Multiple sequence alignment - TraesCS3D01G262100
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS3D01G262100
chr3D
100.000
1610
0
0
859
2468
363854795
363853186
0.000000e+00
2974.0
1
TraesCS3D01G262100
chr3D
96.366
853
26
3
859
1706
486147131
486146279
0.000000e+00
1399.0
2
TraesCS3D01G262100
chr3D
95.455
858
24
6
859
1705
124070450
124071303
0.000000e+00
1354.0
3
TraesCS3D01G262100
chr3D
94.368
657
33
4
1815
2468
300539166
300539821
0.000000e+00
1005.0
4
TraesCS3D01G262100
chr3D
100.000
500
0
0
1
500
363855653
363855154
0.000000e+00
924.0
5
TraesCS3D01G262100
chr3D
94.009
217
13
0
284
500
486147833
486147617
1.830000e-86
329.0
6
TraesCS3D01G262100
chr3D
93.243
222
12
2
279
500
124069443
124069661
8.510000e-85
324.0
7
TraesCS3D01G262100
chr3D
100.000
37
0
0
4
40
363605521
363605557
4.400000e-08
69.4
8
TraesCS3D01G262100
chr3D
100.000
33
0
0
12
44
363605556
363605588
7.370000e-06
62.1
9
TraesCS3D01G262100
chr7A
96.462
848
29
1
859
1705
700256774
700257621
0.000000e+00
1399.0
10
TraesCS3D01G262100
chr5B
96.362
852
26
3
859
1706
56361607
56362457
0.000000e+00
1397.0
11
TraesCS3D01G262100
chr5B
95.327
856
31
4
859
1706
517572239
517571385
0.000000e+00
1351.0
12
TraesCS3D01G262100
chr5B
95.283
848
36
2
859
1705
297042294
297043138
0.000000e+00
1341.0
13
TraesCS3D01G262100
chr5D
95.863
846
31
2
859
1703
397098309
397099151
0.000000e+00
1365.0
14
TraesCS3D01G262100
chr5D
95.642
849
26
4
859
1703
432179325
432178484
0.000000e+00
1352.0
15
TraesCS3D01G262100
chr5D
93.395
651
37
5
1822
2468
370774511
370775159
0.000000e+00
959.0
16
TraesCS3D01G262100
chr5D
93.088
217
15
0
284
500
53755584
53755800
3.960000e-83
318.0
17
TraesCS3D01G262100
chr3A
95.637
848
30
2
859
1705
418753968
418753127
0.000000e+00
1354.0
18
TraesCS3D01G262100
chr3A
93.374
649
37
5
1824
2468
176139200
176138554
0.000000e+00
955.0
19
TraesCS3D01G262100
chr3A
93.651
63
3
1
1
63
484653484
484653545
2.610000e-15
93.5
20
TraesCS3D01G262100
chr6D
94.444
648
31
3
1824
2468
383214586
383215231
0.000000e+00
992.0
21
TraesCS3D01G262100
chr6D
93.395
651
38
4
1820
2468
23101456
23100809
0.000000e+00
959.0
22
TraesCS3D01G262100
chr6D
93.088
217
15
0
284
500
58735218
58735002
3.960000e-83
318.0
23
TraesCS3D01G262100
chr6D
92.694
219
15
1
283
500
417530033
417529815
5.120000e-82
315.0
24
TraesCS3D01G262100
chr2D
94.299
649
30
6
1824
2468
118538838
118538193
0.000000e+00
987.0
25
TraesCS3D01G262100
chr2D
93.663
647
37
3
1824
2468
381888803
381888159
0.000000e+00
965.0
26
TraesCS3D01G262100
chr2D
93.385
650
37
4
1820
2468
53969561
53968917
0.000000e+00
957.0
27
TraesCS3D01G262100
chr2D
94.495
218
12
0
283
500
451007623
451007840
1.090000e-88
337.0
28
TraesCS3D01G262100
chr1D
93.538
650
37
5
1822
2468
348998491
348997844
0.000000e+00
963.0
29
TraesCS3D01G262100
chr4A
93.519
216
13
1
286
500
512021760
512021545
1.100000e-83
320.0
30
TraesCS3D01G262100
chr3B
93.119
218
15
0
283
500
207205133
207204916
1.100000e-83
320.0
31
TraesCS3D01G262100
chr3B
87.705
122
8
1
1703
1824
473708441
473708555
4.280000e-28
135.0
32
TraesCS3D01G262100
chr3B
83.621
116
7
6
183
287
473708330
473708444
5.620000e-17
99.0
33
TraesCS3D01G262100
chr3B
94.915
59
3
0
3
61
473708123
473708181
2.610000e-15
93.5
34
TraesCS3D01G262100
chrUn
92.342
222
16
1
279
500
441250326
441250546
5.120000e-82
315.0
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS3D01G262100
chr3D
363853186
363855653
2467
True
1949
2974
100.0000
1
2468
2
chr3D.!!$R1
2467
1
TraesCS3D01G262100
chr3D
300539166
300539821
655
False
1005
1005
94.3680
1815
2468
1
chr3D.!!$F1
653
2
TraesCS3D01G262100
chr3D
486146279
486147833
1554
True
864
1399
95.1875
284
1706
2
chr3D.!!$R2
1422
3
TraesCS3D01G262100
chr3D
124069443
124071303
1860
False
839
1354
94.3490
279
1705
2
chr3D.!!$F2
1426
4
TraesCS3D01G262100
chr7A
700256774
700257621
847
False
1399
1399
96.4620
859
1705
1
chr7A.!!$F1
846
5
TraesCS3D01G262100
chr5B
56361607
56362457
850
False
1397
1397
96.3620
859
1706
1
chr5B.!!$F1
847
6
TraesCS3D01G262100
chr5B
517571385
517572239
854
True
1351
1351
95.3270
859
1706
1
chr5B.!!$R1
847
7
TraesCS3D01G262100
chr5B
297042294
297043138
844
False
1341
1341
95.2830
859
1705
1
chr5B.!!$F2
846
8
TraesCS3D01G262100
chr5D
397098309
397099151
842
False
1365
1365
95.8630
859
1703
1
chr5D.!!$F3
844
9
TraesCS3D01G262100
chr5D
432178484
432179325
841
True
1352
1352
95.6420
859
1703
1
chr5D.!!$R1
844
10
TraesCS3D01G262100
chr5D
370774511
370775159
648
False
959
959
93.3950
1822
2468
1
chr5D.!!$F2
646
11
TraesCS3D01G262100
chr3A
418753127
418753968
841
True
1354
1354
95.6370
859
1705
1
chr3A.!!$R2
846
12
TraesCS3D01G262100
chr3A
176138554
176139200
646
True
955
955
93.3740
1824
2468
1
chr3A.!!$R1
644
13
TraesCS3D01G262100
chr6D
383214586
383215231
645
False
992
992
94.4440
1824
2468
1
chr6D.!!$F1
644
14
TraesCS3D01G262100
chr6D
23100809
23101456
647
True
959
959
93.3950
1820
2468
1
chr6D.!!$R1
648
15
TraesCS3D01G262100
chr2D
118538193
118538838
645
True
987
987
94.2990
1824
2468
1
chr2D.!!$R2
644
16
TraesCS3D01G262100
chr2D
381888159
381888803
644
True
965
965
93.6630
1824
2468
1
chr2D.!!$R3
644
17
TraesCS3D01G262100
chr2D
53968917
53969561
644
True
957
957
93.3850
1820
2468
1
chr2D.!!$R1
648
18
TraesCS3D01G262100
chr1D
348997844
348998491
647
True
963
963
93.5380
1822
2468
1
chr1D.!!$R1
646
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
281
282
0.042881
AGGAGAACTGGTACCCCTCC
59.957
60.0
22.24
22.24
42.73
4.3
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1772
2243
0.45837
CGCGTGGATGTGATGACTGA
60.458
55.0
0.0
0.0
0.0
3.41
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
21
22
4.681978
GGGTTCTGCGCGACTGGT
62.682
66.667
12.10
0.00
0.00
4.00
22
23
3.414700
GGTTCTGCGCGACTGGTG
61.415
66.667
12.10
0.00
0.00
4.17
23
24
2.661866
GTTCTGCGCGACTGGTGT
60.662
61.111
12.10
0.00
0.00
4.16
24
25
2.661537
TTCTGCGCGACTGGTGTG
60.662
61.111
12.10
0.00
0.00
3.82
25
26
4.662961
TCTGCGCGACTGGTGTGG
62.663
66.667
12.10
0.00
0.00
4.17
26
27
4.969196
CTGCGCGACTGGTGTGGT
62.969
66.667
12.10
0.00
0.00
4.16
27
28
4.539083
TGCGCGACTGGTGTGGTT
62.539
61.111
12.10
0.00
0.00
3.67
28
29
4.012895
GCGCGACTGGTGTGGTTG
62.013
66.667
12.10
0.00
0.00
3.77
29
30
3.345808
CGCGACTGGTGTGGTTGG
61.346
66.667
0.00
0.00
0.00
3.77
30
31
2.203153
GCGACTGGTGTGGTTGGT
60.203
61.111
0.00
0.00
0.00
3.67
31
32
2.542907
GCGACTGGTGTGGTTGGTG
61.543
63.158
0.00
0.00
0.00
4.17
32
33
2.542907
CGACTGGTGTGGTTGGTGC
61.543
63.158
0.00
0.00
0.00
5.01
33
34
2.515991
ACTGGTGTGGTTGGTGCG
60.516
61.111
0.00
0.00
0.00
5.34
34
35
2.515991
CTGGTGTGGTTGGTGCGT
60.516
61.111
0.00
0.00
