Multiple sequence alignment - TraesCS3D01G258800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G258800 chr3D 100.000 6329 0 0 1 6329 360700820 360694492 0.000000e+00 11688.0
1 TraesCS3D01G258800 chr3D 93.472 337 12 4 5160 5488 360636404 360636070 5.700000e-135 492.0
2 TraesCS3D01G258800 chr3A 93.607 2894 101 26 1886 4718 480441818 480438948 0.000000e+00 4242.0
3 TraesCS3D01G258800 chr3A 93.661 1057 26 12 603 1653 480442985 480441964 0.000000e+00 1543.0
4 TraesCS3D01G258800 chr3A 90.082 736 44 10 5025 5747 480438867 480438148 0.000000e+00 928.0
5 TraesCS3D01G258800 chr3A 95.455 88 3 1 4723 4809 480438978 480438891 8.560000e-29 139.0
6 TraesCS3D01G258800 chr3A 91.250 80 5 1 1712 1789 480441923 480441844 2.410000e-19 108.0
7 TraesCS3D01G258800 chr3B 97.455 1611 26 5 2129 3736 469638022 469636424 0.000000e+00 2734.0
8 TraesCS3D01G258800 chr3B 91.534 1571 46 27 603 2134 469646113 469644591 0.000000e+00 2084.0
9 TraesCS3D01G258800 chr3B 97.731 1102 19 4 3730 4830 469636325 469635229 0.000000e+00 1892.0
10 TraesCS3D01G258800 chr3B 95.138 905 30 8 5111 6004 469635044 469634143 0.000000e+00 1415.0
11 TraesCS3D01G258800 chr3B 94.012 334 15 2 5160 5488 469342406 469342073 9.470000e-138 501.0
12 TraesCS3D01G258800 chr3B 94.241 191 8 3 4813 5003 621150026 621150213 8.030000e-74 289.0
13 TraesCS3D01G258800 chr3B 82.203 118 4 6 4992 5109 469635230 469635130 1.130000e-12 86.1
14 TraesCS3D01G258800 chr1D 94.140 529 21 6 1 526 450511146 450510625 0.000000e+00 797.0
15 TraesCS3D01G258800 chr1D 98.837 172 2 0 4824 4995 238940211 238940382 2.220000e-79 307.0
16 TraesCS3D01G258800 chr1D 96.739 184 5 1 4814 4996 178466290 178466473 7.970000e-79 305.0
17 TraesCS3D01G258800 chr7D 92.857 532 25 7 1 529 576659767 576659246 0.000000e+00 760.0
18 TraesCS3D01G258800 chr7D 90.566 530 39 6 1 526 194789792 194790314 0.000000e+00 691.0
19 TraesCS3D01G258800 chr2D 91.589 535 31 11 1 530 590804405 590803880 0.000000e+00 726.0
20 TraesCS3D01G258800 chr2D 94.737 190 7 3 4819 5007 33902161 33902348 6.210000e-75 292.0
21 TraesCS3D01G258800 chr4D 91.370 533 35 7 1 530 77312315 77311791 0.000000e+00 719.0
22 TraesCS3D01G258800 chr4D 90.689 537 38 10 1 531 308810559 308810029 0.000000e+00 704.0
23 TraesCS3D01G258800 chr4D 98.305 177 2 1 4820 4996 75782045 75782220 6.160000e-80 309.0
24 TraesCS3D01G258800 chr4D 98.824 170 2 0 4829 4998 93338206 93338037 2.870000e-78 303.0
25 TraesCS3D01G258800 chr5D 91.098 528 38 6 1 526 458758216 458758736 0.000000e+00 706.0
26 TraesCS3D01G258800 chr5D 91.082 527 35 7 1 526 249909701 249910216 0.000000e+00 702.0
27 TraesCS3D01G258800 chr7A 88.469 529 50 10 1 525 733959132 733959653 4.160000e-176 628.0
28 TraesCS3D01G258800 chr6D 97.740 177 2 2 4825 5001 392897143 392896969 2.870000e-78 303.0
