Multiple sequence alignment - TraesCS3D01G259600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G259600 chr3D 100.000 5435 0 0 1 5435 361381157 361375723 0.000000e+00 10037.0
1 TraesCS3D01G259600 chr3D 95.352 753 28 6 1 748 214958979 214959729 0.000000e+00 1190.0
2 TraesCS3D01G259600 chr3A 95.540 3834 141 8 761 4575 481887426 481883604 0.000000e+00 6106.0
3 TraesCS3D01G259600 chr3A 95.623 754 25 7 1 748 660861535 660860784 0.000000e+00 1203.0
4 TraesCS3D01G259600 chr3A 91.856 528 26 6 4719 5242 481879557 481879043 0.000000e+00 721.0
5 TraesCS3D01G259600 chr3A 81.308 107 20 0 2546 2652 481881071 481880965 2.700000e-13 87.9
6 TraesCS3D01G259600 chr3B 95.135 2076 95 1 2477 4546 470869001 470866926 0.000000e+00 3269.0
7 TraesCS3D01G259600 chr3B 97.205 823 15 1 1673 2487 470878131 470877309 0.000000e+00 1386.0
8 TraesCS3D01G259600 chr3B 94.651 673 30 5 826 1493 470878799 470878128 0.000000e+00 1038.0
9 TraesCS3D01G259600 chr3B 89.821 560 39 8 4719 5272 470862796 470862249 0.000000e+00 702.0
10 TraesCS3D01G259600 chr3B 78.472 144 29 2 2546 2688 470864311 470864169 5.800000e-15 93.5
11 TraesCS3D01G259600 chr7D 95.733 750 27 4 4 748 351641940 351641191 0.000000e+00 1203.0
12 TraesCS3D01G259600 chr7D 95.606 751 27 4 1 748 66543455 66544202 0.000000e+00 1199.0
13 TraesCS3D01G259600 chr2D 95.389 759 29 4 1 755 70391196 70391952 0.000000e+00 1203.0
14 TraesCS3D01G259600 chr2D 95.026 764 30 5 1 758 559833277 559834038 0.000000e+00 1194.0
15 TraesCS3D01G259600 chr2D 95.333 750 31 3 1 748 623949592 623950339 0.000000e+00 1188.0
16 TraesCS3D01G259600 chr2D 94.416 770 33 9 1 762 486304005 486304772 0.000000e+00 1175.0
17 TraesCS3D01G259600 chr6D 95.606 751 27 4 1 748 423491656 423492403 0.000000e+00 1199.0
18 TraesCS3D01G259600 chr1B 95.833 48 2 0 5269 5316 571427586 571427539 1.620000e-10 78.7
19 TraesCS3D01G259600 chr2B 94.118 51 1 1 5262 5312 323085372 323085420 5.840000e-10 76.8
20 TraesCS3D01G259600 chr2A 94.118 51 1 1 5262 5312 285622300 285622348 5.840000e-10 76.8
21 TraesCS3D01G259600 chr2A 87.931 58 7 0 5269 5326 68857140 68857197 9.770000e-08 69.4
22 TraesCS3D01G259600 chr6B 93.878 49 3 0 5269 5317 616933650 616933602 2.100000e-09 75.0
23 TraesCS3D01G259600 chr1A 97.674 43 1 0 5269 5311 376754398 376754440 2.100000e-09 75.0
24 TraesCS3D01G259600 chr5D 89.831 59 3 3 5258 5313 407527287 407527345 7.550000e-09 73.1
25 TraesCS3D01G259600 chr5A 89.831 59 3 3 5258 5313 512831161 512831219 7.550000e-09 73.1
26 TraesCS3D01G259600 chr7A 90.566 53 5 0 5265 5317 439794717 439794665 2.720000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G259600 chr3D 361375723 361381157 5434 True 10037.000000 10037 100.000000 1 5435 1 chr3D.!!$R1 5434
1 TraesCS3D01G259600 chr3D 214958979 214959729 750 False 1190.000000 1190 95.352000 1 748 1 chr3D.!!$F1 747
2 TraesCS3D01G259600 chr3A 481879043 481887426 8383 True 2304.966667 6106 89.568000 761 5242 3 chr3A.!!$R2 4481
3 TraesCS3D01G259600 chr3A 660860784 660861535 751 True 1203.000000 1203 95.623000 1 748 1 chr3A.!!$R1 747
4 TraesCS3D01G259600 chr3B 470862249 470869001 6752 True 1354.833333 3269 87.809333 2477 5272 3 chr3B.!!$R1 2795
5 TraesCS3D01G259600 chr3B 470877309 470878799 1490 True 1212.000000 1386 95.928000 826 2487 2 chr3B.!!$R2 1661
6 TraesCS3D01G259600 chr7D 351641191 351641940 749 True 1203.000000 1203 95.733000 4 748 1 chr7D.!!$R1 744
7 TraesCS3D01G259600 chr7D 66543455 66544202 747 False 1199.000000 1199 95.606000 1 748 1 chr7D.!!$F1 747
8 TraesCS3D01G259600 chr2D 70391196 70391952 756 False 1203.000000 1203 95.389000 1 755 1 chr2D.!!$F1 754
9 TraesCS3D01G259600 chr2D 559833277 559834038 761 False 1194.000000 1194 95.026000 1 758 1 chr2D.!!$F3 757
10 TraesCS3D01G259600 chr2D 623949592 623950339 747 False 1188.000000 1188 95.333000 1 748 1 chr2D.!!$F4 747
11 TraesCS3D01G259600 chr2D 486304005 486304772 767 False 1175.000000 1175 94.416000 1 762 1 chr2D.!!$F2 761
12 TraesCS3D01G259600 chr6D 423491656 423492403 747 False 1199.000000 1199 95.606000 1 748 1 chr6D.!!$F1 747

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
862 878 1.039856 TTGTTTCCAAGAAGCAGCCC 58.960 50.000 0.00 0.0 0.00 5.19 F
1054 1081 1.518367 TTCCCTCACCAACCTTCACT 58.482 50.000 0.00 0.0 0.00 3.41 F
1063 1090 2.222027 CCAACCTTCACTTCTCCACAC 58.778 52.381 0.00 0.0 0.00 3.82 F
2565 2600 0.804989 GAAACCAGCTGAATGGGACG 59.195 55.000 17.39 0.0 45.25 4.79 F
3066 3101 0.529378 CCTCCAATGCACTTTCTGGC 59.471 55.000 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1998 2033 1.608590 CTTGTGAGGTTCGGCATTGTT 59.391 47.619 0.0 0.0 0.00 2.83 R
2565 2600 1.755179 CAGTGATTGGTGTGGGGATC 58.245 55.000 0.0 0.0 0.00 3.36 R
2701 2736 1.856629 CTGCTTGGAATGGGACCAAT 58.143 50.000 0.0 0.0 44.74 3.16 R
3772 3813 0.460284 CGGTGATGCAGGTACTCCAC 60.460 60.000 0.0 0.0 34.60 4.02 R
4664 4713 0.103208 AGCCGCTCCGATAGAAACAG 59.897 55.000 0.0 0.0 39.76 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
219 226 5.221661 ACTCTCTCTTTTACCCGAACATGTT 60.222 40.000 11.78 11.78 0.00 2.71
302 311 8.303876 GGCAACTCCTAAAGTTTTGAAATCATA 58.696 33.333 0.00 0.00 46.26 2.15
700 716 1.765904 TCTTAGGCACCACACAGAACA 59.234 47.619 0.00 0.00 0.00 3.18
748 764 1.153628 GTGGCAGTTATCGGCGTCT 60.154 57.895 6.85 0.00 35.70 4.18
795 811 3.497332 TCCGAATCCGATTCAGGTATCT 58.503 45.455 18.95 0.00 39.22 1.98
796 812 3.255888 TCCGAATCCGATTCAGGTATCTG 59.744 47.826 18.95 0.00 39.22 2.90