0.00
5.24
35
36
2.044848
TGGTGTGGTTGGTGCGTT
60.045
55.556
0.00
0.00
0.00
4.84
36
37
2.335052
CTGGTGTGGTTGGTGCGTTG
62.335
60.000
0.00
0.00
0.00
4.10
37
38
2.115911
GGTGTGGTTGGTGCGTTGA
61.116
57.895
0.00
0.00
0.00
3.18
38
39
1.355210
GTGTGGTTGGTGCGTTGAG
59.645
57.895
0.00
0.00
0.00
3.02
51
52
2.787723
CGTTGAGCATAACTTCGTGG
57.212
50.000
0.00
0.00
0.00
4.94
52
53
1.393539
CGTTGAGCATAACTTCGTGGG
59.606
52.381
0.00
0.00
0.00
4.61
53
54
1.737793
GTTGAGCATAACTTCGTGGGG
59.262
52.381
0.00
0.00
0.00
4.96
54
55
0.981183
TGAGCATAACTTCGTGGGGT
59.019
50.000
0.00
0.00
0.00
4.95
55
56
1.349688
TGAGCATAACTTCGTGGGGTT
59.650
47.619
0.00
0.00
0.00
4.11
56
57
2.007608
GAGCATAACTTCGTGGGGTTC
58.992
52.381
0.00
0.00
0.00
3.62
57
58
0.725117
GCATAACTTCGTGGGGTTCG
59.275
55.000
0.00
0.00
0.00
3.95
58
59
1.365699
CATAACTTCGTGGGGTTCGG
58.634
55.000
0.00
0.00
0.00
4.30
59
60
0.251073
ATAACTTCGTGGGGTTCGGG
59.749
55.000
0.00
0.00
0.00
5.14
60
61
1.120795
TAACTTCGTGGGGTTCGGGT
61.121
55.000
0.00
0.00
0.00
5.28
61
62
2.358247
CTTCGTGGGGTTCGGGTG
60.358
66.667
0.00
0.00
0.00
4.61
62
63
2.843411
TTCGTGGGGTTCGGGTGA
60.843
61.111
0.00
0.00
0.00
4.02
63
64
2.180159
CTTCGTGGGGTTCGGGTGAT
62.180
60.000
0.00
0.00
0.00
3.06
64
65
1.770749
TTCGTGGGGTTCGGGTGATT
61.771
55.000
0.00
0.00
0.00
2.57
65
66
2.038269
CGTGGGGTTCGGGTGATTG
61.038
63.158
0.00
0.00
0.00
2.67
66
67
1.677633
GTGGGGTTCGGGTGATTGG
60.678
63.158
0.00
0.00
0.00
3.16
67
68
2.157452
TGGGGTTCGGGTGATTGGT
61.157
57.895
0.00
0.00
0.00
3.67
68
69
1.076014
GGGGTTCGGGTGATTGGTT
59.924
57.895
0.00
0.00
0.00
3.67
69
70
1.248101
GGGGTTCGGGTGATTGGTTG
61.248
60.000
0.00
0.00
0.00
3.77
70
71
1.248101
GGGTTCGGGTGATTGGTTGG
61.248
60.000
0.00
0.00
0.00
3.77
71
72
1.584495
GTTCGGGTGATTGGTTGGC
59.416
57.895
0.00
0.00
0.00
4.52
72
73
1.969064
TTCGGGTGATTGGTTGGCG
60.969
57.895
0.00
0.00
0.00
5.69
73
74
3.439540
CGGGTGATTGGTTGGCGG
61.440
66.667
0.00
0.00
0.00
6.13
74
75
2.282887
GGGTGATTGGTTGGCGGT
60.283
61.111
0.00
0.00
0.00
5.68
75
76
1.906333
GGGTGATTGGTTGGCGGTT
60.906
57.895
0.00
0.00
0.00
4.44
76
77
1.288752
GGTGATTGGTTGGCGGTTG
59.711
57.895
0.00
0.00
0.00
3.77
77
78
1.288752
GTGATTGGTTGGCGGTTGG
59.711
57.895
0.00
0.00
0.00
3.77
78
79
1.905843
TGATTGGTTGGCGGTTGGG
60.906
57.895
0.00
0.00
0.00
4.12
79
80
1.906333
GATTGGTTGGCGGTTGGGT
60.906
57.895
0.00
0.00
0.00
4.51
80
81
0.609681
GATTGGTTGGCGGTTGGGTA
60.610
55.000
0.00
0.00
0.00
3.69
81
82
0.610785
ATTGGTTGGCGGTTGGGTAG
60.611
55.000
0.00
0.00
0.00
3.18
82
83
2.360726
GGTTGGCGGTTGGGTAGG
60.361
66.667
0.00
0.00
0.00
3.18
83
84
3.060000
GTTGGCGGTTGGGTAGGC
61.060
66.667
0.00
0.00
0.00
3.93
84
85
3.571216
TTGGCGGTTGGGTAGGCA
61.571
61.111
0.00
0.00
38.69
4.75
85
86
3.561120
TTGGCGGTTGGGTAGGCAG
62.561
63.158
0.00
0.00
41.38
4.85
87
88
4.410400
GCGGTTGGGTAGGCAGCT
62.410
66.667
0.00
0.00
0.00
4.24
88
89
3.026431
GCGGTTGGGTAGGCAGCTA
62.026
63.158
0.00
0.00
0.00
3.32
89
90
1.153429
CGGTTGGGTAGGCAGCTAC
60.153
63.158
0.00
0.00
0.00
3.58
90
91
1.223763
GGTTGGGTAGGCAGCTACC
59.776
63.158
9.96
9.96
46.44
3.18
94
95
4.957164
GGTAGGCAGCTACCCAAC
57.043
61.111
0.00
0.00
42.58
3.77
95
96
1.223763
GGTAGGCAGCTACCCAACC
59.776
63.158
8.92
8.92
42.58
3.77
96
97
1.272554
GGTAGGCAGCTACCCAACCT
61.273
60.000
15.17
5.61
42.58
3.50
97
98
0.178301
GTAGGCAGCTACCCAACCTC
59.822
60.000
0.00
0.00
31.79
3.85
98
99
0.981277
TAGGCAGCTACCCAACCTCC
60.981
60.000
0.00
0.00
31.79
4.30
99
100
2.125106
GCAGCTACCCAACCTCCG
60.125
66.667
0.00
0.00
0.00
4.63
100
101
2.584608
CAGCTACCCAACCTCCGG
59.415
66.667
0.00
0.00
0.00
5.14
107
108
2.911143
CCAACCTCCGGGGATCAG
59.089
66.667
0.37
0.00
38.76
2.90
108
109
1.995626
CCAACCTCCGGGGATCAGT
60.996
63.158
0.37
0.00
38.76
3.41
109
110
1.562672
CCAACCTCCGGGGATCAGTT
61.563
60.000
0.37
0.00
38.76
3.16
110
111
0.392998
CAACCTCCGGGGATCAGTTG
60.393
60.000
0.37
4.57
38.76
3.16
111
112
2.190578
CCTCCGGGGATCAGTTGC
59.809
66.667
0.37
0.00
37.23
4.17
112
113
2.669133
CCTCCGGGGATCAGTTGCA
61.669
63.158
0.37
0.00
37.23
4.08
113
114
1.299648
CTCCGGGGATCAGTTGCAA
59.700
57.895
0.00
0.00
0.00
4.08
114
115
0.745845
CTCCGGGGATCAGTTGCAAG
60.746
60.000
0.00
0.00
0.00
4.01
115
116
1.002134
CCGGGGATCAGTTGCAAGT
60.002
57.895
0.00
0.00
0.00
3.16
116
117
0.251916
CCGGGGATCAGTTGCAAGTA
59.748
55.000
6.43
0.00
0.00
2.24
117
118
1.369625
CGGGGATCAGTTGCAAGTAC
58.630
55.000
6.43
1.91
0.00
2.73
118
119
1.338674
CGGGGATCAGTTGCAAGTACA
60.339
52.381
6.43
0.00
0.00
2.90
119
120
2.359900
GGGGATCAGTTGCAAGTACAG
58.640
52.381
6.43
0.00
0.00
2.74
120
121
1.740025
GGGATCAGTTGCAAGTACAGC
59.260
52.381
6.43
0.00
0.00
4.40
121
122
2.426522
GGATCAGTTGCAAGTACAGCA
58.573
47.619
6.43
8.71
40.85
4.41
122
123
2.417933
GGATCAGTTGCAAGTACAGCAG
59.582
50.000
6.43
3.25
43.75
4.24
123
124
2.620251
TCAGTTGCAAGTACAGCAGT
57.380
45.000
6.43
3.15
43.75
4.40
124
125
2.483876
TCAGTTGCAAGTACAGCAGTC
58.516
47.619
6.43
9.94
43.75
3.51
125
126
2.158971
TCAGTTGCAAGTACAGCAGTCA
60.159
45.455
6.43
0.00
43.75
3.41
126
127
2.222678
CAGTTGCAAGTACAGCAGTCAG
59.777
50.000
6.43
5.00
43.75
3.51
127
128
1.069636
GTTGCAAGTACAGCAGTCAGC
60.070
52.381
0.00
0.00
43.75
4.26
136
137
3.745803
GCAGTCAGCAGGCAAGGC
61.746
66.667
0.00
0.00
44.79
4.35
137
138
3.429141
CAGTCAGCAGGCAAGGCG
61.429
66.667
0.00
0.00
36.08
5.52
145
146
4.711949
AGGCAAGGCGCTGGACAG
62.712
66.667
7.64
0.00
41.91
3.51
146
147
4.704833
GGCAAGGCGCTGGACAGA
62.705
66.667
7.64
0.00
41.91
3.41
147
148
2.669569
GCAAGGCGCTGGACAGAA
60.670
61.111
7.64
0.00
37.77
3.02
148
149
2.260869
GCAAGGCGCTGGACAGAAA
61.261
57.895
7.64
0.00
37.77
2.52
149
150
1.871772
CAAGGCGCTGGACAGAAAG
59.128
57.895
7.64
0.00
0.00
2.62
150
151
1.302832
AAGGCGCTGGACAGAAAGG
60.303
57.895
7.64
0.00
0.00
3.11
151
152
2.747855
GGCGCTGGACAGAAAGGG
60.748
66.667
7.64
0.00
0.00
3.95
152
153
3.435186
GCGCTGGACAGAAAGGGC
61.435
66.667
0.00
0.00
43.80
5.19
153
154
3.121030
CGCTGGACAGAAAGGGCG
61.121
66.667
3.00
0.00
36.89
6.13
154
155
3.435186
GCTGGACAGAAAGGGCGC
61.435
66.667
0.00
0.00
0.00
6.53
155
156
2.348998
CTGGACAGAAAGGGCGCT
59.651
61.111
7.64
0.00
0.00
5.92
156
157
2.032528
TGGACAGAAAGGGCGCTG
59.967
61.111
7.64
0.00
38.10
5.18
157
158
2.347490
GGACAGAAAGGGCGCTGA
59.653
61.111
7.64
0.00
36.07
4.26
158
159
2.035442
GGACAGAAAGGGCGCTGAC
61.035
63.158
7.64
1.42
36.07
3.51
159
160
1.301716
GACAGAAAGGGCGCTGACA
60.302
57.895
7.64
0.00
36.07
3.58
160
161
0.884704
GACAGAAAGGGCGCTGACAA
60.885
55.000
7.64
0.00
36.07
3.18
161
162
0.465460
ACAGAAAGGGCGCTGACAAA
60.465
50.000
7.64
0.00
36.07
2.83
162
163
0.239347
CAGAAAGGGCGCTGACAAAG
59.761
55.000
7.64
0.00
34.06
2.77
173
174
1.693467
CTGACAAAGCTACGCGTACA
58.307
50.000
16.41
