Multiple sequence alignment - TraesCS3D01G261500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G261500 chr3D 100.000 6147 0 0 1 6147 363587414 363593560 0.000000e+00 11352.0
1 TraesCS3D01G261500 chr3D 90.071 423 36 5 524 943 363353620 363354039 1.510000e-150 544.0
2 TraesCS3D01G261500 chr3D 89.123 285 21 3 244 527 363334126 363334401 4.560000e-91 346.0
3 TraesCS3D01G261500 chr3A 94.537 3423 133 21 2094 5493 484628460 484631851 0.000000e+00 5236.0
4 TraesCS3D01G261500 chr3A 90.534 1162 60 23 806 1959 484627245 484628364 0.000000e+00 1491.0
5 TraesCS3D01G261500 chr3A 91.686 421 30 5 397 813 486594704 486594285 4.130000e-161 579.0
6 TraesCS3D01G261500 chr3A 90.071 423 38 4 393 813 484578823 484579243 4.190000e-151 545.0
7 TraesCS3D01G261500 chr3A 95.335 343 14 2 5520 5862 484633186 484633526 1.510000e-150 544.0
8 TraesCS3D01G261500 chr3A 86.667 75 6 1 2029 2099 484628360 484628434 5.110000e-11 80.5
9 TraesCS3D01G261500 chr3A 91.304 46 1 3 4145 4187 484630436 484630481 6.650000e-05 60.2
10 TraesCS3D01G261500 chr3A 94.595 37 1 1 810 846 726102930 726102965 8.610000e-04 56.5
11 TraesCS3D01G261500 chr3B 93.712 3419 151 34 2094 5493 473685933 473689306 0.000000e+00 5064.0
12 TraesCS3D01G261500 chr3B 90.698 1892 91 34 3 1878 473683820 473685642 0.000000e+00 2440.0
13 TraesCS3D01G261500 chr3B 92.429 317 14 3 5546 5862 473690655 473690961 1.570000e-120 444.0
14 TraesCS3D01G261500 chr3B 92.339 248 8 2 1863 2099 473685660 473685907 5.900000e-90 342.0
15 TraesCS3D01G261500 chr2B 89.818 550 46 8 1258 1803 729633182 729633725 0.000000e+00 697.0
16 TraesCS3D01G261500 chr2B 89.083 229 17 6 1393 1617 678030084 678029860 1.690000e-70 278.0
17 TraesCS3D01G261500 chr5A 87.054 533 53 10 1275 1803 603994705 603994185 6.860000e-164 588.0
18 TraesCS3D01G261500 chr6B 87.259 518 50 10 1275 1788 716951772 716951267 1.490000e-160 577.0
19 TraesCS3D01G261500 chr6B 96.774 31 1 0 1776 1806 716951241 716951211 1.100000e-02 52.8
20 TraesCS3D01G261500 chr7A 87.336 229 21 6 1393 1617 642879262 642879486 7.910000e-64 255.0
21 TraesCS3D01G261500 chr7A 93.750 48 2 1 697 743 682889811 682889764 3.070000e-08 71.3
22 TraesCS3D01G261500 chr2D 89.610 77 7 1 681 756 57968097 57968173 5.070000e-16 97.1
23 TraesCS3D01G261500 chr2D 91.803 61 4 1 689 749 372329677 372329736 3.950000e-12 84.2
24 TraesCS3D01G261500 chr2A 91.429 70 5 1 681 749 751235879 751235810 1.820000e-15 95.3
25 TraesCS3D01G261500 chr6D 82.353 68 11 1 687 753 66126864 66126931 2.390000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G261500 chr3D 363587414 363593560 6146 False 11352.00 11352 100.0000 1 6147 1 chr3D.!!$F3 6146
1 TraesCS3D01G261500 chr3A 484627245 484633526 6281 False 1482.34 5236 91.6754 806 5862 5 chr3A.!!$F3 5056
2 TraesCS3D01G261500 chr3B 473683820 473690961 7141 False 2072.50 5064 92.2945 3 5862 4 chr3B.!!$F1 5859
3 TraesCS3D01G261500 chr2B 729633182 729633725 543 False 697.00 697 89.8180 1258 1803 1 chr2B.!!$F1 545
4 TraesCS3D01G261500 chr5A 603994185 603994705 520 True 588.00 588 87.0540 1275 1803 1 chr5A.!!$R1 528
5 TraesCS3D01G261500 chr6B 716951211 716951772 561 True 314.90 577 92.0165 1275 1806 2 chr6B.!!$R1 531

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
246 251 0.039764 AGAGACTGGGTGGATCGACA 59.960 55.0 10.22 0.00 0.00 4.35 F
1413 1435 0.035317 ACTTTGAGGCATCACGCTGA 59.965 50.0 0.00 0.00 41.91 4.26 F
1571 1623 0.107456 CAGGTCTGTGCCTCTGTGTT 59.893 55.0 0.00 0.00 36.58 3.32 F
1608 1665 0.179100 AACGCTGGATCTGTGGATCG 60.179 55.0 0.00 0.00 46.77 3.69 F
1772 1867 0.462047 GACCACAGGTATTGCCTCGG 60.462 60.0 4.69 4.69 46.96 4.63 F
3443 3628 0.698818 ACAAACCCTCCCTGTCCATC 59.301 55.0 0.00 0.00 0.00 3.51 F
4143 4336 0.536260 CTCCTGCTGGTTCCTCAGAG 59.464 60.0 9.73 0.00 36.93 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2240 2411 0.107993 ACATGTGATGTCCTGAGGCG 60.108 55.000 0.00 0.00 39.92 5.52 R
3353 3538 0.382873 TGCAATGAGCCGATTCATGC 59.617 50.000 2.94 8.56 44.83 4.06 R
3362 3547 0.457853 CACACATGCTGCAATGAGCC 60.458 55.000 20.19 0.00 44.83 4.70 R
3432 3617 0.911769 ATTTCTGCGATGGACAGGGA 59.088 50.000 0.00 0.00 35.78 4.20 R
3696 3889 4.248859 CTGTGTCCCAGAATCACTGTTAG 58.751 47.826 0.00 0.00 44.49 2.34 R
4865 5065 1.069159 AGTGAAGTACGTGAGCAGACG 60.069 52.381 0.00 6.02 45.09 4.18 R
5943 7457 0.034337 GCCTAGTGACCGGTGTTGAA 59.966 55.000 14.63 0.00 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.675844 CGCGTGAATCCCATCTAAACAA 59.324 45.455 0.00 0.00 0.00 2.83
77 78 3.532542 GGGATCTTAAACCGAGAGTTGG 58.467 50.000 0.00 0.00 39.19 3.77
81 82 0.766131 TTAAACCGAGAGTTGGGGCA 59.234 50.000 0.00 0.00 39.19 5.36
99 104 4.954118 AGGCGGGTGAGGGTGACA 62.954 66.667 0.00 0.00 0.00 3.58
113 118 2.890311 GGGTGACAATGTGGTGATGAAA 59.110 45.455 0.00 0.00 0.00 2.69
124 129 1.407437 GGTGATGAAAGGAGGCGATGT 60.407 52.381 0.00 0.00 0.00 3.06
166 171 2.844348 GGAAAGGTGTGAAGGGGATCTA 59.156 50.000 0.00 0.00 0.00 1.98
209 214 2.419739 GGGCGACAGAGAGGAGACC 61.420 68.421 0.00 0.00 0.00 3.85
211 216 1.745864 GCGACAGAGAGGAGACCGA 60.746 63.158 0.00 0.00 0.00 4.69
223 228 1.935327 GAGACCGAGTGGAGGAACCG 61.935 65.000 0.00 0.00 42.61 4.44
234 239 1.407258 GGAGGAACCGATCAGAGACTG 59.593 57.143 0.00 0.00 0.00 3.51
237 242 1.187087 GAACCGATCAGAGACTGGGT 58.813 55.000 0.00 0.00 31.51 4.51
246 251 0.039764 AGAGACTGGGTGGATCGACA 59.960 55.000 10.22 0.00 0.00 4.35
267 272 2.588989 GAGCCAGGAGGGAGCAAG 59.411 66.667 0.00 0.00 40.01 4.01
271 276 1.606531 CCAGGAGGGAGCAAGGAAG 59.393 63.158 0.00 0.00 40.01 3.46
274 279 1.616628 GGAGGGAGCAAGGAAGGGA 60.617 63.158 0.00 0.00 0.00 4.20
275 280 1.631071 GGAGGGAGCAAGGAAGGGAG 61.631 65.000 0.00 0.00 0.00 4.30
277 282 1.616628 GGGAGCAAGGAAGGGAGGA 60.617 63.158 0.00 0.00 0.00 3.71
278 283 1.208165 GGGAGCAAGGAAGGGAGGAA 61.208 60.000 0.00 0.00 0.00 3.36
279 284 0.254462 GGAGCAAGGAAGGGAGGAAG 59.746 60.000 0.00 0.00 0.00 3.46
280 285 1.280457 GAGCAAGGAAGGGAGGAAGA 58.720 55.000 0.00 0.00 0.00 2.87
281 286 1.630878 GAGCAAGGAAGGGAGGAAGAA 59.369 52.381 0.00 0.00 0.00 2.52
282 287 1.632920 AGCAAGGAAGGGAGGAAGAAG 59.367 52.381 0.00 0.00 0.00 2.85
283 288 1.630878 GCAAGGAAGGGAGGAAGAAGA 59.369 52.381 0.00 0.00 0.00 2.87
284 289 2.040412 GCAAGGAAGGGAGGAAGAAGAA 59.960 50.000 0.00 0.00 0.00 2.52
285 290 3.871851 GCAAGGAAGGGAGGAAGAAGAAG 60.872 52.174 0.00 0.00 0.00 2.85
286 291 3.569135 AGGAAGGGAGGAAGAAGAAGA 57.431 47.619 0.00 0.00 0.00 2.87
287 292 3.875571 AGGAAGGGAGGAAGAAGAAGAA 58.124 45.455 0.00 0.00 0.00 2.52
302 307 8.675705 AAGAAGAAGAAGAAGAAGAAAGGAAG 57.324 34.615 0.00 0.00 0.00 3.46
319 324 2.464865 GAAGAAGGTGATCGACATCCG 58.535 52.381 0.00 0.00 40.25 4.18
320 325 1.475403 AGAAGGTGATCGACATCCGT 58.525 50.000 0.00 0.00 39.75 4.69
326 332 1.132453 GTGATCGACATCCGTCAGTCA 59.868 52.381 0.00 0.00 42.74 3.41
380 386 6.687393 GCCTTCACCATCTCAAGATCTCAATA 60.687 42.308 0.00 0.00 31.21 1.90
439 445 1.430632 CCACGCCATGTCATCAAGC 59.569 57.895 0.00 0.00 0.00 4.01
446 452 1.615116 CCATGTCATCAAGCCACCACT 60.615 52.381 0.00 0.00 0.00 4.00
458 464 1.453155 CCACCACTGCTACCATCAAC 58.547 55.000 0.00 0.00 0.00 3.18
485 491 1.733041 CATCGCTGTTGTCGTCGGT 60.733 57.895 0.00 0.00 0.00 4.69
554 568 1.444553 CACCTCGCACTCGGTTCTC 60.445 63.158 0.00 0.00 36.13 2.87
556 570 2.636412 CCTCGCACTCGGTTCTCCA 61.636 63.158 0.00 0.00 36.13 3.86
557 571 1.289066 CTCGCACTCGGTTCTCCAA 59.711 57.895 0.00 0.00 36.13 3.53
579 593 4.079970 ACGTGGTCTTGAGTGAGATAGAA 58.920 43.478 0.00 0.00 0.00 2.10
580 594 4.707448 ACGTGGTCTTGAGTGAGATAGAAT 59.293 41.667 0.00 0.00 0.00 2.40
581 595 5.886474 ACGTGGTCTTGAGTGAGATAGAATA 59.114 40.000 0.00 0.00 0.00 1.75
582 596 6.547880 ACGTGGTCTTGAGTGAGATAGAATAT 59.452 38.462 0.00 0.00 0.00 1.28
583 597 7.081349 CGTGGTCTTGAGTGAGATAGAATATC 58.919 42.308 0.00 0.00 0.00 1.63