819 835 3.169099 TGAAGGAAAGAGCTCTAGCACT 58.831 45.455 18.59 10.31 43.66 4.40
862 878 1.039856 TTGTTTCCAAGAAGCAGCCC 58.960 50.000 0.00 0.00 0.00 5.19
928 955 5.844396 GCATTACGCCTCGTCATTAAATAAC 59.156 40.000 0.00 0.00 41.54 1.89
1054 1081 1.518367 TTCCCTCACCAACCTTCACT 58.482 50.000 0.00 0.00 0.00 3.41
1063 1090 2.222027 CCAACCTTCACTTCTCCACAC 58.778 52.381 0.00 0.00 0.00 3.82
1331 1358 3.285215 GCTCCATGGCAGCATCGG 61.285 66.667 23.33 0.00 36.82 4.18
1480 1507 4.181010 CAGGTGCCATCCCCTCCG 62.181 72.222 0.00 0.00 0.00 4.63
1561 1588 3.485216 CGCAATCCCATACGAGTTTCAAC 60.485 47.826 0.00 0.00 0.00 3.18
1588 1615 2.564947 AGGAAACTTCAGTCGCTGAGAT 59.435 45.455 9.04 1.03 41.75 2.75
1594 1621 2.354109 TCAGTCGCTGAGATTGTCAC 57.646 50.000 5.59 0.00 35.39 3.67
1659 1686 2.889617 CCCGATCTGCGTGTGGTA 59.110 61.111 0.00 0.00 38.67 3.25
2026 2061 3.119955 GCCGAACCTCACAAGAATTTACC 60.120 47.826 0.00 0.00 0.00 2.85
2031 2066 5.304686 ACCTCACAAGAATTTACCTGTCA 57.695 39.130 0.00 0.00 0.00 3.58
2527 2562 7.480760 ACATTTGCCAATCTTACCAACTTAT 57.519 32.000 0.00 0.00 0.00 1.73
2565 2600 0.804989 GAAACCAGCTGAATGGGACG 59.195 55.000 17.39 0.00 45.25 4.79
2640 2675 2.756760 CAATAGCTTGTCTGGCACCATT 59.243 45.455 0.00 0.00 0.00 3.16
2668 2703 5.105997 GCAGAAATCAGTGGATTAACAAGCT 60.106 40.000 0.00 0.00 42.87 3.74
2701 2736 4.186926 GCATCTTGACAGCAATAGACTCA 58.813 43.478 0.00 0.00 32.68 3.41
2722 2757 2.409870 GGTCCCATTCCAAGCAGCG 61.410 63.158 0.00 0.00 0.00 5.18
2780 2815 2.739913 CCCGCAACTCGTTATCTTCAAA 59.260 45.455 0.00 0.00 36.19 2.69
2781 2816 3.374058 CCCGCAACTCGTTATCTTCAAAT 59.626 43.478 0.00 0.00 36.19 2.32
2802 2837 5.801531 ATATACCAACAAGTCTATGGCGA 57.198 39.130 0.00 0.00 37.77 5.54
2857 2892 2.408565 ACTCTTTCAGTGGTTCCCTGA 58.591 47.619 6.12 6.12 37.18 3.86
2893 2928 3.402628 AACTGACTGCAATTACCGAGT 57.597 42.857 0.00 0.00 0.00 4.18
2899 2934 2.038557 ACTGCAATTACCGAGTTGGACT 59.961 45.455 2.42 0.00 42.00 3.85
2922 2957 2.950309 GTCGAGTAACCAGCTATCAGGA 59.050 50.000 0.00 0.00 0.00 3.86
2947 2982 1.656818 CCCAACTTCATTCGGCGCAT 61.657 55.000 10.83 0.00 0.00 4.73
3066 3101 0.529378 CCTCCAATGCACTTTCTGGC 59.471 55.000 0.00 0.00 0.00 4.85
3103 3138 4.919774 TTGGCCAACCTCACTTATCTTA 57.080 40.909 16.05 0.00 36.63 2.10
3153 3188 3.312890 AGATGGACAGATACCAGAAGGG 58.687 50.000 0.00 0.00 40.89 3.95
3163 3198 0.991355 ACCAGAAGGGGGTGTGTTCA 60.991 55.000 0.00 0.00 42.91 3.18
3175 3210 2.297701 GTGTGTTCACCAACATCACCT 58.702 47.619 0.37 0.00 44.47 4.00
3178 3213 2.948979 GTGTTCACCAACATCACCTTCA 59.051 45.455 0.00 0.00 44.47 3.02
3207 3242 3.264193 TGATGGGAAATAGTGCACTCTGT 59.736 43.478 25.56 9.02 0.00 3.41
3336 3371 7.622893 TTTATCAGCTTGCATGTACATGTTA 57.377 32.000 31.10 20.31 40.80 2.41
3375 3410 7.394016 TGAATAAGCAAGGAAAGATGTCACTA 58.606 34.615 0.00 0.00 0.00 2.74
4182 4223 3.010138 TGAGCTTAAGGCAGTGGGTTAAT 59.990 43.478 4.29 0.00 44.79 1.40
4193 4234 3.131046 CAGTGGGTTAATCAAGCATTCCC 59.869 47.826 0.00 0.00 33.68 3.97
4196 4237 3.705579 TGGGTTAATCAAGCATTCCCATG 59.294 43.478 0.00 0.00 34.78 3.66
4203 4244 2.821378 TCAAGCATTCCCATGTGAACTG 59.179 45.455 0.00 0.00 32.28 3.16
4318 4359 3.543680 ATACTTTCCTGGTGTCCATCG 57.456 47.619 0.00 0.00 30.82 3.84
4383 4424 3.598693 ATGCCAATGGATGATGTGGTA 57.401 42.857 2.05 0.00 33.43 3.25
4392 4433 7.219322 CAATGGATGATGTGGTAGTCAGATTA 58.781 38.462 0.00 0.00 28.63 1.75
4461 4510 1.915769 ACCCTGCCTCACTCCTCAC 60.916 63.158 0.00 0.00 0.00 3.51
4477 4526 2.544486 CCTCACAAGAAAAAGCACCAGC 60.544 50.000 0.00 0.00 42.56 4.85
4556 4605 8.954950 AATGACTGTAATTCTTCCTATGACAG 57.045 34.615 0.00 0.00 39.45 3.51
4575 4624 7.646548 TGACAGTATATAGTTGCTCTCTGTT 57.353 36.000 0.00 0.00 35.50 3.16
4576 4625 7.708051 TGACAGTATATAGTTGCTCTCTGTTC 58.292 38.462 0.00 0.00 35.50 3.18
4577 4626 7.339466 TGACAGTATATAGTTGCTCTCTGTTCA 59.661 37.037 0.00 0.00 35.50 3.18
4578 4627 7.484975 ACAGTATATAGTTGCTCTCTGTTCAC 58.515 38.462 0.00 0.00 32.15 3.18
4581 4630 7.999545 AGTATATAGTTGCTCTCTGTTCACCTA 59.000 37.037 0.00 0.00 0.00 3.08
4582 4631 7.661536 ATATAGTTGCTCTCTGTTCACCTAA 57.338 36.000 0.00 0.00 0.00 2.69
4583 4632 4.689612 AGTTGCTCTCTGTTCACCTAAA 57.310 40.909 0.00 0.00 0.00 1.85
4584 4633 5.036117 AGTTGCTCTCTGTTCACCTAAAA 57.964 39.130 0.00 0.00 0.00 1.52
4607 4656 4.989279 AACTGACATTGTAATGCCATCC 57.011 40.909 4.58 0.00 40.04 3.51
4608 4657 3.966979 ACTGACATTGTAATGCCATCCA 58.033 40.909 4.58 0.00 40.04 3.41
4609 4658 4.343231 ACTGACATTGTAATGCCATCCAA 58.657 39.130 4.58 0.00 40.04 3.53
4610 4659 4.957954 ACTGACATTGTAATGCCATCCAAT 59.042 37.500 4.58 0.00 40.04 3.16
4611 4660 5.163488 ACTGACATTGTAATGCCATCCAATG 60.163 40.000 20.11 20.11 45.98 2.82
4612 4661 4.053295 GACATTGTAATGCCATCCAATGC 58.947 43.478 21.00 14.05 44.98 3.56
4613 4662 3.451540 ACATTGTAATGCCATCCAATGCA 59.548 39.130 21.00 0.00 44.98 3.96
4614 4663 4.081031 ACATTGTAATGCCATCCAATGCAA 60.081 37.500 21.00 5.38 44.98 4.08
4615 4664 4.548451 TTGTAATGCCATCCAATGCAAA 57.452 36.364 0.00 0.00 41.50 3.68
4616 4665 4.757019 TGTAATGCCATCCAATGCAAAT 57.243 36.364 0.00 0.00 41.50 2.32
4617 4666 5.866159 TGTAATGCCATCCAATGCAAATA 57.134 34.783 0.00 0.00 41.50 1.40
4618 4667 6.422344 TGTAATGCCATCCAATGCAAATAT 57.578 33.333 0.00 0.00 41.50 1.28
4619 4668 6.457355 TGTAATGCCATCCAATGCAAATATC 58.543 36.000 0.00 0.00 41.50 1.63
4620 4669 4.546829 ATGCCATCCAATGCAAATATCC 57.453 40.909 0.00 0.00 41.50 2.59
4621 4670 2.633967 TGCCATCCAATGCAAATATCCC 59.366 45.455 0.00 0.00 33.87 3.85