9.04
0.00
2.90
174
175
1.385743
CTGACAAAGCTACGCGTACAC
59.614
52.381
16.41
10.66
0.00
2.90
175
176
1.269154
TGACAAAGCTACGCGTACACA
60.269
47.619
16.41
0.00
0.00
3.72
176
177
1.788308
GACAAAGCTACGCGTACACAA
59.212
47.619
16.41
0.00
0.00
3.33
177
178
2.203401
ACAAAGCTACGCGTACACAAA
58.797
42.857
16.41
0.00
0.00
2.83
178
179
2.033492
ACAAAGCTACGCGTACACAAAC
60.033
45.455
16.41
0.90
0.00
2.93
179
180
1.142474
AAGCTACGCGTACACAAACC
58.858
50.000
16.41
0.00
0.00
3.27
180
181
0.316204
AGCTACGCGTACACAAACCT
59.684
50.000
16.41
0.48
0.00
3.50
181
182
0.712222
GCTACGCGTACACAAACCTC
59.288
55.000
16.41
0.00
0.00
3.85
182
183
1.931709
GCTACGCGTACACAAACCTCA
60.932
52.381
16.41
0.00
0.00
3.86
183
184
1.717645
CTACGCGTACACAAACCTCAC
59.282
52.381
16.41
0.00
0.00
3.51
184
185
0.103572
ACGCGTACACAAACCTCACT
59.896
50.000
11.67
0.00
0.00
3.41
185
186
0.506932
CGCGTACACAAACCTCACTG
59.493
55.000
0.00
0.00
0.00
3.66
186
187
1.578583
GCGTACACAAACCTCACTGT
58.421
50.000
0.00
0.00
0.00
3.55
187
188
1.937899
GCGTACACAAACCTCACTGTT
59.062
47.619
0.00
0.00
0.00
3.16
188
189
2.353579
GCGTACACAAACCTCACTGTTT
59.646
45.455
0.00
0.00
38.95
2.83
189
190
3.181504
GCGTACACAAACCTCACTGTTTT
60.182
43.478
0.00
0.00
36.33
2.43
190
191
4.034279
GCGTACACAAACCTCACTGTTTTA
59.966
41.667
0.00
0.00
36.33
1.52
191
192
5.734311
CGTACACAAACCTCACTGTTTTAG
58.266
41.667
0.00
0.00
36.33
1.85
192
193
4.632538
ACACAAACCTCACTGTTTTAGC
57.367
40.909
0.00
0.00
36.33
3.09
193
194
4.270008
ACACAAACCTCACTGTTTTAGCT
58.730
39.130
0.00
0.00
36.33
3.32
194
195
4.335594
ACACAAACCTCACTGTTTTAGCTC
59.664
41.667
0.00
0.00
36.33
4.09
195
196
4.576463
CACAAACCTCACTGTTTTAGCTCT
59.424
41.667
0.00
0.00
36.33
4.09
196
197
4.576463
ACAAACCTCACTGTTTTAGCTCTG
59.424
41.667
0.00
0.00
36.33
3.35
197
198
4.689612
AACCTCACTGTTTTAGCTCTGA
57.310
40.909
0.00
0.00
0.00
3.27
198
199
4.264460
ACCTCACTGTTTTAGCTCTGAG
57.736
45.455
0.00
0.00
30.67
3.35
199
200
3.898123
ACCTCACTGTTTTAGCTCTGAGA
59.102
43.478
9.28
0.00
31.86
3.27
200
201
4.530161
ACCTCACTGTTTTAGCTCTGAGAT
59.470
41.667
9.28
4.41
31.86
2.75
201
202
5.108517
CCTCACTGTTTTAGCTCTGAGATC
58.891
45.833
9.28
0.00
31.86
2.75
202
203
5.078411
TCACTGTTTTAGCTCTGAGATCC
57.922
43.478
9.28
0.00
0.00
3.36
203
204
4.774726
TCACTGTTTTAGCTCTGAGATCCT
59.225
41.667
9.28
0.00
0.00
3.24
204
205
4.869297
CACTGTTTTAGCTCTGAGATCCTG
59.131
45.833
9.28
0.00
0.00
3.86
205
206
3.866651
TGTTTTAGCTCTGAGATCCTGC
58.133
45.455
9.28
0.00
0.00
4.85
206
207
3.261643
TGTTTTAGCTCTGAGATCCTGCA
59.738
43.478
9.28
0.00
0.00
4.41
207
208
4.080695
TGTTTTAGCTCTGAGATCCTGCAT
60.081
41.667
9.28
0.00
0.00
3.96
208
209
3.747854
TTAGCTCTGAGATCCTGCATG
57.252
47.619
9.28
0.00
0.00
4.06
209
210
0.107081
AGCTCTGAGATCCTGCATGC
59.893
55.000
11.82
11.82
0.00
4.06
210
211
1.222766
GCTCTGAGATCCTGCATGCG
61.223
60.000
14.09
7.87
0.00
4.73
211
212
0.104487
CTCTGAGATCCTGCATGCGT
59.896
55.000
14.09
0.00
0.00
5.24
212
213
0.538584
TCTGAGATCCTGCATGCGTT
59.461
50.000
14.09
0.00
0.00
4.84
213
214
1.065926
TCTGAGATCCTGCATGCGTTT
60.066
47.619
14.09
0.00
0.00
3.60
214
215
1.063616
CTGAGATCCTGCATGCGTTTG
59.936
52.381
14.09
3.06
0.00
2.93
215
216
1.089920
GAGATCCTGCATGCGTTTGT
58.910
50.000
14.09
0.00
0.00
2.83
216
217
1.063174
GAGATCCTGCATGCGTTTGTC
59.937
52.381
14.09
7.44
0.00
3.18
217
218
1.089920
GATCCTGCATGCGTTTGTCT
58.910
50.000
14.09
0.00
0.00
3.41
218
219
0.806868
ATCCTGCATGCGTTTGTCTG
59.193
50.000
14.09
0.00
0.00
3.51
219
220
0.534877
TCCTGCATGCGTTTGTCTGT
60.535
50.000
14.09
0.00
0.00
3.41
220
221
0.386352
CCTGCATGCGTTTGTCTGTG
60.386
55.000
14.09
0.00
0.00
3.66
221
222
0.587768
CTGCATGCGTTTGTCTGTGA
59.412
50.000
14.09
0.00
0.00
3.58
222
223
0.307453
TGCATGCGTTTGTCTGTGAC
59.693
50.000
14.09
0.00
0.00
3.67
223
224
0.722469
GCATGCGTTTGTCTGTGACG
60.722
55.000
0.00
0.00
39.61
4.35
224
225
0.858583
CATGCGTTTGTCTGTGACGA
59.141
50.000
0.00
0.00
38.99
4.20
225
226
1.260297
CATGCGTTTGTCTGTGACGAA
59.740
47.619
0.00
0.00
38.99
3.85
226
227
1.577468
TGCGTTTGTCTGTGACGAAT
58.423
45.000
4.01
0.00
38.09
3.34
227
228
2.745102
TGCGTTTGTCTGTGACGAATA
58.255
42.857
4.01
0.00
38.09
1.75
228
229
3.322369
TGCGTTTGTCTGTGACGAATAT
58.678
40.909
4.01
0.00
38.09
1.28
229
230
4.487019
TGCGTTTGTCTGTGACGAATATA
58.513
39.130
4.01
0.00
38.09
0.86
230
231
4.561213
TGCGTTTGTCTGTGACGAATATAG
59.439
41.667
4.01
0.00
38.09
1.31
231
232
4.548346
GCGTTTGTCTGTGACGAATATAGC
60.548
45.833
4.01
4.86
38.09
2.97
232
233
4.026804
CGTTTGTCTGTGACGAATATAGCC
60.027
45.833
4.01
0.00
38.09
3.93
233
234
5.109903
GTTTGTCTGTGACGAATATAGCCT
58.890
41.667
4.01
0.00
38.09
4.58
234
235
4.307443
TGTCTGTGACGAATATAGCCTG
57.693
45.455
0.00
0.00
34.95
4.85
235
236
3.068165
TGTCTGTGACGAATATAGCCTGG
59.932
47.826
0.00
0.00
34.95
4.45
236
237
2.035961
TCTGTGACGAATATAGCCTGGC
59.964
50.000
11.65
11.65
0.00
4.85
237
238
1.269569
TGTGACGAATATAGCCTGGCG
60.270
52.381
13.96
0.00
0.00
5.69
238
239
1.037493
TGACGAATATAGCCTGGCGT
58.963
50.000
13.96
8.95
34.39
5.68
239
240
1.269569
TGACGAATATAGCCTGGCGTG
60.270
52.381
13.96
1.90
31.58
5.34
240
241
0.750850
ACGAATATAGCCTGGCGTGT
59.249
50.000
13.96
5.89
0.00
4.49
241
242
1.958579
ACGAATATAGCCTGGCGTGTA
59.041
47.619
13.96
8.04
0.00
2.90
242
243
2.288030
ACGAATATAGCCTGGCGTGTAC
60.288
50.000
13.96
4.08
0.00
2.90
243
244
2.685100
GAATATAGCCTGGCGTGTACC
58.315
52.381
13.96
0.00
0.00
3.34
244
245
0.601558
ATATAGCCTGGCGTGTACCG
59.398
55.000
13.96
0.00
40.40
4.02
245
246
1.457823
TATAGCCTGGCGTGTACCGG
61.458
60.000
13.96
0.00
36.94
5.28
248
249
3.687102
CCTGGCGTGTACCGGTGA
61.687
66.667
19.93
0.00
36.94
4.02
249
250
2.577059
CTGGCGTGTACCGGTGAT
59.423
61.111
19.93
0.00
36.94
3.06
250
251
1.809619
CTGGCGTGTACCGGTGATG
60.810
63.158
19.93
10.36
36.94
3.07
251
252
3.192922
GGCGTGTACCGGTGATGC
61.193
66.667
19.93
19.65
36.94
3.91
252
253
2.433491
GCGTGTACCGGTGATGCA
60.433
61.111
19.93
8.14
36.94
3.96
253
254
1.813753
GCGTGTACCGGTGATGCAT
60.814
57.895
19.93
0.00
36.94
3.96
254
255
1.762222
GCGTGTACCGGTGATGCATC
61.762
60.000
19.93
20.14
36.94
3.91
255
256
0.459411
CGTGTACCGGTGATGCATCA
60.459
55.000
25.42
25.42
0.00
3.07
256
257
1.732941
GTGTACCGGTGATGCATCAA
58.267
50.000
30.24
12.43
38.75
2.57
257
258
2.288666
GTGTACCGGTGATGCATCAAT
58.711
47.619
30.24
17.84
38.75
2.57
258
259
2.287915
GTGTACCGGTGATGCATCAATC
59.712
50.000
30.24
22.47
38.75
2.67
259
260
2.093235
TGTACCGGTGATGCATCAATCA
60.093
45.455
30.24
18.25
38.75
2.57
260
261
1.671979
ACCGGTGATGCATCAATCAG
58.328
50.000
30.24
20.24
37.24
2.90
261
262
0.309922
CCGGTGATGCATCAATCAGC
59.690
55.000
30.24
17.92
46.69
4.26
264
265
2.776312
GTGATGCATCAATCAGCAGG
57.224
50.000
30.24
0.00
44.94
4.85
265
