00 0.00 2.74
2614 3824 6.426587 ACCTAATAAAGTACTACCTCCGTCA 58.573 40.000 0.00 0.00 0.00 4.35
2626 3836 3.606687 ACCTCCGTCATGGTTTATTGAC 58.393 45.455 0.00 0.00 39.52 3.18
2743 3953 8.420374 TCGAACATAGTTTTCAATGATACTCC 57.580 34.615 2.44 0.00 0.00 3.85
2744 3954 7.494625 TCGAACATAGTTTTCAATGATACTCCC 59.505 37.037 2.44 0.00 0.00 4.30
2745 3955 7.495934 CGAACATAGTTTTCAATGATACTCCCT 59.504 37.037 2.44 0.00 0.00 4.20
2746 3956 8.738645 AACATAGTTTTCAATGATACTCCCTC 57.261 34.615 2.44 0.00 0.00 4.30
2747 3957 7.283329 ACATAGTTTTCAATGATACTCCCTCC 58.717 38.462 2.44 0.00 0.00 4.30
2748 3958 4.770795 AGTTTTCAATGATACTCCCTCCG 58.229 43.478 0.00 0.00 0.00 4.63
2749 3959 4.225267 AGTTTTCAATGATACTCCCTCCGT 59.775 41.667 0.00 0.00 0.00 4.69
2750 3960 4.837093 TTTCAATGATACTCCCTCCGTT 57.163 40.909 0.00 0.00 0.00 4.44
2751 3961 4.402056 TTCAATGATACTCCCTCCGTTC 57.598 45.455 0.00 0.00 0.00 3.95
2752 3962 2.698797 TCAATGATACTCCCTCCGTTCC 59.301 50.000 0.00 0.00 0.00 3.62
2753 3963 1.718280 ATGATACTCCCTCCGTTCCC 58.282 55.000 0.00 0.00 0.00 3.97
2754 3964 0.337082 TGATACTCCCTCCGTTCCCA 59.663 55.000 0.00 0.00 0.00 4.37
2755 3965 1.273381 TGATACTCCCTCCGTTCCCAA 60.273 52.381 0.00 0.00 0.00 4.12
2756 3966 1.835531 GATACTCCCTCCGTTCCCAAA 59.164 52.381 0.00 0.00 0.00 3.28
2757 3967 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
2758 3968 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2759 3969 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
2760 3970 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
2761 3971 3.118000 ACTCCCTCCGTTCCCAAATATTC 60.118 47.826 0.00 0.00 0.00 1.75
2762 3972 2.158871 TCCCTCCGTTCCCAAATATTCG 60.159 50.000 0.00 0.00 0.00 3.34
2763 3973 2.420967 CCCTCCGTTCCCAAATATTCGT 60.421 50.000 0.00 0.00 0.00 3.85
2764 3974 2.870411 CCTCCGTTCCCAAATATTCGTC 59.130 50.000 0.00 0.00 0.00 4.20
2765 3975 3.431766 CCTCCGTTCCCAAATATTCGTCT 60.432 47.826 0.00 0.00 0.00 4.18
2766 3976 4.189231 CTCCGTTCCCAAATATTCGTCTT 58.811 43.478 0.00 0.00 0.00 3.01
2767 3977 4.581868 TCCGTTCCCAAATATTCGTCTTT 58.418 39.130 0.00 0.00 0.00 2.52
2768 3978 4.632688 TCCGTTCCCAAATATTCGTCTTTC 59.367 41.667 0.00 0.00 0.00 2.62
2769 3979 4.634443 CCGTTCCCAAATATTCGTCTTTCT 59.366 41.667 0.00 0.00 0.00 2.52
2770 3980 5.447279 CCGTTCCCAAATATTCGTCTTTCTG 60.447 44.000 0.00 0.00 0.00 3.02
2771 3981 5.447279 CGTTCCCAAATATTCGTCTTTCTGG 60.447 44.000 0.00 0.00 0.00 3.86
2772 3982 5.429681 TCCCAAATATTCGTCTTTCTGGA 57.570 39.130 0.96 0.00 0.00 3.86
2773 3983 5.183228 TCCCAAATATTCGTCTTTCTGGAC 58.817 41.667 0.96 0.00 0.00 4.02
2774 3984 4.941263 CCCAAATATTCGTCTTTCTGGACA 59.059 41.667 0.96 0.00 36.12 4.02
2775 3985 5.590259 CCCAAATATTCGTCTTTCTGGACAT 59.410 40.000 0.96 0.00 36.12 3.06
2776 3986 6.095440 CCCAAATATTCGTCTTTCTGGACATT 59.905 38.462 0.96 0.00 36.12 2.71
2777 3987 7.362920 CCCAAATATTCGTCTTTCTGGACATTT 60.363 37.037 0.96 0.00 36.12 2.32
2778 3988 7.698130 CCAAATATTCGTCTTTCTGGACATTTC 59.302 37.037 0.00 0.00 36.12 2.17
2779 3989 7.921786 AATATTCGTCTTTCTGGACATTTCA 57.078 32.000 0.00 0.00 36.12 2.69
2780 3990 7.921786 ATATTCGTCTTTCTGGACATTTCAA 57.078 32.000 0.00 0.00 36.12 2.69
2781 3991 6.633500 ATTCGTCTTTCTGGACATTTCAAA 57.367 33.333 0.00 0.00 36.12 2.69
2782 3992 6.633500 TTCGTCTTTCTGGACATTTCAAAT 57.367 33.333 0.00 0.00 36.12 2.32
2783 3993 6.000891 TCGTCTTTCTGGACATTTCAAATG 57.999 37.500 8.67 8.67 36.12 2.32
2784 3994 5.048782 TCGTCTTTCTGGACATTTCAAATGG 60.049 40.000 14.70 0.00 36.12 3.16
2785 3995 5.278463 CGTCTTTCTGGACATTTCAAATGGT 60.278 40.000 14.70 0.33 36.12 3.55
2786 3996 6.515832 GTCTTTCTGGACATTTCAAATGGTT 58.484 36.000 14.70 0.00 36.35 3.67
2787 3997 7.521423 CGTCTTTCTGGACATTTCAAATGGTTA 60.521 37.037 14.70 0.00 36.12 2.85
2788 3998 7.809806 GTCTTTCTGGACATTTCAAATGGTTAG 59.190 37.037 14.70 8.78 36.35 2.34
2789 3999 7.723616 TCTTTCTGGACATTTCAAATGGTTAGA 59.276 33.333 14.70 10.73 0.00 2.10
2790 4000 7.831691 TTCTGGACATTTCAAATGGTTAGAA 57.168 32.000 14.70 15.19 0.00 2.10
2791 4001 7.214467 TCTGGACATTTCAAATGGTTAGAAC 57.786 36.000 14.70 0.00 0.00 3.01
2792 4002 6.775142 TCTGGACATTTCAAATGGTTAGAACA 59.225 34.615 14.70 2.28 0.00 3.18
2793 4003 7.451255 TCTGGACATTTCAAATGGTTAGAACAT 59.549 33.333 14.70 0.00 0.00 2.71
2794 4004 8.642935 TGGACATTTCAAATGGTTAGAACATA 57.357 30.769 14.70 0.00 0.00 2.29
2795 4005 9.253832 TGGACATTTCAAATGGTTAGAACATAT 57.746 29.630 14.70 0.00 0.00 1.78
2796 4006 9.520204 GGACATTTCAAATGGTTAGAACATATG 57.480 33.333 14.70 0.00 0.00 1.78
2797 4007 9.520204 GACATTTCAAATGGTTAGAACATATGG 57.480 33.333 14.70 0.00 0.00 2.74
2798 4008 9.253832 ACATTTCAAATGGTTAGAACATATGGA 57.746 29.630 14.70 0.00 0.00 3.41
2802 4012 9.913310 TTCAAATGGTTAGAACATATGGATGTA 57.087 29.630 7.80 0.00 45.93 2.29
2805 4015 9.866655 AAATGGTTAGAACATATGGATGTATGT 57.133 29.630 7.80 0.00 45.93 2.29
2808 4018 9.374711 TGGTTAGAACATATGGATGTATGTAGA 57.625 33.333 7.80 0.00 45.93 2.59
2809 4019 9.640963 GGTTAGAACATATGGATGTATGTAGAC 57.359 37.037 7.80 0.00 45.93 2.59
2843 4053 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
2844 4054 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
2845 4055 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
2846 4056 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
2847 4057 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
2848 4058 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
2849 4059 4.340894 TCACTCATTTTGCTTCGTATGC 57.659 40.909 0.00 0.00 0.00 3.14
2850 4060 3.750652 TCACTCATTTTGCTTCGTATGCA 59.249 39.130 0.00 0.00 38.80 3.96
2851 4061 4.093514 CACTCATTTTGCTTCGTATGCAG 58.906 43.478 0.00 0.00 41.71 4.41
2852 4062 3.753272 ACTCATTTTGCTTCGTATGCAGT 59.247 39.130 0.00 0.00 41.71 4.40
2853 4063 4.142816 ACTCATTTTGCTTCGTATGCAGTC 60.143 41.667 0.00 0.00 41.71 3.51
2854 4064 3.750652 TCATTTTGCTTCGTATGCAGTCA 59.249 39.130 0.00 0.00 41.71 3.41