4622 4671 2.633967 GCCATCCAATGCAAATATCCCA 59.366 45.455 0.00 0.00 0.00 4.37
4623 4672 3.262405 GCCATCCAATGCAAATATCCCAT 59.738 43.478 0.00 0.00 0.00 4.00
4624 4673 4.263156 GCCATCCAATGCAAATATCCCATT 60.263 41.667 0.00 0.00 0.00 3.16
4625 4674 5.484715 CCATCCAATGCAAATATCCCATTC 58.515 41.667 0.00 0.00 0.00 2.67
4626 4675 5.012251 CCATCCAATGCAAATATCCCATTCA 59.988 40.000 0.00 0.00 0.00 2.57
4627 4676 5.534207 TCCAATGCAAATATCCCATTCAC 57.466 39.130 0.00 0.00 0.00 3.18
4628 4677 4.961099 TCCAATGCAAATATCCCATTCACA 59.039 37.500 0.00 0.00 0.00 3.58
4629 4678 5.069383 TCCAATGCAAATATCCCATTCACAG 59.931 40.000 0.00 0.00 0.00 3.66
4630 4679 4.595762 ATGCAAATATCCCATTCACAGC 57.404 40.909 0.00 0.00 0.00 4.40
4631 4680 2.358582 TGCAAATATCCCATTCACAGCG 59.641 45.455 0.00 0.00 0.00 5.18
4632 4681 2.358898 GCAAATATCCCATTCACAGCGT 59.641 45.455 0.00 0.00 0.00 5.07
4633 4682 3.793129 GCAAATATCCCATTCACAGCGTG 60.793 47.826 2.79 2.79 34.45 5.34
4634 4683 3.558931 AATATCCCATTCACAGCGTGA 57.441 42.857 7.20 7.20 41.09 4.35
4644 4693 3.965379 TCACAGCGTGAAACCCTATAA 57.035 42.857 8.59 0.00 39.78 0.98
4645 4694 4.274602 TCACAGCGTGAAACCCTATAAA 57.725 40.909 8.59 0.00 39.78 1.40
4646 4695 4.839121 TCACAGCGTGAAACCCTATAAAT 58.161 39.130 8.59 0.00 39.78 1.40
4647 4696 4.873827 TCACAGCGTGAAACCCTATAAATC 59.126 41.667 8.59 0.00 39.78 2.17
4648 4697 3.869246 ACAGCGTGAAACCCTATAAATCG 59.131 43.478 0.00 0.00 0.00 3.34
4649 4698 3.869246 CAGCGTGAAACCCTATAAATCGT 59.131 43.478 0.00 0.00 0.00 3.73
4650 4699 4.025979 CAGCGTGAAACCCTATAAATCGTC 60.026 45.833 0.00 0.00 0.00 4.20
4651 4700 3.866910 GCGTGAAACCCTATAAATCGTCA 59.133 43.478 0.00 0.00 0.00 4.35
4652 4701 4.260091 GCGTGAAACCCTATAAATCGTCAC 60.260 45.833 0.00 0.00 0.00 3.67
4653 4702 5.107133 CGTGAAACCCTATAAATCGTCACT 58.893 41.667 0.00 0.00 33.59 3.41
4654 4703 5.579511 CGTGAAACCCTATAAATCGTCACTT 59.420 40.000 0.00 0.00 33.59 3.16
4655 4704 6.455113 CGTGAAACCCTATAAATCGTCACTTG 60.455 42.308 0.00 0.00 33.59 3.16
4656 4705 5.878116 TGAAACCCTATAAATCGTCACTTGG 59.122 40.000 0.00 0.00 0.00 3.61
4657 4706 5.687166 AACCCTATAAATCGTCACTTGGA 57.313 39.130 0.00 0.00 0.00 3.53
4658 4707 5.277857 ACCCTATAAATCGTCACTTGGAG 57.722 43.478 0.00 0.00 0.00 3.86
4659 4708 4.058817 CCCTATAAATCGTCACTTGGAGC 58.941 47.826 0.00 0.00 0.00 4.70
4660 4709 3.736252 CCTATAAATCGTCACTTGGAGCG 59.264 47.826 0.00 0.00 0.00 5.03
4661 4710 1.355971 TAAATCGTCACTTGGAGCGC 58.644 50.000 0.00 0.00 0.00 5.92
4662 4711 0.602638 AAATCGTCACTTGGAGCGCA 60.603 50.000 11.47 0.00 0.00 6.09
4663 4712 0.602638 AATCGTCACTTGGAGCGCAA 60.603 50.000 11.47 0.00 0.00 4.85
4664 4713 1.291877 ATCGTCACTTGGAGCGCAAC 61.292 55.000 11.47 1.37 0.00 4.17
4680 4729 1.324736 GCAACTGTTTCTATCGGAGCG 59.675 52.381 0.00 0.00 0.00 5.03
4739 8849 2.422597 TCAACTGGTAAAGCATCACGG 58.577 47.619 0.00 0.00 0.00 4.94
4775 8885 4.098894 TCAGCTATGGGATCATGATGCTA 58.901 43.478 24.25 20.06 35.61 3.49
4787 8897 4.026052 TCATGATGCTAGAGGTCTTCACA 58.974 43.478 0.00 0.00 0.00 3.58
4815 8925 2.743718 CCACTGACCCGCTGTTCT 59.256 61.111 0.00 0.00 0.00 3.01
4816 8926 1.541310 CCCACTGACCCGCTGTTCTA 61.541 60.000 0.00 0.00 0.00 2.10
4901 9011 2.915463 CGACAACGAGGTTCTATCACAC 59.085 50.000 0.00 0.00 42.66 3.82
4994 9104 5.118990 TGCCTTGCATCTGTAATAGAGTTC 58.881 41.667 0.00 0.00 39.20 3.01
5018 9128 5.576774 CAGTTTACAGTGCTCATCAACGATA 59.423 40.000 0.00 0.00 0.00 2.92
5019 9129 6.256539 CAGTTTACAGTGCTCATCAACGATAT 59.743 38.462 0.00 0.00 0.00 1.63
5103 9213 2.305635 TGCTTGCAAATGAGGTAGAGGA 59.694 45.455 0.00 0.00 0.00 3.71
5108 9218 2.815478 CAAATGAGGTAGAGGACGAGC 58.185 52.381 0.00 0.00 0.00 5.03
5109 9219 2.145397 AATGAGGTAGAGGACGAGCA 57.855 50.000 0.00 0.00 0.00 4.26
5117 9227 0.250338 AGAGGACGAGCAAAACCACC 60.250 55.000 0.00 0.00 0.00 4.61
5118 9228 0.250338 GAGGACGAGCAAAACCACCT 60.250 55.000 0.00 0.00 0.00 4.00
5119 9229 0.182775 AGGACGAGCAAAACCACCTT 59.817 50.000 0.00 0.00 0.00 3.50
5120 9230 0.591659 GGACGAGCAAAACCACCTTC 59.408 55.000 0.00 0.00 0.00 3.46
5121 9231 1.594331 GACGAGCAAAACCACCTTCT 58.406 50.000 0.00 0.00 0.00 2.85
5122 9232 1.264288 GACGAGCAAAACCACCTTCTG 59.736 52.381 0.00 0.00 0.00 3.02
5127 9237 1.138859 GCAAAACCACCTTCTGGCTTT 59.861 47.619 0.00 0.00 45.32 3.51
5140 9250 5.106791 CCTTCTGGCTTTTGCTATCATATCG 60.107 44.000 0.00 0.00 46.54 2.92
5144 9254 3.120060 GGCTTTTGCTATCATATCGCCTG 60.120 47.826 0.00 0.00 46.54 4.85
5177 9287 6.885376 AGATCCTCTACTTCTTGAGTTAACGA 59.115 38.462 0.00 0.00 39.86 3.85
5226 9340 6.292389 AGAAATAGAACTGTAATCATGCGC 57.708 37.500 0.00 0.00 0.00 6.09
5242 9358 4.397730 TCATGCGCCAATTGTATAACTTGT 59.602 37.500 4.18 0.00 0.00 3.16
5244 9360 4.728534 TGCGCCAATTGTATAACTTGTTC 58.271 39.130 4.18 0.00 0.00 3.18
5246 9362 5.028375 GCGCCAATTGTATAACTTGTTCTC 58.972 41.667 4.43 0.00 0.00 2.87
5247 9363 5.163754 GCGCCAATTGTATAACTTGTTCTCT 60.164 40.000 4.43 0.00 0.00 3.10
5262 9378 5.545063 TGTTCTCTGTAACAGATGGTCAA 57.455 39.130 0.00 0.00 39.92 3.18
5267 9383 8.821894 GTTCTCTGTAACAGATGGTCAATAATC 58.178 37.037 0.00 0.00 39.92 1.75
5272 9388 9.469807 CTGTAACAGATGGTCAATAATCTACTC 57.530 37.037 0.00 0.00 32.44 2.59
5273 9389 8.421784 TGTAACAGATGGTCAATAATCTACTCC 58.578 37.037 0.00 0.00 31.87 3.85
5274 9390 6.426646 ACAGATGGTCAATAATCTACTCCC 57.573 41.667 0.00 0.00 31.87 4.30
5275 9391 6.146760 ACAGATGGTCAATAATCTACTCCCT 58.853 40.000 0.00 0.00 31.87 4.20
5276 9392 6.268847 ACAGATGGTCAATAATCTACTCCCTC 59.731 42.308 0.00 0.00 31.87 4.30