266
2.294979
GTGATGCATCAATCAGCAGGA
58.705
47.619
30.24
1.15
44.94
3.86
266
267
2.290916
GTGATGCATCAATCAGCAGGAG
59.709
50.000
30.24
0.00
44.94
3.69
267
268
2.171870
TGATGCATCAATCAGCAGGAGA
59.828
45.455
26.87
0.00
44.94
3.71
268
269
2.793288
TGCATCAATCAGCAGGAGAA
57.207
45.000
0.00
0.00
35.51
2.87
269
270
2.362736
TGCATCAATCAGCAGGAGAAC
58.637
47.619
0.00
0.00
35.51
3.01
270
271
2.026542
TGCATCAATCAGCAGGAGAACT
60.027
45.455
0.00
0.00
35.51
3.01
279
280
3.401032
CAGGAGAACTGGTACCCCT
57.599
57.895
10.07
4.21
43.70
4.79
280
281
1.196012
CAGGAGAACTGGTACCCCTC
58.804
60.000
10.07
10.33
43.70
4.30
281
282
0.042881
AGGAGAACTGGTACCCCTCC
59.957
60.000
22.24
22.24
42.73
4.30
282
283
1.328430
GGAGAACTGGTACCCCTCCG
61.328
65.000
18.07
3.35
34.75
4.63
289
290
0.706433
TGGTACCCCTCCGTAAGAGT
59.294
55.000
10.07
0.00
41.47
3.24
326
327
9.830975
GATGGCCCAAATGTAAAAATAACTAAT
57.169
29.630
0.00
0.00
0.00
1.73
446
447
3.431912
TCGCGATGCAAATATACATCACC
59.568
43.478
3.71
3.94
42.28
4.02
1288
1747
1.115467
GCCGAAGAAGGAGGATGAGA
58.885
55.000
0.00
0.00
0.00
3.27
1402
1870
1.546961
GACGAAGGAGGAGTTCTGGA
58.453
55.000
0.00
0.00
0.00
3.86
1559
2030
7.835682
ACATCTTCATTTTGGACCATCTATTGA
59.164
33.333
0.00
0.00
0.00
2.57
1645
2116
2.650322
ACACACTTTTTGACGGTCCAT
58.350
42.857
5.55
0.00
0.00
3.41
1708
2179
5.207110
TCTATTGGAGATGCTCTAAGTGC
57.793
43.478
0.00
0.00
34.66
4.40
1709
2180
2.698855
TTGGAGATGCTCTAAGTGCC
57.301
50.000
0.00
0.00
0.00
5.01
1710
2181
0.833287
TGGAGATGCTCTAAGTGCCC
59.167
55.000
0.00
0.00
0.00
5.36
1711
2182
1.127343
GGAGATGCTCTAAGTGCCCT
58.873
55.000
0.00
0.00
0.00
5.19
1712
2183
1.069978
GGAGATGCTCTAAGTGCCCTC
59.930
57.143
0.00
0.00
0.00
4.30
1713
2184
2.038659
GAGATGCTCTAAGTGCCCTCT
58.961
52.381
0.00
0.00
0.00
3.69
1714
2185
2.433970
GAGATGCTCTAAGTGCCCTCTT
59.566
50.000
0.00
0.00
0.00
2.85
1715
2186
2.170187
AGATGCTCTAAGTGCCCTCTTG
59.830
50.000
0.00
0.00
0.00
3.02
1716
2187
1.352083
TGCTCTAAGTGCCCTCTTGT
58.648
50.000
0.00
0.00
0.00
3.16
1717
2188
1.699634
TGCTCTAAGTGCCCTCTTGTT
59.300
47.619
0.00
0.00
0.00
2.83
1718
2189
2.106511
TGCTCTAAGTGCCCTCTTGTTT
59.893
45.455
0.00
0.00
0.00
2.83
1719
2190
2.485814
GCTCTAAGTGCCCTCTTGTTTG
59.514
50.000
0.00
0.00
0.00
2.93
1720
2191
2.485814
CTCTAAGTGCCCTCTTGTTTGC
59.514
50.000
0.00
0.00
0.00
3.68
1721
2192
1.197721
CTAAGTGCCCTCTTGTTTGCG
59.802
52.381
0.00
0.00
0.00
4.85
1722
2193
2.050077
GTGCCCTCTTGTTTGCGC
60.050
61.111
0.00
0.00
0.00
6.09
1723
2194
3.294493
TGCCCTCTTGTTTGCGCC
61.294
61.111
4.18
0.00
0.00
6.53
1724
2195
3.294493
GCCCTCTTGTTTGCGCCA
61.294
61.111
4.18
0.00
0.00
5.69
1725
2196
2.644992
CCCTCTTGTTTGCGCCAC
59.355
61.111
4.18
1.63
0.00
5.01
1726
2197
2.192861
CCCTCTTGTTTGCGCCACA
61.193
57.895
4.18
4.94
0.00
4.17
1727
2198
1.008538
CCTCTTGTTTGCGCCACAC
60.009
57.895
4.18
0.00
0.00
3.82
1728
2199
1.008538
CTCTTGTTTGCGCCACACC
60.009
57.895
4.18
0.00
0.00
4.16
1729
2200
1.723608
CTCTTGTTTGCGCCACACCA
61.724
55.000
4.18
0.00
0.00
4.17
1730
2201
1.299316
CTTGTTTGCGCCACACCAG
60.299
57.895
4.18
0.00
0.00
4.00
1731
2202
1.723608
CTTGTTTGCGCCACACCAGA
61.724
55.000
4.18
0.00
0.00
3.86
1732
2203
1.315981
TTGTTTGCGCCACACCAGAA
61.316
50.000
4.18
0.00
0.00
3.02
1733
2204
1.008538
GTTTGCGCCACACCAGAAG
60.009
57.895
4.18
0.00
0.00
2.85
1734
2205
1.153066
TTTGCGCCACACCAGAAGA
60.153
52.632
4.18
0.00
0.00
2.87
1735
2206
0.749818
TTTGCGCCACACCAGAAGAA
60.750
50.000
4.18
0.00
0.00
2.52
1736
2207
0.537143
TTGCGCCACACCAGAAGAAT
60.537
50.000
4.18
0.00
0.00
2.40
1737
2208
0.955428
TGCGCCACACCAGAAGAATC
60.955
55.000
4.18
0.00
0.00
2.52
1738
2209
0.955428
GCGCCACACCAGAAGAATCA
60.955
55.000
0.00
0.00
0.00
2.57
1739
2210
1.522668
CGCCACACCAGAAGAATCAA
58.477
50.000
0.00
0.00
0.00
2.57
1740
2211
1.466167
CGCCACACCAGAAGAATCAAG
59.534
52.381
0.00
0.00
0.00
3.02
1741
2212
2.783135
GCCACACCAGAAGAATCAAGA
58.217
47.619
0.00
0.00
0.00
3.02
1742
2213
3.350833
GCCACACCAGAAGAATCAAGAT
58.649
45.455
0.00
0.00
0.00
2.40
1743
2214
3.128242
GCCACACCAGAAGAATCAAGATG
59.872
47.826
0.00
0.00
0.00
2.90
1744
2215
4.330250
CCACACCAGAAGAATCAAGATGT
58.670
43.478
0.00
0.00
0.00
3.06
1745
2216
4.155462
CCACACCAGAAGAATCAAGATGTG
59.845
45.833
0.00
0.00
35.74
3.21
1746
2217
4.758674
CACACCAGAAGAATCAAGATGTGT
59.241
41.667
0.00
0.00
35.00
3.72
1747
2218
4.758674
ACACCAGAAGAATCAAGATGTGTG
59.241
41.667
0.00
0.00
33.55
3.82
1748
2219
4.155462
CACCAGAAGAATCAAGATGTGTGG
59.845
45.833
0.00
0.00
0.00
4.17
1749
2220
3.128242
CCAGAAGAATCAAGATGTGTGGC
59.872
47.826
0.00
0.00
0.00
5.01
1750
2221
3.005554
AGAAGAATCAAGATGTGTGGCG
58.994
45.455
0.00
0.00
0.00
5.69
1751
2222
1.089920
AGAATCAAGATGTGTGGCGC
58.910
50.000
0.00
0.00
0.00
6.53
1752
2223
0.804364
GAATCAAGATGTGTGGCGCA
59.196
50.000
10.83
0.00
0.00
6.09
1753
2224
1.199789
GAATCAAGATGTGTGGCGCAA
59.800
47.619
10.83
0.00
0.00
4.85
1754
2225
0.806868
ATCAAGATGTGTGGCGCAAG
59.193
50.000
10.83
0.00
43.44
4.01
1755
2226
1.210931
CAAGATGTGTGGCGCAAGG
59.789
57.895
10.83
0.00
38.28
3.61
1756
2227
1.973281
AAGATGTGTGGCGCAAGGG
60.973
57.895
10.83
0.00
38.28
3.95
1757
2228
4.120331
GATGTGTGGCGCAAGGGC
62.120
66.667
10.83
0.00
42.69
5.19
1764
2235
2.049156
GGCGCAAGGGCAAAGAAC
60.049
61.111
10.83
0.00
41.24
3.01
1765
2236
2.564721
GGCGCAAGGGCAAAGAACT
61.565
57.895
10.83
0.00
41.24
3.01
1766
2237
1.081175
GCGCAAGGGCAAAGAACTC
60.081
57.895
0.30
0.00
41.24
3.01
1767
2238
1.207593
CGCAAGGGCAAAGAACTCG
59.792
57.895
0.00
0.00
41.24
4.18
1768
2239
1.227999
CGCAAGGGCAAAGAACTCGA
61.228
55.000
0.00
0.00
41.24
4.04
1769
2240
1.168714
GCAAGGGCAAAGAACTCGAT
58.831
50.000
0.00
0.00
40.72
3.59
1770
2241
1.131315
GCAAGGGCAAAGAACTCGATC
59.869
52.381
0.00
0.00
40.72
3.69
1771
2242
2.426522
CAAGGGCAAAGAACTCGATCA
58.573
47.619
0.00
0.00
0.00
2.92
1772
2243
3.012518
CAAGGGCAAAGAACTCGATCAT
58.987
45.455
0.00
0.00
0.00
2.45
1773
2244
2.911484
AGGGCAAAGAACTCGATCATC
58.089
47.619
0.00
0.00
0.00
2.92
1774
2245
2.237143
AGGGCAAAGAACTCGATCATCA
59.763
45.455
0.00
0.00
0.00
3.07
1775
2246
2.611292
GGGCAAAGAACTCGATCATCAG
59.389
50.000
0.00
0.00
0.00
2.90
1776
2247
3.265791
GGCAAAGAACTCGATCATCAGT
58.734
45.455
0.00
0.00
0.00
3.41
1777
2248
3.308323
GGCAAAGAACTCGATCATCAGTC
59.692
47.826
0.00
0.00
0.00
3.51
1778
2249
3.928992
GCAAAGAACTCGATCATCAGTCA
59.071
43.478
0.00
0.00
0.00
3.41
1779
2250
4.569966
GCAAAGAACTCGATCATCAGTCAT
59.430
41.667
0.00
0.00
0.00
3.06
1780
2251
5.276773
GCAAAGAACTCGATCATCAGTCATC
60.277
44.000
0.00
0.00
0.00
2.92
1781
2252
5.588958
AAGAACTCGATCATCAGTCATCA
57.411
39.130
0.00
0.00
0.00
3.07
1782
2253
4.930963
AGAACTCGATCATCAGTCATCAC
58.069
43.478
0.00
0.00
0.00
3.06
1783
2254
4.400567
AGAACTCGATCATCAGTCATCACA