29 TraesCS3D01G258800 chr7B 93.782 193 8 3 4829 5020 427701766 427701955 2.890000e-73 287.0
30 TraesCS3D01G258800 chr7B 97.222 36 1 0 6274 6309 713109461 713109426 1.910000e-05 62.1
31 TraesCS3D01G258800 chr1B 92.040 201 11 5 4799 4996 676066395 676066197 1.740000e-70 278.0
32 TraesCS3D01G258800 chr6B 84.049 163 17 5 6090 6245 87724245 87724405 1.420000e-31 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G258800 chr3D 360694492 360700820 6328 True 11688.000 11688 100.00000 1 6329 1 chr3D.!!$R2 6328
1 TraesCS3D01G258800 chr3A 480438148 480442985 4837 True 1392.000 4242 92.81100 603 5747 5 chr3A.!!$R1 5144
2 TraesCS3D01G258800 chr3B 469644591 469646113 1522 True 2084.000 2084 91.53400 603 2134 1 chr3B.!!$R2 1531
3 TraesCS3D01G258800 chr3B 469634143 469638022 3879 True 1531.775 2734 93.13175 2129 6004 4 chr3B.!!$R3 3875
4 TraesCS3D01G258800 chr1D 450510625 450511146 521 True 797.000 797 94.14000 1 526 1 chr1D.!!$R1 525
5 TraesCS3D01G258800 chr7D 576659246 576659767 521 True 760.000 760 92.85700 1 529 1 chr7D.!!$R1 528
6 TraesCS3D01G258800 chr7D 194789792 194790314 522 False 691.000 691 90.56600 1 526 1 chr7D.!!$F1 525
7 TraesCS3D01G258800 chr2D 590803880 590804405 525 True 726.000 726 91.58900 1 530 1 chr2D.!!$R1 529
8 TraesCS3D01G258800 chr4D 77311791 77312315 524 True 719.000 719 91.37000 1 530 1 chr4D.!!$R1 529
9 TraesCS3D01G258800 chr4D 308810029 308810559 530 True 704.000 704 90.68900 1 531 1 chr4D.!!$R3 530
10 TraesCS3D01G258800 chr5D 458758216 458758736 520 False 706.000 706 91.09800 1 526 1 chr5D.!!$F2 525
11 TraesCS3D01G258800 chr5D 249909701 249910216 515 False 702.000 702 91.08200 1 526 1 chr5D.!!$F1 525
12 TraesCS3D01G258800 chr7A 733959132 733959653 521 False 628.000 628 88.46900 1 525 1 chr7A.!!$F1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
545 558 0.026027 CTAGACCACGCGTCGTAGTC 59.974 60.000 9.86 14.24 45.61 2.59 F
555 568 1.012086 CGTCGTAGTCGGATCTCCAA 58.988 55.000 0.00 0.00 35.06 3.53 F
556 569 1.399440 CGTCGTAGTCGGATCTCCAAA 59.601 52.381 0.00 0.00 35.06 3.28 F
1685 1735 1.468736 GGTAGCGATCTCGTTCCGTTT 60.469 52.381 1.14 0.00 42.22 3.60 F
1686 1736 2.257034 GTAGCGATCTCGTTCCGTTTT 58.743 47.619 1.14 0.00 42.22 2.43 F
2528 2609 2.892215 TCTTGTGATTGCATGGCTTTCA 59.108 40.909 0.00 0.00 0.00 2.69 F
2957 3039 2.358957 TGTGCTGCAGTGATTATGTCC 58.641 47.619 16.64 0.00 0.00 4.02 F
3459 3555 3.610911 AGGTTGCTATGCAGTTTACTCC 58.389 45.455 0.00 0.00 40.61 3.85 F
5016 5243 1.289160 TCTTGCAGATGGCTTACCCT 58.711 50.000 0.00 0.00 45.15 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1923 1985 1.444250 GATGTTATCCCCGCGGTGA 59.556 57.895 26.12 20.42 0.0 4.02 R
2075 2154 2.103771 TCTCTCAGCTTGGGCATGTATC 59.896 50.000 0.00 0.00 41.7 2.24 R
2335 2415 6.245408 TGGGAAGTTGCAAAGTAACATATCT 58.755 36.000 0.00 0.00 0.0 1.98 R