2855 4065 4.395854 TCATTTTGCTTCGTATGCAGTCAT 59.604 37.500 0.00 0.00 41.71 3.06
2856 4066 4.764679 TTTTGCTTCGTATGCAGTCATT 57.235 36.364 0.00 0.00 41.71 2.57
2857 4067 4.764679 TTTGCTTCGTATGCAGTCATTT 57.235 36.364 0.00 0.00 41.71 2.32
2858 4068 3.745332 TGCTTCGTATGCAGTCATTTG 57.255 42.857 0.00 0.00 35.31 2.32
2859 4069 3.073678 TGCTTCGTATGCAGTCATTTGT 58.926 40.909 0.00 0.00 35.31 2.83
2860 4070 3.501828 TGCTTCGTATGCAGTCATTTGTT 59.498 39.130 0.00 0.00 35.31 2.83
2861 4071 3.848019 GCTTCGTATGCAGTCATTTGTTG 59.152 43.478 0.00 0.00 34.22 3.33
2862 4072 4.378356 GCTTCGTATGCAGTCATTTGTTGA 60.378 41.667 0.00 0.00 34.22 3.18
2863 4073 5.681337 TTCGTATGCAGTCATTTGTTGAA 57.319 34.783 0.00 0.00 35.70 2.69
2864 4074 5.681337 TCGTATGCAGTCATTTGTTGAAA 57.319 34.783 0.00 0.00 35.70 2.69
2865 4075 6.252967 TCGTATGCAGTCATTTGTTGAAAT 57.747 33.333 0.00 0.00 35.70 2.17
2866 4076 6.314018 TCGTATGCAGTCATTTGTTGAAATC 58.686 36.000 0.00 0.00 35.70 2.17
2867 4077 6.149308 TCGTATGCAGTCATTTGTTGAAATCT 59.851 34.615 0.00 0.00 35.70 2.40
2868 4078 6.467047 CGTATGCAGTCATTTGTTGAAATCTC 59.533 38.462 0.00 0.00 35.70 2.75
2869 4079 6.585695 ATGCAGTCATTTGTTGAAATCTCT 57.414 33.333 0.00 0.00 35.70 3.10
2870 4080 7.692460 ATGCAGTCATTTGTTGAAATCTCTA 57.308 32.000 0.00 0.00 35.70 2.43
2871 4081 7.137490 TGCAGTCATTTGTTGAAATCTCTAG 57.863 36.000 0.00 0.00 35.70 2.43
2872 4082 6.936335 TGCAGTCATTTGTTGAAATCTCTAGA 59.064 34.615 0.00 0.00 35.70 2.43
2873 4083 7.445096 TGCAGTCATTTGTTGAAATCTCTAGAA 59.555 33.333 0.00 0.00 35.70 2.10
2874 4084 8.292448 GCAGTCATTTGTTGAAATCTCTAGAAA 58.708 33.333 0.00 0.00 35.70 2.52
2875 4085 9.823098 CAGTCATTTGTTGAAATCTCTAGAAAG 57.177 33.333 0.00 0.00 35.70 2.62
2876 4086 9.784531 AGTCATTTGTTGAAATCTCTAGAAAGA 57.215 29.630 0.00 0.00 35.70 2.52
2877 4087 9.818796 GTCATTTGTTGAAATCTCTAGAAAGAC 57.181 33.333 0.00 0.00 35.70 3.01
2878 4088 9.559732 TCATTTGTTGAAATCTCTAGAAAGACA 57.440 29.630 0.00 0.00 28.65 3.41
2891 4101 9.449719 TCTCTAGAAAGACAAATATTTGGGAAC 57.550 33.333 27.43 16.80 42.34 3.62
2892 4102 8.263940 TCTAGAAAGACAAATATTTGGGAACG 57.736 34.615 27.43 11.14 42.34 3.95
2893 4103 6.267496 AGAAAGACAAATATTTGGGAACGG 57.733 37.500 27.43 5.66 42.34 4.44
2894 4104 6.007703 AGAAAGACAAATATTTGGGAACGGA 58.992 36.000 27.43 0.00 42.34 4.69
2895 4105 5.897377 AAGACAAATATTTGGGAACGGAG 57.103 39.130 27.43 4.34 42.34 4.63
2896 4106 4.270008 AGACAAATATTTGGGAACGGAGG 58.730 43.478 27.43 3.68 42.34 4.30
2897 4107 3.361786 ACAAATATTTGGGAACGGAGGG 58.638 45.455 27.43 3.22 42.34 4.30
2898 4108 3.010808 ACAAATATTTGGGAACGGAGGGA 59.989 43.478 27.43 0.00 42.34 4.20
2899 4109 3.577805 AATATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
2910 4120 5.494724 GGAACGGAGGGAGTATAACTTTTT 58.505 41.667 0.00 0.00 0.00 1.94
2911 4121 5.583854 GGAACGGAGGGAGTATAACTTTTTC 59.416 44.000 0.00 0.00 0.00 2.29
2914 4124 6.871844 ACGGAGGGAGTATAACTTTTTCTAC 58.128 40.000 0.00 0.00 0.00 2.59
2915 4125 6.438425 ACGGAGGGAGTATAACTTTTTCTACA 59.562 38.462 0.00 0.00 0.00 2.74
3058 4269 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
3075 4286 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
3096 4307 4.735599 GACCCTTCCCCGGACCCT 62.736 72.222 0.73 0.00 0.00 4.34
3140 4351 1.471287 CGGGCTGCCCTTAGTTAAAAC 59.529 52.381 33.39 4.65 42.67 2.43
3146 4357 4.086457 CTGCCCTTAGTTAAAACCATGGT 58.914 43.478 13.00 13.00 0.00 3.55
3190 4401 4.482952 AGGGAACTAATAAACCAGGACG 57.517 45.455 0.00 0.00 40.61 4.79
3227 4438 7.981789 TCTCTCTGTAAAGTGTAAGCCATATTG 59.018 37.037 0.00 0.00 0.00 1.90
3513 4724 4.618920 TTGGAGGACAAACTCTACCTTC 57.381 45.455 0.00 0.00 35.79 3.46
3753 4964 1.200020 GCTGAAGCATGGTTGTGGTAC 59.800 52.381 16.18 0.00 41.59 3.34
4018 5229 7.889469 AGTAAAACCTCTTACACAGACGAATA 58.111 34.615 0.00 0.00 34.75 1.75
4107 5318 1.271379 TGGTTCTAGGCTTCCACTTGC 60.271 52.381 0.00 0.00 0.00 4.01
4201 5412 1.768870 AGGACTTGCACCTGTTACACT 59.231 47.619 0.00 0.00 36.30 3.55
4264 5475 6.750039 CCTGTACAAATCACGTTTTCTTTTGT 59.250 34.615 0.00 12.66 41.76 2.83
4284 5495 4.985538 TGTTTGGAAGGAGCAGTATTCTT 58.014 39.130 0.00 0.00 0.00 2.52
4297 5508 7.554476 GGAGCAGTATTCTTCTTCCATTTTACT 59.446 37.037 0.00 0.00 0.00 2.24
4320 5532 3.782656 ATGAACGTTACCTCCCAACTT 57.217 42.857 0.00 0.00 0.00 2.66
4352 5564 6.441093 TTCAAGTGCAATCTTATCCATGAC 57.559 37.500 0.00 0.00 0.00 3.06
4358 5570 8.701908 AGTGCAATCTTATCCATGACAATTAT 57.298 30.769 0.00 0.00 0.00 1.28
4405 5617 4.322101 CGCTGTTACAAACTGTGTATCC 57.678 45.455 0.00 0.00 42.37 2.59
4464 5676 2.636893 ACTGTCATCTGTTCCAAGCTCT 59.363 45.455 0.00 0.00 0.00 4.09
4518 5730 8.554490 TTTTTCTAGAGAACATATCTAGCCCT 57.446 34.615 4.54 0.00 43.94 5.19
4519 5731 7.531857 TTTCTAGAGAACATATCTAGCCCTG 57.468 40.000 4.54 0.00 43.94 4.45
4689 5913 7.923414 AATTACATCAAGTCCTTTGTAGTCC 57.077 36.000 0.00 0.00 38.01 3.85
4694 5918 5.825593 TCAAGTCCTTTGTAGTCCTTGAT 57.174 39.130 0.00 0.00 38.01 2.57
4706 5930 8.547481 TTGTAGTCCTTGATTCTACATCCATA 57.453 34.615 5.34 0.00 41.94 2.74
4728 5952 8.019669 CCATATCTTGCATCTTAATTTTCCTCG 58.980 37.037 0.00 0.00 0.00 4.63
4739 5968 9.968870 ATCTTAATTTTCCTCGTACATCTAGTC 57.031 33.333 0.00 0.00 0.00 2.59
4773 6002 2.862541 AGACCAAACATGCACAAGCTA 58.137 42.857 0.00 0.00 42.74 3.32
4779 6008 5.243730 ACCAAACATGCACAAGCTAAACTAT 59.756 36.000 0.00 0.00 42.74 2.12
4812 6042 8.329502 AGGTTTAAAGAGTGCTCCTAATAACAT 58.670 33.333 0.00 0.00 0.00 2.71
4839 6069 1.068055 ACCTAAGATCGTTGAACGCGT 60.068 47.619 13.62 5.58 42.21 6.01
4841 6071 1.249491 CTAAGATCGTTGAACGCGTCG 59.751 52.381 14.44 12.59 42.21 5.12
4878 6108 3.550678 GGTTTAAAGAGTCGTATGAGCCG 59.449 47.826 0.00 0.00 0.00 5.52
4896 6126 0.526211 CGCACACTCCTAGCACAGTA 59.474 55.000 0.00 0.00 0.00 2.74
4914 6144 6.426937 GCACAGTAAGAACCTAAGATTGTTGA 59.573 38.462 0.00 0.00 0.00 3.18
4943 6174 2.270986 GCTGAAGGCACACCCCTTG 61.271 63.158 0.00 0.00 45.03 3.61