5277 9393 5.782845 AGATGGTCAATAATCTACTCCCTCC 59.217 44.000 0.00 0.00 31.31 4.30
5278 9394 3.895656 TGGTCAATAATCTACTCCCTCCG 59.104 47.826 0.00 0.00 0.00 4.63
5279 9395 3.896272 GGTCAATAATCTACTCCCTCCGT 59.104 47.826 0.00 0.00 0.00 4.69
5280 9396 5.075493 GGTCAATAATCTACTCCCTCCGTA 58.925 45.833 0.00 0.00 0.00 4.02
5281 9397 5.537674 GGTCAATAATCTACTCCCTCCGTAA 59.462 44.000 0.00 0.00 0.00 3.18
5282 9398 6.041296 GGTCAATAATCTACTCCCTCCGTAAA 59.959 42.308 0.00 0.00 0.00 2.01
5283 9399 6.922407 GTCAATAATCTACTCCCTCCGTAAAC 59.078 42.308 0.00 0.00 0.00 2.01
5284 9400 6.608405 TCAATAATCTACTCCCTCCGTAAACA 59.392 38.462 0.00 0.00 0.00 2.83
5285 9401 7.124599 TCAATAATCTACTCCCTCCGTAAACAA 59.875 37.037 0.00 0.00 0.00 2.83
5286 9402 5.750352 AATCTACTCCCTCCGTAAACAAA 57.250 39.130 0.00 0.00 0.00 2.83
5287 9403 5.952347 ATCTACTCCCTCCGTAAACAAAT 57.048 39.130 0.00 0.00 0.00 2.32
5288 9404 7.427989 AATCTACTCCCTCCGTAAACAAATA 57.572 36.000 0.00 0.00 0.00 1.40
5289 9405 7.613551 ATCTACTCCCTCCGTAAACAAATAT 57.386 36.000 0.00 0.00 0.00 1.28
5290 9406 8.716674 ATCTACTCCCTCCGTAAACAAATATA 57.283 34.615 0.00 0.00 0.00 0.86
5291 9407 8.537728 TCTACTCCCTCCGTAAACAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
5292 9408 8.636213 TCTACTCCCTCCGTAAACAAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
5293 9409 7.427989 ACTCCCTCCGTAAACAAATATAAGA 57.572 36.000 0.00 0.00 0.00 2.10
5294 9410 7.270779 ACTCCCTCCGTAAACAAATATAAGAC 58.729 38.462 0.00 0.00 0.00 3.01
5295 9411 6.275335 TCCCTCCGTAAACAAATATAAGACG 58.725 40.000 0.00 0.00 0.00 4.18
5296 9412 6.044682 CCCTCCGTAAACAAATATAAGACGT 58.955 40.000 0.00 0.00 0.00 4.34
5297 9413 6.536224 CCCTCCGTAAACAAATATAAGACGTT 59.464 38.462 0.00 0.00 0.00 3.99
5298 9414 7.064966 CCCTCCGTAAACAAATATAAGACGTTT 59.935 37.037 0.00 0.00 34.40 3.60
5299 9415 8.445493 CCTCCGTAAACAAATATAAGACGTTTT 58.555 33.333 0.00 0.00 32.42 2.43
5315 9431 8.658499 AAGACGTTTTAGATCACTAAAGTTGT 57.342 30.769 0.00 0.00 45.40 3.32
5316 9432 9.754382 AAGACGTTTTAGATCACTAAAGTTGTA 57.246 29.630 0.00 0.00 45.40 2.41
5317 9433 9.754382 AGACGTTTTAGATCACTAAAGTTGTAA 57.246 29.630 0.00 0.00 45.40 2.41
5335 9451 5.868043 TGTAAACAGATCAATGCAGTCTG 57.132 39.130 15.47 15.47 43.76 3.51
5336 9452 3.844577 AAACAGATCAATGCAGTCTGC 57.155 42.857 18.32 18.32 42.33 4.26
5337 9453 2.783609 ACAGATCAATGCAGTCTGCT 57.216 45.000 24.76 8.52 45.31 4.24
5338 9454 2.357075 ACAGATCAATGCAGTCTGCTG 58.643 47.619 24.76 15.89 45.31 4.41
5339 9455 1.671328 CAGATCAATGCAGTCTGCTGG 59.329 52.381 24.76 14.10 45.31 4.85
5340 9456 1.558294 AGATCAATGCAGTCTGCTGGA 59.442 47.619 24.76 18.41 46.85 3.86
5346 9462 1.742761 TGCAGTCTGCTGGATTAAGC 58.257 50.000 24.76 0.00 45.31 3.09
5356 9472 2.802816 GCTGGATTAAGCATCGTACAGG 59.197 50.000 0.00 0.00 43.01 4.00
5357 9473 3.492656 GCTGGATTAAGCATCGTACAGGA 60.493 47.826 0.00 0.00 43.01 3.86
5358 9474 4.693283 CTGGATTAAGCATCGTACAGGAA 58.307 43.478 0.00 0.00 31.73 3.36
5359 9475 5.092554 TGGATTAAGCATCGTACAGGAAA 57.907 39.130 0.00 0.00 31.73 3.13
5360 9476 4.873827 TGGATTAAGCATCGTACAGGAAAC 59.126 41.667 0.00 0.00 31.73 2.78
5361 9477 5.116882 GGATTAAGCATCGTACAGGAAACT 58.883 41.667 0.00 0.00 34.64 2.66
5362 9478 5.585047 GGATTAAGCATCGTACAGGAAACTT 59.415 40.000 0.00 0.00 32.60 2.66
5363 9479 6.759827 GGATTAAGCATCGTACAGGAAACTTA 59.240 38.462 0.00 0.00 32.60 2.24
5364 9480 7.441458 GGATTAAGCATCGTACAGGAAACTTAT 59.559 37.037 0.00 0.00 32.60 1.73
5365 9481 7.534085 TTAAGCATCGTACAGGAAACTTATG 57.466 36.000 0.00 0.00 40.21 1.90
5366 9482 5.086104 AGCATCGTACAGGAAACTTATGT 57.914 39.130 0.00 0.00 40.21 2.29
5367 9483 5.488341 AGCATCGTACAGGAAACTTATGTT 58.512 37.500 0.00 0.00 40.21 2.71
5368 9484 5.581085 AGCATCGTACAGGAAACTTATGTTC 59.419 40.000 0.00 0.00 40.21 3.18
5369 9485 5.350365 GCATCGTACAGGAAACTTATGTTCA 59.650 40.000 0.00 0.00 40.21 3.18
5370 9486 6.455646 GCATCGTACAGGAAACTTATGTTCAG 60.456 42.308 0.00 0.00 40.21 3.02
5371 9487 5.475719 TCGTACAGGAAACTTATGTTCAGG 58.524 41.667 0.00 0.00 40.21 3.86
5372 9488 5.011329 TCGTACAGGAAACTTATGTTCAGGT 59.989 40.000 0.00 0.00 40.21 4.00
5373 9489 5.120208 CGTACAGGAAACTTATGTTCAGGTG 59.880 44.000 0.00 0.00 40.21 4.00
5374 9490 5.048846 ACAGGAAACTTATGTTCAGGTGT 57.951 39.130 0.00 0.00 40.21 4.16
5375 9491 5.445964 ACAGGAAACTTATGTTCAGGTGTT 58.554 37.500 0.00 0.00 40.21 3.32
5376 9492 5.299279 ACAGGAAACTTATGTTCAGGTGTTG 59.701 40.000 0.00 0.00 40.21 3.33
5377 9493 5.299279 CAGGAAACTTATGTTCAGGTGTTGT 59.701 40.000 0.00 0.00 40.21 3.32
5378 9494 6.485313 CAGGAAACTTATGTTCAGGTGTTGTA 59.515 38.462 0.00 0.00 40.21 2.41
5379 9495 6.485648 AGGAAACTTATGTTCAGGTGTTGTAC 59.514 38.462 0.00 0.00 37.44 2.90
5380 9496 5.917541 AACTTATGTTCAGGTGTTGTACG 57.082 39.130 0.00 0.00 30.35 3.67
5381 9497 3.744426 ACTTATGTTCAGGTGTTGTACGC 59.256 43.478 0.00 0.00 30.35 4.42
5382 9498 2.248280 ATGTTCAGGTGTTGTACGCA 57.752 45.000 0.00 0.00 30.35 5.24
5383 9499 1.292061 TGTTCAGGTGTTGTACGCAC 58.708 50.000 10.74 10.74 36.22 5.34
5384 9500 1.292061 GTTCAGGTGTTGTACGCACA 58.708 50.000 18.07 7.90 38.51 4.57
5385 9501 1.260561 GTTCAGGTGTTGTACGCACAG 59.739 52.381 18.07 11.78 38.51 3.66
5386 9502 0.462375 TCAGGTGTTGTACGCACAGT 59.538 50.000 18.07 5.93 38.51 3.55
5387 9503 1.134640 TCAGGTGTTGTACGCACAGTT 60.135 47.619 18.07 4.81 38.51 3.16
5388 9504 1.668751 CAGGTGTTGTACGCACAGTTT 59.331 47.619 18.07 2.92 38.51 2.66
5389 9505 2.096819 CAGGTGTTGTACGCACAGTTTT 59.903 45.455 18.07 1.05 38.51 2.43
5390 9506 2.353579 AGGTGTTGTACGCACAGTTTTC 59.646 45.455 18.07 4.24 38.51 2.29