2955 3037 2.158885 TCATGGGATAAATTGTCGCGGA 60.159 45.455 6.13 0.00 0.0 5.54 R
2957 3039 2.872245 AGTCATGGGATAAATTGTCGCG 59.128 45.455 0.00 0.00 0.0 5.87 R
4050 4254 2.044492 ACTTCCCTGTGAGTATGGAGGA 59.956 50.000 0.00 0.00 0.0 3.71 R
4929 5156 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.0 4.26 R
5217 5528 3.192422 TGGCAAATAAGAAACATGGGACG 59.808 43.478 0.00 0.00 0.0 4.79 R
6292 6625 0.036294 GTAGAAAGTGCCCTTCCGCT 60.036 55.000 0.00 0.00 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 2.203126 CCCTGAAGATGGCGAGGC 60.203 66.667 0.00 0.00 0.00 4.70
115 116 4.194720 CCGCGACGAAGGAGGAGG 62.195 72.222 8.23 0.00 0.00 4.30
116 117 3.132139 CGCGACGAAGGAGGAGGA 61.132 66.667 0.00 0.00 0.00 3.71
144 145 3.978867 GAGGACAGCGACGACGACG 62.979 68.421 15.13 15.13 42.66 5.12
145 146 4.081030 GGACAGCGACGACGACGA 62.081 66.667 22.94 0.00 42.66 4.20
146 147 2.864248 GACAGCGACGACGACGAC 60.864 66.667 22.94 13.66 42.66 4.34
233 240 2.490685 GAGGAGAAGCCCGACGAC 59.509 66.667 0.00 0.00 37.37 4.34
234 241 3.398353 GAGGAGAAGCCCGACGACG 62.398 68.421 0.00 0.00 37.37 5.12
235 242 3.437795 GGAGAAGCCCGACGACGA 61.438 66.667 9.28 0.00 42.66 4.20
236 243 2.202453 GAGAAGCCCGACGACGAC 60.202 66.667 9.28 0.22 42.66 4.34
299 306 2.605580 CGCCTTCAGCCAGTTTCTTTTC 60.606 50.000 0.00 0.00 38.78 2.29
363 371 1.745232 ATATTTGCCGAACTTCGCCA 58.255 45.000 5.61 0.00 38.82 5.69
422 430 4.758251 CGCATGTGTCGGCCCTGA 62.758 66.667 0.00 0.00 0.00 3.86
504 517 0.454452 CGTTTTTAGGCGCTCCTTGC 60.454 55.000 7.64 0.00 40.66 4.01
535 548 0.671251 GGAGATGCTCCTAGACCACG 59.329 60.000 6.23 0.00 46.41 4.94
536 549 0.031449 GAGATGCTCCTAGACCACGC 59.969 60.000 0.00 0.00 0.00 5.34
537 550 1.299468 GATGCTCCTAGACCACGCG 60.299 63.158 3.53 3.53 0.00 6.01
538 551 2.005960 GATGCTCCTAGACCACGCGT 62.006 60.000 5.58 5.58 0.00 6.01
539 552 2.005960 ATGCTCCTAGACCACGCGTC 62.006 60.000 9.86 0.00 42.32 5.19
540 553 2.403987 CTCCTAGACCACGCGTCG 59.596 66.667 9.86 5.15 46.92 5.12
541 554 2.359107 TCCTAGACCACGCGTCGT 60.359 61.111 9.89 9.89 46.92 4.34
542 555 1.079197 TCCTAGACCACGCGTCGTA 60.079 57.895 9.86 0.00 46.92 3.43
543 556 1.086067 TCCTAGACCACGCGTCGTAG 61.086 60.000 9.86 3.98 46.92 3.51
544 557 1.364626 CCTAGACCACGCGTCGTAGT 61.365 60.000 9.86 4.31 46.92 2.73
545 558 0.026027 CTAGACCACGCGTCGTAGTC 59.974 60.000 9.86 14.24 45.61 2.59
546 559 2.572647 GACCACGCGTCGTAGTCG 60.573 66.667 9.86 0.00 38.46 4.18
547 560 3.989566 GACCACGCGTCGTAGTCGG 62.990 68.421 9.86 8.63 38.46 4.79
548 561 3.792047 CCACGCGTCGTAGTCGGA 61.792 66.667 9.86 0.00 38.32 4.55
549 562 2.402388 CACGCGTCGTAGTCGGAT 59.598 61.111 9.86 0.00 38.32 4.18
550 563 1.650536 CACGCGTCGTAGTCGGATC 60.651 63.158 9.86 0.00 38.32 3.36
551 564 1.812922 ACGCGTCGTAGTCGGATCT 60.813 57.895 5.58 0.00 38.73 2.75