4956 6187 1.247567 CCCCTTGCGAGAAATGTTGT 58.752 50.000 1.22 0.00 0.00 3.32
4963 6194 5.277779 CCTTGCGAGAAATGTTGTCAAACTA 60.278 40.000 1.22 0.00 37.19 2.24
4980 6211 9.263538 TGTCAAACTAATACTTTGTTGTCGTAT 57.736 29.630 0.00 0.00 31.63 3.06
4985 6216 9.485206 AACTAATACTTTGTTGTCGTATTGTCT 57.515 29.630 0.00 0.00 35.90 3.41
4988 6219 4.699637 ACTTTGTTGTCGTATTGTCTGGA 58.300 39.130 0.00 0.00 0.00 3.86
5000 6231 0.685097 TGTCTGGAAAGAAGACCGGG 59.315 55.000 6.32 0.00 42.85 5.73
5022 6253 5.940470 GGGAGCACAAAAGAAAGAATCTCTA 59.060 40.000 0.00 0.00 37.42 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.583593 GCTAGACGCAAGAGCCGG 60.584 66.667 0.00 0.00 43.62 6.13
1 2 2.583593 GGCTAGACGCAAGAGCCG 60.584 66.667 0.00 0.00 43.72 5.52
3 4 0.031449 CTAGGGCTAGACGCAAGAGC 59.969 60.000 0.00 0.00 41.67 4.09
4 5 1.606668 CTCTAGGGCTAGACGCAAGAG 59.393 57.143 6.19 6.19 41.67 2.85
5 6 1.212195 TCTCTAGGGCTAGACGCAAGA 59.788 52.381 0.00 0.00 41.67 3.02
6 7 1.681538 TCTCTAGGGCTAGACGCAAG 58.318 55.000 0.00 0.00 41.67 4.01
7 8 2.362397 CAATCTCTAGGGCTAGACGCAA 59.638 50.000 0.00 0.00 41.67 4.85
8 9 1.957177 CAATCTCTAGGGCTAGACGCA 59.043 52.381 0.00 0.00 41.67 5.24
9 10 1.957877 ACAATCTCTAGGGCTAGACGC 59.042 52.381 0.00 0.00 37.28 5.19
10 11 4.339814 AGAAACAATCTCTAGGGCTAGACG 59.660 45.833 0.00 0.00 37.28 4.18
11 12 5.862678 AGAAACAATCTCTAGGGCTAGAC 57.137 43.478 0.00 0.00 37.28 2.59
12 13 6.198639 AGAAGAAACAATCTCTAGGGCTAGA 58.801 40.000 0.00 0.00 37.42 2.43
13 14 6.478512 AGAAGAAACAATCTCTAGGGCTAG 57.521 41.667 0.00 0.00 37.42 3.42
14 15 6.644347 CAAGAAGAAACAATCTCTAGGGCTA 58.356 40.000 0.00 0.00 37.42 3.93
15 16 5.495640 CAAGAAGAAACAATCTCTAGGGCT 58.504 41.667 0.00 0.00 37.42 5.19
16 17 4.095632 GCAAGAAGAAACAATCTCTAGGGC 59.904 45.833 0.00 0.00 37.42 5.19
17 18 5.495640 AGCAAGAAGAAACAATCTCTAGGG 58.504 41.667 0.00 0.00 37.42 3.53
18 19 6.429385 ACAAGCAAGAAGAAACAATCTCTAGG 59.571 38.462 0.00 0.00 37.42 3.02
19 20 7.360776 GGACAAGCAAGAAGAAACAATCTCTAG 60.361 40.741 0.00 0.00 37.42 2.43
20 21 6.428159 GGACAAGCAAGAAGAAACAATCTCTA 59.572 38.462 0.00 0.00 37.42 2.43
21 22 5.240403 GGACAAGCAAGAAGAAACAATCTCT 59.760 40.000 0.00 0.00 37.42 3.10
22 23 5.456265 GGACAAGCAAGAAGAAACAATCTC 58.544 41.667 0.00 0.00 37.42 2.75
23 24 4.279420 GGGACAAGCAAGAAGAAACAATCT 59.721 41.667 0.00 0.00 41.32 2.40
24 25 4.279420 AGGGACAAGCAAGAAGAAACAATC 59.721 41.667 0.00 0.00 0.00 2.67
25 26 4.218312 AGGGACAAGCAAGAAGAAACAAT 58.782 39.130 0.00 0.00 0.00 2.71
26 27 3.631250 AGGGACAAGCAAGAAGAAACAA 58.369 40.909 0.00 0.00 0.00 2.83
27 28 3.117888 AGAGGGACAAGCAAGAAGAAACA 60.118 43.478 0.00 0.00 0.00 2.83
28 29 3.481453 AGAGGGACAAGCAAGAAGAAAC 58.519 45.455 0.00 0.00 0.00 2.78
29 30 3.864789 AGAGGGACAAGCAAGAAGAAA 57.135 42.857 0.00 0.00 0.00 2.52
30 31 3.864789 AAGAGGGACAAGCAAGAAGAA 57.135 42.857 0.00 0.00 0.00 2.52
31 32 3.480470 CAAAGAGGGACAAGCAAGAAGA 58.520 45.455 0.00 0.00 0.00 2.87
32 33 2.555757 CCAAAGAGGGACAAGCAAGAAG 59.444 50.000 0.00 0.00 0.00 2.85
33 34 2.586425 CCAAAGAGGGACAAGCAAGAA 58.414 47.619 0.00 0.00 0.00 2.52
34 35 2.276732 CCAAAGAGGGACAAGCAAGA 57.723 50.000 0.00 0.00 0.00 3.02
55 56 0.473886 TATAAGGAGGGGCAGGGCTC 60.474 60.000 0.00 0.00 0.00 4.70
56 57 0.197145 ATATAAGGAGGGGCAGGGCT 59.803 55.000 0.00 0.00 0.00 5.19
57 58 1.966845 TATATAAGGAGGGGCAGGGC 58.033 55.000 0.00 0.00 0.00 5.19
58 59 3.464828 ACATATATAAGGAGGGGCAGGG 58.535 50.000 0.00 0.00 0.00 4.45
59 60 4.536090 TCAACATATATAAGGAGGGGCAGG 59.464 45.833 0.00 0.00 0.00 4.85
60 61 5.762179 TCAACATATATAAGGAGGGGCAG 57.238 43.478 0.00 0.00 0.00 4.85
61 62 5.014123 CCTTCAACATATATAAGGAGGGGCA 59.986 44.000 6.23 0.00 40.85 5.36
62 63 5.501156 CCTTCAACATATATAAGGAGGGGC 58.499 45.833 6.23 0.00 40.85 5.80
63 64 5.044846 CCCCTTCAACATATATAAGGAGGGG 60.045 48.000 21.08 21.08 44.27 4.79
64 65 5.573707 GCCCCTTCAACATATATAAGGAGGG 60.574 48.000 11.97 13.04 40.85 4.30
65 66 5.501156 GCCCCTTCAACATATATAAGGAGG 58.499 45.833 11.97 11.72 40.85 4.30
66 67 5.178797 CGCCCCTTCAACATATATAAGGAG 58.821 45.833 11.97 2.36 40.85 3.69
67 68 4.019681 CCGCCCCTTCAACATATATAAGGA 60.020 45.833 11.97 0.00 40.85 3.36
68 69 4.261801 CCGCCCCTTCAACATATATAAGG 58.738 47.826 5.36 5.36 38.58 2.69
69 70 4.261801 CCCGCCCCTTCAACATATATAAG 58.738 47.826 0.00 0.00 0.00 1.73
70 71 3.653836 ACCCGCCCCTTCAACATATATAA 59.346 43.478 0.00 0.00 0.00 0.98
71 72 3.253220 ACCCGCCCCTTCAACATATATA 58.747 45.455 0.00 0.00 0.00 0.86
72 73 2.062636 ACCCGCCCCTTCAACATATAT 58.937 47.619 0.00 0.00 0.00 0.86
73 74 1.513858 ACCCGCCCCTTCAACATATA 58.486 50.000 0.00 0.00 0.00 0.86
74 75 0.629058 AACCCGCCCCTTCAACATAT 59.371 50.000 0.00 0.00 0.00 1.78
75 76 1.065272 GTAACCCGCCCCTTCAACATA 60.065 52.381 0.00 0.00 0.00 2.29
76 77 0.323087 GTAACCCGCCCCTTCAACAT 60.323 55.000 0.00 0.00 0.00 2.71
77 78 1.073548 GTAACCCGCCCCTTCAACA 59.926 57.895 0.00 0.00 0.00 3.33
78 79 0.323087 ATGTAACCCGCCCCTTCAAC 60.323 55.000 0.00 0.00 0.00 3.18
79 80 0.322997 CATGTAACCCGCCCCTTCAA 60.323 55.000 0.00 0.00 0.00 2.69
80 81 1.301623 CATGTAACCCGCCCCTTCA 59.698 57.895 0.00 0.00 0.00 3.02
81 82 1.029947 CACATGTAACCCGCCCCTTC 61.030 60.000 0.00 0.00 0.00 3.46
82 83 1.001393 CACATGTAACCCGCCCCTT 60.001 57.895 0.00 0.00 0.00 3.95
83 84 2.674754 CACATGTAACCCGCCCCT 59.325 61.111 0.00 0.00 0.00 4.79
84 85 2.439519 CCACATGTAACCCGCCCC 60.440 66.667 0.00 0.00 0.00 5.80
85 86 1.451387 CTCCACATGTAACCCGCCC 60.451 63.158 0.00 0.00 0.00 6.13
86 87 0.743345 GACTCCACATGTAACCCGCC 60.743 60.000 0.00 0.00 0.00 6.13
87 88 0.743345 GGACTCCACATGTAACCCGC 60.743 60.000 0.00 0.00 0.00 6.13
88 89 0.902531 AGGACTCCACATGTAACCCG 59.097 55.000 0.00 0.00 0.00 5.28
89 90 4.772886 AATAGGACTCCACATGTAACCC 57.227 45.455 0.00 0.00 0.00 4.11
90 91 5.601313 TCCTAATAGGACTCCACATGTAACC 59.399 44.000 4.61 0.00 40.06 2.85
91 92 6.726490 TCCTAATAGGACTCCACATGTAAC 57.274 41.667 4.61 0.00 40.06 2.50