5391 9507 2.359598 GTGTTGTACGCACAGTTTTCG 58.640 47.619 13.39 0.00 35.67 3.46
5392 9508 2.001159 TGTTGTACGCACAGTTTTCGT 58.999 42.857 0.00 0.00 39.88 3.85
5393 9509 2.415857 TGTTGTACGCACAGTTTTCGTT 59.584 40.909 0.00 0.00 37.61 3.85
5394 9510 3.024313 GTTGTACGCACAGTTTTCGTTC 58.976 45.455 0.00 0.00 37.61 3.95
5395 9511 2.269172 TGTACGCACAGTTTTCGTTCA 58.731 42.857 0.00 0.00 37.61 3.18
5396 9512 2.283086 TGTACGCACAGTTTTCGTTCAG 59.717 45.455 0.00 0.00 37.61 3.02
5397 9513 0.655733 ACGCACAGTTTTCGTTCAGG 59.344 50.000 0.00 0.00 31.89 3.86
5398 9514 0.655733 CGCACAGTTTTCGTTCAGGT 59.344 50.000 0.00 0.00 0.00 4.00
5399 9515 1.332904 CGCACAGTTTTCGTTCAGGTC 60.333 52.381 0.00 0.00 0.00 3.85
5400 9516 1.940613 GCACAGTTTTCGTTCAGGTCT 59.059 47.619 0.00 0.00 0.00 3.85
5401 9517 2.032808 GCACAGTTTTCGTTCAGGTCTC 60.033 50.000 0.00 0.00 0.00 3.36
5402 9518 2.544267 CACAGTTTTCGTTCAGGTCTCC 59.456 50.000 0.00 0.00 0.00 3.71
5403 9519 2.143925 CAGTTTTCGTTCAGGTCTCCC 58.856 52.381 0.00 0.00 0.00 4.30
5404 9520 2.047830 AGTTTTCGTTCAGGTCTCCCT 58.952 47.619 0.00 0.00 44.02 4.20
5415 9531 1.213926 AGGTCTCCCTGATCCATTTGC 59.786 52.381 0.00 0.00 40.58 3.68
5416 9532 1.213926 GGTCTCCCTGATCCATTTGCT 59.786 52.381 0.00 0.00 0.00 3.91
5417 9533 2.357569 GGTCTCCCTGATCCATTTGCTT 60.358 50.000 0.00 0.00 0.00 3.91
5418 9534 3.117888 GGTCTCCCTGATCCATTTGCTTA 60.118 47.826 0.00 0.00 0.00 3.09
5419 9535 4.133078 GTCTCCCTGATCCATTTGCTTAG 58.867 47.826 0.00 0.00 0.00 2.18
5420 9536 3.782523 TCTCCCTGATCCATTTGCTTAGT 59.217 43.478 0.00 0.00 0.00 2.24
5421 9537 4.133078 CTCCCTGATCCATTTGCTTAGTC 58.867 47.826 0.00 0.00 0.00 2.59
5422 9538 3.782523 TCCCTGATCCATTTGCTTAGTCT 59.217 43.478 0.00 0.00 0.00 3.24
5423 9539 4.968719 TCCCTGATCCATTTGCTTAGTCTA 59.031 41.667 0.00 0.00 0.00 2.59
5424 9540 5.428457 TCCCTGATCCATTTGCTTAGTCTAA 59.572 40.000 0.00 0.00 0.00 2.10
5425 9541 6.101734 TCCCTGATCCATTTGCTTAGTCTAAT 59.898 38.462 0.00 0.00 0.00 1.73
5426 9542 6.774656 CCCTGATCCATTTGCTTAGTCTAATT 59.225 38.462 0.00 0.00 0.00 1.40
5427 9543 7.286316 CCCTGATCCATTTGCTTAGTCTAATTT 59.714 37.037 0.00 0.00 0.00 1.82
5428 9544 8.689972 CCTGATCCATTTGCTTAGTCTAATTTT 58.310 33.333 0.00 0.00 0.00 1.82
5429 9545 9.727627 CTGATCCATTTGCTTAGTCTAATTTTC 57.272 33.333 0.00 0.00 0.00 2.29
5430 9546 9.466497 TGATCCATTTGCTTAGTCTAATTTTCT 57.534 29.630 0.00 0.00 0.00 2.52
5433 9549 9.077885 TCCATTTGCTTAGTCTAATTTTCTTGT 57.922 29.630 0.00 0.00 0.00 3.16
5434 9550 9.346725 CCATTTGCTTAGTCTAATTTTCTTGTC 57.653 33.333 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 72 1.463444 GCAACTGACATGTTCGGGTAC 59.537 52.381 0.00 0.00 34.44 3.34
253 262 3.514309 CCCTACTAACACTAGGCAGTTGT 59.486 47.826 7.49 6.55 30.46 3.32
302 311 1.001406 GTCTGGTCTACTGCAGTTGCT 59.999 52.381 27.06 1.44 42.66 3.91
359 368 6.881065 CCATCTCAGGTCAAAGTTTCAGATTA 59.119 38.462 0.00 0.00 0.00 1.75
366 375 3.228188 TGCCATCTCAGGTCAAAGTTT 57.772 42.857 0.00 0.00 0.00 2.66
509 519 1.005394 CGCCCCACGTGACTTTACT 60.005 57.895 19.30 0.00 36.87 2.24
601 613 1.236282 CCCTCCCGGTCCCTCTTAT 59.764 63.158 0.00 0.00 0.00 1.73
623 637 3.726517 CGCCCACACGCCTCTTTG 61.727 66.667 0.00 0.00 0.00 2.77
768 784 0.105039 GAATCGGATTCGGAGGCACT 59.895 55.000 14.43 0.00 36.71 4.40
795 811 3.771479 TGCTAGAGCTCTTTCCTTCATCA 59.229 43.478 23.84 0.24 42.66 3.07
796 812 4.119136 GTGCTAGAGCTCTTTCCTTCATC 58.881 47.826 23.84 0.00 42.66 2.92
819 835 6.605119 AGAACTTCCTTCCAAGAAATCAGAA 58.395 36.000 0.00 0.00 0.00 3.02
821 837 6.264067 ACAAGAACTTCCTTCCAAGAAATCAG 59.736 38.462 0.00 0.00 0.00 2.90
822 838 6.129179 ACAAGAACTTCCTTCCAAGAAATCA 58.871 36.000 0.00 0.00 0.00 2.57
823 839 6.641169 ACAAGAACTTCCTTCCAAGAAATC 57.359 37.500 0.00 0.00 0.00 2.17
824 840 7.417911 GGAAACAAGAACTTCCTTCCAAGAAAT 60.418 37.037 14.32 0.00 38.48 2.17
862 878 3.853475 TCACATGCATCTGACTACACAG 58.147 45.455 0.00 0.00 39.02 3.66
928 955 2.045926 CCCTCCAACTTGCTCCCG 60.046 66.667 0.00 0.00 0.00 5.14
1054 1081 2.763215 GGCCATGGGTGTGGAGAA 59.237 61.111 15.13 0.00 42.02 2.87
1063 1090 4.899239 GAGACGAGCGGCCATGGG 62.899 72.222 15.13 0.00 0.00 4.00
1497 1524 1.203313 AGGTAAAGAGACTGGAGCCCA 60.203 52.381 0.00 0.00 0.00 5.36
1561 1588 2.408050 CGACTGAAGTTTCCTCAGGTG 58.592 52.381 4.96 0.00 35.93 4.00
1594 1621 1.503542 GCCCGCTCAAGTCATTGTG 59.496 57.895 0.00 0.00 37.68 3.33
1622 1649 0.029300 CGTGTTGTTGAACAGGCCAG 59.971 55.000 5.01 0.00 42.87 4.85
1653 1680 2.327343 CGACCCGAGACGTACCACA 61.327 63.158 0.00 0.00 0.00 4.17
1656 1683 1.135523 GTTCGACCCGAGACGTACC 59.864 63.158 0.00 0.00 37.14 3.34
1712 1739 2.876645 GCCACTCGAGCTTCGACG 60.877 66.667 13.61 0.00 44.82 5.12
1998 2033 1.608590 CTTGTGAGGTTCGGCATTGTT 59.391 47.619 0.00 0.00 0.00 2.83
2026 2061 2.030540 CAGTGAGGCCATTTGTTGACAG 60.031 50.000 5.01 0.00 0.00 3.51
2031 2066 2.380064 TTCCAGTGAGGCCATTTGTT 57.620 45.000 5.01 0.00 37.29 2.83
2499 2534 4.020543 TGGTAAGATTGGCAAATGTACCC 58.979 43.478 23.09 13.10 34.69 3.69
2565 2600 1.755179 CAGTGATTGGTGTGGGGATC 58.245 55.000 0.00 0.00 0.00 3.36
2640 2675 3.726557 AATCCACTGATTTCTGCTGGA 57.273 42.857 9.44 9.44 38.00 3.86
2668 2703 3.485394 TGTCAAGATGCAACTTAGCCAA 58.515 40.909 9.09 0.00 0.00 4.52
2701 2736 1.856629 CTGCTTGGAATGGGACCAAT 58.143 50.000 0.00 0.00 44.74 3.16
2722 2757 5.360144 TCTGTATCTGGCTTAGGTTACTGAC 59.640 44.000 0.00 0.00 0.00 3.51
2780 2815 5.069914 TGTCGCCATAGACTTGTTGGTATAT 59.930 40.000 0.00 0.00 41.47 0.86