584 598 7.040755 CGTGGTCTTGAGTGAGATAGAATATCT 60.041 40.741 0.00 0.00 0.00 1.98
585 599 8.296713 GTGGTCTTGAGTGAGATAGAATATCTC 58.703 40.741 16.47 16.47 43.55 2.75
586 600 7.174080 TGGTCTTGAGTGAGATAGAATATCTCG 59.826 40.741 17.59 6.57 45.58 4.04
587 601 7.174253 GGTCTTGAGTGAGATAGAATATCTCGT 59.826 40.741 17.59 10.27 45.58 4.18
588 602 8.564574 GTCTTGAGTGAGATAGAATATCTCGTT 58.435 37.037 17.59 10.68 45.58 3.85
589 603 8.563732 TCTTGAGTGAGATAGAATATCTCGTTG 58.436 37.037 17.59 8.14 45.58 4.10
590 604 8.451908 TTGAGTGAGATAGAATATCTCGTTGA 57.548 34.615 17.59 4.65 45.58 3.18
591 605 7.866729 TGAGTGAGATAGAATATCTCGTTGAC 58.133 38.462 17.59 11.99 45.58 3.18
592 606 7.499232 TGAGTGAGATAGAATATCTCGTTGACA 59.501 37.037 17.59 11.89 45.58 3.58
593 607 8.226819 AGTGAGATAGAATATCTCGTTGACAA 57.773 34.615 17.59 0.00 45.58 3.18
594 608 8.687242 AGTGAGATAGAATATCTCGTTGACAAA 58.313 33.333 17.59 0.65 45.58 2.83
595 609 9.469807 GTGAGATAGAATATCTCGTTGACAAAT 57.530 33.333 17.59 0.00 45.58 2.32
596 610 9.468532 TGAGATAGAATATCTCGTTGACAAATG 57.531 33.333 17.59 0.00 45.58 2.32
597 611 9.684448 GAGATAGAATATCTCGTTGACAAATGA 57.316 33.333 10.23 0.00 35.72 2.57
625 639 2.947127 TGTCATGTCACACATTGGGA 57.053 45.000 0.00 0.00 36.53 4.37
671 686 7.415592 AAAAAGGCCATTTGAAAATCCAAAA 57.584 28.000 6.74 0.00 39.20 2.44
678 693 8.355913 GGCCATTTGAAAATCCAAAATTTTACA 58.644 29.630 2.44 0.00 39.20 2.41
715 730 3.270027 TGACGTCAGATTTTAGGCATGG 58.730 45.455 15.76 0.00 0.00 3.66
726 741 2.937469 TAGGCATGGCAAATCAAACG 57.063 45.000 22.64 0.00 0.00 3.60
777 792 2.880268 TCTGGCACACAAATGAACTGAG 59.120 45.455 0.00 0.00 0.00 3.35
779 794 1.336240 GGCACACAAATGAACTGAGGC 60.336 52.381 0.00 0.00 0.00 4.70
873 888 4.473444 ACATTGGCTGGATATTCGGATTT 58.527 39.130 0.00 0.00 0.00 2.17
976 994 0.881159 TTGGTACGGCTTCACGGTTG 60.881 55.000 0.00 0.00 38.39 3.77
1244 1266 1.666872 CCAACCGTTCGACACCTCC 60.667 63.158 0.00 0.00 0.00 4.30
1372 1394 1.708193 GGTAAACGCACCCGCATACC 61.708 60.000 0.00 0.00 39.87 2.73
1375 1397 3.969250 AACGCACCCGCATACCCTG 62.969 63.158 0.00 0.00 38.40 4.45
1383 1405 1.227263 CGCATACCCTGGAACTCGG 60.227 63.158 0.00 0.00 0.00 4.63
1399 1421 2.224305 ACTCGGACTCCTTTGGACTTTG 60.224 50.000 0.00 0.00 0.00 2.77
1400 1422 2.037251 CTCGGACTCCTTTGGACTTTGA 59.963 50.000 0.00 0.00 0.00 2.69
1401 1423 2.037251 TCGGACTCCTTTGGACTTTGAG 59.963 50.000 0.00 0.00 0.00 3.02
1402 1424 2.784347 GGACTCCTTTGGACTTTGAGG 58.216 52.381 0.00 0.00 0.00 3.86
1403 1425 2.155279 GACTCCTTTGGACTTTGAGGC 58.845 52.381 0.00 0.00 0.00 4.70
1404 1426 1.494721 ACTCCTTTGGACTTTGAGGCA 59.505 47.619 0.00 0.00 0.00 4.75
1405 1427 2.108952 ACTCCTTTGGACTTTGAGGCAT 59.891 45.455 0.00 0.00 0.00 4.40
1406 1428 2.751806 CTCCTTTGGACTTTGAGGCATC 59.248 50.000 0.00 0.00 0.00 3.91
1407 1429 2.108075 TCCTTTGGACTTTGAGGCATCA 59.892 45.455 0.00 0.00 0.00 3.07
1408 1430 2.229784 CCTTTGGACTTTGAGGCATCAC 59.770 50.000 0.00 0.00 34.35 3.06
1409 1431 1.522668 TTGGACTTTGAGGCATCACG 58.477 50.000 0.00 0.00 34.35 4.35
1410 1432 0.955428 TGGACTTTGAGGCATCACGC 60.955 55.000 0.00 0.00 34.35 5.34
1411 1433 0.674895 GGACTTTGAGGCATCACGCT 60.675 55.000 0.00 0.00 41.91 5.07
1412 1434 0.445436 GACTTTGAGGCATCACGCTG 59.555 55.000 0.00 0.00 41.91 5.18
1413 1435 0.035317 ACTTTGAGGCATCACGCTGA 59.965 50.000 0.00 0.00 41.91 4.26
1414 1436 0.445436 CTTTGAGGCATCACGCTGAC 59.555 55.000 0.00 0.00 41.91 3.51
1415 1437 0.250252 TTTGAGGCATCACGCTGACA 60.250 50.000 0.00 0.00 41.91 3.58
1416 1438 0.950555 TTGAGGCATCACGCTGACAC 60.951 55.000 0.00 0.00 41.91 3.67
1417 1439 2.433145 AGGCATCACGCTGACACG 60.433 61.111 0.00 0.00 41.91 4.49
1418 1440 4.152625 GGCATCACGCTGACACGC 62.153 66.667 0.00 0.00 41.91 5.34
1475 1527 0.463620 GCTTTGGTTTCCAGTTGCCA 59.536 50.000 0.00 0.00 33.81 4.92
1571 1623 0.107456 CAGGTCTGTGCCTCTGTGTT 59.893 55.000 0.00 0.00 36.58 3.32
1579 1636 1.869767 GTGCCTCTGTGTTTGTCTCTG 59.130 52.381 0.00 0.00 0.00 3.35
1584 1641 4.058817 CCTCTGTGTTTGTCTCTGTAACC 58.941 47.826 0.00 0.00 0.00 2.85
1608 1665 0.179100 AACGCTGGATCTGTGGATCG 60.179 55.000 0.00 0.00 46.77 3.69
1621 1678 1.394917 GTGGATCGTTCTGCACATGAC 59.605 52.381 0.00 0.00 0.00 3.06
1622 1679 1.001860 TGGATCGTTCTGCACATGACA 59.998 47.619 0.00 0.00 0.00 3.58
1626 1683 4.512944 GGATCGTTCTGCACATGACATTAT 59.487 41.667 0.00 0.00 0.00 1.28
1772 1867 0.462047 GACCACAGGTATTGCCTCGG 60.462 60.000 4.69 4.69 46.96 4.63
1806 1901 8.616076 CCTTTACAGTAGCAATAATTTGAGGAG 58.384 37.037 0.00 0.00 34.60 3.69
1809 1904 6.904626 ACAGTAGCAATAATTTGAGGAGGAT 58.095 36.000 0.00 0.00 34.60 3.24
1846 1941 6.174049 AGCTTTTACAGTTATCCCTTGAGTC 58.826 40.000 0.00 0.00 0.00 3.36
1942 2070 6.356714 GCGAGACGTTATTAGAGTTAGTTAGC 59.643 42.308 0.00 0.00 0.00 3.09
1978 2106 8.216453 GCAAGTTTAAAACATTAAGTGCTCATG 58.784 33.333 0.00 0.00 0.00 3.07
1992 2120 5.189180 AGTGCTCATGAAATTAGGGAAGTC 58.811 41.667 0.00 0.00 0.00 3.01
2043 2179 9.712305 ATGTGATACATAAGCTAACCTGTTATC 57.288 33.333 0.00 0.00 36.99 1.75
2057 2193 2.844804 CTGTTATCGAGACGAACGAACC 59.155 50.000 0.14 0.00 42.80 3.62
2163 2334 4.402474 GGCAGGGCATCTAAGTTTGTTAAT 59.598 41.667 0.00 0.00 0.00 1.40
2167 2338 7.475840 CAGGGCATCTAAGTTTGTTAATTCTC 58.524 38.462 0.00 0.00 0.00 2.87
2168 2339 7.337942 CAGGGCATCTAAGTTTGTTAATTCTCT 59.662 37.037 0.00 0.00 0.00 3.10
2227 2398 8.687242 TGTTCAAATAGGTTTTATGTGTCAACA 58.313 29.630 0.00 0.00 41.58 3.33
2240 2411 2.529894 GTGTCAACACGCACACAAAATC 59.470 45.455 0.00 0.00 42.20 2.17
2283 2454 5.416271 ACATTGTCGAAGGTACTACCAAT 57.584 39.130 8.01 0.00 41.95 3.16
2313 2484 5.613358 ACTCTTAACAAAGCATTTCTCCG 57.387 39.130 0.00 0.00 35.03 4.63
2329 2500 1.208052 CTCCGGGAGTCAATGTCATGT 59.792 52.381 16.15 0.00 0.00 3.21
2346 2517 5.091431 GTCATGTTTATGCTCTGTTTCTGC 58.909 41.667 0.00 0.00 34.21 4.26
2380 2551 5.677091 GCATCCTGGCATTTACAGTACTTTG 60.677 44.000 0.00 0.00 34.16 2.77
2526 2708 2.890808 TAGCGAATAGGAGCAACCAG 57.109 50.000 2.96 0.00 42.04 4.00
2544 2726 2.564504 CCAGTCCTGAGAGTGTGATCAA 59.435 50.000 0.00 0.00 41.22 2.57
2590 2772 8.411991 TTTTCCTTAAACGATATTCCCAGTTT 57.588 30.769 0.00 0.00 39.68 2.66
2615 2797 8.090788 TGCTCTCCCTTATAAAAATCTACTGT 57.909 34.615 0.00 0.00 0.00 3.55
2763 2945 4.350368 TGGTCAAGTCTGCATGAAAGTA 57.650 40.909 0.00 0.00 0.00 2.24
2806 2988 4.153835 CCTGACACTCAAAATTGCTCTCTC 59.846 45.833 0.00 0.00 0.00 3.20
2811 2993 7.105241 ACACTCAAAATTGCTCTCTCTTTTT 57.895 32.000 0.00 0.00 0.00 1.94
2825 3007 8.652463 GCTCTCTCTTTTTGTACTAGAATTGTC 58.348 37.037 0.00 0.00 0.00 3.18
2873 3055 9.621629 TTATTATTCGTCATTTGTAGACCCAAT 57.378 29.630 0.00 0.00 32.41 3.16
2995 3177 8.604640 TGTAATCAAATCAAACATTTGCACAT 57.395 26.923 0.00 0.00 38.50 3.21
3006 3188 4.940463 ACATTTGCACATCTGGATTATGC 58.060 39.130 8.72 8.72 36.81 3.14
3028 3210 4.811024 GCCATTCTAAAAATTAGCAAGGCC 59.189 41.667 0.00 0.00 0.00 5.19
3029 3211 5.626578 GCCATTCTAAAAATTAGCAAGGCCA 60.627 40.000 5.01 0.00 0.00 5.36
3097 3279 7.071698 TCTCTGCTAAATTGGAAGGTGAGATAT 59.928 37.037 0.00 0.00 0.00 1.63
3110 3292 8.787852 GGAAGGTGAGATATAATGAAATCAACC 58.212 37.037 0.00 0.00 0.00 3.77
3111 3293 9.566432 GAAGGTGAGATATAATGAAATCAACCT 57.434 33.333 0.00 0.00 0.00 3.50
3206 3389 8.911918 ATGTGGTGTAAATGTACTCTGTTAAA 57.088 30.769 0.00 0.00 0.00 1.52
3340 3525 4.404073 TGTTGAAGCCCACAAACAGTAATT 59.596 37.500 0.00 0.00 0.00 1.40
3362 3547 7.760131 ATTGACCTTTTATTTGCATGAATCG 57.240 32.000 0.00 0.00 0.00 3.34
3389 3574 1.100510 GCAGCATGTGTGATGATGGT 58.899 50.000 0.00 0.00 44.34 3.55
3432 3617 3.866883 CAATAAATGCCGACAAACCCT 57.133 42.857 0.00 0.00 0.00 4.34
3440 3625 1.003718 CGACAAACCCTCCCTGTCC 60.004 63.158 0.00 0.00 36.87 4.02
3443 3628 0.698818 ACAAACCCTCCCTGTCCATC 59.301 55.000 0.00 0.00 0.00 3.51
3567 3756 1.873591 CTATTTATCACGTGGCCTGCC 59.126 52.381 17.00 0.00 0.00 4.85