105 106 8.838741 AGGTAGACTAGTCCTAATCCTAATAGG 58.161 40.741 19.38 0.00 41.14 2.57
108 109 8.962205 AGAAGGTAGACTAGTCCTAATCCTAAT 58.038 37.037 19.38 9.00 0.00 1.73
109 110 8.347557 AGAAGGTAGACTAGTCCTAATCCTAA 57.652 38.462 19.38 0.00 0.00 2.69
110 111 7.951157 AGAAGGTAGACTAGTCCTAATCCTA 57.049 40.000 19.38 0.49 0.00 2.94
111 112 6.851965 AGAAGGTAGACTAGTCCTAATCCT 57.148 41.667 19.38 15.40 0.00 3.24
117 118 9.187996 GTTTGTATTAGAAGGTAGACTAGTCCT 57.812 37.037 19.38 7.54 0.00 3.85
118 119 8.412456 GGTTTGTATTAGAAGGTAGACTAGTCC 58.588 40.741 19.38 5.07 0.00 3.85
119 120 8.127954 CGGTTTGTATTAGAAGGTAGACTAGTC 58.872 40.741 15.41 15.41 0.00 2.59
120 121 7.067981 CCGGTTTGTATTAGAAGGTAGACTAGT 59.932 40.741 0.00 0.00 0.00 2.57
121 122 7.284034 TCCGGTTTGTATTAGAAGGTAGACTAG 59.716 40.741 0.00 0.00 0.00 2.57
122 123 7.118723 TCCGGTTTGTATTAGAAGGTAGACTA 58.881 38.462 0.00 0.00 0.00 2.59
123 124 5.954150 TCCGGTTTGTATTAGAAGGTAGACT 59.046 40.000 0.00 0.00 0.00 3.24
124 125 6.212888 TCCGGTTTGTATTAGAAGGTAGAC 57.787 41.667 0.00 0.00 0.00 2.59
125 126 7.560991 TGTATCCGGTTTGTATTAGAAGGTAGA 59.439 37.037 0.00 0.00 0.00 2.59
126 127 7.719483 TGTATCCGGTTTGTATTAGAAGGTAG 58.281 38.462 0.00 0.00 0.00 3.18
127 128 7.658525 TGTATCCGGTTTGTATTAGAAGGTA 57.341 36.000 0.00 0.00 0.00 3.08
128 129 6.549433 TGTATCCGGTTTGTATTAGAAGGT 57.451 37.500 0.00 0.00 0.00 3.50
129 130 7.046033 ACTTGTATCCGGTTTGTATTAGAAGG 58.954 38.462 0.00 0.00 0.00 3.46
130 131 7.224167 GGACTTGTATCCGGTTTGTATTAGAAG 59.776 40.741 0.00 0.00 0.00 2.85
131 132 7.043565 GGACTTGTATCCGGTTTGTATTAGAA 58.956 38.462 0.00 0.00 0.00 2.10
132 133 6.576185 GGACTTGTATCCGGTTTGTATTAGA 58.424 40.000 0.00 0.00 0.00 2.10
133 134 6.839820 GGACTTGTATCCGGTTTGTATTAG 57.160 41.667 0.00 0.00 0.00 1.73
145 146 3.431346 GGTTAAGACCCGGACTTGTATCC 60.431 52.174 19.14 13.12 40.25 2.59
146 147 3.790091 GGTTAAGACCCGGACTTGTATC 58.210 50.000 19.14 7.89 40.25 2.24
147 148 3.900966 GGTTAAGACCCGGACTTGTAT 57.099 47.619 19.14 0.00 40.25 2.29
169 170 9.574516 AGGCATAAGGAATATTTACCTTACAAG 57.425 33.333 14.72 10.45 46.82 3.16
170 171 9.930158 AAGGCATAAGGAATATTTACCTTACAA 57.070 29.630 14.72 0.38 46.82 2.41
171 172 9.930158 AAAGGCATAAGGAATATTTACCTTACA 57.070 29.630 14.72 0.96 46.82 2.41
174 175 8.289544 AGGAAAGGCATAAGGAATATTTACCTT 58.710 33.333 11.91 11.91 46.45 3.50
175 176 7.826747 AGGAAAGGCATAAGGAATATTTACCT 58.173 34.615 0.00 0.00 38.23 3.08
176 177 8.360390 CAAGGAAAGGCATAAGGAATATTTACC 58.640 37.037 0.00 0.00 0.00 2.85
177 178 8.914011 ACAAGGAAAGGCATAAGGAATATTTAC 58.086 33.333 0.00 0.00 0.00 2.01
179 180 7.978099 ACAAGGAAAGGCATAAGGAATATTT 57.022 32.000 0.00 0.00 0.00 1.40
180 181 9.487442 TTTACAAGGAAAGGCATAAGGAATATT 57.513 29.630 0.00 0.00 0.00 1.28
181 182 8.914011 GTTTACAAGGAAAGGCATAAGGAATAT 58.086 33.333 0.00 0.00 0.00 1.28
182 183 7.340999 GGTTTACAAGGAAAGGCATAAGGAATA 59.659 37.037 0.00 0.00 0.00 1.75
183 184 6.154534 GGTTTACAAGGAAAGGCATAAGGAAT 59.845 38.462 0.00 0.00 0.00 3.01
184 185 5.479027 GGTTTACAAGGAAAGGCATAAGGAA 59.521 40.000 0.00 0.00 0.00 3.36
185 186 5.014202 GGTTTACAAGGAAAGGCATAAGGA 58.986 41.667 0.00 0.00 0.00 3.36
186 187 4.142469 CGGTTTACAAGGAAAGGCATAAGG 60.142 45.833 0.00 0.00 0.00 2.69
187 188 4.142469 CCGGTTTACAAGGAAAGGCATAAG 60.142 45.833 0.00 0.00 0.00 1.73
188 189 3.759618 CCGGTTTACAAGGAAAGGCATAA 59.240 43.478 0.00 0.00 0.00 1.90
189 190 3.349022 CCGGTTTACAAGGAAAGGCATA 58.651 45.455 0.00 0.00 0.00 3.14
190 191 2.167662 CCGGTTTACAAGGAAAGGCAT 58.832 47.619 0.00 0.00 0.00 4.40
191 192 1.611519 CCGGTTTACAAGGAAAGGCA 58.388 50.000 0.00 0.00 0.00 4.75
192 193 0.242825 GCCGGTTTACAAGGAAAGGC 59.757 55.000 1.90 0.00 36.32 4.35
193 194 0.885879 GGCCGGTTTACAAGGAAAGG 59.114 55.000 1.90 0.00 0.00 3.11
194 195 0.885879 GGGCCGGTTTACAAGGAAAG 59.114 55.000 1.90 0.00 0.00 2.62
195 196 0.185416 TGGGCCGGTTTACAAGGAAA 59.815 50.000 1.90 0.00 0.00 3.13
196 197 0.537828 GTGGGCCGGTTTACAAGGAA 60.538 55.000 1.90 0.00 0.00 3.36
197 198 1.073548 GTGGGCCGGTTTACAAGGA 59.926 57.895 1.90 0.00 0.00 3.36
198 199 1.974875 GGTGGGCCGGTTTACAAGG 60.975 63.158 1.90 0.00 0.00 3.61
199 200 0.610785 ATGGTGGGCCGGTTTACAAG 60.611 55.000 1.90 0.00 37.67 3.16
200 201 0.697079 TATGGTGGGCCGGTTTACAA 59.303 50.000 1.90 0.00 37.67 2.41
201 202 0.253610 CTATGGTGGGCCGGTTTACA 59.746 55.000 1.90 0.00 37.67 2.41
202 203 0.253894 ACTATGGTGGGCCGGTTTAC 59.746 55.000 1.90 0.00 37.67 2.01
203 204 1.876849 TACTATGGTGGGCCGGTTTA 58.123 50.000 1.90 0.00 37.67 2.01
204 205 1.133915 CATACTATGGTGGGCCGGTTT 60.134 52.381 1.90 0.00 37.67 3.27
205 206 0.472471 CATACTATGGTGGGCCGGTT 59.528 55.000 1.90 0.00 37.67 4.44
206 207 0.399376 TCATACTATGGTGGGCCGGT 60.399 55.000 1.90 0.00 37.67 5.28
207 208 0.321671 CTCATACTATGGTGGGCCGG 59.678 60.000 0.00 0.00 37.67 6.13
208 209 0.320771 GCTCATACTATGGTGGGCCG 60.321 60.000 0.00 0.00 37.67 6.13
209 210 0.036875 GGCTCATACTATGGTGGGCC 59.963 60.000 0.00 0.00 0.00 5.80
210 211 0.320771 CGGCTCATACTATGGTGGGC 60.321 60.000 0.00 0.00 0.00 5.36
211 212 0.321671 CCGGCTCATACTATGGTGGG 59.678 60.000 0.00 0.00 0.00 4.61
212 213 0.320771 GCCGGCTCATACTATGGTGG 60.321 60.000 22.15 0.00 0.00 4.61
213 214 0.320771 GGCCGGCTCATACTATGGTG 60.321 60.000 28.56 0.00 0.00 4.17
214 215 0.471971 AGGCCGGCTCATACTATGGT 60.472 55.000 28.56 0.00 0.00 3.55
215 216 0.687354 AAGGCCGGCTCATACTATGG 59.313 55.000 28.56 0.00 0.00 2.74
216 217 2.224281 TGAAAGGCCGGCTCATACTATG 60.224 50.000 28.56 0.00 0.00 2.23
217 218 2.047061 TGAAAGGCCGGCTCATACTAT 58.953 47.619 28.56 3.98 0.00 2.12
218 219 1.491668 TGAAAGGCCGGCTCATACTA 58.508 50.000 28.56 4.25 0.00 1.82
219 220 0.839946 ATGAAAGGCCGGCTCATACT 59.160 50.000 28.56 11.88 0.00 2.12
220 221 0.947244 CATGAAAGGCCGGCTCATAC 59.053 55.000 28.56 9.28 0.00 2.39
221 222 0.836606 TCATGAAAGGCCGGCTCATA 59.163 50.000 28.56 12.97 0.00 2.15
222 223 0.034186 TTCATGAAAGGCCGGCTCAT 60.034 50.000 28.56 24.01 0.00 2.90