2781 2816 4.403113 TGTCGCCATAGACTTGTTGGTATA 59.597 41.667 0.00 0.00 41.47 1.47
2802 2837 8.947055 AATCAAGCTCAATTAGTTTTTGTTGT 57.053 26.923 0.00 0.00 0.00 3.32
2857 2892 3.056035 GTCAGTTTCCCTACATCTTCCGT 60.056 47.826 0.00 0.00 0.00 4.69
2893 2928 2.547218 GCTGGTTACTCGACAAGTCCAA 60.547 50.000 0.00 0.00 39.55 3.53
2899 2934 3.130516 CCTGATAGCTGGTTACTCGACAA 59.869 47.826 0.00 0.00 0.00 3.18
2922 2957 3.744660 GCCGAATGAAGTTGGGATATCT 58.255 45.455 2.05 0.00 37.87 1.98
2947 2982 6.998673 AGATTCAGATTGATCATCATCTGCAA 59.001 34.615 23.95 19.65 40.07 4.08
3066 3101 0.378257 CCAATGACTTCGGAATGGCG 59.622 55.000 0.00 0.00 0.00 5.69
3103 3138 2.777692 TGAAAGAGAGGTTCAGGTTGGT 59.222 45.455 0.00 0.00 31.45 3.67
3163 3198 5.539574 TCAATGATTTGAAGGTGATGTTGGT 59.460 36.000 0.00 0.00 38.90 3.67
3175 3210 7.093421 TGCACTATTTCCCATCAATGATTTGAA 60.093 33.333 0.00 0.00 44.70 2.69
3178 3213 6.381994 AGTGCACTATTTCCCATCAATGATTT 59.618 34.615 20.16 0.00 0.00 2.17
3195 3230 0.321671 GAAGGCCACAGAGTGCACTA 59.678 55.000 21.73 0.00 31.34 2.74
3220 3255 0.472044 TGGCATGGCGCTATTCCTAA 59.528 50.000 21.77 1.22 41.91 2.69
3221 3256 0.472044 TTGGCATGGCGCTATTCCTA 59.528 50.000 21.77 12.79 41.91 2.94
3240 3275 3.417101 TGACCTTGAGTGTGTGTTGTTT 58.583 40.909 0.00 0.00 0.00 2.83
3336 3371 9.171877 CCTTGCTTATTCATCTTTCTTCTAACT 57.828 33.333 0.00 0.00 0.00 2.24
3375 3410 2.741878 CGTCAAGTCTGTGTTTGAGGGT 60.742 50.000 0.00 0.00 36.23 4.34
3772 3813 0.460284 CGGTGATGCAGGTACTCCAC 60.460 60.000 0.00 0.00 34.60 4.02
3780 3821 2.360350 AAGTGCCGGTGATGCAGG 60.360 61.111 1.90 0.00 39.87 4.85
4182 4223 2.821378 CAGTTCACATGGGAATGCTTGA 59.179 45.455 14.71 0.00 0.00 3.02
4193 4234 3.873361 AGTGACACTTGACAGTTCACATG 59.127 43.478 1.07 0.00 40.21 3.21
4196 4237 3.307242 GTCAGTGACACTTGACAGTTCAC 59.693 47.826 18.54 4.02 39.21 3.18
4203 4244 3.661745 ACGGTCAGTGACACTTGAC 57.338 52.632 24.20 20.74 33.68 3.18
4291 4332 4.695928 GGACACCAGGAAAGTATTCAAGAC 59.304 45.833 0.00 0.00 37.29 3.01
4318 4359 1.197036 GCAAACTAAGCCCAACTCGAC 59.803 52.381 0.00 0.00 0.00 4.20
4383 4424 8.908786 TTGACTTGATCTTGTTTAATCTGACT 57.091 30.769 0.00 0.00 0.00 3.41
4392 4433 9.736023 GAACAGTAATTTGACTTGATCTTGTTT 57.264 29.630 0.00 0.00 0.00 2.83
4461 4510 2.282290 CGTTTGCTGGTGCTTTTTCTTG 59.718 45.455 0.00 0.00 40.48 3.02
4477 4526 5.920273 AGAATTTATGTTGTTGCTCCGTTTG 59.080 36.000 0.00 0.00 0.00 2.93
4556 4605 7.045126 AGGTGAACAGAGAGCAACTATATAC 57.955 40.000 0.00 0.00 0.00 1.47
4593 4642 4.757019 TTGCATTGGATGGCATTACAAT 57.243 36.364 19.36 19.36 40.17 2.71
4594 4643 4.548451 TTTGCATTGGATGGCATTACAA 57.452 36.364 17.13 17.13 40.17 2.41
4595 4644 4.757019 ATTTGCATTGGATGGCATTACA 57.243 36.364 0.00 1.10 40.17 2.41
4596 4645 5.870978 GGATATTTGCATTGGATGGCATTAC 59.129 40.000 0.00 0.00 40.17 1.89
4597 4646 5.046448 GGGATATTTGCATTGGATGGCATTA 60.046 40.000 0.00 0.00 40.17 1.90
4598 4647 4.263156 GGGATATTTGCATTGGATGGCATT 60.263 41.667 0.00 0.00 40.17 3.56
4599 4648 3.262405 GGGATATTTGCATTGGATGGCAT 59.738 43.478 0.00 0.00 40.17 4.40
4600 4649 2.633967 GGGATATTTGCATTGGATGGCA 59.366 45.455 0.00 0.00 38.46 4.92
4601 4650 2.633967 TGGGATATTTGCATTGGATGGC 59.366 45.455 0.00 0.00 0.00 4.40
4602 4651 5.012251 TGAATGGGATATTTGCATTGGATGG 59.988 40.000 0.00 0.00 0.00 3.51
4603 4652 5.929992 GTGAATGGGATATTTGCATTGGATG 59.070 40.000 0.00 0.00 0.00 3.51
4604 4653 5.603395 TGTGAATGGGATATTTGCATTGGAT 59.397 36.000 0.00 0.00 0.00 3.41
4605 4654 4.961099 TGTGAATGGGATATTTGCATTGGA 59.039 37.500 0.00 0.00 0.00 3.53
4606 4655 5.279255 TGTGAATGGGATATTTGCATTGG 57.721 39.130 0.00 0.00 0.00 3.16
4607 4656 4.748102 GCTGTGAATGGGATATTTGCATTG 59.252 41.667 0.00 0.00 0.00 2.82
4608 4657 4.500205 CGCTGTGAATGGGATATTTGCATT 60.500 41.667 0.00 0.00 0.00 3.56
4609 4658 3.005050 CGCTGTGAATGGGATATTTGCAT 59.995 43.478 0.00 0.00 0.00 3.96
4610 4659 2.358582 CGCTGTGAATGGGATATTTGCA 59.641 45.455 0.00 0.00 0.00 4.08
4611 4660 2.358898 ACGCTGTGAATGGGATATTTGC 59.641 45.455 0.00 0.00 0.00 3.68
4612 4661 3.627123 TCACGCTGTGAATGGGATATTTG 59.373 43.478 8.59 0.00 39.78 2.32
4613 4662 3.884895 TCACGCTGTGAATGGGATATTT 58.115 40.909 8.59 0.00 39.78 1.40
4614 4663 3.558931 TCACGCTGTGAATGGGATATT 57.441 42.857 8.59 0.00 39.78 1.28
4615 4664 3.558931 TTCACGCTGTGAATGGGATAT 57.441 42.857 16.54 0.00 45.88 1.63
4617 4666 3.955145 TTCACGCTGTGAATGGGAT 57.045 47.368 16.54 0.00 45.88 3.85
4624 4673 3.965379 TTATAGGGTTTCACGCTGTGA 57.035 42.857 7.20 7.20 41.73 3.58
4625 4674 4.260212 CGATTTATAGGGTTTCACGCTGTG 60.260 45.833 3.83 2.79 41.73 3.66
4626 4675 3.869246 CGATTTATAGGGTTTCACGCTGT 59.131 43.478 3.83 0.04 41.73 4.40
4627 4676 3.869246 ACGATTTATAGGGTTTCACGCTG 59.131 43.478 3.83 0.00 41.73 5.18
4628 4677 4.117685 GACGATTTATAGGGTTTCACGCT 58.882 43.478 0.00 0.00 44.07 5.07
4629 4678 3.866910 TGACGATTTATAGGGTTTCACGC 59.133 43.478 0.00 0.00 0.00 5.34
4630 4679 5.107133 AGTGACGATTTATAGGGTTTCACG 58.893 41.667 0.00 0.00 37.72 4.35
4631 4680 6.183360 CCAAGTGACGATTTATAGGGTTTCAC 60.183 42.308 0.00 0.00 33.76 3.18
4632 4681 5.878116 CCAAGTGACGATTTATAGGGTTTCA 59.122 40.000 0.00 0.00 0.00 2.69
4633 4682 6.110707 TCCAAGTGACGATTTATAGGGTTTC 58.889 40.000 0.00 0.00 0.00 2.78
4634 4683 6.057321 TCCAAGTGACGATTTATAGGGTTT 57.943 37.500 0.00 0.00 0.00 3.27
4635 4684 5.671493 CTCCAAGTGACGATTTATAGGGTT 58.329 41.667 0.00 0.00 0.00 4.11
4636 4685 4.443034 GCTCCAAGTGACGATTTATAGGGT 60.443 45.833 0.00 0.00 0.00 4.34
4637 4686 4.058817 GCTCCAAGTGACGATTTATAGGG 58.941 47.826 0.00 0.00 0.00 3.53