59.599
41.667
0.00
0.00
0.00
3.58
1784
2255
4.933505
ACTCGATCATCAGTCATCACAT
57.066
40.909
0.00
0.00
0.00
3.21
1785
2256
4.869215
ACTCGATCATCAGTCATCACATC
58.131
43.478
0.00
0.00
0.00
3.06
1786
2257
4.236147
CTCGATCATCAGTCATCACATCC
58.764
47.826
0.00
0.00
0.00
3.51
1787
2258
3.638160
TCGATCATCAGTCATCACATCCA
59.362
43.478
0.00
0.00
0.00
3.41
1788
2259
3.739810
CGATCATCAGTCATCACATCCAC
59.260
47.826
0.00
0.00
0.00
4.02
1789
2260
3.169355
TCATCAGTCATCACATCCACG
57.831
47.619
0.00
0.00
0.00
4.94
1790
2261
1.596260
CATCAGTCATCACATCCACGC
59.404
52.381
0.00
0.00
0.00
5.34
1791
2262
0.458370
TCAGTCATCACATCCACGCG
60.458
55.000
3.53
3.53
0.00
6.01
1792
2263
1.811266
AGTCATCACATCCACGCGC
60.811
57.895
5.73
0.00
0.00
6.86
1793
2264
2.511373
TCATCACATCCACGCGCC
60.511
61.111
5.73
0.00
0.00
6.53
1794
2265
2.819154
CATCACATCCACGCGCCA
60.819
61.111
5.73
0.00
0.00
5.69
1795
2266
2.046411
ATCACATCCACGCGCCAA
60.046
55.556
5.73
0.00
0.00
4.52
1796
2267
2.398554
ATCACATCCACGCGCCAAC
61.399
57.895
5.73
0.00
0.00
3.77
1797
2268
3.353029
CACATCCACGCGCCAACA
61.353
61.111
5.73
0.00
0.00
3.33
1798
2269
2.593148
ACATCCACGCGCCAACAA
60.593
55.556
5.73
0.00
0.00
2.83
1799
2270
2.126888
CATCCACGCGCCAACAAC
60.127
61.111
5.73
0.00
0.00
3.32
1800
2271
2.593148
ATCCACGCGCCAACAACA
60.593
55.556
5.73
0.00
0.00
3.33
1801
2272
2.616330
ATCCACGCGCCAACAACAG
61.616
57.895
5.73
0.00
0.00
3.16
1802
2273
4.326766
CCACGCGCCAACAACAGG
62.327
66.667
5.73
0.00
0.00
4.00
1803
2274
4.326766
CACGCGCCAACAACAGGG
62.327
66.667
5.73
0.00
0.00
4.45
1804
2275
4.555709
ACGCGCCAACAACAGGGA
62.556
61.111
5.73
0.00
0.00
4.20
1805
2276
4.025401
CGCGCCAACAACAGGGAC
62.025
66.667
0.00
0.00
0.00
4.46
1806
2277
2.594592
GCGCCAACAACAGGGACT
60.595
61.111
0.00
0.00
43.88
3.85
1807
2278
2.617274
GCGCCAACAACAGGGACTC
61.617
63.158
0.00
0.00
34.60
3.36
1808
2279
2.317609
CGCCAACAACAGGGACTCG
61.318
63.158
0.00
0.00
34.60
4.18
1809
2280
1.227853
GCCAACAACAGGGACTCGT
60.228
57.895
0.00
0.00
34.60
4.18
1810
2281
1.228657
GCCAACAACAGGGACTCGTC
61.229
60.000
0.00
0.00
34.60
4.20
1967
2439
4.344865
GGCGGACCCAGGCAGAAA
62.345
66.667
0.00
0.00
0.00
2.52
2076
2554
1.076014
TTTCTTCCCGCTTTCCCCC
59.924
57.895
0.00
0.00
0.00
5.40
2101
2579
2.042979
CCCTCCCATTTTCTCCTTTCCA
59.957
50.000
0.00
0.00
0.00
3.53
2124
2602
1.764054
CCAATCTCCCTCCCGCTCT
60.764
63.158
0.00
0.00
0.00
4.09
2449
2929
3.760035
CCACGCCCAGTACGCTCT
61.760
66.667
0.00
0.00
0.00
4.09
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
4
5
4.681978
ACCAGTCGCGCAGAACCC
62.682
66.667
8.75
0.00
0.00
4.11
5
6
3.414700
CACCAGTCGCGCAGAACC
61.415
66.667
8.75
0.00
0.00
3.62
6
7
2.661866
ACACCAGTCGCGCAGAAC
60.662
61.111
8.75
1.77
0.00
3.01
7
8
2.661537
CACACCAGTCGCGCAGAA
60.662
61.111
8.75
0.00
0.00
3.02
8
9
4.662961
CCACACCAGTCGCGCAGA
62.663
66.667
8.75
2.49
0.00
4.26
9
10
4.969196
ACCACACCAGTCGCGCAG
62.969
66.667
8.75
0.00
0.00
5.18
10
11
4.539083
AACCACACCAGTCGCGCA
62.539
61.111
8.75
0.00
0.00
6.09
11
12
4.012895
CAACCACACCAGTCGCGC
62.013
66.667
0.00
0.00
0.00
6.86
12
13
3.345808
CCAACCACACCAGTCGCG
61.346
66.667
0.00
0.00
0.00
5.87
13
14
2.203153
ACCAACCACACCAGTCGC
60.203
61.111
0.00
0.00
0.00
5.19
14
15
2.542907
GCACCAACCACACCAGTCG
61.543
63.158
0.00
0.00
0.00
4.18
15
16
2.542907
CGCACCAACCACACCAGTC
61.543
63.158
0.00
0.00
0.00
3.51
16
17
2.515991
CGCACCAACCACACCAGT
60.516
61.111
0.00
0.00
0.00
4.00
17
18
2.118404
AACGCACCAACCACACCAG
61.118
57.895
0.00
0.00
0.00
4.00
18
19
2.044848
AACGCACCAACCACACCA
60.045
55.556
0.00
0.00
0.00
4.17
19
20
2.058829
CTCAACGCACCAACCACACC
62.059
60.000
0.00
0.00
0.00
4.16
20
21
1.355210
CTCAACGCACCAACCACAC
59.645
57.895
0.00
0.00
0.00
3.82
21
22
2.477176
GCTCAACGCACCAACCACA
61.477
57.895
0.00
0.00
38.92
4.17
22
23
2.331451
GCTCAACGCACCAACCAC
59.669
61.111
0.00
0.00
38.92
4.16
23
24
2.124529
TGCTCAACGCACCAACCA
60.125
55.556
0.00
0.00
45.47
3.67
31
32
1.201921
CCACGAAGTTATGCTCAACGC
60.202
52.381
0.00
0.00
41.61
4.84
32
33
1.393539
CCCACGAAGTTATGCTCAACG
59.606
52.381
0.00
0.00
41.61
4.10
33
34
1.737793
CCCCACGAAGTTATGCTCAAC
59.262
52.381
0.00
0.00
41.61
3.18
34
35
1.349688
ACCCCACGAAGTTATGCTCAA
59.650
47.619
0.00
0.00
41.61
3.02
35
36
0.981183
ACCCCACGAAGTTATGCTCA
59.019
50.000
0.00
0.00
41.61
4.26
36
37
2.007608
GAACCCCACGAAGTTATGCTC
58.992
52.381
0.00
0.00
41.61
4.26
37
38
1.674817
CGAACCCCACGAAGTTATGCT
60.675
52.381
0.00
0.00
41.61
3.79
38
39
0.725117
CGAACCCCACGAAGTTATGC
59.275
55.000
0.00
0.00
41.61
3.14
39
40
1.365699
CCGAACCCCACGAAGTTATG
58.634
55.000
0.00
0.00
41.61
1.90
40
41
0.251073
CCCGAACCCCACGAAGTTAT
59.749
55.000
0.00
0.00
41.61
1.89
41
42
1.120795
ACCCGAACCCCACGAAGTTA
61.121
55.000
0.00
0.00
41.61
2.24
42
43
2.428622
CCCGAACCCCACGAAGTT
59.571
61.111
0.00
0.00
41.61
2.66
44
45
2.180159
ATCACCCGAACCCCACGAAG
62.180
60.000
0.00
0.00
0.00
3.79
45
46
1.770749
AATCACCCGAACCCCACGAA
61.771
55.000
0.00
0.00
0.00
3.85
46
47
2.218454
AATCACCCGAACCCCACGA
61.218
57.895
0.00
0.00
0.00
4.35
47
48
2.038269
CAATCACCCGAACCCCACG
61.038
63.158
0.00
0.00
0.00
4.94
48
49
1.677633
CCAATCACCCGAACCCCAC
60.678
63.158
0.00
0.00
0.00
4.61
49
50
1.721093
AACCAATCACCCGAACCCCA
61.721
55.000
0.00
0.00
0.00
4.96
50
51
1.076014
AACCAATCACCCGAACCCC
59.924
57.895
0.00
0.00
0.00
4.95
51
52
1.248101
CCAACCAATCACCCGAACCC
61.248
60.000
0.00
0.00
0.00
4.11
52
53
1.873270
GCCAACCAATCACCCGAACC
61.873
60.000
0.00
0.00
0.00
3.62
53
54
1.584495
GCCAACCAATCACCCGAAC
59.416
57.895
0.00
0.00
0.00
3.95
54
55
1.969064
CGCCAACCAATCACCCGAA
60.969
57.895
0.00
0.00
0.00
4.30
55
56
2.359354
CGCCAACCAATCACCCGA
60.359
61.111
0.00
0.00
0.00
5.14
56
57
3.439540
CCGCCAACCAATCACCCG
61.440
66.667
0.00
0.00
0.00
5.28
57
58
1.906333
AACCGCCAACCAATCACCC
60.906
57.895
0.00
0.00
0.00
4.61
58
59
1.288752
CAACCGCCAACCAATCACC
59.711
57.895
0.00
0.00
0.00
4.02
59
60
1.288752
CCAACCGCCAACCAATCAC
59.711
57.895
0.00
0.00
0.00
3.06
60
61
1.905843
CCCAACCGCCAACCAATCA
60.906
57.895
0.00
0.00
0.00
2.57
61
62
0.609681
TACCCAACCGCCAACCAATC
60.610
55.000
0.00
0.00
0.00
2.67
62
63
0.610785
CTACCCAACCGCCAACCAAT
60.611
55.000
0.00
0.00
0.00
3.16
63
64
1.228306
CTACCCAACCGCCAACCAA
60.228
57.895
0.00
0.00
0.00
3.67
64
65
2.432563
CTACCCAACCGCCAACCA
59.567
61.111
0.00
0.00
0.00
3.67
65
66
2.360726
CCTACCCAACCGCCAACC
60.361
66.667
0.00
0.00
0.00
3.77
66
67
3.060000
GCCTACCCAACCGCCAAC
61.060
66.667
0.00
0.00
0.00
3.77
67
68
3.561120
CTGCCTACCCAACCGCCAA
62.561
63.158
0.00
0.00
0.00
4.52
68
69
4.028490
CTGCCTACCCAACCGCCA
62.028
66.667
0.00
0.00
0.00
5.69
70
71
3.026431
TAGCTGCCTACCCAACCGC
62.026
63.158
0.00
0.00
0.00
5.68
71
72
1.153429
GTAGCTGCCTACCCAACCG
60.153