223 224 0.960364 GTTCATGAAAGGCCGGCTCA 60.960 55.000 28.56 22.75 0.00 4.26
224 225 1.657751 GGTTCATGAAAGGCCGGCTC 61.658 60.000 28.56 17.20 0.00 4.70
225 226 1.678970 GGTTCATGAAAGGCCGGCT 60.679 57.895 28.56 6.33 0.00 5.52
226 227 2.885113 GGTTCATGAAAGGCCGGC 59.115 61.111 21.18 21.18 0.00 6.13
227 228 3.051392 GCGGTTCATGAAAGGCCGG 62.051 63.158 27.50 14.48 42.34 6.13
228 229 1.982073 GAGCGGTTCATGAAAGGCCG 61.982 60.000 24.31 24.31 44.60 6.13
229 230 1.803289 GAGCGGTTCATGAAAGGCC 59.197 57.895 21.78 13.80 0.00 5.19
230 231 1.298859 ACGAGCGGTTCATGAAAGGC 61.299 55.000 19.20 19.20 0.00 4.35
231 232 1.135972 CAACGAGCGGTTCATGAAAGG 60.136 52.381 10.35 6.18 36.49 3.11
232 233 1.135972 CCAACGAGCGGTTCATGAAAG 60.136 52.381 10.35 8.69 36.49 2.62
233 234 0.871722 CCAACGAGCGGTTCATGAAA 59.128 50.000 10.35 0.00 36.49 2.69
234 235 0.953471 CCCAACGAGCGGTTCATGAA 60.953 55.000 3.38 3.38 36.49 2.57
235 236 1.375396 CCCAACGAGCGGTTCATGA 60.375 57.895 0.00 0.00 36.49 3.07
236 237 3.039202 GCCCAACGAGCGGTTCATG 62.039 63.158 0.00 0.00 36.49 3.07
237 238 2.746277 GCCCAACGAGCGGTTCAT 60.746 61.111 0.00 0.00 36.49 2.57
248 249 4.280019 AAGACCCGGTGGCCCAAC 62.280 66.667 0.00 0.00 33.59 3.77
249 250 4.278513 CAAGACCCGGTGGCCCAA 62.279 66.667 0.00 0.00 33.59 4.12
251 252 4.717313 GACAAGACCCGGTGGCCC 62.717 72.222 0.00 0.00 33.59 5.80
254 255 3.934391 GAGCGACAAGACCCGGTGG 62.934 68.421 0.00 0.00 36.60 4.61
255 256 2.432628 GAGCGACAAGACCCGGTG 60.433 66.667 0.00 0.00 36.60 4.94
256 257 3.692406 GGAGCGACAAGACCCGGT 61.692 66.667 0.00 0.00 39.33 5.28
257 258 3.358076 GAGGAGCGACAAGACCCGG 62.358 68.421 0.00 0.00 0.00 5.73
258 259 2.182030 GAGGAGCGACAAGACCCG 59.818 66.667 0.00 0.00 0.00 5.28
259 260 1.216710 CAGAGGAGCGACAAGACCC 59.783 63.158 0.00 0.00 0.00 4.46
260 261 0.109039 GTCAGAGGAGCGACAAGACC 60.109 60.000 0.00 0.00 32.24 3.85
261 262 0.109039 GGTCAGAGGAGCGACAAGAC 60.109 60.000 0.00 0.00 33.66 3.01
262 263 1.251527 GGGTCAGAGGAGCGACAAGA 61.252 60.000 0.00 0.00 42.46 3.02
263 264 1.216710 GGGTCAGAGGAGCGACAAG 59.783 63.158 0.00 0.00 42.46 3.16
264 265 2.636412 CGGGTCAGAGGAGCGACAA 61.636 63.158 0.00 0.00 42.46 3.18
265 266 3.062466 CGGGTCAGAGGAGCGACA 61.062 66.667 0.00 0.00 42.46 4.35
266 267 4.500116 GCGGGTCAGAGGAGCGAC 62.500 72.222 0.00 0.00 42.46 5.19
269 270 4.154347 CAGGCGGGTCAGAGGAGC 62.154 72.222 0.00 0.00 40.81 4.70
270 271 4.154347 GCAGGCGGGTCAGAGGAG 62.154 72.222 0.00 0.00 0.00 3.69
277 278 3.857038 TAATCCGGCAGGCGGGTC 61.857 66.667 33.26 0.00 37.63 4.46
278 279 4.171103 GTAATCCGGCAGGCGGGT 62.171 66.667 33.26 26.29 37.63 5.28
279 280 4.929707 GGTAATCCGGCAGGCGGG 62.930 72.222 33.26 21.90 37.47 6.13
280 281 2.958578 ATTGGTAATCCGGCAGGCGG 62.959 60.000 29.26 29.26 37.47 6.13
281 282 1.525995 ATTGGTAATCCGGCAGGCG 60.526 57.895 9.96 9.96 37.47 5.52
282 283 0.465460 TCATTGGTAATCCGGCAGGC 60.465 55.000 0.00 0.00 37.47 4.85
283 284 2.051334 TTCATTGGTAATCCGGCAGG 57.949 50.000 0.00 0.00 36.30 4.85
284 285 2.224079 CGATTCATTGGTAATCCGGCAG 59.776 50.000 0.00 0.00 36.30 4.85
285 286 2.217750 CGATTCATTGGTAATCCGGCA 58.782 47.619 0.00 0.00 36.30 5.69
286 287 2.218603 ACGATTCATTGGTAATCCGGC 58.781 47.619 0.00 0.00 36.30 6.13
287 288 5.277634 GGTTTACGATTCATTGGTAATCCGG 60.278 44.000 0.00 0.00 36.30 5.14
288 289 5.744490 GGTTTACGATTCATTGGTAATCCG 58.256 41.667 0.00 0.00 36.30 4.18
296 297 6.484926 GACCTGGCGGTTTACGATTCATTG 62.485 50.000 0.00 0.00 45.73 2.82
297 298 4.479945 GACCTGGCGGTTTACGATTCATT 61.480 47.826 0.00 0.00 45.73 2.57
298 299 2.998643 GACCTGGCGGTTTACGATTCAT 60.999 50.000 0.00 0.00 45.73 2.57
299 300 1.673626 GACCTGGCGGTTTACGATTCA 60.674 52.381 0.00 0.00 45.73 2.57
300 301 1.004595 GACCTGGCGGTTTACGATTC 58.995 55.000 0.00 0.00 45.73 2.52
301 302 0.392060 GGACCTGGCGGTTTACGATT 60.392 55.000 0.00 0.00 45.73 3.34
302 303 1.219935 GGACCTGGCGGTTTACGAT 59.780 57.895 0.00 0.00 45.73 3.73
303 304 1.756408 TTGGACCTGGCGGTTTACGA 61.756 55.000 0.00 0.00 45.73 3.43
304 305 1.296056 CTTGGACCTGGCGGTTTACG 61.296 60.000 0.00 0.00 45.73 3.18
305 306 1.583495 GCTTGGACCTGGCGGTTTAC 61.583 60.000 0.00 0.00 45.73 2.01
306 307 1.302993 GCTTGGACCTGGCGGTTTA 60.303 57.895 0.00 0.00 45.73 2.01
307 308 2.597510 GCTTGGACCTGGCGGTTT 60.598 61.111 0.00 0.00 45.73 3.27
313 314 4.760047 CGACCCGCTTGGACCTGG 62.760 72.222 0.00 0.00 38.00 4.45
324 325 2.885644 CGATTCACTGGCGACCCG 60.886 66.667 0.00 0.00 0.00 5.28
325 326 3.195698 GCGATTCACTGGCGACCC 61.196 66.667 0.00 0.00 0.00 4.46
326 327 3.195698 GGCGATTCACTGGCGACC 61.196 66.667 0.00 0.00 0.00 4.79
327 328 1.573829 TTTGGCGATTCACTGGCGAC 61.574 55.000 0.00 0.00 0.00 5.19
328 329 1.302112 TTTGGCGATTCACTGGCGA 60.302 52.632 0.00 0.00 0.00 5.54
329 330 1.154225 GTTTGGCGATTCACTGGCG 60.154 57.895 0.00 0.00 0.00 5.69
330 331 0.169009 GAGTTTGGCGATTCACTGGC 59.831 55.000 0.00 0.00 0.00 4.85
331 332 0.804989 GGAGTTTGGCGATTCACTGG 59.195 55.000 0.00 0.00 0.00 4.00
332 333 1.466167 CTGGAGTTTGGCGATTCACTG 59.534 52.381 0.00 0.00 0.00 3.66
333 334 1.813513 CTGGAGTTTGGCGATTCACT 58.186 50.000 0.00 0.00 0.00 3.41
334 335 0.169009 GCTGGAGTTTGGCGATTCAC 59.831 55.000 0.00 0.00 0.00 3.18
335 336 0.960364 GGCTGGAGTTTGGCGATTCA 60.960 55.000 0.00 0.00 0.00 2.57
336 337 0.678048 AGGCTGGAGTTTGGCGATTC 60.678 55.000 0.00 0.00 0.00 2.52
337 338 0.251341 AAGGCTGGAGTTTGGCGATT 60.251 50.000 0.00 0.00 0.00 3.34
338 339 0.962356 CAAGGCTGGAGTTTGGCGAT 60.962 55.000 0.00 0.00 0.00 4.58
339 340 1.600636 CAAGGCTGGAGTTTGGCGA 60.601 57.895 0.00 0.00 0.00 5.54
340 341 1.856265 GACAAGGCTGGAGTTTGGCG 61.856 60.000 0.00 0.00 0.00 5.69
341 342 0.823356 TGACAAGGCTGGAGTTTGGC 60.823 55.000 0.00 0.00 0.00 4.52
342 343 1.915141 ATGACAAGGCTGGAGTTTGG 58.085 50.000 0.00 0.00 0.00 3.28
343 344 3.411446 TGTATGACAAGGCTGGAGTTTG 58.589 45.455 0.00 0.00 0.00 2.93
344 345 3.788227 TGTATGACAAGGCTGGAGTTT 57.212 42.857 0.00 0.00 0.00 2.66