3568 3757 0.751643 ATTTATCACGTGGCCTGCCC 60.752 55.000 17.00 0.00 34.56 5.36
3569 3758 1.847798 TTTATCACGTGGCCTGCCCT 61.848 55.000 17.00 0.00 34.56 5.19
3570 3759 2.252072 TTATCACGTGGCCTGCCCTC 62.252 60.000 17.00 0.00 34.56 4.30
3586 3775 5.352569 CCTGCCCTCTATTTTGCTATATTCG 59.647 44.000 0.00 0.00 0.00 3.34
3680 3873 7.730067 TTTGTATTAACTCGTGTAGTCATCG 57.270 36.000 0.00 0.00 37.50 3.84
3696 3889 5.394802 AGTCATCGTTGCTGATATATCGTC 58.605 41.667 8.19 3.12 0.00 4.20
3762 3955 5.241403 ACTCTGTTTCACCAATCACCATA 57.759 39.130 0.00 0.00 0.00 2.74
3792 3985 3.509575 TCTGTTTCTTTGGCTTTGTGTGT 59.490 39.130 0.00 0.00 0.00 3.72
3793 3986 4.021544 TCTGTTTCTTTGGCTTTGTGTGTT 60.022 37.500 0.00 0.00 0.00 3.32
4066 4259 4.738252 GCTTAACAACTGTTCCCTTTTTCG 59.262 41.667 0.00 0.00 39.31 3.46
4117 4310 8.825745 GTTTGTGGCATTCTTCTAAATGAAAAA 58.174 29.630 0.00 0.00 38.64 1.94
4143 4336 0.536260 CTCCTGCTGGTTCCTCAGAG 59.464 60.000 9.73 0.00 36.93 3.35
4149 4342 4.389374 CTGCTGGTTCCTCAGAGTTTTTA 58.611 43.478 0.00 0.00 36.93 1.52
4152 4345 6.173339 TGCTGGTTCCTCAGAGTTTTTATAG 58.827 40.000 0.00 0.00 36.93 1.31
4154 4347 7.051000 GCTGGTTCCTCAGAGTTTTTATAGAT 58.949 38.462 0.00 0.00 36.93 1.98
4260 4455 8.149647 TGCCATTTAGTCATGTGAAAGAAAAAT 58.850 29.630 0.00 0.00 0.00 1.82
4283 4478 3.368013 CCAGCGTCTACTGACATGGTTAA 60.368 47.826 0.00 0.00 43.06 2.01
4284 4479 3.859961 CAGCGTCTACTGACATGGTTAAG 59.140 47.826 0.00 0.00 43.06 1.85
4285 4480 3.510360 AGCGTCTACTGACATGGTTAAGT 59.490 43.478 0.00 0.00 43.06 2.24
4287 4482 4.174009 CGTCTACTGACATGGTTAAGTGG 58.826 47.826 0.00 0.00 43.06 4.00
4331 4527 7.730084 TCAGCATTTACAGTATTGAGCTCTAT 58.270 34.615 16.19 15.55 0.00 1.98
4332 4528 8.206867 TCAGCATTTACAGTATTGAGCTCTATT 58.793 33.333 15.84 0.91 0.00 1.73
4333 4529 9.481340 CAGCATTTACAGTATTGAGCTCTATTA 57.519 33.333 15.84 0.00 0.00 0.98
4337 4533 8.888579 TTTACAGTATTGAGCTCTATTAAGCC 57.111 34.615 15.84 0.80 43.56 4.35
4338 4534 5.859495 ACAGTATTGAGCTCTATTAAGCCC 58.141 41.667 15.84 0.00 43.56 5.19
4339 4535 5.366768 ACAGTATTGAGCTCTATTAAGCCCA 59.633 40.000 15.84 0.00 43.56 5.36
4340 4536 5.931146 CAGTATTGAGCTCTATTAAGCCCAG 59.069 44.000 15.84 0.00 43.56 4.45
4341 4537 5.604650 AGTATTGAGCTCTATTAAGCCCAGT 59.395 40.000 15.84 0.00 43.56 4.00
4342 4538 6.782988 AGTATTGAGCTCTATTAAGCCCAGTA 59.217 38.462 15.84 0.00 43.56 2.74
4343 4539 6.694445 ATTGAGCTCTATTAAGCCCAGTAT 57.306 37.500 16.19 0.00 43.56 2.12
4344 4540 6.500589 TTGAGCTCTATTAAGCCCAGTATT 57.499 37.500 16.19 0.00 43.56 1.89
4345 4541 5.858381 TGAGCTCTATTAAGCCCAGTATTG 58.142 41.667 16.19 0.00 43.56 1.90
4346 4542 5.602561 TGAGCTCTATTAAGCCCAGTATTGA 59.397 40.000 16.19 0.00 43.56 2.57
4347 4543 6.107901 AGCTCTATTAAGCCCAGTATTGAG 57.892 41.667 0.00 0.00 43.56 3.02
4348 4544 4.693095 GCTCTATTAAGCCCAGTATTGAGC 59.307 45.833 0.00 0.00 38.18 4.26
4349 4545 5.512232 GCTCTATTAAGCCCAGTATTGAGCT 60.512 44.000 0.00 0.00 40.37 4.09
4350 4546 6.102897 TCTATTAAGCCCAGTATTGAGCTC 57.897 41.667 6.82 6.82 33.56 4.09
4351 4547 5.841237 TCTATTAAGCCCAGTATTGAGCTCT 59.159 40.000 16.19 0.00 33.56 4.09
4352 4548 7.010771 TCTATTAAGCCCAGTATTGAGCTCTA 58.989 38.462 16.19 7.99 33.56 2.43
4371 4567 5.707298 GCTCTATTAAGCCCAGATTGCATTA 59.293 40.000 0.00 0.00 36.22 1.90
4517 4716 6.201044 AGTGCAGCATTTAGTATGATCGTAAC 59.799 38.462 0.00 0.00 0.00 2.50
4670 4870 3.073678 TGGATGTTCGACAATTGAGTGG 58.926 45.455 13.59 0.00 0.00 4.00
4862 5062 8.725148 TGTTTTGTTTTACATGCACTGAAATTT 58.275 25.926 0.00 0.00 0.00 1.82
4865 5065 9.766277 TTTGTTTTACATGCACTGAAATTTTTC 57.234 25.926 0.00 0.00 37.69 2.29
4910 5110 6.790232 TTTGTTTTGAAGGTCCTTGAAGAT 57.210 33.333 9.46 0.00 0.00 2.40
5020 5220 3.777106 AAGTCAAAGGCTCTGATGTCA 57.223 42.857 0.00 0.00 0.00 3.58
5021 5221 3.996921 AGTCAAAGGCTCTGATGTCAT 57.003 42.857 0.00 0.00 0.00 3.06
5038 5238 5.241403 TGTCATGAACACTTGGTCCTATT 57.759 39.130 0.00 0.00 31.20 1.73
5093 5293 4.973396 CGAAGCTTTGCAAATAGTCATGA 58.027 39.130 13.23 0.00 0.00 3.07
5195 5395 4.344978 AGTACTACAGATGTCAGAAGGCA 58.655 43.478 0.00 0.00 0.00 4.75
5215 5415 4.441495 GGCAATGGTAGCCCTGTTATTTTC 60.441 45.833 0.00 0.00 46.50 2.29
5218 5418 6.332630 CAATGGTAGCCCTGTTATTTTCTTG 58.667 40.000 0.00 0.00 0.00 3.02
5225 5427 4.262420 GCCCTGTTATTTTCTTGGAAAGCA 60.262 41.667 0.00 0.00 45.70 3.91
5245 5447 9.745323 GAAAGCAATGTAATTATTTCTGTTTGC 57.255 29.630 0.00 0.00 37.80 3.68
5303 5505 4.633126 GTGTCATGCATGTACAGACTCATT 59.367 41.667 25.43 0.00 0.00 2.57
5322 5524 4.041567 TCATTGGTGTCACAGTGGATACTT 59.958 41.667 5.12 0.00 34.07 2.24
5355 5557 9.491406 AGATTATAGCATCAGAGGTATTCTCAT 57.509 33.333 0.00 0.00 44.81 2.90
5371 5573 7.547370 GGTATTCTCATATAGATTGCTTCGCTT 59.453 37.037 0.00 0.00 33.05 4.68
5389 5591 5.230182 TCGCTTATGGAGTATGCTTGTATG 58.770 41.667 0.00 0.00 32.75 2.39
5455 5657 5.593909 TGAACTCAACTGGTGTTTCATCAAT 59.406 36.000 7.96 0.00 33.60 2.57
5493 5695 5.640732 ACTTGGTTCGTGCAATCATATTTC 58.359 37.500 0.00 0.00 0.00 2.17
5500 5970 4.332543 TCGTGCAATCATATTTCCTCACAC 59.667 41.667 0.00 0.00 0.00 3.82
5534 7048 0.754957 TATTTGGAATGGCCCTGCGG 60.755 55.000 0.00 0.00 34.97 5.69
5552 7066 1.887242 GCGTGCAGTCTGTGGTCAA 60.887 57.895 0.93 0.00 0.00 3.18
5563 7077 0.251297 TGTGGTCAAGATTGCTGGGG 60.251 55.000 0.00 0.00 0.00 4.96
5569 7083 3.091545 GTCAAGATTGCTGGGGAAATGA 58.908 45.455 0.00 0.00 0.00 2.57
5594 7108 0.865111 CATGACTTCACGCGTTTGGA 59.135 50.000 10.22 0.00 0.00 3.53
5640 7154 5.181748 AGATGTCTGATCTGTTTAGTTGCC 58.818 41.667 0.00 0.00 0.00 4.52
5757 7271 2.443255 GAGCAATTGAGGGAGGGGAATA 59.557 50.000 10.34 0.00 0.00 1.75
5802 7316 5.772825 TCCTTCAACCAGATGTTTTCTTG 57.227 39.130 0.00 0.00 34.00 3.02
5812 7326 3.073650 AGATGTTTTCTTGGTCAGAGCCT 59.926 43.478 0.00 0.00 31.12 4.58
5862 7376 5.428253 CCAGTAGTTTATGCCAGAAGCTTA 58.572 41.667 0.00 0.00 44.23 3.09
5863 7377 5.294552 CCAGTAGTTTATGCCAGAAGCTTAC 59.705 44.000 0.00 0.00 44.23 2.34
5864 7378 5.874810 CAGTAGTTTATGCCAGAAGCTTACA 59.125 40.000 0.00 0.00 44.23 2.41
5865 7379 5.875359 AGTAGTTTATGCCAGAAGCTTACAC 59.125 40.000 0.00 0.00 44.23 2.90
5866 7380 3.684788 AGTTTATGCCAGAAGCTTACACG 59.315 43.478 0.00 0.00 44.23 4.49
5867 7381 3.603158 TTATGCCAGAAGCTTACACGA 57.397 42.857 0.00 0.00 44.23 4.35
5868 7382 2.472695 ATGCCAGAAGCTTACACGAA 57.527 45.000 0.00 0.00 44.23 3.85
5869 7383 1.508632 TGCCAGAAGCTTACACGAAC 58.491 50.000 0.00 0.00 44.23 3.95
5870 7384 1.070134 TGCCAGAAGCTTACACGAACT 59.930 47.619 0.00 0.00 44.23 3.01
5871 7385 1.727335 GCCAGAAGCTTACACGAACTC 59.273 52.381 0.00 0.00 38.99 3.01
5872 7386 2.610727 GCCAGAAGCTTACACGAACTCT 60.611 50.000 0.00 0.00 38.99 3.24
5873 7387 3.246619 CCAGAAGCTTACACGAACTCTC 58.753 50.000 0.00 0.00 0.00 3.20
5874 7388 3.246619 CAGAAGCTTACACGAACTCTCC 58.753 50.000 0.00 0.00 0.00 3.71
5875 7389 2.095161 AGAAGCTTACACGAACTCTCCG 60.095 50.000 0.00 0.00 0.00 4.63
5876 7390 1.531423 AGCTTACACGAACTCTCCGA 58.469 50.000 0.00 0.00 0.00 4.55
5877 7391 1.199558 AGCTTACACGAACTCTCCGAC 59.800 52.381 0.00 0.00 0.00 4.79
5878 7392 1.879646 CTTACACGAACTCTCCGACG 58.120 55.000 0.00 0.00 0.00 5.12
5879 7393 0.518636 TTACACGAACTCTCCGACGG 59.481 55.000 7.84 7.84 0.00 4.79
5880 7394 0.603707 TACACGAACTCTCCGACGGT 60.604 55.000 14.79 0.00 0.00 4.83
5881 7395 1.442184 CACGAACTCTCCGACGGTG 60.442 63.158 14.79 12.10 0.00 4.94
5882 7396 1.895707 ACGAACTCTCCGACGGTGT 60.896 57.895 14.79 8.81 0.00 4.16
5883 7397 1.285023 CGAACTCTCCGACGGTGTT 59.715 57.895 14.79 16.42 0.00 3.32
5884 7398 1.002250 CGAACTCTCCGACGGTGTTG 61.002 60.000 20.56 14.88 0.00 3.33
5885 7399 1.282930 GAACTCTCCGACGGTGTTGC 61.283 60.000 20.56 12.08 0.00 4.17
5886 7400 2.432628 CTCTCCGACGGTGTTGCC 60.433 66.667 14.79 0.00 0.00 4.52
5887 7401 2.915659 TCTCCGACGGTGTTGCCT 60.916 61.111 14.79 0.00 34.25 4.75
5888 7402 2.432628 CTCCGACGGTGTTGCCTC 60.433 66.667 14.79 0.00 34.25 4.70