63.158
0.00
0.00
38.38
4.44
72
73
4.957164
GTAGCTGCCTACCCAACC
57.043
61.111
0.00
0.00
38.38
3.77
78
79
0.178301
GAGGTTGGGTAGCTGCCTAC
59.822
60.000
21.02
17.43
42.60
3.18
79
80
0.981277
GGAGGTTGGGTAGCTGCCTA
60.981
60.000
21.02
12.45
36.79
3.93
80
81
2.301738
GGAGGTTGGGTAGCTGCCT
61.302
63.158
21.02
0.00
36.79
4.75
81
82
2.272471
GGAGGTTGGGTAGCTGCC
59.728
66.667
13.24
13.24
36.79
4.85
82
83
2.125106
CGGAGGTTGGGTAGCTGC
60.125
66.667
0.00
0.00
39.11
5.25
95
96
0.745845
CTTGCAACTGATCCCCGGAG
60.746
60.000
0.73
0.00
0.00
4.63
96
97
1.299648
CTTGCAACTGATCCCCGGA
59.700
57.895
0.73
0.00
0.00
5.14
97
98
0.251916
TACTTGCAACTGATCCCCGG
59.748
55.000
0.00
0.00
0.00
5.73
98
99
1.338674
TGTACTTGCAACTGATCCCCG
60.339
52.381
0.00
0.00
0.00
5.73
99
100
2.359900
CTGTACTTGCAACTGATCCCC
58.640
52.381
0.00
0.00
0.00
4.81
100
101
1.740025
GCTGTACTTGCAACTGATCCC
59.260
52.381
0.00
0.00
0.00
3.85
101
102
2.417933
CTGCTGTACTTGCAACTGATCC
59.582
50.000
13.38
0.00
40.13
3.36
102
103
3.070018
ACTGCTGTACTTGCAACTGATC
58.930
45.455
13.38
0.00
40.13
2.92
103
104
3.070018
GACTGCTGTACTTGCAACTGAT
58.930
45.455
13.38
0.00
40.13
2.90
104
105
2.158971
TGACTGCTGTACTTGCAACTGA
60.159
45.455
13.38
0.00
40.13
3.41
105
106
2.212652
TGACTGCTGTACTTGCAACTG
58.787
47.619
13.38
6.60
40.13
3.16
106
107
2.487934
CTGACTGCTGTACTTGCAACT
58.512
47.619
13.38
0.00
40.13
3.16
107
108
1.069636
GCTGACTGCTGTACTTGCAAC
60.070
52.381
13.38
11.13
40.13
4.17
108
109
1.229428
GCTGACTGCTGTACTTGCAA
58.771
50.000
13.38
0.00
40.13
4.08
109
110
0.106521
TGCTGACTGCTGTACTTGCA
59.893
50.000
12.19
12.19
43.37
4.08
110
111
0.795085
CTGCTGACTGCTGTACTTGC
59.205
55.000
5.87
0.00
43.37
4.01
111
112
1.436600
CCTGCTGACTGCTGTACTTG
58.563
55.000
5.87
0.00
43.37
3.16
112
113
0.321122
GCCTGCTGACTGCTGTACTT
60.321
55.000
5.87
0.00
43.37
2.24
113
114
1.294780
GCCTGCTGACTGCTGTACT
59.705
57.895
5.87
0.00
43.37
2.73
114
115
0.603707
TTGCCTGCTGACTGCTGTAC
60.604
55.000
5.87
0.00
43.37
2.90
115
116
0.321034
CTTGCCTGCTGACTGCTGTA
60.321
55.000
5.87
0.00
43.37
2.74
116
117
1.600076
CTTGCCTGCTGACTGCTGT
60.600
57.895
5.87
0.00
43.37
4.40
117
118
2.333417
CCTTGCCTGCTGACTGCTG
61.333
63.158
5.87
5.14
43.37
4.41
118
119
2.033757
CCTTGCCTGCTGACTGCT
59.966
61.111
5.87
0.00
43.37
4.24
119
120
3.745803
GCCTTGCCTGCTGACTGC
61.746
66.667
0.00
0.00
43.25
4.40
120
121
3.429141
CGCCTTGCCTGCTGACTG
61.429
66.667
0.00
0.00
0.00
3.51
130
131
2.192608
CTTTCTGTCCAGCGCCTTGC
62.193
60.000
2.29
0.00
46.98
4.01
131
132
1.580845
CCTTTCTGTCCAGCGCCTTG
61.581
60.000
2.29
0.00
0.00
3.61
132
133
1.302832
CCTTTCTGTCCAGCGCCTT
60.303
57.895
2.29
0.00
0.00
4.35
133
134
2.348998
CCTTTCTGTCCAGCGCCT
59.651
61.111
2.29
0.00
0.00
5.52
134
135
2.747855
CCCTTTCTGTCCAGCGCC
60.748
66.667
2.29
0.00
0.00
6.53
135
136
3.435186
GCCCTTTCTGTCCAGCGC
61.435
66.667
0.00
0.00
0.00
5.92
136
137
3.121030
CGCCCTTTCTGTCCAGCG
61.121
66.667
0.00
0.00
37.39
5.18
137
138
3.435186
GCGCCCTTTCTGTCCAGC
61.435
66.667
0.00
0.00
0.00
4.85
138
139
2.037136
CAGCGCCCTTTCTGTCCAG
61.037
63.158
2.29
0.00
0.00
3.86
139
140
2.032528
CAGCGCCCTTTCTGTCCA
59.967
61.111
2.29
0.00
0.00
4.02
140
141
2.035442
GTCAGCGCCCTTTCTGTCC
61.035
63.158
2.29
0.00
0.00
4.02
141
142
0.884704
TTGTCAGCGCCCTTTCTGTC
60.885
55.000
2.29
0.00
0.00
3.51
142
143
0.465460
TTTGTCAGCGCCCTTTCTGT
60.465
50.000
2.29
0.00
0.00
3.41
143
144
0.239347
CTTTGTCAGCGCCCTTTCTG
59.761
55.000
2.29
0.00
0.00
3.02
144
145
1.518903
GCTTTGTCAGCGCCCTTTCT
61.519
55.000
2.29
0.00
39.29
2.52
145
146
1.081175
GCTTTGTCAGCGCCCTTTC
60.081
57.895
2.29
0.00
39.29
2.62
146
147
3.042560
GCTTTGTCAGCGCCCTTT
58.957
55.556
2.29
0.00
39.29
3.11
163
164
1.717645
GTGAGGTTTGTGTACGCGTAG
59.282
52.381
21.25
0.00
0.00
3.51
164
165
1.337703
AGTGAGGTTTGTGTACGCGTA
59.662
47.619
16.41
16.41
0.00
4.42
165
166
0.103572
AGTGAGGTTTGTGTACGCGT
59.896
50.000
19.17
19.17
0.00
6.01
166
167
0.506932
CAGTGAGGTTTGTGTACGCG
59.493
55.000
3.53
3.53
0.00
6.01
167
168
1.578583
ACAGTGAGGTTTGTGTACGC
58.421
50.000
0.00
0.00
0.00
4.42
168
169
4.609691
AAAACAGTGAGGTTTGTGTACG
57.390
40.909
0.00
0.00
40.64
3.67
169
170
5.296035
AGCTAAAACAGTGAGGTTTGTGTAC
59.704
40.000
0.00
0.00
40.64
2.90
170
171
5.433526
AGCTAAAACAGTGAGGTTTGTGTA
58.566
37.500
0.00
0.00
40.64
2.90
171
172
4.270008
AGCTAAAACAGTGAGGTTTGTGT
58.730
39.130
0.00
0.00
40.64
3.72
172
173
4.576463
AGAGCTAAAACAGTGAGGTTTGTG
59.424
41.667
0.00
0.00
40.64
3.33
173
174
4.576463
CAGAGCTAAAACAGTGAGGTTTGT
59.424
41.667
0.00
0.00
40.64
2.83
174
175
4.816385
TCAGAGCTAAAACAGTGAGGTTTG
59.184
41.667
0.00
0.00
40.64
2.93
175
176
5.036117
TCAGAGCTAAAACAGTGAGGTTT
57.964
39.130
0.00
0.00
42.49
3.27
176
177
4.345257
TCTCAGAGCTAAAACAGTGAGGTT
59.655
41.667
0.00
0.00
33.66
3.50
177
178
3.898123
TCTCAGAGCTAAAACAGTGAGGT
59.102
43.478
0.00
0.00
33.66
3.85
178
179
4.527509
TCTCAGAGCTAAAACAGTGAGG
57.472
45.455
0.00
0.00
33.66
3.86
179
180
5.105392
AGGATCTCAGAGCTAAAACAGTGAG
60.105
44.000
0.00
0.00
34.06
3.51
180
181
4.774726
AGGATCTCAGAGCTAAAACAGTGA
59.225
41.667
0.00
0.00
0.00
3.41
181
182
4.869297
CAGGATCTCAGAGCTAAAACAGTG
59.131
45.833
0.00
0.00
0.00
3.66
182
183
4.622695
GCAGGATCTCAGAGCTAAAACAGT
60.623
45.833
0.00
0.00
0.00
3.55
183
184
3.870419
GCAGGATCTCAGAGCTAAAACAG
59.130
47.826
0.00
0.00
0.00
3.16
184
185
3.261643
TGCAGGATCTCAGAGCTAAAACA
59.738
43.478
0.00
0.00
0.00
2.83
185
186
3.866651
TGCAGGATCTCAGAGCTAAAAC
58.133
45.455
0.00
0.00
0.00
2.43
186
187
4.449131
CATGCAGGATCTCAGAGCTAAAA
58.551
43.478
0.00
0.00
0.00
1.52
187
188
3.743584
GCATGCAGGATCTCAGAGCTAAA
60.744
47.826
14.21
0.00
0.00
1.85
188
189
2.224233
GCATGCAGGATCTCAGAGCTAA
60.224
50.000
14.21
0.00
0.00
3.09
189
190
1.343789
GCATGCAGGATCTCAGAGCTA
59.656
52.381
14.21
0.00
0.00
3.32
190
191
0.107081
GCATGCAGGATCTCAGAGCT
59.893
55.000
14.21
0.00
0.00
4.09
191
192
1.222766
CGCATGCAGGATCTCAGAGC
61.223
60.000
19.57
0.00
0.00
4.09
192
193
0.104487
ACGCATGCAGGATCTCAGAG
59.896
55.000
19.57
0.00
0.00
3.35
193
194
0.538584
AACGCATGCAGGATCTCAGA
59.461
50.000
19.57
0.00
0.00
3.27
194
195
1.063616
CAAACGCATGCAGGATCTCAG
59.936
52.381
19.57
0.00
0.00
3.35
195
196
1.089112
CAAACGCATGCAGGATCTCA
58.911
50.000
19.57
0.00
0.00
3.27
196
197
1.063174
GACAAACGCATGCAGGATCTC
59.937
52.381
19.57
0.49
0.00
2.75
197
198
1.089920
GACAAACGCATGCAGGATCT
58.910
50.000
19.57
0.00
0.00
2.75
198
199
1.089920
AGACAAACGCATGCAGGATC
58.910
50.000
19.57
8.10
0.00
3.36
199
200
0.806868
CAGACAAACGCATGCAGGAT
59.193
50.000
19.57
0.00
0.00
3.24
200
201
0.534877
ACAGACAAACGCATGCAGGA
60.535
50.000
19.57
0.00
0.00
3.86
201
202
0.386352
CACAGACAAACGCATGCAGG
60.386
55.000
19.57
4.59
0.00
4.85
202
203
0.587768