345 346 3.370953 GGATGTATGACAAGGCTGGAGTT 60.371 47.826 0.00 0.00 0.00 3.01
346 347 2.171448 GGATGTATGACAAGGCTGGAGT 59.829 50.000 0.00 0.00 0.00 3.85
347 348 2.804572 CGGATGTATGACAAGGCTGGAG 60.805 54.545 0.00 0.00 0.00 3.86
348 349 1.138859 CGGATGTATGACAAGGCTGGA 59.861 52.381 0.00 0.00 0.00 3.86
349 350 1.586422 CGGATGTATGACAAGGCTGG 58.414 55.000 0.00 0.00 0.00 4.85
350 351 1.586422 CCGGATGTATGACAAGGCTG 58.414 55.000 0.00 0.00 0.00 4.85
351 352 0.179045 GCCGGATGTATGACAAGGCT 60.179 55.000 5.05 0.00 41.06 4.58
352 353 0.179045 AGCCGGATGTATGACAAGGC 60.179 55.000 5.05 13.03 43.02 4.35
353 354 1.134401 ACAGCCGGATGTATGACAAGG 60.134 52.381 26.67 0.00 0.00 3.61
354 355 2.315925 ACAGCCGGATGTATGACAAG 57.684 50.000 26.67 0.00 0.00 3.16
355 356 2.779755 AACAGCCGGATGTATGACAA 57.220 45.000 28.10 0.00 31.70 3.18
356 357 2.779755 AAACAGCCGGATGTATGACA 57.220 45.000 28.10 0.00 31.70 3.58
357 358 4.689345 GGTATAAACAGCCGGATGTATGAC 59.311 45.833 28.10 20.08 31.70 3.06
358 359 4.559906 CGGTATAAACAGCCGGATGTATGA 60.560 45.833 28.10 14.70 41.60 2.15
359 360 3.678072 CGGTATAAACAGCCGGATGTATG 59.322 47.826 28.10 7.63 41.60 2.39
360 361 3.863400 GCGGTATAAACAGCCGGATGTAT 60.863 47.826 28.10 19.27 45.02 2.29
361 362 2.546373 GCGGTATAAACAGCCGGATGTA 60.546 50.000 28.10 12.47 45.02 2.29
362 363 1.808891 GCGGTATAAACAGCCGGATGT 60.809 52.381 22.02 22.02 45.02 3.06
363 364 0.865769 GCGGTATAAACAGCCGGATG 59.134 55.000 20.26 20.26 45.02 3.51
364 365 0.599204 CGCGGTATAAACAGCCGGAT 60.599 55.000 5.05 0.00 43.03 4.18
365 366 1.227031 CGCGGTATAAACAGCCGGA 60.227 57.895 5.05 0.00 43.03 5.14
366 367 2.241880 CCGCGGTATAAACAGCCGG 61.242 63.158 19.50 0.00 43.03 6.13
367 368 2.241880 CCCGCGGTATAAACAGCCG 61.242 63.158 26.12 0.00 43.03 5.52
368 369 1.890510 CCCCGCGGTATAAACAGCC 60.891 63.158 26.12 0.00 43.03 4.85
369 370 0.104671 TACCCCGCGGTATAAACAGC 59.895 55.000 26.12 0.00 42.18 4.40
385 386 0.974383 CAGGGTGTCGGGGATATACC 59.026 60.000 0.00 0.00 38.08 2.73
386 387 0.974383 CCAGGGTGTCGGGGATATAC 59.026 60.000 0.00 0.00 0.00 1.47
387 388 0.564171 ACCAGGGTGTCGGGGATATA 59.436 55.000 0.00 0.00 34.87 0.86
388 389 0.327191 AACCAGGGTGTCGGGGATAT 60.327 55.000 0.00 0.00 34.87 1.63
389 390 0.548197 AAACCAGGGTGTCGGGGATA 60.548 55.000 0.00 0.00 34.87 2.59
390 391 1.432023 AAAACCAGGGTGTCGGGGAT 61.432 55.000 0.00 0.00 34.87 3.85
391 392 2.079911 AAAACCAGGGTGTCGGGGA 61.080 57.895 0.00 0.00 34.87 4.81
392 393 1.901464 CAAAACCAGGGTGTCGGGG 60.901 63.158 0.00 0.00 34.87 5.73
393 394 2.561037 GCAAAACCAGGGTGTCGGG 61.561 63.158 0.00 0.00 36.74 5.14
394 395 2.561037 GGCAAAACCAGGGTGTCGG 61.561 63.158 0.00 0.00 38.86 4.79
395 396 1.515521 GAGGCAAAACCAGGGTGTCG 61.516 60.000 0.00 0.00 43.14 4.35
396 397 1.515521 CGAGGCAAAACCAGGGTGTC 61.516 60.000 0.00 0.00 43.14 3.67
397 398 1.528309 CGAGGCAAAACCAGGGTGT 60.528 57.895 0.00 0.00 43.14 4.16
398 399 1.228124 TCGAGGCAAAACCAGGGTG 60.228 57.895 0.00 0.00 43.14 4.61
399 400 1.073199 CTCGAGGCAAAACCAGGGT 59.927 57.895 3.91 0.00 43.14 4.34
422 423 0.537371 AGTTTGGGGACTTTCTGCCG 60.537 55.000 0.00 0.00 0.00 5.69
492 495 1.516110 CTCATGGGTCCCCTCTCAAT 58.484 55.000 5.13 0.00 36.94 2.57
508 511 0.415830 TCCCACACATACTCCCCTCA 59.584 55.000 0.00 0.00 0.00 3.86
511 514 2.775384 TGTTATCCCACACATACTCCCC 59.225 50.000 0.00 0.00 0.00 4.81
604 608 9.558396 TTTTGGATAGAAAAAGCACAAATCATT 57.442 25.926 0.00 0.00 0.00 2.57
630 637 8.849490 CATCAAACACGACGAAATTCAATAAAT 58.151 29.630 0.00 0.00 0.00 1.40
634 641 5.996219 TCATCAAACACGACGAAATTCAAT 58.004 33.333 0.00 0.00 0.00 2.57
635 642 5.411083 TCATCAAACACGACGAAATTCAA 57.589 34.783 0.00 0.00 0.00 2.69
642 649 5.334260 GGGTAAATTTCATCAAACACGACGA 60.334 40.000 0.00 0.00 0.00 4.20
660 667 5.597594 ACCAAATTTCAACTAACCGGGTAAA 59.402 36.000 6.32 0.00 0.00 2.01
662 669 4.727677 ACCAAATTTCAACTAACCGGGTA 58.272 39.130 6.32 1.12 0.00 3.69
680 687 5.697473 TCTTCGCATACATTTTGAACCAA 57.303 34.783 0.00 0.00 0.00 3.67
696 703 0.737219 AGCCATTCAATGCTCTTCGC 59.263 50.000 0.00 0.00 39.77 4.70
697 866 1.065102 CCAGCCATTCAATGCTCTTCG 59.935 52.381 0.00 0.00 35.12 3.79
699 868 0.822164 GCCAGCCATTCAATGCTCTT 59.178 50.000 0.00 0.00 35.12 2.85
701 870 0.822164 AAGCCAGCCATTCAATGCTC 59.178 50.000 0.00 0.00 35.12 4.26
705 874 5.046448 TCAATGTAAAAGCCAGCCATTCAAT 60.046 36.000 0.00 0.00 0.00 2.57
713 882 3.731867 CGGACATCAATGTAAAAGCCAGC 60.732 47.826 0.00 0.00 41.95 4.85
715 884 2.752354 CCGGACATCAATGTAAAAGCCA 59.248 45.455 0.00 0.00 41.95 4.75
720 889 2.574369 AGTCCCCGGACATCAATGTAAA 59.426 45.455 16.08 0.00 46.76 2.01
722 891 1.484653 CAGTCCCCGGACATCAATGTA 59.515 52.381 16.08 0.00 46.76 2.29
724 893 0.541392 TCAGTCCCCGGACATCAATG 59.459 55.000 16.08 5.33 46.76 2.82
728 897 1.749033 GGATCAGTCCCCGGACATC 59.251 63.158 16.08 10.42 46.76 3.06
729 898 3.971894 GGATCAGTCCCCGGACAT 58.028 61.111 16.08 1.67 46.76 3.06
743 912 0.398522 TCAGTATGCGGACAGGGGAT 60.399 55.000 0.00 0.00 34.76 3.85
748 917 0.802222 CCACGTCAGTATGCGGACAG 60.802 60.000 13.76 8.97 39.29 3.51
753 922 1.076533 GGTCACCACGTCAGTATGCG 61.077 60.000 0.00 0.00 40.48 4.73
756 925 0.896940 ACCGGTCACCACGTCAGTAT 60.897 55.000 0.00 0.00 0.00 2.12
757 926 1.108727 AACCGGTCACCACGTCAGTA 61.109 55.000 8.04 0.00 0.00 2.74
758 927 1.963464 AAACCGGTCACCACGTCAGT 61.963 55.000 8.04 0.00 0.00 3.41
759 928 1.227438 AAACCGGTCACCACGTCAG 60.227 57.895 8.04 0.00 0.00 3.51
760 929 1.521906 CAAACCGGTCACCACGTCA 60.522 57.895 8.04 0.00 0.00 4.35
761 930 2.248835 CCAAACCGGTCACCACGTC 61.249 63.158 8.04 0.00 0.00 4.34
762 931 2.203098 CCAAACCGGTCACCACGT 60.203 61.111 8.04 0.00 0.00 4.49
763 932 1.959226 CTCCAAACCGGTCACCACG 60.959 63.158 8.04 0.00 35.57 4.94
828 1227 2.437413 ACCCTCGGAAAGAATTTGCTC 58.563 47.619 0.00 0.00 44.88 4.26
876 2057 1.558756 CCCTGGATCCAGCTCATATCC 59.441 57.143 32.97 10.36 42.35 2.59