5889 7403 2.915659 TCCGACGGTGTTGCCTCT 60.916 61.111 14.79 0.00 34.25 3.69
5890 7404 2.030562 CCGACGGTGTTGCCTCTT 59.969 61.111 5.48 0.00 34.25 2.85
5891 7405 1.180456 TCCGACGGTGTTGCCTCTTA 61.180 55.000 14.79 0.00 34.25 2.10
5892 7406 0.736325 CCGACGGTGTTGCCTCTTAG 60.736 60.000 5.48 0.00 34.25 2.18
5893 7407 1.352156 CGACGGTGTTGCCTCTTAGC 61.352 60.000 0.00 0.00 34.25 3.09
5894 7408 1.003718 ACGGTGTTGCCTCTTAGCC 60.004 57.895 0.00 0.00 34.25 3.93
5895 7409 1.296715 CGGTGTTGCCTCTTAGCCT 59.703 57.895 0.00 0.00 34.25 4.58
5896 7410 0.741221 CGGTGTTGCCTCTTAGCCTC 60.741 60.000 0.00 0.00 34.25 4.70
5897 7411 0.393132 GGTGTTGCCTCTTAGCCTCC 60.393 60.000 0.00 0.00 0.00 4.30
5898 7412 0.324943 GTGTTGCCTCTTAGCCTCCA 59.675 55.000 0.00 0.00 0.00 3.86
5899 7413 1.065126 GTGTTGCCTCTTAGCCTCCAT 60.065 52.381 0.00 0.00 0.00 3.41
5900 7414 2.170607 GTGTTGCCTCTTAGCCTCCATA 59.829 50.000 0.00 0.00 0.00 2.74
5901 7415 3.048600 TGTTGCCTCTTAGCCTCCATAT 58.951 45.455 0.00 0.00 0.00 1.78
5902 7416 3.459598 TGTTGCCTCTTAGCCTCCATATT 59.540 43.478 0.00 0.00 0.00 1.28
5903 7417 3.777106 TGCCTCTTAGCCTCCATATTG 57.223 47.619 0.00 0.00 0.00 1.90
5904 7418 2.224621 TGCCTCTTAGCCTCCATATTGC 60.225 50.000 0.00 0.00 0.00 3.56
5905 7419 2.224621 GCCTCTTAGCCTCCATATTGCA 60.225 50.000 0.00 0.00 0.00 4.08
5906 7420 3.672808 CCTCTTAGCCTCCATATTGCAG 58.327 50.000 0.00 0.00 0.00 4.41
5907 7421 3.326006 CCTCTTAGCCTCCATATTGCAGA 59.674 47.826 0.00 0.00 0.00 4.26
5908 7422 4.202398 CCTCTTAGCCTCCATATTGCAGAA 60.202 45.833 0.00 0.00 0.00 3.02
5909 7423 5.371526 CTCTTAGCCTCCATATTGCAGAAA 58.628 41.667 0.00 0.00 0.00 2.52
5910 7424 5.126067 TCTTAGCCTCCATATTGCAGAAAC 58.874 41.667 0.00 0.00 0.00 2.78
5911 7425 3.659183 AGCCTCCATATTGCAGAAACT 57.341 42.857 0.00 0.00 0.00 2.66
5912 7426 4.778213 AGCCTCCATATTGCAGAAACTA 57.222 40.909 0.00 0.00 0.00 2.24
5913 7427 4.455606 AGCCTCCATATTGCAGAAACTAC 58.544 43.478 0.00 0.00 0.00 2.73
5914 7428 4.164988 AGCCTCCATATTGCAGAAACTACT 59.835 41.667 0.00 0.00 0.00 2.57
5915 7429 4.884164 GCCTCCATATTGCAGAAACTACTT 59.116 41.667 0.00 0.00 0.00 2.24
5916 7430 5.008118 GCCTCCATATTGCAGAAACTACTTC 59.992 44.000 0.00 0.00 0.00 3.01
5917 7431 5.235186 CCTCCATATTGCAGAAACTACTTCG 59.765 44.000 0.00 0.00 39.22 3.79
5918 7432 4.570772 TCCATATTGCAGAAACTACTTCGC 59.429 41.667 0.00 0.00 39.22 4.70
5919 7433 4.260784 CCATATTGCAGAAACTACTTCGCC 60.261 45.833 0.00 0.00 39.22 5.54
5920 7434 2.248280 TTGCAGAAACTACTTCGCCA 57.752 45.000 0.00 0.00 39.22 5.69
5921 7435 2.472695 TGCAGAAACTACTTCGCCAT 57.527 45.000 0.00 0.00 39.22 4.40
5922 7436 2.778299 TGCAGAAACTACTTCGCCATT 58.222 42.857 0.00 0.00 39.22 3.16
5923 7437 2.483877 TGCAGAAACTACTTCGCCATTG 59.516 45.455 0.00 0.00 39.22 2.82
5924 7438 2.729156 GCAGAAACTACTTCGCCATTGC 60.729 50.000 0.00 0.00 39.22 3.56
5925 7439 2.744202 CAGAAACTACTTCGCCATTGCT 59.256 45.455 0.00 0.00 39.22 3.91
5926 7440 3.003480 AGAAACTACTTCGCCATTGCTC 58.997 45.455 0.00 0.00 39.22 4.26
5927 7441 2.472695 AACTACTTCGCCATTGCTCA 57.527 45.000 0.00 0.00 34.43 4.26
5928 7442 2.472695 ACTACTTCGCCATTGCTCAA 57.527 45.000 0.00 0.00 34.43 3.02
5929 7443 2.076863 ACTACTTCGCCATTGCTCAAC 58.923 47.619 0.00 0.00 34.43 3.18
5930 7444 2.076100 CTACTTCGCCATTGCTCAACA 58.924 47.619 0.00 0.00 34.43 3.33
5931 7445 1.538047 ACTTCGCCATTGCTCAACAT 58.462 45.000 0.00 0.00 34.43 2.71
5932 7446 1.888512 ACTTCGCCATTGCTCAACATT 59.111 42.857 0.00 0.00 34.43 2.71
5933 7447 2.297033 ACTTCGCCATTGCTCAACATTT 59.703 40.909 0.00 0.00 34.43 2.32
5934 7448 2.350899 TCGCCATTGCTCAACATTTG 57.649 45.000 0.00 0.00 34.43 2.32
5935 7449 1.885233 TCGCCATTGCTCAACATTTGA 59.115 42.857 0.00 0.00 38.17 2.69
5936 7450 2.295629 TCGCCATTGCTCAACATTTGAA 59.704 40.909 0.00 0.00 39.58 2.69
5937 7451 3.058450 CGCCATTGCTCAACATTTGAAA 58.942 40.909 0.00 0.00 39.58 2.69
5938 7452 3.493877 CGCCATTGCTCAACATTTGAAAA 59.506 39.130 0.00 0.00 39.58 2.29
5939 7453 4.152759 CGCCATTGCTCAACATTTGAAAAT 59.847 37.500 0.00 0.00 39.58 1.82
5940 7454 5.624292 GCCATTGCTCAACATTTGAAAATC 58.376 37.500 0.00 0.00 39.58 2.17
5941 7455 5.410439 GCCATTGCTCAACATTTGAAAATCT 59.590 36.000 0.00 0.00 39.58 2.40
5942 7456 6.619874 GCCATTGCTCAACATTTGAAAATCTG 60.620 38.462 0.00 0.00 39.58 2.90
5943 7457 6.425721 CCATTGCTCAACATTTGAAAATCTGT 59.574 34.615 0.00 0.00 39.58 3.41
5944 7458 7.041644 CCATTGCTCAACATTTGAAAATCTGTT 60.042 33.333 0.00 0.00 39.58 3.16
5945 7459 7.467557 TTGCTCAACATTTGAAAATCTGTTC 57.532 32.000 0.00 0.00 39.58 3.18
5946 7460 6.571605 TGCTCAACATTTGAAAATCTGTTCA 58.428 32.000 0.00 0.00 39.58 3.18
5947 7461 7.040494 TGCTCAACATTTGAAAATCTGTTCAA 58.960 30.769 0.00 0.00 43.92 2.69
5948 7462 7.010367 TGCTCAACATTTGAAAATCTGTTCAAC 59.990 33.333 0.01 0.00 44.96 3.18
5949 7463 7.010367 GCTCAACATTTGAAAATCTGTTCAACA 59.990 33.333 0.01 0.00 44.96 3.33
5950 7464 8.183830 TCAACATTTGAAAATCTGTTCAACAC 57.816 30.769 0.01 0.00 44.96 3.32
5951 7465 7.277539 TCAACATTTGAAAATCTGTTCAACACC 59.722 33.333 0.01 0.00 44.96 4.16
5952 7466 5.748152 ACATTTGAAAATCTGTTCAACACCG 59.252 36.000 0.01 0.00 44.96 4.94
5953 7467 3.980646 TGAAAATCTGTTCAACACCGG 57.019 42.857 0.00 0.00 34.59 5.28
5954 7468 3.283751 TGAAAATCTGTTCAACACCGGT 58.716 40.909 0.00 0.00 34.59 5.28
5955 7469 3.314080 TGAAAATCTGTTCAACACCGGTC 59.686 43.478 2.59 0.00 34.59 4.79
5956 7470 2.631160 AATCTGTTCAACACCGGTCA 57.369 45.000 2.59 0.00 0.00 4.02
5957 7471 1.878953 ATCTGTTCAACACCGGTCAC 58.121 50.000 2.59 0.00 0.00 3.67
5958 7472 0.828022 TCTGTTCAACACCGGTCACT 59.172 50.000 2.59 0.00 0.00 3.41
5959 7473 2.033372 TCTGTTCAACACCGGTCACTA 58.967 47.619 2.59 0.00 0.00 2.74
5960 7474 2.035449 TCTGTTCAACACCGGTCACTAG 59.965 50.000 2.59 0.00 0.00 2.57
5961 7475 1.069513 TGTTCAACACCGGTCACTAGG 59.930 52.381 2.59 0.00 0.00 3.02
5962 7476 0.034337 TTCAACACCGGTCACTAGGC 59.966 55.000 2.59 0.00 0.00 3.93
5963 7477 0.830444 TCAACACCGGTCACTAGGCT 60.830 55.000 2.59 0.00 0.00 4.58
5964 7478 0.389948 CAACACCGGTCACTAGGCTC 60.390 60.000 2.59 0.00 0.00 4.70
5965 7479 1.874345 AACACCGGTCACTAGGCTCG 61.874 60.000 2.59 0.00 0.00 5.03
5966 7480 2.044555 CACCGGTCACTAGGCTCGA 61.045 63.158 2.59 0.00 0.00 4.04
5967 7481 2.045131 ACCGGTCACTAGGCTCGAC 61.045 63.158 0.00 0.00 0.00 4.20
5968 7482 2.044555 CCGGTCACTAGGCTCGACA 61.045 63.158 12.09 0.00 0.00 4.35
5969 7483 1.136984 CGGTCACTAGGCTCGACAC 59.863 63.158 12.09 0.30 0.00 3.67
5970 7484 1.306642 CGGTCACTAGGCTCGACACT 61.307 60.000 12.09 0.00 0.00 3.55
5971 7485 1.747709 GGTCACTAGGCTCGACACTA 58.252 55.000 12.09 0.00 0.00 2.74
5972 7486 1.671845 GGTCACTAGGCTCGACACTAG 59.328 57.143 14.14 14.14 41.83 2.57
5973 7487 1.671845 GTCACTAGGCTCGACACTAGG 59.328 57.143 18.03 10.20 40.71 3.02
5974 7488 1.281287 TCACTAGGCTCGACACTAGGT 59.719 52.381 18.03 6.03 40.71 3.08
5975 7489 2.093106 CACTAGGCTCGACACTAGGTT 58.907 52.381 18.03 1.54 40.71 3.50
5976 7490 2.093106 ACTAGGCTCGACACTAGGTTG 58.907 52.381 18.03 0.00 40.71 3.77
5977 7491 2.290768 ACTAGGCTCGACACTAGGTTGA 60.291 50.000 18.03 0.00 40.71 3.18
5990 7504 4.989168 CACTAGGTTGAGTGTTTACAGACC 59.011 45.833 0.00 0.00 41.67 3.85
5991 7505 4.652421 ACTAGGTTGAGTGTTTACAGACCA 59.348 41.667 0.00 0.00 0.00 4.02
5992 7506 4.073293 AGGTTGAGTGTTTACAGACCAG 57.927 45.455 0.00 0.00 0.00 4.00
5993 7507 3.709653 AGGTTGAGTGTTTACAGACCAGA 59.290 43.478 0.00 0.00 0.00 3.86
5994 7508 3.808174 GGTTGAGTGTTTACAGACCAGAC 59.192 47.826 0.00 0.00 0.00 3.51
5995 7509 4.439057 GTTGAGTGTTTACAGACCAGACA 58.561 43.478 0.00 0.00 0.00 3.41
5996 7510 4.054780 TGAGTGTTTACAGACCAGACAC 57.945 45.455 0.00 0.00 40.55 3.67
5998 7512 4.755266 AGTGTTTACAGACCAGACACTT 57.245 40.909 1.90 0.00 46.19 3.16
5999 7513 5.099042 AGTGTTTACAGACCAGACACTTT 57.901 39.130 1.90 0.00 46.19 2.66
6000 7514 5.497474 AGTGTTTACAGACCAGACACTTTT 58.503 37.500 1.90 0.00 46.19 2.27