552 565 1.083529 CGCGTCGTAGTCGGATCTC 60.084 63.158 0.00 0.00 39.83 2.75
553 566 1.279238 GCGTCGTAGTCGGATCTCC 59.721 63.158 0.00 0.00 39.83 3.71
554 567 1.434622 GCGTCGTAGTCGGATCTCCA 61.435 60.000 0.00 0.00 39.83 3.86
555 568 1.012086 CGTCGTAGTCGGATCTCCAA 58.988 55.000 0.00 0.00 35.06 3.53
556 569 1.399440 CGTCGTAGTCGGATCTCCAAA 59.601 52.381 0.00 0.00 35.06 3.28
557 570 2.033049 CGTCGTAGTCGGATCTCCAAAT 59.967 50.000 0.00 0.00 35.06 2.32
558 571 3.630101 GTCGTAGTCGGATCTCCAAATC 58.370 50.000 0.00 0.00 37.69 2.17
559 572 2.621998 TCGTAGTCGGATCTCCAAATCC 59.378 50.000 0.00 0.00 41.63 3.01
560 573 2.361119 CGTAGTCGGATCTCCAAATCCA 59.639 50.000 3.98 0.00 44.73 3.41
561 574 3.181479 CGTAGTCGGATCTCCAAATCCAA 60.181 47.826 3.98 0.00 44.73 3.53
562 575 3.550437 AGTCGGATCTCCAAATCCAAG 57.450 47.619 3.98 0.00 44.73 3.61
563 576 3.107601 AGTCGGATCTCCAAATCCAAGA 58.892 45.455 3.98 0.00 44.73 3.02
564 577 3.519510 AGTCGGATCTCCAAATCCAAGAA 59.480 43.478 3.98 0.00 44.73 2.52
565 578 3.623510 GTCGGATCTCCAAATCCAAGAAC 59.376 47.826 3.98 0.00 44.73 3.01
566 579 3.519510 TCGGATCTCCAAATCCAAGAACT 59.480 43.478 3.98 0.00 44.73 3.01
567 580 3.873952 CGGATCTCCAAATCCAAGAACTC 59.126 47.826 3.98 0.00 44.73 3.01
568 581 4.623886 CGGATCTCCAAATCCAAGAACTCA 60.624 45.833 3.98 0.00 44.73 3.41
569 582 5.444176 GGATCTCCAAATCCAAGAACTCAT 58.556 41.667 0.00 0.00 44.04 2.90
570 583 5.890419 GGATCTCCAAATCCAAGAACTCATT 59.110 40.000 0.00 0.00 44.04 2.57
571 584 6.039159 GGATCTCCAAATCCAAGAACTCATTC 59.961 42.308 0.00 0.00 44.04 2.67
572 585 4.937620 TCTCCAAATCCAAGAACTCATTCG 59.062 41.667 0.00 0.00 40.04 3.34
573 586 4.905429 TCCAAATCCAAGAACTCATTCGA 58.095 39.130 0.00 0.00 40.04 3.71
574 587 5.312895 TCCAAATCCAAGAACTCATTCGAA 58.687 37.500 0.00 0.00 40.04 3.71
575 588 5.767665 TCCAAATCCAAGAACTCATTCGAAA 59.232 36.000 0.00 0.00 40.04 3.46
576 589 6.264292 TCCAAATCCAAGAACTCATTCGAAAA 59.736 34.615 0.00 0.00 40.04 2.29
577 590 6.363357 CCAAATCCAAGAACTCATTCGAAAAC 59.637 38.462 0.00 0.00 40.04 2.43
578 591 6.633500 AATCCAAGAACTCATTCGAAAACA 57.367 33.333 0.00 0.00 40.04 2.83
579 592 6.633500 ATCCAAGAACTCATTCGAAAACAA 57.367 33.333 0.00 0.00 40.04 2.83
580 593 6.443934 TCCAAGAACTCATTCGAAAACAAA 57.556 33.333 0.00 0.00 40.04 2.83
581 594 6.857956 TCCAAGAACTCATTCGAAAACAAAA 58.142 32.000 0.00 0.00 40.04 2.44
582 595 7.488322 TCCAAGAACTCATTCGAAAACAAAAT 58.512 30.769 0.00 0.00 40.04 1.82
583 596 7.434897 TCCAAGAACTCATTCGAAAACAAAATG 59.565 33.333 0.00 0.00 40.04 2.32
584 597 7.222611 CCAAGAACTCATTCGAAAACAAAATGT 59.777 33.333 0.00 0.00 40.04 2.71
585 598 8.594687 CAAGAACTCATTCGAAAACAAAATGTT 58.405 29.630 0.00 0.00 40.09 2.71
586 599 9.796120 AAGAACTCATTCGAAAACAAAATGTTA 57.204 25.926 0.00 0.00 38.61 2.41
587 600 9.965824 AGAACTCATTCGAAAACAAAATGTTAT 57.034 25.926 0.00 0.00 38.61 1.89