970 2166 3.164977 TGGTGGCGAAGTGGTGGA 61.165 61.111 0.00 0.00 0.00 4.02
1080 2276 1.870055 GCACTACCTTCCGTCGACCA 61.870 60.000 10.58 0.00 0.00 4.02
1236 2432 2.042333 TCTAGGCGGCCAAGGCTA 60.042 61.111 23.09 12.38 45.66 3.93
1323 2519 2.439519 CGGGGAATTTGGGGACGG 60.440 66.667 0.00 0.00 0.00 4.79
1428 2624 2.416747 TCTGCAATACAGCACTCACAC 58.583 47.619 0.00 0.00 46.76 3.82
1431 2627 3.437741 CACATTCTGCAATACAGCACTCA 59.562 43.478 0.00 0.00 46.76 3.41
1703 2904 5.833082 ACATAAGCCAGTAATAGTCACTCG 58.167 41.667 0.00 0.00 0.00 4.18
1754 2955 4.083484 AGGCACGCTGTTAACATAAAGAAC 60.083 41.667 9.13 0.00 0.00 3.01
1760 2961 2.753055 TCAGGCACGCTGTTAACATA 57.247 45.000 9.13 0.00 0.00 2.29
1840 3041 8.958119 TTTGTATATAATCCTCTTGACCACAC 57.042 34.615 0.00 0.00 0.00 3.82
2388 3598 4.991056 GCTTCTTGAGTTGATAGTGTGACA 59.009 41.667 0.00 0.00 0.00 3.58
2573 3783 1.106285 GGTCAAATCCCACATGAGCC 58.894 55.000 0.00 0.00 35.99 4.70
2614 3824 2.310647 ACGAAGGGGGTCAATAAACCAT 59.689 45.455 0.00 0.00 41.40 3.55
2626 3836 0.958876 GGCACAAAGTACGAAGGGGG 60.959 60.000 0.00 0.00 0.00 5.40
2731 3941 2.698797 GGAACGGAGGGAGTATCATTGA 59.301 50.000 0.00 0.00 36.25 2.57
2738 3948 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2739 3949 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
2740 3950 3.477530 GAATATTTGGGAACGGAGGGAG 58.522 50.000 0.00 0.00 0.00 4.30
2741 3951 2.158871 CGAATATTTGGGAACGGAGGGA 60.159 50.000 0.00 0.00 0.00 4.20
2742 3952 2.218603 CGAATATTTGGGAACGGAGGG 58.781 52.381 0.00 0.00 0.00 4.30
2743 3953 2.870411 GACGAATATTTGGGAACGGAGG 59.130 50.000 7.61 0.00 0.00 4.30
2744 3954 3.793559 AGACGAATATTTGGGAACGGAG 58.206 45.455 7.61 0.00 0.00 4.63
2745 3955 3.899052 AGACGAATATTTGGGAACGGA 57.101 42.857 7.61 0.00 0.00 4.69
2746 3956 4.634443 AGAAAGACGAATATTTGGGAACGG 59.366 41.667 7.61 0.00 0.00 4.44
2747 3957 5.447279 CCAGAAAGACGAATATTTGGGAACG 60.447 44.000 7.61 0.00 0.00 3.95
2748 3958 5.646360 TCCAGAAAGACGAATATTTGGGAAC 59.354 40.000 7.61 0.00 0.00 3.62
2749 3959 5.646360 GTCCAGAAAGACGAATATTTGGGAA 59.354 40.000 7.61 0.00 0.00 3.97
2750 3960 5.183228 GTCCAGAAAGACGAATATTTGGGA 58.817 41.667 7.61 0.00 0.00 4.37
2751 3961 4.941263 TGTCCAGAAAGACGAATATTTGGG 59.059 41.667 7.61 0.00 39.77 4.12
2752 3962 6.683974 ATGTCCAGAAAGACGAATATTTGG 57.316 37.500 7.61 0.35 39.77 3.28
2753 3963 8.236586 TGAAATGTCCAGAAAGACGAATATTTG 58.763 33.333 0.78 0.78 39.77 2.32
2754 3964 8.335532 TGAAATGTCCAGAAAGACGAATATTT 57.664 30.769 0.00 0.00 39.77 1.40
2755 3965 7.921786 TGAAATGTCCAGAAAGACGAATATT 57.078 32.000 0.00 0.00 39.77 1.28
2756 3966 7.921786 TTGAAATGTCCAGAAAGACGAATAT 57.078 32.000 0.00 0.00 39.77 1.28
2757 3967 7.737972 TTTGAAATGTCCAGAAAGACGAATA 57.262 32.000 0.00 0.00 39.77 1.75
2758 3968 6.633500 TTTGAAATGTCCAGAAAGACGAAT 57.367 33.333 0.00 0.00 39.77 3.34
2759 3969 6.437928 CATTTGAAATGTCCAGAAAGACGAA 58.562 36.000 9.67 0.00 39.77 3.85
2760 3970 5.048782 CCATTTGAAATGTCCAGAAAGACGA 60.049 40.000 15.93 0.00 39.77 4.20
2761 3971 5.156355 CCATTTGAAATGTCCAGAAAGACG 58.844 41.667 15.93 0.00 39.77 4.18
2762 3972 6.089249 ACCATTTGAAATGTCCAGAAAGAC 57.911 37.500 15.93 0.00 37.28 3.01
2763 3973 6.729690 AACCATTTGAAATGTCCAGAAAGA 57.270 33.333 15.93 0.00 0.00 2.52
2764 3974 7.885297 TCTAACCATTTGAAATGTCCAGAAAG 58.115 34.615 15.93 1.80 0.00 2.62
2765 3975 7.831691 TCTAACCATTTGAAATGTCCAGAAA 57.168 32.000 15.93 0.00 0.00 2.52
2766 3976 7.286546 TGTTCTAACCATTTGAAATGTCCAGAA 59.713 33.333 15.93 15.59 0.00 3.02
2767 3977 6.775142 TGTTCTAACCATTTGAAATGTCCAGA 59.225 34.615 15.93 11.38 0.00 3.86
2768 3978 6.980593 TGTTCTAACCATTTGAAATGTCCAG 58.019 36.000 15.93 9.53 0.00 3.86
2769 3979 6.968263 TGTTCTAACCATTTGAAATGTCCA 57.032 33.333 15.93 0.76 0.00 4.02
2770 3980 9.520204 CATATGTTCTAACCATTTGAAATGTCC 57.480 33.333 15.93 0.00 0.00 4.02
2771 3981 9.520204 CCATATGTTCTAACCATTTGAAATGTC 57.480 33.333 15.93 0.30 0.00 3.06
2772 3982 9.253832 TCCATATGTTCTAACCATTTGAAATGT 57.746 29.630 15.93 2.12 0.00 2.71
2775 3985 9.253832 ACATCCATATGTTCTAACCATTTGAAA 57.746 29.630 1.24 0.00 44.07 2.69
2776 3986 8.821686 ACATCCATATGTTCTAACCATTTGAA 57.178 30.769 1.24 0.00 44.07 2.69
2779 3989 9.866655 ACATACATCCATATGTTCTAACCATTT 57.133 29.630 1.24 0.00 44.07 2.32
2782 3992 9.374711 TCTACATACATCCATATGTTCTAACCA 57.625 33.333 1.24 0.00 44.07 3.67
2783 3993 9.640963 GTCTACATACATCCATATGTTCTAACC 57.359 37.037 1.24 0.00 44.07 2.85
2820 4030 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
2821 4031 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
2822 4032 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
2823 4033 7.465916 GCATACGAAGCAAAATGAGTGAATCTA 60.466 37.037 0.00 0.00 0.00 1.98
2824 4034 6.676456 GCATACGAAGCAAAATGAGTGAATCT 60.676 38.462 0.00 0.00 0.00 2.40
2825 4035 5.453587 GCATACGAAGCAAAATGAGTGAATC 59.546 40.000 0.00 0.00 0.00 2.52
2826 4036 5.106197 TGCATACGAAGCAAAATGAGTGAAT 60.106 36.000 0.00 0.00 39.39 2.57
2827 4037 4.215185 TGCATACGAAGCAAAATGAGTGAA 59.785 37.500 0.00 0.00 39.39 3.18
2828 4038 3.750652 TGCATACGAAGCAAAATGAGTGA 59.249 39.130 0.00 0.00 39.39 3.41
2829 4039 4.082274 TGCATACGAAGCAAAATGAGTG 57.918 40.909 0.00 0.00 39.39 3.51
2830 4040 3.753272 ACTGCATACGAAGCAAAATGAGT 59.247 39.130 0.00 0.00 42.17 3.41
2831 4041 4.142838 TGACTGCATACGAAGCAAAATGAG 60.143 41.667 0.00 0.00 42.17 2.90
2832 4042 3.750652 TGACTGCATACGAAGCAAAATGA 59.249 39.130 0.00 0.00 42.17 2.57
2833 4043 4.082274 TGACTGCATACGAAGCAAAATG 57.918 40.909 0.00 0.00 42.17 2.32
2834 4044 4.970662 ATGACTGCATACGAAGCAAAAT 57.029 36.364 0.00 0.00 42.17 1.82
2835 4045 4.764679 AATGACTGCATACGAAGCAAAA 57.235 36.364 0.00 0.00 42.17 2.44
2836 4046 4.023279 ACAAATGACTGCATACGAAGCAAA 60.023 37.500 0.00 0.00 42.17 3.68
2837 4047 3.501828 ACAAATGACTGCATACGAAGCAA 59.498 39.130 0.00 0.00 42.17 3.91
2838 4048 3.073678 ACAAATGACTGCATACGAAGCA 58.926 40.909 0.00 0.00 40.19 3.91