6001 7515 6.646267 AGTGTTTACAGACCAGACACTTTTA 58.354 36.000 1.90 0.00 46.19 1.52
6002 7516 7.280356 AGTGTTTACAGACCAGACACTTTTAT 58.720 34.615 1.90 0.00 46.19 1.40
6003 7517 7.441458 AGTGTTTACAGACCAGACACTTTTATC 59.559 37.037 1.90 0.00 46.19 1.75
6004 7518 6.422701 TGTTTACAGACCAGACACTTTTATCG 59.577 38.462 0.00 0.00 0.00 2.92
6005 7519 3.926616 ACAGACCAGACACTTTTATCGG 58.073 45.455 0.00 0.00 0.00 4.18
6006 7520 3.323979 ACAGACCAGACACTTTTATCGGT 59.676 43.478 0.00 0.00 0.00 4.69
6007 7521 3.679980 CAGACCAGACACTTTTATCGGTG 59.320 47.826 0.00 0.00 39.13 4.94
6009 7523 3.399330 ACCAGACACTTTTATCGGTGTG 58.601 45.455 3.42 0.00 45.17 3.82
6010 7524 2.159627 CCAGACACTTTTATCGGTGTGC 59.840 50.000 3.42 0.00 45.17 4.57
6011 7525 2.805671 CAGACACTTTTATCGGTGTGCA 59.194 45.455 3.42 0.00 45.17 4.57
6012 7526 3.067106 AGACACTTTTATCGGTGTGCAG 58.933 45.455 3.42 0.00 45.17 4.41
6013 7527 1.535462 ACACTTTTATCGGTGTGCAGC 59.465 47.619 0.00 0.00 43.79 5.25
6014 7528 1.535028 CACTTTTATCGGTGTGCAGCA 59.465 47.619 0.00 0.00 0.00 4.41
6015 7529 1.535462 ACTTTTATCGGTGTGCAGCAC 59.465 47.619 19.37 19.37 46.97 4.40
6030 7544 8.459521 GTGTGCAGCACATTATTAATAACAAA 57.540 30.769 30.53 0.00 46.32 2.83
6031 7545 8.372521 GTGTGCAGCACATTATTAATAACAAAC 58.627 33.333 30.53 8.56 46.32 2.93
6032 7546 8.084684 TGTGCAGCACATTATTAATAACAAACA 58.915 29.630 24.84 0.00 39.62 2.83
6033 7547 9.086336 GTGCAGCACATTATTAATAACAAACAT 57.914 29.630 21.22 0.00 34.08 2.71
6048 7562 5.235305 ACAAACATAATCTTTGCTAGGCG 57.765 39.130 0.00 0.00 32.71 5.52
6049 7563 4.096382 ACAAACATAATCTTTGCTAGGCGG 59.904 41.667 0.00 0.00 32.71 6.13
6050 7564 2.222027 ACATAATCTTTGCTAGGCGGC 58.778 47.619 0.00 0.00 0.00 6.53
6051 7565 2.221169 CATAATCTTTGCTAGGCGGCA 58.779 47.619 13.08 4.23 40.74 5.69
6052 7566 1.953559 TAATCTTTGCTAGGCGGCAG 58.046 50.000 13.08 7.92 43.39 4.85
6053 7567 1.379642 AATCTTTGCTAGGCGGCAGC 61.380 55.000 20.90 20.90 43.39 5.25
6054 7568 2.541547 ATCTTTGCTAGGCGGCAGCA 62.542 55.000 24.60 24.60 46.96 4.41
6093 7607 4.069232 TCCGAAGCAGTGCCGGAG 62.069 66.667 25.66 10.23 46.17 4.63
6094 7608 4.379243 CCGAAGCAGTGCCGGAGT 62.379 66.667 23.58 0.00 45.58 3.85
6095 7609 2.811317 CGAAGCAGTGCCGGAGTC 60.811 66.667 12.58 0.98 0.00 3.36
6096 7610 2.435059 GAAGCAGTGCCGGAGTCC 60.435 66.667 12.58 0.00 0.00 3.85
6097 7611 3.959991 GAAGCAGTGCCGGAGTCCC 62.960 68.421 12.58 0.00 0.00 4.46
6099 7613 4.329545 GCAGTGCCGGAGTCCCAA 62.330 66.667 5.05 0.00 0.00 4.12
6100 7614 2.046892 CAGTGCCGGAGTCCCAAG 60.047 66.667 5.05 0.00 0.00 3.61
6101 7615 4.021925 AGTGCCGGAGTCCCAAGC 62.022 66.667 5.05 5.04 33.29 4.01
6102 7616 4.329545 GTGCCGGAGTCCCAAGCA 62.330 66.667 5.05 11.19 35.02 3.91
6103 7617 4.329545 TGCCGGAGTCCCAAGCAC 62.330 66.667 5.05 0.00 35.02 4.40
6104 7618 4.021925 GCCGGAGTCCCAAGCACT 62.022 66.667 5.05 0.00 33.01 4.40
6105 7619 2.266055 CCGGAGTCCCAAGCACTC 59.734 66.667 2.80 0.00 39.78 3.51
6109 7623 3.165606 GAGTCCCAAGCACTCCATG 57.834 57.895 0.00 0.00 35.19 3.66
6110 7624 0.393537 GAGTCCCAAGCACTCCATGG 60.394 60.000 4.97 4.97 35.19 3.66
6114 7628 3.602104 CCAAGCACTCCATGGGAAT 57.398 52.632 13.02 0.00 0.00 3.01
6115 7629 1.108776 CCAAGCACTCCATGGGAATG 58.891 55.000 13.02 9.08 31.47 2.67
6127 7641 3.530067 GGAATGCCCATGCTCCAC 58.470 61.111 0.00 0.00 38.71 4.02
6128 7642 2.129785 GGAATGCCCATGCTCCACC 61.130 63.158 0.00 0.00 38.71 4.61
6129 7643 2.440796 AATGCCCATGCTCCACCG 60.441 61.111 0.00 0.00 38.71 4.94
6130 7644 3.286694 AATGCCCATGCTCCACCGT 62.287 57.895 0.00 0.00 38.71 4.83
6131 7645 2.786512 AATGCCCATGCTCCACCGTT 62.787 55.000 0.00 0.00 38.71 4.44
6132 7646 2.676471 GCCCATGCTCCACCGTTT 60.676 61.111 0.00 0.00 33.53 3.60
6133 7647 1.377987 GCCCATGCTCCACCGTTTA 60.378 57.895 0.00 0.00 33.53 2.01
6134 7648 1.654023 GCCCATGCTCCACCGTTTAC 61.654 60.000 0.00 0.00 33.53 2.01
6135 7649 1.366111 CCCATGCTCCACCGTTTACG 61.366 60.000 0.00 0.00 39.44 3.18
6136 7650 1.423845 CATGCTCCACCGTTTACGC 59.576 57.895 0.00 0.00 38.18 4.42
6137 7651 1.004320 ATGCTCCACCGTTTACGCA 60.004 52.632 0.00 0.00 38.18 5.24
6138 7652 0.604243 ATGCTCCACCGTTTACGCAA 60.604 50.000 0.00 0.00 38.18 4.85
6139 7653 1.205820 GCTCCACCGTTTACGCAAC 59.794 57.895 0.00 0.00 38.18 4.17
6140 7654 1.864176 CTCCACCGTTTACGCAACC 59.136 57.895 0.00 0.00 38.18 3.77
6141 7655 1.893168 CTCCACCGTTTACGCAACCG 61.893 60.000 0.00 0.00 38.18 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.276201 TGTTTAGATGGGATTCACGCG 58.724 47.619 3.53 3.53 0.00 6.01
1 2 3.689649 AGTTGTTTAGATGGGATTCACGC 59.310 43.478 0.00 0.00 0.00 5.34
17 18 3.815401 GGTGTCACATGAAGCTAGTTGTT 59.185 43.478 5.12 0.00 0.00 2.83
19 20 2.744202 GGGTGTCACATGAAGCTAGTTG 59.256 50.000 5.12 0.00 0.00 3.16
21 22 1.279271 GGGGTGTCACATGAAGCTAGT 59.721 52.381 5.12 0.00 0.00 2.57
67 68 2.045926 CCTTGCCCCAACTCTCGG 60.046 66.667 0.00 0.00 0.00 4.63
81 82 3.637273 GTCACCCTCACCCGCCTT 61.637 66.667 0.00 0.00 0.00 4.35
99 104 2.450476 GCCTCCTTTCATCACCACATT 58.550 47.619 0.00 0.00 0.00 2.71
113 118 1.056700 AGCCCAATACATCGCCTCCT 61.057 55.000 0.00 0.00 0.00 3.69
124 129 1.064017 AGCCGGATTTGAAGCCCAATA 60.064 47.619 5.05 0.00 34.23 1.90
153 158 2.092914 CACCCACTTAGATCCCCTTCAC 60.093 54.545 0.00 0.00 0.00 3.18
166 171 0.763223 AACCCTCGACTCACCCACTT 60.763 55.000 0.00 0.00 0.00 3.16
209 214 0.101399 CTGATCGGTTCCTCCACTCG 59.899 60.000 0.00 0.00 35.57 4.18
211 216 1.006043 TCTCTGATCGGTTCCTCCACT 59.994 52.381 0.42 0.00 35.57 4.00
223 228 1.339610 CGATCCACCCAGTCTCTGATC 59.660 57.143 0.00 0.00 32.44 2.92
234 239 0.318762 GCTCCTATGTCGATCCACCC 59.681 60.000 0.00 0.00 0.00 4.61
237 242 1.332195 CTGGCTCCTATGTCGATCCA 58.668 55.000 0.00 0.00 0.00 3.41
246 251 1.152139 GCTCCCTCCTGGCTCCTAT 60.152 63.158 0.00 0.00 0.00 2.57
267 272 3.841255 TCTTCTTCTTCTTCCTCCCTTCC 59.159 47.826 0.00 0.00 0.00 3.46
271 276 5.247337 TCTTCTTCTTCTTCTTCTTCCTCCC 59.753 44.000 0.00 0.00 0.00 4.30
274 279 7.071824 TCCTTTCTTCTTCTTCTTCTTCTTCCT 59.928 37.037 0.00 0.00 0.00 3.36
275 280 7.220740 TCCTTTCTTCTTCTTCTTCTTCTTCC 58.779 38.462 0.00 0.00 0.00 3.46
277 282 8.490311 TCTTCCTTTCTTCTTCTTCTTCTTCTT 58.510 33.333 0.00 0.00 0.00 2.52
278 283 8.028652 TCTTCCTTTCTTCTTCTTCTTCTTCT 57.971 34.615 0.00 0.00 0.00 2.85
279 284 8.669946 TTCTTCCTTTCTTCTTCTTCTTCTTC 57.330 34.615 0.00 0.00 0.00 2.87
280 285 7.719193 CCTTCTTCCTTTCTTCTTCTTCTTCTT 59.281 37.037 0.00 0.00 0.00 2.52
281 286 7.147391 ACCTTCTTCCTTTCTTCTTCTTCTTCT 60.147 37.037 0.00 0.00 0.00 2.85
282 287 6.995686 ACCTTCTTCCTTTCTTCTTCTTCTTC 59.004 38.462 0.00 0.00 0.00 2.87
283 288 6.770303 CACCTTCTTCCTTTCTTCTTCTTCTT 59.230 38.462 0.00 0.00 0.00 2.52
284 289 6.100424 TCACCTTCTTCCTTTCTTCTTCTTCT 59.900 38.462 0.00 0.00 0.00 2.85
285 290 6.292150 TCACCTTCTTCCTTTCTTCTTCTTC 58.708 40.000 0.00 0.00 0.00 2.87
286 291 6.253946 TCACCTTCTTCCTTTCTTCTTCTT 57.746 37.500 0.00 0.00 0.00 2.52
287 292 5.896073 TCACCTTCTTCCTTTCTTCTTCT 57.104 39.130 0.00 0.00 0.00 2.85
302 307 1.841450 GACGGATGTCGATCACCTTC 58.159 55.000 0.00 0.00 42.43 3.46
335 341 3.553511 GGCTTCAGTGAAGACATATGACG 59.446 47.826 32.39 7.02 46.15 4.35
350 356 2.775911 TGAGATGGTGAAGGCTTCAG 57.224 50.000 29.22 0.00 41.01 3.02
408 414 4.317444 CGTGGGCCCGTGGTGTTA 62.317 66.667 19.37 0.00 0.00 2.41
429 435 0.890542 GCAGTGGTGGCTTGATGACA 60.891 55.000 0.00 0.00 0.00 3.58
439 445 1.453155 GTTGATGGTAGCAGTGGTGG 58.547 55.000 4.76 0.00 0.00 4.61
446 452 0.682292 TGGTGACGTTGATGGTAGCA 59.318 50.000 0.00 0.00 0.00 3.49
458 464 1.667830 AACAGCGATGGTGGTGACG 60.668 57.895 5.32 0.00 39.68 4.35
554 568 1.068588 TCTCACTCAAGACCACGTTGG 59.931 52.381 2.92 2.92 45.02 3.77
556 570 4.079970 TCTATCTCACTCAAGACCACGTT 58.920 43.478 0.00 0.00 0.00 3.99
557 571 3.687125 TCTATCTCACTCAAGACCACGT 58.313 45.455 0.00 0.00 0.00 4.49
579 593 6.820335 TGGATCTCATTTGTCAACGAGATAT 58.180 36.000 19.64 6.77 43.52 1.63