589 602 9.965824 AACTCATTCGAAAACAAAATGTTATCT 57.034 25.926 0.00 0.00 40.14 1.98
590 603 9.612620 ACTCATTCGAAAACAAAATGTTATCTC 57.387 29.630 0.00 0.00 40.14 2.75
591 604 9.611284 CTCATTCGAAAACAAAATGTTATCTCA 57.389 29.630 0.00 0.00 40.14 3.27
592 605 9.393249 TCATTCGAAAACAAAATGTTATCTCAC 57.607 29.630 0.00 0.00 40.14 3.51
593 606 9.179552 CATTCGAAAACAAAATGTTATCTCACA 57.820 29.630 0.00 0.00 40.14 3.58
594 607 8.781067 TTCGAAAACAAAATGTTATCTCACAG 57.219 30.769 0.00 0.00 40.14 3.66
595 608 6.855914 TCGAAAACAAAATGTTATCTCACAGC 59.144 34.615 0.00 0.00 40.14 4.40
596 609 6.636447 CGAAAACAAAATGTTATCTCACAGCA 59.364 34.615 0.00 0.00 40.14 4.41
597 610 7.357532 CGAAAACAAAATGTTATCTCACAGCAC 60.358 37.037 0.00 0.00 40.14 4.40
598 611 5.376854 ACAAAATGTTATCTCACAGCACC 57.623 39.130 0.00 0.00 0.00 5.01
599 612 5.072741 ACAAAATGTTATCTCACAGCACCT 58.927 37.500 0.00 0.00 0.00 4.00
600 613 5.182001 ACAAAATGTTATCTCACAGCACCTC 59.818 40.000 0.00 0.00 0.00 3.85
601 614 3.550437 ATGTTATCTCACAGCACCTCC 57.450 47.619 0.00 0.00 0.00 4.30
637 650 2.363975 CCCAACGCCCCTACAGCTA 61.364 63.158 0.00 0.00 0.00 3.32
803 816 3.419759 GTAACACGGCGCCACCAG 61.420 66.667 28.98 12.87 39.03 4.00
843 857 4.477975 CGTCGCGTCCTCTCCACC 62.478 72.222 5.77 0.00 0.00 4.61
927 946 2.280552 ACGCCGCCTTCTAACTCCA 61.281 57.895 0.00 0.00 0.00 3.86
1670 1720 3.041508 ACTGTTTTCTTCGGAGGTAGC 57.958 47.619 0.00 0.00 0.00 3.58
1685 1735 1.468736 GGTAGCGATCTCGTTCCGTTT 60.469 52.381 1.14 0.00 42.22 3.60
1686 1736 2.257034 GTAGCGATCTCGTTCCGTTTT 58.743 47.619 1.14 0.00 42.22 2.43
1710 1760 6.627395 TTCGCATAATAAATGTTACAGGGG 57.373 37.500 0.00 0.00 0.00 4.79
1717 1767 9.744468 CATAATAAATGTTACAGGGGCTTAAAC 57.256 33.333 0.00 0.00 0.00 2.01
1729 1789 4.042934 AGGGGCTTAAACTGTAGTTGTCAT 59.957 41.667 0.00 0.00 38.44 3.06
1884 1946 3.516615 GGTAGTCTTCTGAGTGATGCAC 58.483 50.000 0.00 0.00 34.10 4.57
1923 1985 4.263462 TGTTGTGGTGCTTATTCAGAGGAT 60.263 41.667 0.00 0.00 0.00 3.24
1971 2033 3.141398 TCGGAAATTGCTAGATGATGGC 58.859 45.455 0.00 0.00 35.58 4.40
2528 2609 2.892215 TCTTGTGATTGCATGGCTTTCA 59.108 40.909 0.00 0.00 0.00 2.69
2682 2763 9.595823 GTATTCAGAAAGCATTGTAAGGTAGTA 57.404 33.333 0.00 0.00 0.00 1.82
2690 2771 6.765403 AGCATTGTAAGGTAGTAGTTGTTCA 58.235 36.000 0.00 0.00 0.00 3.18
2955 3037 6.205464 GGTTATATGTGCTGCAGTGATTATGT 59.795 38.462 16.64 4.64 0.00 2.29
2957 3039 2.358957 TGTGCTGCAGTGATTATGTCC 58.641 47.619 16.64 0.00 0.00 4.02
3035 3124 5.357742 TGGATAAGTGTGATGTAGCATGT 57.642 39.130 0.00 0.00 0.00 3.21
3130 3219 4.201940 CCGCATTTACATTTGATCAGCAGA 60.202 41.667 0.00 0.00 0.00 4.26
3459 3555 3.610911 AGGTTGCTATGCAGTTTACTCC 58.389 45.455 0.00 0.00 40.61 3.85
3938 4140 9.503427 GATCCCTGAAATTTAATGTTCTTTACG 57.497 33.333 0.00 0.00 0.00 3.18
4006 4210 4.703645 TCAGAGACGACTAGGATTTGTG 57.296 45.455 0.00 0.00 0.00 3.33