TCACAGACAAACGCATGCAG
59.412
50.000
19.57
12.98
0.00
4.41
203
204
0.307453
GTCACAGACAAACGCATGCA
59.693
50.000
19.57
0.00
32.09
3.96
204
205
0.722469
CGTCACAGACAAACGCATGC
60.722
55.000
7.91
7.91
32.09
4.06
205
206
0.858583
TCGTCACAGACAAACGCATG
59.141
50.000
0.00
0.00
36.40
4.06
206
207
1.577468
TTCGTCACAGACAAACGCAT
58.423
45.000
0.00
0.00
36.40
4.73
207
208
1.577468
ATTCGTCACAGACAAACGCA
58.423
45.000
0.00
0.00
36.40
5.24
208
209
3.991605
ATATTCGTCACAGACAAACGC
57.008
42.857
0.00
0.00
36.40
4.84
209
210
4.026804
GGCTATATTCGTCACAGACAAACG
60.027
45.833
0.00
0.00
37.74
3.60
210
211
5.005779
CAGGCTATATTCGTCACAGACAAAC
59.994
44.000
0.00
0.00
32.09
2.93
211
212
5.109210
CAGGCTATATTCGTCACAGACAAA
58.891
41.667
0.00
0.00
32.09
2.83
212
213
4.441495
CCAGGCTATATTCGTCACAGACAA
60.441
45.833
0.00
0.00
32.09
3.18
213
214
3.068165
CCAGGCTATATTCGTCACAGACA
59.932
47.826
0.00
0.00
32.09
3.41
214
215
3.643763
CCAGGCTATATTCGTCACAGAC
58.356
50.000
0.00
0.00
0.00
3.51
215
216
2.035961
GCCAGGCTATATTCGTCACAGA
59.964
50.000
3.29
0.00
0.00
3.41
216
217
2.408050
GCCAGGCTATATTCGTCACAG
58.592
52.381
3.29
0.00
0.00
3.66
217
218
1.269569
CGCCAGGCTATATTCGTCACA
60.270
52.381
10.54
0.00
0.00
3.58
218
219
1.269621
ACGCCAGGCTATATTCGTCAC
60.270
52.381
10.54
0.00
0.00
3.67
219
220
1.037493
ACGCCAGGCTATATTCGTCA
58.963
50.000
10.54
0.00
0.00
4.35
220
221
1.269621
ACACGCCAGGCTATATTCGTC
60.270
52.381
10.54
0.00
0.00
4.20
221
222
0.750850
ACACGCCAGGCTATATTCGT
59.249
50.000
10.54
0.00
0.00
3.85
222
223
2.325761
GTACACGCCAGGCTATATTCG
58.674
52.381
10.54
0.00
0.00
3.34
223
224
2.685100
GGTACACGCCAGGCTATATTC
58.315
52.381
10.54
0.00
0.00
1.75
224
225
1.000506
CGGTACACGCCAGGCTATATT
59.999
52.381
10.54
0.00
34.82
1.28
225
226
0.601558
CGGTACACGCCAGGCTATAT
59.398
55.000
10.54
0.00
34.82
0.86
226
227
1.457823
CCGGTACACGCCAGGCTATA
61.458
60.000
10.54
0.00
42.52
1.31
227
228
2.792947
CCGGTACACGCCAGGCTAT
61.793
63.158
10.54
0.00
42.52
2.97
228
229
3.454573
CCGGTACACGCCAGGCTA
61.455
66.667
10.54
0.00
42.52
3.93
231
232
3.014085
ATCACCGGTACACGCCAGG
62.014
63.158
6.87
0.00
42.52
4.45
232
233
1.809619
CATCACCGGTACACGCCAG
60.810
63.158
6.87
0.00
42.52
4.85
233
234
2.263227
CATCACCGGTACACGCCA
59.737
61.111
6.87
0.00
42.52
5.69
234
235
3.192922
GCATCACCGGTACACGCC
61.193
66.667
6.87
0.00
42.52
5.68
235
236
1.762222
GATGCATCACCGGTACACGC
61.762
60.000
21.92
8.76
42.52
5.34
236
237
0.459411
TGATGCATCACCGGTACACG
60.459
55.000
25.42
0.00
43.80
4.49
237
238
1.732941
TTGATGCATCACCGGTACAC
58.267
50.000
28.72
0.00
36.36
2.90
238
239
2.093235
TGATTGATGCATCACCGGTACA
60.093
45.455
28.72
17.57
36.36
2.90
239
240
2.545526
CTGATTGATGCATCACCGGTAC
59.454
50.000
28.72
15.50
36.36
3.34
240
241
2.837498
CTGATTGATGCATCACCGGTA
58.163
47.619
28.72
14.51
36.36
4.02
241
242
1.671979
CTGATTGATGCATCACCGGT
58.328
50.000
28.72
14.81
36.36
5.28
242
243
0.309922
GCTGATTGATGCATCACCGG
59.690
55.000
28.72
25.35
36.36
5.28
243
244
1.002792
CTGCTGATTGATGCATCACCG
60.003
52.381
28.72
15.32
38.59
4.94
244
245
1.337071
CCTGCTGATTGATGCATCACC
59.663
52.381
28.72
21.96
38.59
4.02
245
246
2.290916
CTCCTGCTGATTGATGCATCAC
59.709
50.000
28.72
18.42
38.59
3.06
246
247
2.171870
TCTCCTGCTGATTGATGCATCA
59.828
45.455
25.42
25.42
38.59
3.07
247
248
2.847441
TCTCCTGCTGATTGATGCATC
58.153
47.619
20.14
20.14
38.59
3.91
248
249
2.950309
GTTCTCCTGCTGATTGATGCAT
59.050
45.455
0.00
0.00
38.59
3.96
249
250
2.026542
AGTTCTCCTGCTGATTGATGCA
60.027
45.455
0.00
0.00
37.63
3.96
250
251
2.355132
CAGTTCTCCTGCTGATTGATGC
59.645
50.000
0.00
0.00
34.87
3.91
251
252
2.943690
CCAGTTCTCCTGCTGATTGATG
59.056
50.000
0.00
0.00
40.06
3.07
252
253
2.575279
ACCAGTTCTCCTGCTGATTGAT
59.425
45.455
0.00
0.00
40.06
2.57
253
254
1.980765
ACCAGTTCTCCTGCTGATTGA
59.019
47.619
0.00
0.00
40.06
2.57
254
255
2.486472
ACCAGTTCTCCTGCTGATTG
57.514
50.000
0.00
0.00
40.06
2.67
255
256
2.237392
GGTACCAGTTCTCCTGCTGATT
59.763
50.000
7.15
0.00
40.06
2.57
256
257
1.834263
GGTACCAGTTCTCCTGCTGAT
59.166
52.381
7.15
0.00
40.06
2.90
257
258
1.267121
GGTACCAGTTCTCCTGCTGA
58.733
55.000
7.15
0.00
40.06
4.26
258
259
3.842869
GGTACCAGTTCTCCTGCTG
57.157
57.895
7.15
0.00
40.06
4.41
272
273
4.071423
GAGATACTCTTACGGAGGGGTAC
58.929
52.174
0.00
0.00
45.83
3.34
273
274
3.073650
GGAGATACTCTTACGGAGGGGTA
59.926
52.174
0.00
0.00
45.83
3.69
274
275
2.158490
GGAGATACTCTTACGGAGGGGT
60.158
54.545
0.00
0.00
45.83
4.95
275
276
2.158505
TGGAGATACTCTTACGGAGGGG
60.159
54.545
0.00
0.00
45.83
4.79
276
277
3.225177
TGGAGATACTCTTACGGAGGG
57.775
52.381
0.00
0.00
45.83
4.30
277
278
6.239396
TCTATTGGAGATACTCTTACGGAGG
58.761
44.000
0.00
0.00
45.83
4.30
278
279
7.757526
CATCTATTGGAGATACTCTTACGGAG
58.242
42.308
0.00
0.00
43.52
4.63
279
280
7.689446
CATCTATTGGAGATACTCTTACGGA
57.311
40.000
0.00
0.00
43.52
4.69
385
386
3.682292
GAGGAGGCCGCGGTTCAAT
62.682
63.158
28.70
16.24
0.00
2.57
408
409
1.196808
CGCGAGGTGTTGCATTTTACT
59.803
47.619
0.00
0.00
31.63
2.24
946
1388
1.817911
TACGTGCCGATCCACCAACA
61.818
55.000
0.00
0.00
32.10
3.33
1402
1870
1.215647
CGGAGCTACGGAACTGCTT
59.784
57.895
11.59
0.00
37.16
3.91
1627
2098
6.399639
AAAATATGGACCGTCAAAAAGTGT
57.600
33.333
0.00
0.00
0.00
3.55
1645
2116
6.259167
CGGTCCAAAATCGGAGATGTAAAATA
59.741
38.462
0.00
0.00
45.12
1.40
1706
2177
3.294493
GGCGCAAACAAGAGGGCA
61.294
61.111
10.83
0.00
44.46
5.36
1707
2178
3.294493
TGGCGCAAACAAGAGGGC
61.294
61.111
10.83
0.00
42.26
5.19
1708
2179
2.192861
TGTGGCGCAAACAAGAGGG
61.193
57.895
10.83
0.00
0.00
4.30
1709
2180
1.008538
GTGTGGCGCAAACAAGAGG
60.009
57.895
15.71
0.00
0.00
3.69
1710
2181
1.008538
GGTGTGGCGCAAACAAGAG
60.009
57.895
15.71
0.00
0.00
2.85
1711
2182
1.723608
CTGGTGTGGCGCAAACAAGA
61.724
55.000
15.71
5.80
23.86
3.02
1712
2183
1.299316
CTGGTGTGGCGCAAACAAG
60.299
57.895
15.71
6.55
0.00
3.16
1713
2184
1.315981
TTCTGGTGTGGCGCAAACAA
61.316
50.000
15.71
0.26
0.00
2.83
1714
2185
1.723608
CTTCTGGTGTGGCGCAAACA
61.724
55.000
10.83
10.79
0.00
2.83
1715
2186
1.008538
CTTCTGGTGTGGCGCAAAC
60.009
57.895
10.83
7.74
0.00
2.93
1716
2187
0.749818
TTCTTCTGGTGTGGCGCAAA
60.750
50.000
10.83
0.00
0.00
3.68
1717
2188
0.537143
ATTCTTCTGGTGTGGCGCAA
60.537
50.000
10.83
0.00
0.00
4.85
1718
2189
0.955428
GATTCTTCTGGTGTGGCGCA
60.955
55.000
10.83
0.00
0.00
6.09
1719
2190
0.955428
TGATTCTTCTGGTGTGGCGC
60.955
55.000
0.00
0.00
0.00
6.53
1720
2191
1.466167
CTTGATTCTTCTGGTGTGGCG
59.534
52.381
0.00
0.00
0.00
5.69
1721
2192
2.783135
TCTTGATTCTTCTGGTGTGGC
58.217
47.619
0.00
0.00
0.00
5.01
1722
2193
4.155462
CACATCTTGATTCTTCTGGTGTGG
59.845
45.833
0.00
0.00
35.98
4.17
1723
2194
4.758674
ACACATCTTGATTCTTCTGGTGTG
59.241
41.667
0.00
0.00
40.54
3.82
1724
2195