580 594 6.220726 TGGATCTCATTTGTCAACGAGATA 57.779 37.500 19.64 8.61 43.52 1.98
581 595 5.089970 TGGATCTCATTTGTCAACGAGAT 57.910 39.130 19.68 19.68 45.57 2.75
582 596 4.535526 TGGATCTCATTTGTCAACGAGA 57.464 40.909 13.64 13.64 38.78 4.04
583 597 6.481313 ACATATGGATCTCATTTGTCAACGAG 59.519 38.462 7.80 5.24 41.86 4.18
584 598 6.348498 ACATATGGATCTCATTTGTCAACGA 58.652 36.000 7.80 0.00 41.86 3.85
585 599 6.609237 ACATATGGATCTCATTTGTCAACG 57.391 37.500 7.80 0.00 41.86 4.10
590 604 7.228108 GTGACATGACATATGGATCTCATTTGT 59.772 37.037 15.07 15.07 45.98 2.83
591 605 7.227910 TGTGACATGACATATGGATCTCATTTG 59.772 37.037 7.80 10.72 39.61 2.32
592 606 7.228108 GTGTGACATGACATATGGATCTCATTT 59.772 37.037 7.80 0.32 37.30 2.32
593 607 6.709397 GTGTGACATGACATATGGATCTCATT 59.291 38.462 7.80 0.00 37.30 2.57
594 608 6.183361 TGTGTGACATGACATATGGATCTCAT 60.183 38.462 7.80 4.28 39.78 2.90
595 609 5.129155 TGTGTGACATGACATATGGATCTCA 59.871 40.000 7.80 1.85 0.00 3.27
596 610 5.604565 TGTGTGACATGACATATGGATCTC 58.395 41.667 7.80 0.00 0.00 2.75
597 611 5.619132 TGTGTGACATGACATATGGATCT 57.381 39.130 7.80 0.00 0.00 2.75
690 705 6.205464 CCATGCCTAAAATCTGACGTCATATT 59.795 38.462 20.40 20.17 0.00 1.28
715 730 6.030379 TGTCATGAAAAACGTTTGATTTGC 57.970 33.333 15.46 0.00 0.00 3.68
726 741 9.885743 GCGTCAATATAAATTGTCATGAAAAAC 57.114 29.630 1.55 0.00 42.66 2.43
746 761 2.355837 GTGCCAGACTCGCGTCAA 60.356 61.111 5.77 0.00 42.73 3.18
779 794 4.259292 CGTTCAGTTTACTTAGCGAATCCG 60.259 45.833 0.00 0.00 39.16 4.18
791 806 5.730269 TGACAAATCGAACGTTCAGTTTAC 58.270 37.500 26.71 19.83 44.35 2.01
829 844 7.230849 TGTCAGATTTTTAGGCATGTCAAAT 57.769 32.000 0.00 0.00 0.00 2.32
911 926 2.797177 AAATCTCACCAGGGCTCTTC 57.203 50.000 0.00 0.00 0.00 2.87
1214 1234 1.079127 CGGTTGGAATCTGGCGAGT 60.079 57.895 0.00 0.00 0.00 4.18
1215 1235 0.673644 AACGGTTGGAATCTGGCGAG 60.674 55.000 0.00 0.00 0.00 5.03
1216 1236 0.672401 GAACGGTTGGAATCTGGCGA 60.672 55.000 0.00 0.00 0.00 5.54
1372 1394 0.977395 AAAGGAGTCCGAGTTCCAGG 59.023 55.000 2.76 0.00 35.88 4.45
1375 1397 0.974383 TCCAAAGGAGTCCGAGTTCC 59.026 55.000 2.76 0.00 0.00 3.62
1383 1405 2.155279 GCCTCAAAGTCCAAAGGAGTC 58.845 52.381 0.00 0.00 33.71 3.36
1410 1432 3.181967 GTGCCTAGCGCGTGTCAG 61.182 66.667 8.43 0.00 42.08 3.51
1411 1433 3.626680 GAGTGCCTAGCGCGTGTCA 62.627 63.158 8.43 0.00 44.45 3.58
1412 1434 2.881352 GAGTGCCTAGCGCGTGTC 60.881 66.667 8.43 0.00 44.45 3.67
1413 1435 2.890847 GATGAGTGCCTAGCGCGTGT 62.891 60.000 8.43 0.00 44.45 4.49
1414 1436 2.202797 ATGAGTGCCTAGCGCGTG 60.203 61.111 8.43 0.00 44.45 5.34
1415 1437 2.105128 GATGAGTGCCTAGCGCGT 59.895 61.111 8.43 0.00 44.45 6.01
1416 1438 1.948138 CTGATGAGTGCCTAGCGCG 60.948 63.158 0.00 0.00 44.45 6.86
1417 1439 0.873743 GTCTGATGAGTGCCTAGCGC 60.874 60.000 0.00 0.00 39.59 5.92
1418 1440 0.743688 AGTCTGATGAGTGCCTAGCG 59.256 55.000 0.00 0.00 0.00 4.26
1475 1527 1.409790 TGCTTGCTTGTGAATTGCAGT 59.590 42.857 0.00 0.00 38.01 4.40
1571 1623 4.219944 AGCGTTATGAGGTTACAGAGACAA 59.780 41.667 0.00 0.00 0.00 3.18
1579 1636 4.051922 CAGATCCAGCGTTATGAGGTTAC 58.948 47.826 0.00 0.00 0.00 2.50
1584 1641 2.101415 TCCACAGATCCAGCGTTATGAG 59.899 50.000 0.00 0.00 0.00 2.90
1608 1665 6.470235 GCAAACTATAATGTCATGTGCAGAAC 59.530 38.462 0.00 0.00 0.00 3.01
1621 1678 8.551205 AGATTATGTCGTGTGCAAACTATAATG 58.449 33.333 18.14 0.01 0.00 1.90
1622 1679 8.551205 CAGATTATGTCGTGTGCAAACTATAAT 58.449 33.333 15.28 15.28 0.00 1.28
1626 1683 5.120053 CACAGATTATGTCGTGTGCAAACTA 59.880 40.000 5.28 0.00 41.41 2.24
1772 1867 4.813750 TGCTACTGTAAAGGGGAGTTAC 57.186 45.455 0.00 0.00 33.00 2.50
1806 1901 1.632589 AGCTTTGGTGGTTTCCATCC 58.367 50.000 0.00 0.00 32.79 3.51
1809 1904 3.769844 TGTAAAAGCTTTGGTGGTTTCCA 59.230 39.130 13.54 0.00 36.75 3.53
1846 1941 7.786114 TGTAAACATTACCGAAAAGTAGAACG 58.214 34.615 0.00 0.00 0.00 3.95
1942 2070 5.812652 TGTTTTAAACTTGCACTCGGTTAG 58.187 37.500 9.33 0.00 0.00 2.34
1952 2080 7.692908 TGAGCACTTAATGTTTTAAACTTGC 57.307 32.000 9.33 7.82 32.72 4.01
1978 2106 9.998106 TGCTAGTATAATGACTTCCCTAATTTC 57.002 33.333 0.00 0.00 0.00 2.17
1992 2120 8.742554 TGTTATGTCGACATGCTAGTATAATG 57.257 34.615 35.46 0.00 37.15 1.90
2043 2179 1.328439 CAAGAGGTTCGTTCGTCTCG 58.672 55.000 5.63 0.00 32.48 4.04
2057 2193 7.092716 AGGCACATTAAAATTGTAAGCAAGAG 58.907 34.615 0.00 0.00 38.10 2.85
2163 2334 7.888250 TCATATAGAGCAGAAAGACAGAGAA 57.112 36.000 0.00 0.00 0.00 2.87
2227 2398 1.163420 TGAGGCGATTTTGTGTGCGT 61.163 50.000 0.00 0.00 0.00 5.24
2240 2411 0.107993 ACATGTGATGTCCTGAGGCG 60.108 55.000 0.00 0.00 39.92 5.52
2313 2484 4.641989 AGCATAAACATGACATTGACTCCC 59.358 41.667 0.00 0.00 0.00 4.30
2329 2500 2.150390 TGCGCAGAAACAGAGCATAAA 58.850 42.857 5.66 0.00 36.88 1.40
2380 2551 9.811995 AAACCCTACATAAAAGTTTTTCTCAAC 57.188 29.630 6.10 0.00 0.00 3.18
2526 2708 2.029828 ACGTTGATCACACTCTCAGGAC 60.030 50.000 0.00 0.00 0.00 3.85
2544 2726 3.484407 AGTACTGTTAGTCCTGACACGT 58.516 45.455 0.00 0.00 0.00 4.49
2590 2772 7.987458 CACAGTAGATTTTTATAAGGGAGAGCA 59.013 37.037 0.00 0.00 0.00 4.26
2868 3050 3.568007 TGTCGAAGTTCTTTTCCATTGGG 59.432 43.478 2.09 0.00 0.00 4.12
2873 3055 3.830744 TCCTGTCGAAGTTCTTTTCCA 57.169 42.857 0.56 0.00 0.00 3.53
3006 3188 5.976458 TGGCCTTGCTAATTTTTAGAATGG 58.024 37.500 3.32 1.52 0.00 3.16
3161 3343 6.183360 CCACATTACTCCGTACCCATTTTTAC 60.183 42.308 0.00 0.00 0.00 2.01
3340 3525 5.649557 CCGATTCATGCAAATAAAAGGTCA 58.350 37.500 0.00 0.00 0.00 4.02
3353 3538 0.382873 TGCAATGAGCCGATTCATGC 59.617 50.000 2.94 8.56 44.83 4.06
3362 3547 0.457853 CACACATGCTGCAATGAGCC 60.458 55.000 20.19 0.00 44.83 4.70
3389 3574 4.094887 GCTGATATCTCAAAGCACGGAAAA 59.905 41.667 3.98 0.00 0.00 2.29
3432 3617 0.911769 ATTTCTGCGATGGACAGGGA 59.088 50.000 0.00 0.00 35.78 4.20
3567 3756 7.815068 AGCACTACGAATATAGCAAAATAGAGG 59.185 37.037 0.00 0.00 0.00 3.69
3568 3757 8.749841 AGCACTACGAATATAGCAAAATAGAG 57.250 34.615 0.00 0.00 0.00 2.43
3569 3758 8.577296 AGAGCACTACGAATATAGCAAAATAGA 58.423 33.333 0.00 0.00 0.00 1.98
3570 3759 8.749841 AGAGCACTACGAATATAGCAAAATAG 57.250 34.615 0.00 0.00 0.00 1.73
3586 3775 6.400515 GCATAGCAATCGAATAAGAGCACTAC 60.401 42.308 0.00 0.00 0.00 2.73
3680 3873 7.139392 TCACTGTTAGACGATATATCAGCAAC 58.861 38.462 13.11 10.35 0.00 4.17
3696 3889 4.248859 CTGTGTCCCAGAATCACTGTTAG 58.751 47.826 0.00 0.00 44.49 2.34
3762 3955 5.763876 AGCCAAAGAAACAGAGGTAGTAT 57.236 39.130 0.00 0.00 0.00 2.12
3818 4011 6.381133 ACTGATTAATTGGATGAGTTTTCCCC 59.619 38.462 0.00 0.00 31.87 4.81
4091 4284 7.945033 TTTCATTTAGAAGAATGCCACAAAC 57.055 32.000 0.00 0.00 37.57 2.93
4336 4532 5.241662 GGCTTAATAGAGCTCAATACTGGG 58.758 45.833 17.77 0.13 42.32 4.45
4337 4533 5.241662 GGGCTTAATAGAGCTCAATACTGG 58.758 45.833 17.77 1.50 42.81 4.00
4345 4541 3.750652 GCAATCTGGGCTTAATAGAGCTC 59.249 47.826 5.27 5.27 43.60 4.09
4346 4542 3.137176 TGCAATCTGGGCTTAATAGAGCT 59.863 43.478 0.00 0.00 42.32 4.09
4347 4543 3.480470 TGCAATCTGGGCTTAATAGAGC 58.520 45.455 0.00 0.00 41.96 4.09
4348 4544 6.939163 AGTAATGCAATCTGGGCTTAATAGAG 59.061 38.462 0.00 0.00 0.00 2.43
4349 4545 6.712095 CAGTAATGCAATCTGGGCTTAATAGA 59.288 38.462 0.00 0.00 0.00 1.98
4350 4546 6.569226 GCAGTAATGCAATCTGGGCTTAATAG 60.569 42.308 10.86 0.00 34.41 1.73
4351 4547 5.241506 GCAGTAATGCAATCTGGGCTTAATA 59.758 40.000 10.86 0.00 34.41 0.98
4352 4548 4.038402 GCAGTAATGCAATCTGGGCTTAAT 59.962 41.667 10.86 0.00 34.41 1.40
4371 4567 3.440173 CCATTCGTAGAAACCAATGCAGT 59.560 43.478 0.00 0.00 45.90 4.40
4458 4657 4.082571 GCCTAGCTGAAAAGATTTGCTTGA 60.083 41.667 0.00 0.00 36.80 3.02
4509 4708 7.201266 GCACATGAAATTTCACTTGTTACGATC 60.201 37.037 22.71 5.20 40.49 3.69
4517 4716 4.149922 CAGCTGCACATGAAATTTCACTTG 59.850 41.667 22.71 20.94 40.49 3.16
4601 4800 9.617523 TGAATTTGAGAATTATATGACTCAGCA 57.382 29.630 0.00 0.00 39.86 4.41