4041 4245 6.485171 AGCAGATATTGGTAAGGTTCAGTTT 58.515 36.000 0.00 0.00 35.30 2.66
4050 4254 5.659079 TGGTAAGGTTCAGTTTTCCACATTT 59.341 36.000 0.00 0.00 0.00 2.32
4602 4828 4.473444 TGATCTTTTGTCCTTTTGCCTCT 58.527 39.130 0.00 0.00 0.00 3.69
4819 5046 4.287766 ACATGGAGTAACAGGTTTCCTC 57.712 45.455 0.00 4.46 30.15 3.71
4833 5060 7.793036 ACAGGTTTCCTCTTGTATAATACTCC 58.207 38.462 0.00 0.00 0.00 3.85
4834 5061 7.147532 ACAGGTTTCCTCTTGTATAATACTCCC 60.148 40.741 0.00 0.00 0.00 4.30
4835 5062 7.071321 CAGGTTTCCTCTTGTATAATACTCCCT 59.929 40.741 0.00 0.00 0.00 4.20
4836 5063 7.290481 AGGTTTCCTCTTGTATAATACTCCCTC 59.710 40.741 0.00 0.00 0.00 4.30
4837 5064 7.443477 GTTTCCTCTTGTATAATACTCCCTCC 58.557 42.308 0.00 0.00 0.00 4.30
4838 5065 5.322754 TCCTCTTGTATAATACTCCCTCCG 58.677 45.833 0.00 0.00 0.00 4.63
4839 5066 5.078256 CCTCTTGTATAATACTCCCTCCGT 58.922 45.833 0.00 0.00 0.00 4.69
4840 5067 5.539193 CCTCTTGTATAATACTCCCTCCGTT 59.461 44.000 0.00 0.00 0.00 4.44
4841 5068 6.294620 CCTCTTGTATAATACTCCCTCCGTTC 60.295 46.154 0.00 0.00 0.00 3.95
4842 5069 5.537674 TCTTGTATAATACTCCCTCCGTTCC 59.462 44.000 0.00 0.00 0.00 3.62
4843 5070 5.070823 TGTATAATACTCCCTCCGTTCCT 57.929 43.478 0.00 0.00 0.00 3.36
4844 5071 6.204852 TGTATAATACTCCCTCCGTTCCTA 57.795 41.667 0.00 0.00 0.00 2.94
4845 5072 6.613699 TGTATAATACTCCCTCCGTTCCTAA 58.386 40.000 0.00 0.00 0.00 2.69
4846 5073 7.068702 TGTATAATACTCCCTCCGTTCCTAAA 58.931 38.462 0.00 0.00 0.00 1.85
4847 5074 7.731688 TGTATAATACTCCCTCCGTTCCTAAAT 59.268 37.037 0.00 0.00 0.00 1.40
4848 5075 9.247861 GTATAATACTCCCTCCGTTCCTAAATA 57.752 37.037 0.00 0.00 0.00 1.40
4849 5076 8.912614 ATAATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
4850 5077 7.628501 AATACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
4851 5078 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
4852 5079 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
4853 5080 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
4854 5081 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4855 5082 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4856 5083 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4857 5084 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4858 5085 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
4859 5086 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
4887 5114 8.873215 AGATTTCAAATAGACTACCACATACG 57.127 34.615 0.00 0.00 0.00 3.06
4888 5115 7.926555 AGATTTCAAATAGACTACCACATACGG 59.073 37.037 0.00 0.00 0.00 4.02
4889 5116 6.778834 TTCAAATAGACTACCACATACGGA 57.221 37.500 0.00 0.00 0.00 4.69
4890 5117 6.971726 TCAAATAGACTACCACATACGGAT 57.028 37.500 0.00 0.00 0.00 4.18
4891 5118 6.745116 TCAAATAGACTACCACATACGGATG 58.255 40.000 5.94 5.94 39.16 3.51