4638 4687 3.736252 CGCTCCAAGTGACGATTTATAGG 59.264 47.826 0.00 0.00 0.00 2.57
4639 4688 3.182572 GCGCTCCAAGTGACGATTTATAG 59.817 47.826 0.00 0.00 0.00 1.31
4640 4689 3.120792 GCGCTCCAAGTGACGATTTATA 58.879 45.455 0.00 0.00 0.00 0.98
4641 4690 1.933853 GCGCTCCAAGTGACGATTTAT 59.066 47.619 0.00 0.00 0.00 1.40
4642 4691 1.337354 TGCGCTCCAAGTGACGATTTA 60.337 47.619 9.73 0.00 0.00 1.40
4643 4692 0.602638 TGCGCTCCAAGTGACGATTT 60.603 50.000 9.73 0.00 0.00 2.17
4644 4693 0.602638 TTGCGCTCCAAGTGACGATT 60.603 50.000 9.73 0.00 0.00 3.34
4645 4694 1.005037 TTGCGCTCCAAGTGACGAT 60.005 52.632 9.73 0.00 0.00 3.73
4646 4695 1.954146 GTTGCGCTCCAAGTGACGA 60.954 57.895 9.73 0.00 33.21 4.20
4647 4696 1.956170 AGTTGCGCTCCAAGTGACG 60.956 57.895 9.73 0.00 35.78 4.35
4648 4697 4.049393 AGTTGCGCTCCAAGTGAC 57.951 55.556 9.73 0.00 35.78 3.67
4651 4700 0.663153 GAAACAGTTGCGCTCCAAGT 59.337 50.000 9.73 0.00 37.58 3.16
4652 4701 0.947244 AGAAACAGTTGCGCTCCAAG 59.053 50.000 9.73 0.00 33.21 3.61
4653 4702 2.248280 TAGAAACAGTTGCGCTCCAA 57.752 45.000 9.73 0.00 0.00 3.53
4654 4703 2.346803 GATAGAAACAGTTGCGCTCCA 58.653 47.619 9.73 0.00 0.00 3.86
4655 4704 1.324736 CGATAGAAACAGTTGCGCTCC 59.675 52.381 9.73 0.00 39.76 4.70
4656 4705 1.324736 CCGATAGAAACAGTTGCGCTC 59.675 52.381 9.73 1.40 39.76 5.03
4657 4706 1.067142 TCCGATAGAAACAGTTGCGCT 60.067 47.619 9.73 0.00 39.76 5.92
4658 4707 1.324736 CTCCGATAGAAACAGTTGCGC 59.675 52.381 0.00 0.00 39.76 6.09
4659 4708 1.324736 GCTCCGATAGAAACAGTTGCG 59.675 52.381 0.00 0.00 39.76 4.85
4660 4709 1.324736 CGCTCCGATAGAAACAGTTGC 59.675 52.381 0.00 0.00 39.76 4.17
4661 4710 1.927174 CCGCTCCGATAGAAACAGTTG 59.073 52.381 0.00 0.00 39.76 3.16
4662 4711 1.739371 GCCGCTCCGATAGAAACAGTT 60.739 52.381 0.00 0.00 39.76 3.16
4663 4712 0.179108 GCCGCTCCGATAGAAACAGT 60.179 55.000 0.00 0.00 39.76 3.55
4664 4713 0.103208 AGCCGCTCCGATAGAAACAG 59.897 55.000 0.00 0.00 39.76 3.16
4690 4878 0.977395 ACACTGGTTAGCAGTCCTCC 59.023 55.000 14.55 0.00 0.00 4.30
4696 4884 2.484264 GCCTTAACACACTGGTTAGCAG 59.516 50.000 10.09 10.09 34.92 4.24
4698 4886 2.500229 TGCCTTAACACACTGGTTAGC 58.500 47.619 0.00 0.00 34.92 3.09
4739 8849 1.649664 AGCTGAACACATCGCTCATC 58.350 50.000 0.00 0.00 34.35 2.92
4775 8885 3.071747 GTCTTTTCCCTGTGAAGACCTCT 59.928 47.826 4.55 0.00 42.00 3.69
4804 8914 1.115467 CTCCTCATAGAACAGCGGGT 58.885 55.000 0.00 0.00 0.00 5.28
4815 8925 0.103755 CGCAAGCTGAGCTCCTCATA 59.896 55.000 7.72 0.00 39.92 2.15
4816 8926 1.153409 CGCAAGCTGAGCTCCTCAT 60.153 57.895 7.72 0.00 39.92 2.90
4889 8999 4.755411 TCTTGATTCCGTGTGATAGAACC 58.245 43.478 0.00 0.00 0.00 3.62
4924 9034 0.736636 CGATGTGCTGTCATTGCCAT 59.263 50.000 0.00 0.00 0.00 4.40
4929 9039 2.738000 GCTCTCTCGATGTGCTGTCATT 60.738 50.000 0.00 0.00 0.00 2.57
4934 9044 0.173029 ACTGCTCTCTCGATGTGCTG 59.827 55.000 13.58 13.58 0.00 4.41
4994 9104 3.740832 TCGTTGATGAGCACTGTAAACTG 59.259 43.478 0.00 0.00 0.00 3.16
5018 9128 3.379372 CCATTGCGGTTCTTTCATCAGAT 59.621 43.478 0.00 0.00 0.00 2.90
5019 9129 2.749076 CCATTGCGGTTCTTTCATCAGA 59.251 45.455 0.00 0.00 0.00 3.27
5103 9213 1.308998 CAGAAGGTGGTTTTGCTCGT 58.691 50.000 0.00 0.00 0.00 4.18
5117 9227 5.616424 GCGATATGATAGCAAAAGCCAGAAG 60.616 44.000 0.00 0.00 0.00 2.85
5118 9228 4.214119 GCGATATGATAGCAAAAGCCAGAA 59.786 41.667 0.00 0.00 0.00 3.02
5119 9229 3.748048 GCGATATGATAGCAAAAGCCAGA 59.252 43.478 0.00 0.00 0.00 3.86
5120 9230 3.120060 GGCGATATGATAGCAAAAGCCAG 60.120 47.826 12.94 0.00 41.46 4.85
5121 9231 2.813754 GGCGATATGATAGCAAAAGCCA 59.186 45.455 12.94 0.00 41.46 4.75
5122 9232 3.077359 AGGCGATATGATAGCAAAAGCC 58.923 45.455 10.74 10.74 42.09 4.35
5123 9233 3.120060 CCAGGCGATATGATAGCAAAAGC 60.120 47.826 0.00 0.00 32.10 3.51
5127 9237 3.070878 TGTTCCAGGCGATATGATAGCAA 59.929 43.478 0.00 0.00 32.10 3.91
5140 9250 2.323968 GAGGATCTTCTGTTCCAGGC 57.676 55.000 0.00 0.00 35.14 4.85
5157 9267 9.622004 TTATTGTCGTTAACTCAAGAAGTAGAG 57.378 33.333 14.81 0.00 37.17 2.43
5220 9334 4.671377 ACAAGTTATACAATTGGCGCATG 58.329 39.130 10.83 4.85 0.00 4.06
5242 9358 8.762645 AGATTATTGACCATCTGTTACAGAGAA 58.237 33.333 20.12 8.23 44.08 2.87
5244 9360 9.469807 GTAGATTATTGACCATCTGTTACAGAG 57.530 37.037 20.12 10.25 44.08 3.35
5246 9362 9.469807 GAGTAGATTATTGACCATCTGTTACAG 57.530 37.037 5.94 5.94 31.89 2.74
5247 9363 8.421784 GGAGTAGATTATTGACCATCTGTTACA 58.578 37.037 0.00 0.00 31.89 2.41
5262 9378 7.427989 TTTGTTTACGGAGGGAGTAGATTAT 57.572 36.000 0.00 0.00 0.00 1.28
5267 9383 8.636213 TCTTATATTTGTTTACGGAGGGAGTAG 58.364 37.037 0.00 0.00 0.00 2.57
5272 9388 6.044682 ACGTCTTATATTTGTTTACGGAGGG 58.955 40.000 0.00 0.00 33.44 4.30
5273 9389 7.529880 AACGTCTTATATTTGTTTACGGAGG 57.470 36.000 0.00 0.00 33.44 4.30
5289 9405 9.754382 ACAACTTTAGTGATCTAAAACGTCTTA 57.246 29.630 0.00 0.00 42.97 2.10
5290 9406 8.658499 ACAACTTTAGTGATCTAAAACGTCTT 57.342 30.769 0.00 0.00 42.97 3.01
5291 9407 9.754382 TTACAACTTTAGTGATCTAAAACGTCT 57.246 29.630 0.00 0.00 42.97 4.18
5300 9416 9.778741 TTGATCTGTTTACAACTTTAGTGATCT 57.221 29.630 0.00 0.00 0.00 2.75
5303 9419 8.289618 GCATTGATCTGTTTACAACTTTAGTGA 58.710 33.333 0.00 0.00 0.00 3.41
5304 9420 8.075574 TGCATTGATCTGTTTACAACTTTAGTG 58.924 33.333 0.00 0.00 0.00 2.74
5305 9421 8.165239 TGCATTGATCTGTTTACAACTTTAGT 57.835 30.769 0.00 0.00 0.00 2.24
5306 9422 8.292448 ACTGCATTGATCTGTTTACAACTTTAG 58.708 33.333 0.00 0.00 0.00 1.85
5307 9423 8.165239 ACTGCATTGATCTGTTTACAACTTTA 57.835 30.769 0.00 0.00 0.00 1.85