4862 5062 2.033675 TGAAGTACGTGAGCAGACGAAA 59.966 45.455 13.74 0.00 42.10 3.46
4865 5065 1.069159 AGTGAAGTACGTGAGCAGACG 60.069 52.381 0.00 6.02 45.09 4.18
4910 5110 9.581289 TCCTTCAACTCTGTTGGAATATTTAAA 57.419 29.630 10.05 0.00 0.00 1.52
5002 5202 3.603532 TCATGACATCAGAGCCTTTGAC 58.396 45.455 0.00 0.00 0.00 3.18
5003 5203 3.986996 TCATGACATCAGAGCCTTTGA 57.013 42.857 0.00 0.00 0.00 2.69
5007 5207 2.570752 AGTGTTCATGACATCAGAGCCT 59.429 45.455 0.00 0.00 41.10 4.58
5020 5220 6.407202 GTGTAGAATAGGACCAAGTGTTCAT 58.593 40.000 0.00 0.00 0.00 2.57
5021 5221 5.279809 GGTGTAGAATAGGACCAAGTGTTCA 60.280 44.000 0.00 0.00 0.00 3.18
5038 5238 6.533730 ACAAACATCTTGAATCTGGTGTAGA 58.466 36.000 0.00 0.00 40.37 2.59
5093 5293 6.701400 GGCAAAACTATGAAATCAAACACTGT 59.299 34.615 0.00 0.00 0.00 3.55
5195 5395 5.422012 CCAAGAAAATAACAGGGCTACCATT 59.578 40.000 0.00 0.00 40.13 3.16
5215 5415 9.643693 ACAGAAATAATTACATTGCTTTCCAAG 57.356 29.630 4.22 0.00 36.76 3.61
5233 5435 5.622346 ACCCAAAAAGGCAAACAGAAATA 57.378 34.783 0.00 0.00 35.39 1.40
5234 5436 4.502105 ACCCAAAAAGGCAAACAGAAAT 57.498 36.364 0.00 0.00 35.39 2.17
5245 5447 5.186797 TCCAATAACAGCATACCCAAAAAGG 59.813 40.000 0.00 0.00 37.03 3.11
5287 5489 3.338249 ACACCAATGAGTCTGTACATGC 58.662 45.455 0.00 0.00 0.00 4.06
5303 5505 4.431416 AAAAGTATCCACTGTGACACCA 57.569 40.909 9.86 0.00 34.36 4.17
5389 5591 5.405571 CCAGATGTACGATACCTGTTAATGC 59.594 44.000 0.00 0.00 0.00 3.56
5396 5598 3.256879 AGCATCCAGATGTACGATACCTG 59.743 47.826 9.29 0.00 40.80 4.00
5402 5604 2.294512 CTGCTAGCATCCAGATGTACGA 59.705 50.000 19.72 0.00 40.80 3.43
5455 5657 2.304761 ACCAAGTCCCAGATAAGCGAAA 59.695 45.455 0.00 0.00 0.00 3.46
5493 5695 9.871238 AAATAGTATAACAAGTAGTGTGTGAGG 57.129 33.333 0.00 0.00 40.60 3.86
5534 7048 1.835483 CTTGACCACAGACTGCACGC 61.835 60.000 1.25 0.00 0.00 5.34
5540 7054 2.551721 CCAGCAATCTTGACCACAGACT 60.552 50.000 0.00 0.00 0.00 3.24
5544 7058 0.251297 CCCCAGCAATCTTGACCACA 60.251 55.000 0.00 0.00 0.00 4.17
5552 7066 1.687368 GCCTCATTTCCCCAGCAATCT 60.687 52.381 0.00 0.00 0.00 2.40
5563 7077 1.064654 GAAGTCATGCCGCCTCATTTC 59.935 52.381 0.00 0.00 0.00 2.17
5569 7083 2.434884 CGTGAAGTCATGCCGCCT 60.435 61.111 0.00 0.00 0.00 5.52
5594 7108 8.408043 TCTAACAAATCAATCAGGTGAACATT 57.592 30.769 0.00 0.00 0.00 2.71
5640 7154 4.271687 GTGCCTATAAAGACGCAATTTCG 58.728 43.478 0.00 0.00 32.04 3.46
5735 7249 1.153086 CCCCTCCCTCAATTGCTCG 60.153 63.158 0.00 0.00 0.00 5.03
5757 7271 1.535204 CCTTGCCCTGCATCCGTTTT 61.535 55.000 0.00 0.00 38.76 2.43
5802 7316 2.621526 GCTTCTAGTCTAGGCTCTGACC 59.378 54.545 0.00 0.00 34.02 4.02
5812 7326 6.591750 ACAGCTAAACTTGCTTCTAGTCTA 57.408 37.500 0.00 0.00 38.92 2.59
5862 7376 1.895707 ACCGTCGGAGAGTTCGTGT 60.896 57.895 20.51 0.00 36.95 4.49
5863 7377 1.442184 CACCGTCGGAGAGTTCGTG 60.442 63.158 20.51 0.00 36.95 4.35
5864 7378 1.450531 AACACCGTCGGAGAGTTCGT 61.451 55.000 20.51 0.14 36.95 3.85
5865 7379 1.002250 CAACACCGTCGGAGAGTTCG 61.002 60.000 20.51 10.12 36.95 3.95
5866 7380 1.282930 GCAACACCGTCGGAGAGTTC 61.283 60.000 20.51 9.60 36.95 3.01
5867 7381 1.300697 GCAACACCGTCGGAGAGTT 60.301 57.895 20.51 15.90 36.95 3.01
5868 7382 2.338984 GCAACACCGTCGGAGAGT 59.661 61.111 20.51 10.54 36.95 3.24
5869 7383 2.432628 GGCAACACCGTCGGAGAG 60.433 66.667 20.51 9.86 36.95 3.20
5870 7384 2.915659 AGGCAACACCGTCGGAGA 60.916 61.111 20.51 0.00 46.52 3.71
5871 7385 2.432628 GAGGCAACACCGTCGGAG 60.433 66.667 20.51 13.51 46.52 4.63
5872 7386 1.180456 TAAGAGGCAACACCGTCGGA 61.180 55.000 20.51 0.00 46.52 4.55
5873 7387 0.736325 CTAAGAGGCAACACCGTCGG 60.736 60.000 10.48 10.48 46.52 4.79
5874 7388 1.352156 GCTAAGAGGCAACACCGTCG 61.352 60.000 0.00 0.00 46.52 5.12
5875 7389 1.019805 GGCTAAGAGGCAACACCGTC 61.020 60.000 0.00 0.00 46.52 4.79
5876 7390 1.003718 GGCTAAGAGGCAACACCGT 60.004 57.895 0.00 0.00 46.52 4.83
5877 7391 0.741221 GAGGCTAAGAGGCAACACCG 60.741 60.000 2.66 0.00 46.52 4.94
5878 7392 0.393132 GGAGGCTAAGAGGCAACACC 60.393 60.000 2.66 0.00 44.19 4.16
5879 7393 0.324943 TGGAGGCTAAGAGGCAACAC 59.675 55.000 2.66 0.00 44.19 3.32
5880 7394 1.289160 ATGGAGGCTAAGAGGCAACA 58.711 50.000 2.66 1.47 44.19 3.33
5881 7395 3.778954 ATATGGAGGCTAAGAGGCAAC 57.221 47.619 2.66 0.00 44.19 4.17
5882 7396 3.748668 GCAATATGGAGGCTAAGAGGCAA 60.749 47.826 2.66 0.00 44.19 4.52
5883 7397 2.224621 GCAATATGGAGGCTAAGAGGCA 60.225 50.000 2.66 0.00 44.19 4.75
5884 7398 2.224621 TGCAATATGGAGGCTAAGAGGC 60.225 50.000 0.00 0.00 41.73 4.70
5885 7399 3.326006 TCTGCAATATGGAGGCTAAGAGG 59.674 47.826 0.00 0.00 36.40 3.69
5886 7400 4.613925 TCTGCAATATGGAGGCTAAGAG 57.386 45.455 0.00 0.00 36.40 2.85
5887 7401 5.104360 AGTTTCTGCAATATGGAGGCTAAGA 60.104 40.000 0.00 0.00 36.40 2.10
5888 7402 5.128919 AGTTTCTGCAATATGGAGGCTAAG 58.871 41.667 0.00 0.00 36.40 2.18
5889 7403 5.116084 AGTTTCTGCAATATGGAGGCTAA 57.884 39.130 0.00 0.00 36.40 3.09
5890 7404 4.778213 AGTTTCTGCAATATGGAGGCTA 57.222 40.909 0.00 0.00 36.40 3.93
5891 7405 3.659183 AGTTTCTGCAATATGGAGGCT 57.341 42.857 0.00 0.00 36.40 4.58
5892 7406 4.455606 AGTAGTTTCTGCAATATGGAGGC 58.544 43.478 0.00 0.00 36.40 4.70
5893 7407 5.235186 CGAAGTAGTTTCTGCAATATGGAGG 59.765 44.000 0.00 0.00 36.40 4.30
5894 7408 5.277058 GCGAAGTAGTTTCTGCAATATGGAG 60.277 44.000 0.00 0.00 37.15 3.86
5895 7409 4.570772 GCGAAGTAGTTTCTGCAATATGGA 59.429 41.667 0.00 0.00 36.23 3.41
5896 7410 4.260784 GGCGAAGTAGTTTCTGCAATATGG 60.261 45.833 0.00 0.00 37.19 2.74
5897 7411 4.332543 TGGCGAAGTAGTTTCTGCAATATG 59.667 41.667 0.00 0.00 37.19 1.78
5898 7412 4.513442 TGGCGAAGTAGTTTCTGCAATAT 58.487 39.130 0.00 0.00 37.19 1.28
5899 7413 3.932822 TGGCGAAGTAGTTTCTGCAATA 58.067 40.909 0.00 0.00 37.19 1.90
5900 7414 2.778299 TGGCGAAGTAGTTTCTGCAAT 58.222 42.857 0.00 0.00 37.19 3.56
5901 7415 2.248280 TGGCGAAGTAGTTTCTGCAA 57.752 45.000 0.00 0.00 37.19 4.08
5902 7416 2.472695 ATGGCGAAGTAGTTTCTGCA 57.527 45.000 0.00 0.00 37.19 4.41
5903 7417 2.729156 GCAATGGCGAAGTAGTTTCTGC 60.729 50.000 0.00 0.00 35.79 4.26
5904 7418 3.122937 GCAATGGCGAAGTAGTTTCTG 57.877 47.619 0.00 0.00 33.44 3.02
5917 7431 5.410439 AGATTTTCAAATGTTGAGCAATGGC 59.590 36.000 0.00 0.00 41.38 4.40
5918 7432 6.425721 ACAGATTTTCAAATGTTGAGCAATGG 59.574 34.615 0.00 0.53 41.38 3.16
5919 7433 7.416154 ACAGATTTTCAAATGTTGAGCAATG 57.584 32.000 0.00 0.00 41.38 2.82
5920 7434 7.711772 TGAACAGATTTTCAAATGTTGAGCAAT 59.288 29.630 0.00 0.00 41.38 3.56
5921 7435 7.040494 TGAACAGATTTTCAAATGTTGAGCAA 58.960 30.769 0.00 0.00 41.38 3.91
5922 7436 6.571605 TGAACAGATTTTCAAATGTTGAGCA 58.428 32.000 0.00 0.00 41.38 4.26
5923 7437 7.010367 TGTTGAACAGATTTTCAAATGTTGAGC 59.990 33.333 0.00 0.00 44.96 4.26
5924 7438 8.323140 GTGTTGAACAGATTTTCAAATGTTGAG 58.677 33.333 0.00 0.00 44.96 3.02
5925 7439 7.277539 GGTGTTGAACAGATTTTCAAATGTTGA 59.722 33.333 0.00 0.00 44.96 3.18
5926 7440 7.401080 GGTGTTGAACAGATTTTCAAATGTTG 58.599 34.615 0.00 0.00 44.96 3.33
5927 7441 6.255453 CGGTGTTGAACAGATTTTCAAATGTT 59.745 34.615 0.00 0.00 44.96 2.71
5928 7442 5.748152 CGGTGTTGAACAGATTTTCAAATGT 59.252 36.000 0.00 0.00 44.96 2.71
5929 7443 5.175491 CCGGTGTTGAACAGATTTTCAAATG 59.825 40.000 0.00 0.00 44.96 2.32
5930 7444 5.163457 ACCGGTGTTGAACAGATTTTCAAAT 60.163 36.000 6.12 0.00 44.96 2.32
5931 7445 4.158764 ACCGGTGTTGAACAGATTTTCAAA 59.841 37.500 6.12 0.00 44.96 2.69
5932 7446 3.697045 ACCGGTGTTGAACAGATTTTCAA 59.303 39.130 6.12 0.00 42.04 2.69
5933 7447 3.283751 ACCGGTGTTGAACAGATTTTCA 58.716 40.909 6.12 0.00 33.55 2.69
5934 7448 3.314080 TGACCGGTGTTGAACAGATTTTC 59.686 43.478 14.63 0.00 0.00 2.29
5935 7449 3.066203 GTGACCGGTGTTGAACAGATTTT 59.934 43.478 14.63 0.00 0.00 1.82
5936 7450 2.616842 GTGACCGGTGTTGAACAGATTT 59.383 45.455 14.63 0.00 0.00 2.17
5937 7451 2.158813 AGTGACCGGTGTTGAACAGATT 60.159 45.455 14.63 0.00 0.00 2.40