4.758674
CACACATCTTGATTCTTCTGGTGT
59.241
41.667
0.00
0.00
37.43
4.16
1725
2196
4.155462
CCACACATCTTGATTCTTCTGGTG
59.845
45.833
0.00
0.00
0.00
4.17
1726
2197
4.330250
CCACACATCTTGATTCTTCTGGT
58.670
43.478
0.00
0.00
0.00
4.00
1727
2198
3.128242
GCCACACATCTTGATTCTTCTGG
59.872
47.826
0.00
0.00
0.00
3.86
1728
2199
3.181513
CGCCACACATCTTGATTCTTCTG
60.182
47.826
0.00
0.00
0.00
3.02
1729
2200
3.005554
CGCCACACATCTTGATTCTTCT
58.994
45.455
0.00
0.00
0.00
2.85
1730
2201
2.476854
GCGCCACACATCTTGATTCTTC
60.477
50.000
0.00
0.00
0.00
2.87
1731
2202
1.470098
GCGCCACACATCTTGATTCTT
59.530
47.619
0.00
0.00
0.00
2.52
1732
2203
1.089920
GCGCCACACATCTTGATTCT
58.910
50.000
0.00
0.00
0.00
2.40
1733
2204
0.804364
TGCGCCACACATCTTGATTC
59.196
50.000
4.18
0.00
0.00
2.52
1734
2205
1.200716
CTTGCGCCACACATCTTGATT
59.799
47.619
4.18
0.00
0.00
2.57
1735
2206
0.806868
CTTGCGCCACACATCTTGAT
59.193
50.000
4.18
0.00
0.00
2.57
1736
2207
1.236616
CCTTGCGCCACACATCTTGA
61.237
55.000
4.18
0.00
0.00
3.02
1737
2208
1.210931
CCTTGCGCCACACATCTTG
59.789
57.895
4.18
0.00
0.00
3.02
1738
2209
1.973281
CCCTTGCGCCACACATCTT
60.973
57.895
4.18
0.00
0.00
2.40
1739
2210
2.360350
CCCTTGCGCCACACATCT
60.360
61.111
4.18
0.00
0.00
2.90
1740
2211
4.120331
GCCCTTGCGCCACACATC
62.120
66.667
4.18
0.00
0.00
3.06
1741
2212
4.972733
TGCCCTTGCGCCACACAT
62.973
61.111
4.18
0.00
41.78
3.21
1743
2214
3.846602
CTTTGCCCTTGCGCCACAC
62.847
63.158
4.18
0.00
41.78
3.82
1744
2215
3.604667
CTTTGCCCTTGCGCCACA
61.605
61.111
4.18
0.00
41.78
4.17
1745
2216
2.855514
TTCTTTGCCCTTGCGCCAC
61.856
57.895
4.18
0.00
41.78
5.01
1746
2217
2.520500
TTCTTTGCCCTTGCGCCA
60.521
55.556
4.18
0.00
41.78
5.69
1747
2218
2.049156
GTTCTTTGCCCTTGCGCC
60.049
61.111
4.18
0.00
41.78
6.53
1748
2219
1.081175
GAGTTCTTTGCCCTTGCGC
60.081
57.895
0.00
0.00
41.78
6.09
1749
2220
1.207593
CGAGTTCTTTGCCCTTGCG
59.792
57.895
0.00
0.00
41.78
4.85
1750
2221
1.131315
GATCGAGTTCTTTGCCCTTGC
59.869
52.381
0.00
0.00
38.26
4.01
1751
2222
2.426522
TGATCGAGTTCTTTGCCCTTG
58.573
47.619
0.00
0.00
0.00
3.61
1752
2223
2.859165
TGATCGAGTTCTTTGCCCTT
57.141
45.000
0.00
0.00
0.00
3.95
1753
2224
2.237143
TGATGATCGAGTTCTTTGCCCT
59.763
45.455
0.00
0.00
0.00
5.19
1754
2225
2.611292
CTGATGATCGAGTTCTTTGCCC
59.389
50.000
0.00
0.00
0.00
5.36
1755
2226
3.265791
ACTGATGATCGAGTTCTTTGCC
58.734
45.455
0.00
0.00
0.00
4.52
1756
2227
3.928992
TGACTGATGATCGAGTTCTTTGC
59.071
43.478
0.00
0.00
0.00
3.68
1757
2228
5.809051
TGATGACTGATGATCGAGTTCTTTG
59.191
40.000
0.00
0.00
0.00
2.77
1758
2229
5.809562
GTGATGACTGATGATCGAGTTCTTT
59.190
40.000
0.00
0.00
0.00
2.52
1759
2230
5.105595
TGTGATGACTGATGATCGAGTTCTT
60.106
40.000
0.00
0.00
0.00
2.52
1760
2231
4.400567
TGTGATGACTGATGATCGAGTTCT
59.599
41.667
0.00
0.00
0.00
3.01
1761
2232
4.676546
TGTGATGACTGATGATCGAGTTC
58.323
43.478
0.00
0.00
0.00
3.01
1762
2233
4.725790
TGTGATGACTGATGATCGAGTT
57.274
40.909
0.00
0.00
0.00
3.01
1763
2234
4.261952
GGATGTGATGACTGATGATCGAGT
60.262
45.833
0.00
0.00
0.00
4.18
1764
2235
4.236147
GGATGTGATGACTGATGATCGAG
58.764
47.826
0.00
0.00
0.00
4.04
1765
2236
3.638160
TGGATGTGATGACTGATGATCGA
59.362
43.478
0.00
0.00
0.00
3.59
1766
2237
3.739810
GTGGATGTGATGACTGATGATCG
59.260
47.826
0.00
0.00
0.00
3.69
1767
2238
3.739810
CGTGGATGTGATGACTGATGATC
59.260
47.826
0.00
0.00
0.00
2.92
1768
2239
3.725490
CGTGGATGTGATGACTGATGAT
58.275
45.455
0.00
0.00
0.00
2.45
1769
2240
2.739609
GCGTGGATGTGATGACTGATGA
60.740
50.000
0.00
0.00
0.00
2.92
1770
2241
1.596260
GCGTGGATGTGATGACTGATG
59.404
52.381
0.00
0.00
0.00
3.07
1771
2242
1.803998
CGCGTGGATGTGATGACTGAT
60.804
52.381
0.00
0.00
0.00
2.90
1772
2243
0.458370
CGCGTGGATGTGATGACTGA
60.458
55.000
0.00
0.00
0.00
3.41
1773
2244
2.001357
CGCGTGGATGTGATGACTG
58.999
57.895
0.00
0.00
0.00
3.51
1774
2245
1.811266
GCGCGTGGATGTGATGACT
60.811
57.895
8.43
0.00
0.00
3.41
1775
2246
2.703409
GCGCGTGGATGTGATGAC
59.297
61.111
8.43
0.00
0.00
3.06
1776
2247
2.511373
GGCGCGTGGATGTGATGA
60.511
61.111
8.43
0.00
0.00
2.92
1777
2248
2.397754
TTGGCGCGTGGATGTGATG
61.398
57.895
8.43
0.00
0.00
3.07
1778
2249
2.046411
TTGGCGCGTGGATGTGAT
60.046
55.556
8.43
0.00
0.00
3.06
1779
2250
3.047280
GTTGGCGCGTGGATGTGA
61.047
61.111
8.43
0.00
0.00
3.58
1780
2251
2.902419
TTGTTGGCGCGTGGATGTG
61.902
57.895
8.43
0.00
0.00
3.21
1781
2252
2.593148
TTGTTGGCGCGTGGATGT
60.593
55.556
8.43
0.00
0.00
3.06
1782
2253
2.126888
GTTGTTGGCGCGTGGATG
60.127
61.111
8.43
0.00
0.00
3.51
1783
2254
2.593148
TGTTGTTGGCGCGTGGAT
60.593
55.556
8.43
0.00
0.00
3.41
1784
2255
3.276091
CTGTTGTTGGCGCGTGGA
61.276
61.111
8.43
0.00
0.00
4.02
1785
2256
4.326766
CCTGTTGTTGGCGCGTGG
62.327
66.667
8.43
0.00
0.00
4.94
1786
2257
4.326766
CCCTGTTGTTGGCGCGTG
62.327
66.667
8.43
0.00
0.00
5.34
1787
2258
4.555709
TCCCTGTTGTTGGCGCGT
62.556
61.111
8.43
0.00
0.00
6.01
1788
2259
4.025401
GTCCCTGTTGTTGGCGCG
62.025
66.667
0.00
0.00
0.00
6.86
1789
2260
2.594592
AGTCCCTGTTGTTGGCGC
60.595
61.111
0.00
0.00
0.00
6.53
1790
2261
2.317609
CGAGTCCCTGTTGTTGGCG
61.318
63.158
0.00
0.00
0.00
5.69
1791
2262
1.227853
ACGAGTCCCTGTTGTTGGC
60.228
57.895
0.00
0.00
0.00
4.52
1792
2263
0.602905
GGACGAGTCCCTGTTGTTGG
60.603
60.000
11.07
0.00
43.94
3.77
1793
2264
2.914379
GGACGAGTCCCTGTTGTTG
58.086
57.895
11.07
0.00
43.94
3.33
1803
2274
5.107414
GCTCTTACTTTTCTTTGGACGAGTC
60.107
44.000
0.00
0.00
0.00
3.36
1804
2275
4.750598
GCTCTTACTTTTCTTTGGACGAGT
59.249
41.667
0.00
0.00
0.00
4.18
1805
2276
4.750098
TGCTCTTACTTTTCTTTGGACGAG
59.250
41.667
0.00
0.00
0.00
4.18
1806
2277
4.699637
TGCTCTTACTTTTCTTTGGACGA
58.300
39.130
0.00
0.00
0.00
4.20
1807
2278
5.409826
AGATGCTCTTACTTTTCTTTGGACG
59.590
40.000
0.00
0.00
0.00
4.79
1808
2279
6.128145
GGAGATGCTCTTACTTTTCTTTGGAC
60.128
42.308
0.00
0.00
0.00
4.02
1809
2280
5.940470
GGAGATGCTCTTACTTTTCTTTGGA
59.060
40.000
0.00
0.00
0.00
3.53
1810
2281
5.707298
TGGAGATGCTCTTACTTTTCTTTGG
59.293
40.000
0.00
0.00
0.00
3.28
1811
2282
6.622462
GCTGGAGATGCTCTTACTTTTCTTTG
60.622
42.308
0.00
0.00
0.00
2.77
1812
2283
5.414144
GCTGGAGATGCTCTTACTTTTCTTT
59.586
40.000
0.00
0.00
0.00
2.52
1813
2284
4.940654
GCTGGAGATGCTCTTACTTTTCTT
59.059
41.667
0.00
0.00
0.00
2.52
1817
2288
2.419297
CGGCTGGAGATGCTCTTACTTT
60.419
50.000
0.00
0.00
0.00
2.66
1995
2468
1.282875
GCCCTTTCGCTTGTGACAC
59.717
57.895
0.00
0.00
0.00
3.67
1996
2469
2.250939
CGCCCTTTCGCTTGTGACA
61.251
57.895
0.00
0.00
0.00
3.58
2076
2554
1.925959
AGGAGAAAATGGGAGGGAAGG
59.074
52.381
0.00
0.00
0.00
3.46
2101
2579
3.090532
GGAGGGAGATTGGCGGGT
61.091
66.667
0.00
0.00
0.00
5.28
2309
2787
4.778143
GCGATGGCCCTGTTCCGT
62.778
66.667
0.00
0.00
0.00
4.69
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.