2839 4049 3.747099 ACAAATGACTGCATACGAAGC 57.253 42.857 0.00 0.00 33.44 3.86
2840 4050 5.281693 TCAACAAATGACTGCATACGAAG 57.718 39.130 0.00 0.00 33.44 3.79
2841 4051 5.681337 TTCAACAAATGACTGCATACGAA 57.319 34.783 0.00 0.00 37.92 3.85
2842 4052 5.681337 TTTCAACAAATGACTGCATACGA 57.319 34.783 0.00 0.00 37.92 3.43
2843 4053 6.317088 AGATTTCAACAAATGACTGCATACG 58.683 36.000 0.00 0.00 37.92 3.06
2844 4054 7.533426 AGAGATTTCAACAAATGACTGCATAC 58.467 34.615 0.00 0.00 37.92 2.39
2845 4055 7.692460 AGAGATTTCAACAAATGACTGCATA 57.308 32.000 0.00 0.00 37.92 3.14
2846 4056 6.585695 AGAGATTTCAACAAATGACTGCAT 57.414 33.333 0.00 0.00 37.92 3.96
2847 4057 6.936335 TCTAGAGATTTCAACAAATGACTGCA 59.064 34.615 0.00 0.00 37.92 4.41
2848 4058 7.369803 TCTAGAGATTTCAACAAATGACTGC 57.630 36.000 0.00 0.00 37.92 4.40
2849 4059 9.823098 CTTTCTAGAGATTTCAACAAATGACTG 57.177 33.333 0.00 0.00 37.92 3.51
2850 4060 9.784531 TCTTTCTAGAGATTTCAACAAATGACT 57.215 29.630 0.00 0.00 37.92 3.41
2851 4061 9.818796 GTCTTTCTAGAGATTTCAACAAATGAC 57.181 33.333 0.00 0.00 37.92 3.06
2852 4062 9.559732 TGTCTTTCTAGAGATTTCAACAAATGA 57.440 29.630 0.00 0.00 31.94 2.57
2865 4075 9.449719 GTTCCCAAATATTTGTCTTTCTAGAGA 57.550 33.333 23.24 5.94 36.45 3.10
2866 4076 8.391106 CGTTCCCAAATATTTGTCTTTCTAGAG 58.609 37.037 23.24 7.00 36.45 2.43
2867 4077 7.335924 CCGTTCCCAAATATTTGTCTTTCTAGA 59.664 37.037 23.24 7.17 36.45 2.43
2868 4078 7.335924 TCCGTTCCCAAATATTTGTCTTTCTAG 59.664 37.037 23.24 8.23 36.45 2.43
2869 4079 7.169591 TCCGTTCCCAAATATTTGTCTTTCTA 58.830 34.615 23.24 5.03 36.45 2.10
2870 4080 6.007703 TCCGTTCCCAAATATTTGTCTTTCT 58.992 36.000 23.24 0.00 36.45 2.52
2871 4081 6.262193 TCCGTTCCCAAATATTTGTCTTTC 57.738 37.500 23.24 10.84 36.45 2.62
2872 4082 5.185056 CCTCCGTTCCCAAATATTTGTCTTT 59.815 40.000 23.24 0.00 36.45 2.52
2873 4083 4.705023 CCTCCGTTCCCAAATATTTGTCTT 59.295 41.667 23.24 0.00 36.45 3.01
2874 4084 4.270008 CCTCCGTTCCCAAATATTTGTCT 58.730 43.478 23.24 0.00 36.45 3.41
2875 4085 3.380320 CCCTCCGTTCCCAAATATTTGTC 59.620 47.826 23.24 11.68 36.45 3.18
2876 4086 3.010808 TCCCTCCGTTCCCAAATATTTGT 59.989 43.478 23.24 0.00 36.45 2.83
2877 4087 3.626930 TCCCTCCGTTCCCAAATATTTG 58.373 45.455 19.40 19.40 37.90 2.32
2878 4088 3.268595 ACTCCCTCCGTTCCCAAATATTT 59.731 43.478 0.00 0.00 0.00 1.40
2879 4089 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
2880 4090 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
2881 4091 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2882 4092 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
2883 4093 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
2884 4094 2.767960 GTTATACTCCCTCCGTTCCCAA 59.232 50.000 0.00 0.00 0.00 4.12
2885 4095 2.023695 AGTTATACTCCCTCCGTTCCCA 60.024 50.000 0.00 0.00 0.00 4.37
2886 4096 2.675583 AGTTATACTCCCTCCGTTCCC 58.324 52.381 0.00 0.00 0.00 3.97
2887 4097 4.750021 AAAGTTATACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 0.00 3.62
2888 4098 6.404708 AGAAAAAGTTATACTCCCTCCGTTC 58.595 40.000 0.00 0.00 0.00 3.95
2889 4099 6.370186 AGAAAAAGTTATACTCCCTCCGTT 57.630 37.500 0.00 0.00 0.00 4.44
2890 4100 6.438425 TGTAGAAAAAGTTATACTCCCTCCGT 59.562 38.462 0.00 0.00 33.44 4.69
2891 4101 6.870769 TGTAGAAAAAGTTATACTCCCTCCG 58.129 40.000 0.00 0.00 33.44 4.63
2892 4102 8.265764 ACATGTAGAAAAAGTTATACTCCCTCC 58.734 37.037 0.00 0.00 33.44 4.30
3006 4217 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
3034 4245 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
3146 4357 8.317679 CCCTTTGTATTTTGGGTCATATTTTGA 58.682 33.333 0.00 0.00 35.13 2.69
3190 4401 6.316890 CACTTTACAGAGAGACTACTACCTCC 59.683 46.154 0.00 0.00 0.00 4.30
3252 4463 2.290896 TGAGGGGGCATAACTGAAGTTG 60.291 50.000 5.95 0.00 38.90 3.16
3513 4724 2.938451 TGCTCCATGTTCAGAAATAGCG 59.062 45.455 0.00 0.00 0.00 4.26
3753 4964 7.382218 AGAAAACAAAAAGCTTGGTCATATTCG 59.618 33.333 0.00 0.00 0.00 3.34
4018 5229 1.278985 TCATGCCGTGGAAGAATCTGT 59.721 47.619 0.00 0.00 0.00 3.41
4107 5318 4.654091 ACAACAAAACTGTGGATCAAGG 57.346 40.909 0.00 0.00 0.00 3.61
4264 5475 5.505181 AGAAGAATACTGCTCCTTCCAAA 57.495 39.130 0.00 0.00 36.57 3.28
4284 5495 7.972832 AACGTTCATACAGTAAAATGGAAGA 57.027 32.000 0.00 0.00 0.00 2.87
4297 5508 3.579586 AGTTGGGAGGTAACGTTCATACA 59.420 43.478 2.82 0.00 46.39 2.29
4405 5617 6.260870 AGATATGCATCTACTTGGACTACG 57.739 41.667 0.19 0.00 39.85 3.51
4464 5676 6.588719 AAAAGAGTTTGCATAGCATGGTTA 57.411 33.333 1.12 0.00 38.76 2.85
4689 5913 7.974482 TGCAAGATATGGATGTAGAATCAAG 57.026 36.000 0.00 0.00 0.00 3.02
4706 5930 7.552687 TGTACGAGGAAAATTAAGATGCAAGAT 59.447 33.333 0.00 0.00 0.00 2.40
4728 5952 5.073311 TGCAGTTTCTGGACTAGATGTAC 57.927 43.478 0.00 0.00 34.80 2.90
4739 5968 2.260844 TGGTCTTCTGCAGTTTCTGG 57.739 50.000 14.67 0.00 31.21 3.86
4773 6002 9.067986 CACTCTTTAAACCTTTGAGGATAGTTT 57.932 33.333 0.07 0.00 37.67 2.66
4779 6008 5.048846 AGCACTCTTTAAACCTTTGAGGA 57.951 39.130 0.07 0.00 37.67 3.71
4812 6042 5.860182 CGTTCAACGATCTTAGGTTCTTACA 59.140 40.000 3.01 0.00 46.05 2.41
4828 6058 0.771756 TTAGTTCGACGCGTTCAACG 59.228 50.000 15.53 13.05 45.88 4.10
4878 6108 2.231478 TCTTACTGTGCTAGGAGTGTGC 59.769 50.000 0.00 0.00 0.00 4.57
4896 6126 6.828785 AGTGTGTTCAACAATCTTAGGTTCTT 59.171 34.615 0.00 0.00 41.57 2.52
4914 6144 1.073763 TGCCTTCAGCCATAGTGTGTT 59.926 47.619 0.00 0.00 42.71 3.32
4943 6174 7.519002 AGTATTAGTTTGACAACATTTCTCGC 58.481 34.615 0.00 0.00 35.05 5.03
4963 6194 6.932400 TCCAGACAATACGACAACAAAGTATT 59.068 34.615 0.00 0.00 40.46 1.89
4980 6211 1.071699 CCCGGTCTTCTTTCCAGACAA 59.928 52.381 0.00 0.00 42.28 3.18
4985 6216 1.125093 TGCTCCCGGTCTTCTTTCCA 61.125 55.000 0.00 0.00 0.00 3.53
4988 6219 0.472471 TTGTGCTCCCGGTCTTCTTT 59.528 50.000 0.00 0.00 0.00 2.52
5000 6231 7.386299 TCACTAGAGATTCTTTCTTTTGTGCTC 59.614 37.037 0.00 0.00 40.05 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.