5938 7452 1.416401 AGTGACCGGTGTTGAACAGAT 59.584 47.619 14.63 0.00 0.00 2.90
5939 7453 0.828022 AGTGACCGGTGTTGAACAGA 59.172 50.000 14.63 0.00 0.00 3.41
5940 7454 2.404215 CTAGTGACCGGTGTTGAACAG 58.596 52.381 14.63 0.00 0.00 3.16
5941 7455 1.069513 CCTAGTGACCGGTGTTGAACA 59.930 52.381 14.63 0.00 0.00 3.18
5942 7456 1.792006 CCTAGTGACCGGTGTTGAAC 58.208 55.000 14.63 1.93 0.00 3.18
5943 7457 0.034337 GCCTAGTGACCGGTGTTGAA 59.966 55.000 14.63 0.00 0.00 2.69
5944 7458 0.830444 AGCCTAGTGACCGGTGTTGA 60.830 55.000 14.63 0.00 0.00 3.18
5945 7459 0.389948 GAGCCTAGTGACCGGTGTTG 60.390 60.000 14.63 0.00 0.00 3.33
5946 7460 1.874345 CGAGCCTAGTGACCGGTGTT 61.874 60.000 14.63 0.00 0.00 3.32
5947 7461 2.341101 CGAGCCTAGTGACCGGTGT 61.341 63.158 14.63 0.00 0.00 4.16
5948 7462 2.044555 TCGAGCCTAGTGACCGGTG 61.045 63.158 14.63 0.00 0.00 4.94
5949 7463 2.045131 GTCGAGCCTAGTGACCGGT 61.045 63.158 6.92 6.92 0.00 5.28
5950 7464 2.044555 TGTCGAGCCTAGTGACCGG 61.045 63.158 0.00 0.00 0.00 5.28
5951 7465 1.136984 GTGTCGAGCCTAGTGACCG 59.863 63.158 0.00 0.00 0.00 4.79
5952 7466 1.671845 CTAGTGTCGAGCCTAGTGACC 59.328 57.143 9.24 0.00 0.00 4.02
5953 7467 1.671845 CCTAGTGTCGAGCCTAGTGAC 59.328 57.143 14.17 0.00 30.79 3.67
5954 7468 1.281287 ACCTAGTGTCGAGCCTAGTGA 59.719 52.381 14.17 0.00 30.79 3.41
5955 7469 1.752683 ACCTAGTGTCGAGCCTAGTG 58.247 55.000 14.17 9.69 30.79 2.74
5956 7470 2.093106 CAACCTAGTGTCGAGCCTAGT 58.907 52.381 14.17 3.84 30.79 2.57
5957 7471 2.356382 CTCAACCTAGTGTCGAGCCTAG 59.644 54.545 10.13 10.13 0.00 3.02
5958 7472 2.290768 ACTCAACCTAGTGTCGAGCCTA 60.291 50.000 0.00 0.00 0.00 3.93
5959 7473 1.178276 CTCAACCTAGTGTCGAGCCT 58.822 55.000 0.00 0.00 0.00 4.58
5960 7474 0.889306 ACTCAACCTAGTGTCGAGCC 59.111 55.000 0.00 0.00 0.00 4.70
5961 7475 1.983972 CACTCAACCTAGTGTCGAGC 58.016 55.000 0.00 0.00 41.63 5.03
5968 7482 4.652421 TGGTCTGTAAACACTCAACCTAGT 59.348 41.667 0.00 0.00 0.00 2.57
5969 7483 5.010719 TCTGGTCTGTAAACACTCAACCTAG 59.989 44.000 0.00 0.00 0.00 3.02
5970 7484 4.897076 TCTGGTCTGTAAACACTCAACCTA 59.103 41.667 0.00 0.00 0.00 3.08
5971 7485 3.709653 TCTGGTCTGTAAACACTCAACCT 59.290 43.478 0.00 0.00 0.00 3.50
5972 7486 3.808174 GTCTGGTCTGTAAACACTCAACC 59.192 47.826 0.00 0.00 0.00 3.77
5973 7487 4.270325 GTGTCTGGTCTGTAAACACTCAAC 59.730 45.833 0.00 0.00 37.75 3.18
5974 7488 4.161565 AGTGTCTGGTCTGTAAACACTCAA 59.838 41.667 0.84 0.00 45.44 3.02
5975 7489 3.704566 AGTGTCTGGTCTGTAAACACTCA 59.295 43.478 0.84 0.00 45.44 3.41
5976 7490 4.323553 AGTGTCTGGTCTGTAAACACTC 57.676 45.455 0.84 0.00 45.44 3.51
5978 7492 5.813080 AAAAGTGTCTGGTCTGTAAACAC 57.187 39.130 0.00 0.00 40.33 3.32
5979 7493 6.422701 CGATAAAAGTGTCTGGTCTGTAAACA 59.577 38.462 0.00 0.00 0.00 2.83
5980 7494 6.128634 CCGATAAAAGTGTCTGGTCTGTAAAC 60.129 42.308 0.00 0.00 0.00 2.01
5981 7495 5.929992 CCGATAAAAGTGTCTGGTCTGTAAA 59.070 40.000 0.00 0.00 0.00 2.01
5982 7496 5.011329 ACCGATAAAAGTGTCTGGTCTGTAA 59.989 40.000 0.00 0.00 0.00 2.41
5983 7497 4.525487 ACCGATAAAAGTGTCTGGTCTGTA 59.475 41.667 0.00 0.00 0.00 2.74
5984 7498 3.323979 ACCGATAAAAGTGTCTGGTCTGT 59.676 43.478 0.00 0.00 0.00 3.41
5985 7499 3.679980 CACCGATAAAAGTGTCTGGTCTG 59.320 47.826 0.00 0.00 0.00 3.51
5986 7500 3.323979 ACACCGATAAAAGTGTCTGGTCT 59.676 43.478 0.00 0.00 43.62 3.85
5987 7501 3.432252 CACACCGATAAAAGTGTCTGGTC 59.568 47.826 0.00 0.00 45.20 4.02
5988 7502 3.399330 CACACCGATAAAAGTGTCTGGT 58.601 45.455 0.00 0.00 45.20 4.00
5989 7503 2.159627 GCACACCGATAAAAGTGTCTGG 59.840 50.000 0.00 0.00 45.20 3.86
5990 7504 2.805671 TGCACACCGATAAAAGTGTCTG 59.194 45.455 0.00 0.00 45.20 3.51
5991 7505 3.067106 CTGCACACCGATAAAAGTGTCT 58.933 45.455 0.00 0.00 45.20 3.41
5992 7506 2.412847 GCTGCACACCGATAAAAGTGTC 60.413 50.000 0.00 0.00 45.20 3.67
5994 7508 1.535028 TGCTGCACACCGATAAAAGTG 59.465 47.619 0.00 0.00 39.93 3.16
5995 7509 1.535462 GTGCTGCACACCGATAAAAGT 59.465 47.619 26.70 0.00 44.02 2.66
5996 7510 2.247311 GTGCTGCACACCGATAAAAG 57.753 50.000 26.70 0.00 44.02 2.27
6007 7521 8.459521 TGTTTGTTATTAATAATGTGCTGCAC 57.540 30.769 25.15 25.15 34.56 4.57
6022 7536 7.915397 CGCCTAGCAAAGATTATGTTTGTTATT 59.085 33.333 14.72 3.66 37.25 1.40
6023 7537 7.417612 CGCCTAGCAAAGATTATGTTTGTTAT 58.582 34.615 14.72 5.87 37.25 1.89
6024 7538 6.183360 CCGCCTAGCAAAGATTATGTTTGTTA 60.183 38.462 14.72 12.27 37.25 2.41
6025 7539 5.393027 CCGCCTAGCAAAGATTATGTTTGTT 60.393 40.000 14.72 11.83 37.25 2.83
6026 7540 4.096382 CCGCCTAGCAAAGATTATGTTTGT 59.904 41.667 14.72 6.09 37.25 2.83
6027 7541 4.601019 CCGCCTAGCAAAGATTATGTTTG 58.399 43.478 10.01 10.01 37.85 2.93
6028 7542 3.066760 GCCGCCTAGCAAAGATTATGTTT 59.933 43.478 0.00 0.00 0.00 2.83
6029 7543 2.618709 GCCGCCTAGCAAAGATTATGTT 59.381 45.455 0.00 0.00 0.00 2.71
6030 7544 2.222027 GCCGCCTAGCAAAGATTATGT 58.778 47.619 0.00 0.00 0.00 2.29
6031 7545 2.221169 TGCCGCCTAGCAAAGATTATG 58.779 47.619 0.00 0.00 40.56 1.90
6032 7546 2.498167 CTGCCGCCTAGCAAAGATTAT 58.502 47.619 0.00 0.00 43.52 1.28
6033 7547 1.953559 CTGCCGCCTAGCAAAGATTA 58.046 50.000 0.00 0.00 43.52 1.75
6034 7548 1.379642 GCTGCCGCCTAGCAAAGATT 61.380 55.000 0.00 0.00 43.52 2.40
6035 7549 1.821332 GCTGCCGCCTAGCAAAGAT 60.821 57.895 0.00 0.00 43.52 2.40
6036 7550 2.436646 GCTGCCGCCTAGCAAAGA 60.437 61.111 0.00 0.00 43.52 2.52
6058 7572 2.886124 GCTCGGGTAGCGTGAAGC 60.886 66.667 0.00 0.00 42.53 3.86
6066 7580 2.413765 GCTTCGGAGCTCGGGTAG 59.586 66.667 19.94 17.24 45.65 3.18
6075 7589 4.069232 TCCGGCACTGCTTCGGAG 62.069 66.667 15.12 0.00 46.48 4.63
6077 7591 4.379243 ACTCCGGCACTGCTTCGG 62.379 66.667 11.35 11.35 44.59 4.30
6078 7592 2.811317 GACTCCGGCACTGCTTCG 60.811 66.667 0.00 0.00 0.00 3.79
6079 7593 2.435059 GGACTCCGGCACTGCTTC 60.435 66.667 0.00 0.00 0.00 3.86
6080 7594 4.021925 GGGACTCCGGCACTGCTT 62.022 66.667 0.00 0.00 0.00 3.91
6082 7596 4.329545 TTGGGACTCCGGCACTGC 62.330 66.667 0.00 0.00 35.24 4.40
6083 7597 2.046892 CTTGGGACTCCGGCACTG 60.047 66.667 0.00 0.00 35.24 3.66
6084 7598 4.021925 GCTTGGGACTCCGGCACT 62.022 66.667 0.00 0.00 35.49 4.40
6085 7599 4.329545 TGCTTGGGACTCCGGCAC 62.330 66.667 0.00 0.00 38.67 5.01
6086 7600 4.329545 GTGCTTGGGACTCCGGCA 62.330 66.667 0.00 5.30 40.29 5.69
6087 7601 3.959991 GAGTGCTTGGGACTCCGGC 62.960 68.421 0.00 0.00 34.84 6.13
6088 7602 2.266055 GAGTGCTTGGGACTCCGG 59.734 66.667 7.76 0.00 34.84 5.14
6091 7605 0.393537 CCATGGAGTGCTTGGGACTC 60.394 60.000 5.56 10.05 39.38 3.36
6092 7606 1.687612 CCATGGAGTGCTTGGGACT 59.312 57.895 5.56 0.00 0.00 3.85
6093 7607 4.326255 CCATGGAGTGCTTGGGAC 57.674 61.111 5.56 0.00 0.00 4.46
6096 7610 1.108776 CATTCCCATGGAGTGCTTGG 58.891 55.000 15.22 9.37 32.96 3.61
6110 7624 2.129785 GGTGGAGCATGGGCATTCC 61.130 63.158 0.00 0.00 44.61 3.01
6111 7625 2.484062 CGGTGGAGCATGGGCATTC 61.484 63.158 0.00 0.00 44.61 2.67
6112 7626 2.440796 CGGTGGAGCATGGGCATT 60.441 61.111 0.00 0.00 44.61 3.56
6113 7627 2.786512 AAACGGTGGAGCATGGGCAT 62.787 55.000 0.00 0.00 44.61 4.40
6114 7628 2.130821 TAAACGGTGGAGCATGGGCA 62.131 55.000 0.00 0.00 44.61 5.36
6115 7629 1.377987 TAAACGGTGGAGCATGGGC 60.378 57.895 0.00 0.00 41.61 5.36
6116 7630 1.366111 CGTAAACGGTGGAGCATGGG 61.366 60.000 0.00 0.00 35.37 4.00
6117 7631 1.977594 GCGTAAACGGTGGAGCATGG 61.978 60.000 4.49 0.00 40.23 3.66
6118 7632 1.295357 TGCGTAAACGGTGGAGCATG 61.295 55.000 4.49 0.00 40.23 4.06
6119 7633 0.604243 TTGCGTAAACGGTGGAGCAT 60.604 50.000 4.49 0.00 40.23 3.79
6120 7634 1.227586 TTGCGTAAACGGTGGAGCA 60.228 52.632 4.49 0.00 40.23 4.26
6121 7635 1.205820 GTTGCGTAAACGGTGGAGC 59.794 57.895 4.49 0.00 40.23 4.70
6122 7636 1.864176 GGTTGCGTAAACGGTGGAG 59.136 57.895 4.49 0.00 39.91 3.86
6123 7637 1.955157 CGGTTGCGTAAACGGTGGA 60.955 57.895 16.35 0.00 43.10 4.02
6124 7638 2.552268 CGGTTGCGTAAACGGTGG 59.448 61.111 16.35 0.00 43.10 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.