5308 9424 7.013655 AGACTGCATTGATCTGTTTACAACTTT 59.986 33.333 0.00 0.00 0.00 2.66
5309 9425 6.488006 AGACTGCATTGATCTGTTTACAACTT 59.512 34.615 0.00 0.00 0.00 2.66
5310 9426 6.000219 AGACTGCATTGATCTGTTTACAACT 59.000 36.000 0.00 0.00 0.00 3.16
5311 9427 6.082338 CAGACTGCATTGATCTGTTTACAAC 58.918 40.000 8.51 0.00 36.02 3.32
5312 9428 5.335113 GCAGACTGCATTGATCTGTTTACAA 60.335 40.000 22.62 0.00 44.26 2.41
5313 9429 4.154737 GCAGACTGCATTGATCTGTTTACA 59.845 41.667 22.62 0.00 44.26 2.41
5314 9430 4.656041 GCAGACTGCATTGATCTGTTTAC 58.344 43.478 22.62 0.00 44.26 2.01
5315 9431 4.952262 GCAGACTGCATTGATCTGTTTA 57.048 40.909 22.62 0.00 44.26 2.01
5316 9432 3.844577 GCAGACTGCATTGATCTGTTT 57.155 42.857 22.62 0.00 44.26 2.83
5328 9444 1.742761 TGCTTAATCCAGCAGACTGC 58.257 50.000 20.12 20.12 45.14 4.40
5335 9451 2.802816 CCTGTACGATGCTTAATCCAGC 59.197 50.000 0.00 0.00 40.55 4.85
5336 9452 4.322080 TCCTGTACGATGCTTAATCCAG 57.678 45.455 0.00 0.00 30.80 3.86
5337 9453 4.746535 TTCCTGTACGATGCTTAATCCA 57.253 40.909 0.00 0.00 30.80 3.41
5338 9454 5.116882 AGTTTCCTGTACGATGCTTAATCC 58.883 41.667 0.00 0.00 30.80 3.01
5339 9455 6.663944 AAGTTTCCTGTACGATGCTTAATC 57.336 37.500 0.00 0.00 0.00 1.75
5340 9456 7.769044 ACATAAGTTTCCTGTACGATGCTTAAT 59.231 33.333 0.00 0.00 0.00 1.40
5341 9457 7.101054 ACATAAGTTTCCTGTACGATGCTTAA 58.899 34.615 0.00 0.00 0.00 1.85
5342 9458 6.636705 ACATAAGTTTCCTGTACGATGCTTA 58.363 36.000 0.00 0.00 0.00 3.09
5343 9459 5.488341 ACATAAGTTTCCTGTACGATGCTT 58.512 37.500 0.00 0.00 0.00 3.91
5344 9460 5.086104 ACATAAGTTTCCTGTACGATGCT 57.914 39.130 0.00 0.00 0.00 3.79
5345 9461 5.350365 TGAACATAAGTTTCCTGTACGATGC 59.650 40.000 0.00 0.00 38.30 3.91
5346 9462 6.036083 CCTGAACATAAGTTTCCTGTACGATG 59.964 42.308 0.00 0.00 38.30 3.84
5347 9463 6.106673 CCTGAACATAAGTTTCCTGTACGAT 58.893 40.000 0.00 0.00 38.30 3.73
5348 9464 5.011329 ACCTGAACATAAGTTTCCTGTACGA 59.989 40.000 0.00 0.00 38.30 3.43
5349 9465 5.120208 CACCTGAACATAAGTTTCCTGTACG 59.880 44.000 0.00 0.00 38.30 3.67
5350 9466 5.995897 ACACCTGAACATAAGTTTCCTGTAC 59.004 40.000 0.00 0.00 38.30 2.90
5351 9467 6.182507 ACACCTGAACATAAGTTTCCTGTA 57.817 37.500 0.00 0.00 38.30 2.74
5352 9468 5.048846 ACACCTGAACATAAGTTTCCTGT 57.951 39.130 0.00 0.00 38.30 4.00
5353 9469 5.299279 ACAACACCTGAACATAAGTTTCCTG 59.701 40.000 0.00 0.00 38.30 3.86
5354 9470 5.445964 ACAACACCTGAACATAAGTTTCCT 58.554 37.500 0.00 0.00 38.30 3.36
5355 9471 5.767816 ACAACACCTGAACATAAGTTTCC 57.232 39.130 0.00 0.00 38.30 3.13
5356 9472 6.360329 CGTACAACACCTGAACATAAGTTTC 58.640 40.000 0.00 0.00 38.30 2.78
5357 9473 5.277634 GCGTACAACACCTGAACATAAGTTT 60.278 40.000 0.00 0.00 38.30 2.66
5358 9474 4.212636 GCGTACAACACCTGAACATAAGTT 59.787 41.667 0.00 0.00 41.64 2.66
5359 9475 3.744426 GCGTACAACACCTGAACATAAGT 59.256 43.478 0.00 0.00 0.00 2.24
5360 9476 3.743911 TGCGTACAACACCTGAACATAAG 59.256 43.478 0.00 0.00 0.00 1.73
5361 9477 3.495377 GTGCGTACAACACCTGAACATAA 59.505 43.478 0.00 0.00 31.67 1.90
5362 9478 3.061322 GTGCGTACAACACCTGAACATA 58.939 45.455 0.00 0.00 31.67 2.29
5363 9479 1.871039 GTGCGTACAACACCTGAACAT 59.129 47.619 0.00 0.00 31.67 2.71
5364 9480 1.292061 GTGCGTACAACACCTGAACA 58.708 50.000 0.00 0.00 31.67 3.18
5365 9481 1.260561 CTGTGCGTACAACACCTGAAC 59.739 52.381 7.96 0.00 37.22 3.18
5366 9482 1.134640 ACTGTGCGTACAACACCTGAA 60.135 47.619 7.96 0.00 37.22 3.02
5367 9483 0.462375 ACTGTGCGTACAACACCTGA 59.538 50.000 7.96 0.00 37.22 3.86
5368 9484 1.295792 AACTGTGCGTACAACACCTG 58.704 50.000 7.96 0.00 37.22 4.00
5369 9485 2.032680 AAACTGTGCGTACAACACCT 57.967 45.000 7.96 0.00 37.22 4.00
5370 9486 2.711885 GAAAACTGTGCGTACAACACC 58.288 47.619 7.96 0.00 37.22 4.16
5371 9487 2.222863 ACGAAAACTGTGCGTACAACAC 60.223 45.455 7.96 8.68 36.14 3.32
5372 9488 2.001159 ACGAAAACTGTGCGTACAACA 58.999 42.857 7.96 0.00 36.14 3.33
5373 9489 2.724744 ACGAAAACTGTGCGTACAAC 57.275 45.000 7.96 0.00 36.14 3.32
5374 9490 2.671888 TGAACGAAAACTGTGCGTACAA 59.328 40.909 7.96 0.00 37.26 2.41
5375 9491 2.269172 TGAACGAAAACTGTGCGTACA 58.731 42.857 6.10 6.10 37.26 2.90
5376 9492 2.348218 CCTGAACGAAAACTGTGCGTAC 60.348 50.000 0.00 0.00 37.26 3.67
5377 9493 1.862201 CCTGAACGAAAACTGTGCGTA 59.138 47.619 0.00 0.00 37.26 4.42
5378 9494 0.655733 CCTGAACGAAAACTGTGCGT 59.344 50.000 0.00 0.00 40.35 5.24
5379 9495 0.655733 ACCTGAACGAAAACTGTGCG 59.344 50.000 0.00 0.00 0.00 5.34
5380 9496 1.940613 AGACCTGAACGAAAACTGTGC 59.059 47.619 0.00 0.00 0.00 4.57
5381 9497 2.544267 GGAGACCTGAACGAAAACTGTG 59.456 50.000 0.00 0.00 0.00 3.66
5382 9498 2.835027 GGAGACCTGAACGAAAACTGT 58.165 47.619 0.00 0.00 0.00 3.55
5397 9513 2.725221 AGCAAATGGATCAGGGAGAC 57.275 50.000 0.00 0.00 0.00 3.36
5398 9514 3.782523 ACTAAGCAAATGGATCAGGGAGA 59.217 43.478 0.00 0.00 0.00 3.71
5399 9515 4.133078 GACTAAGCAAATGGATCAGGGAG 58.867 47.826 0.00 0.00 0.00 4.30
5400 9516 3.782523 AGACTAAGCAAATGGATCAGGGA 59.217 43.478 0.00 0.00 0.00 4.20
5401 9517 4.162040 AGACTAAGCAAATGGATCAGGG 57.838 45.455 0.00 0.00 0.00 4.45
5402 9518 7.814264 AATTAGACTAAGCAAATGGATCAGG 57.186 36.000 0.73 0.00 0.00 3.86
5403 9519 9.727627 GAAAATTAGACTAAGCAAATGGATCAG 57.272 33.333 0.73 0.00 0.00 2.90
5404 9520 9.466497 AGAAAATTAGACTAAGCAAATGGATCA 57.534 29.630 0.73 0.00 0.00 2.92
5407 9523 9.077885 ACAAGAAAATTAGACTAAGCAAATGGA 57.922 29.630 0.73 0.00 0.00 3.41
5408 9524 9.346725 GACAAGAAAATTAGACTAAGCAAATGG 57.653 33.333 0.73 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.