4893 5120 7.503230 TCAAATAGACTACCACATACGGATGTA 59.497 37.037 14.23 0.00 44.82 2.29
4894 5121 8.304596 CAAATAGACTACCACATACGGATGTAT 58.695 37.037 14.23 7.46 44.82 2.29
4895 5122 9.524496 AAATAGACTACCACATACGGATGTATA 57.476 33.333 14.23 8.27 44.82 1.47
4896 5123 9.696572 AATAGACTACCACATACGGATGTATAT 57.303 33.333 14.23 4.37 44.82 0.86
4898 5125 8.734218 AGACTACCACATACGGATGTATATAG 57.266 38.462 14.23 16.35 44.82 1.31
4899 5126 8.546322 AGACTACCACATACGGATGTATATAGA 58.454 37.037 22.62 5.04 44.82 1.98
4900 5127 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
4901 5128 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
4902 5129 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
4904 5131 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
4933 5160 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
4934 5161 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
4935 5162 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
4936 5163 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
4937 5164 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
4938 5165 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
4939 5166 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
4940 5167 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
4941 5168 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
4942 5169 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
4943 5170 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
4944 5171 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
4945 5172 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
4946 5173 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
4947 5174 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
4948 5175 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
4949 5176 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
4950 5177 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
4951 5178 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
4952 5179 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
4953 5180 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
4954 5181 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
4955 5182 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
4956 5183 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
4957 5184 7.604549 TCCGTATGTAGTCACTTGTTGAAATA 58.395 34.615 0.00 0.00 35.39 1.40
4958 5185 8.255206 TCCGTATGTAGTCACTTGTTGAAATAT 58.745 33.333 0.00 0.00 35.39 1.28
4959 5186 8.540492 CCGTATGTAGTCACTTGTTGAAATATC 58.460 37.037 0.00 0.00 35.39 1.63
4960 5187 9.302345 CGTATGTAGTCACTTGTTGAAATATCT 57.698 33.333 0.00 0.00 35.39 1.98
4969 5196 9.996554 TCACTTGTTGAAATATCTAGAAAGACA 57.003 29.630 0.00 0.00 33.57 3.41
4984 5211 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4985 5212 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4986 5213 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
4987 5214 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
4988 5215 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4989 5216 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4990 5217 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4991 5218 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
5016 5243 1.289160 TCTTGCAGATGGCTTACCCT 58.711 50.000 0.00 0.00 45.15 4.34
5019 5246 2.603075 TGCAGATGGCTTACCCTTTT 57.397 45.000 0.00 0.00 45.15 2.27
5020 5247 2.888212 TGCAGATGGCTTACCCTTTTT 58.112 42.857 0.00 0.00 45.15 1.94
5053 5280 2.867287 TGGTTGTGCACATTCTGTTG 57.133 45.000 22.39 0.00 0.00 3.33
5217 5528 1.809207 CCAATCCAACGGCACATCC 59.191 57.895 0.00 0.00 0.00 3.51
5283 5594 0.394762 TGCATCTGTTGGAGGATGGC 60.395 55.000 0.00 0.00 39.52 4.40
5350 5661 8.766000 TTAACAAATTCTCTTGTATACGAGCA 57.234 30.769 14.49 1.95 38.59 4.26
5672 5995 8.840200 ATGGTTTACTATCAGAGTAGGAAAGA 57.160 34.615 0.00 0.00 41.75 2.52
5742 6065 8.753497 AGAAGAACAAAACAGAAAGGAAGTAT 57.247 30.769 0.00 0.00 0.00 2.12
5787 6113 2.679355 TGGAAATGCTTCGTTGTTCG 57.321 45.000 0.00 0.00 41.41 3.95
5812 6138 0.034670 AGCTCCCAGCCAGATTGTTC 60.035 55.000 0.00 0.00 43.77 3.18
5813 6139 0.322816 GCTCCCAGCCAGATTGTTCA 60.323 55.000 0.00 0.00 34.48 3.18
5816 6142 1.308069 CCCAGCCAGATTGTTCACGG 61.308 60.000 0.00 0.00 0.00 4.94
5835 6161 5.298276 TCACGGATACAAAGCAAAAACTCTT 59.702 36.000 0.00 0.00 0.00 2.85
5837 6163 5.298276 ACGGATACAAAGCAAAAACTCTTGA 59.702 36.000 0.00 0.00 0.00 3.02
5898 6224 5.833667 TCCTGTCGATCCATATTACTTGTCT 59.166 40.000 0.00 0.00 0.00 3.41
5899 6225 7.002276 TCCTGTCGATCCATATTACTTGTCTA 58.998 38.462 0.00 0.00 0.00 2.59
5900 6226 7.040617 TCCTGTCGATCCATATTACTTGTCTAC 60.041 40.741 0.00 0.00 0.00 2.59
5901 6227 7.040340 CCTGTCGATCCATATTACTTGTCTACT 60.040 40.741 0.00 0.00 0.00 2.57
5902 6228 8.234136 TGTCGATCCATATTACTTGTCTACTT 57.766 34.615 0.00 0.00 0.00 2.24
5933 6266 4.474303 TTATGGGTCGGAGGGAGTAATA 57.526 45.455 0.00 0.00 0.00 0.98
5950 6283 8.034804 GGGAGTAATACTTTTCATTTTGCATGT 58.965 33.333 0.00 0.00 0.00 3.21
5951 6284 8.863049 GGAGTAATACTTTTCATTTTGCATGTG 58.137 33.333 0.00 0.00 0.00 3.21
5994 6327 2.009774 CACCCGGCAATCTCTTTGTAG 58.990 52.381 0.00 0.00 37.65 2.74
5999 6332 2.487762 CGGCAATCTCTTTGTAGGCAAA 59.512 45.455 0.00 0.00 41.77 3.68
6004 6337 5.349543 GCAATCTCTTTGTAGGCAAAAATGG 59.650 40.000 0.00 0.00 43.17 3.16
6005 6338 5.665916 ATCTCTTTGTAGGCAAAAATGGG 57.334 39.130 0.00 0.00 43.17 4.00
6006 6339 3.258123 TCTCTTTGTAGGCAAAAATGGGC 59.742 43.478 0.00 0.00 43.17 5.36
6007 6340 2.029470 TCTTTGTAGGCAAAAATGGGCG 60.029 45.455 0.00 0.00 43.17 6.13
6008 6341 0.037790 TTGTAGGCAAAAATGGGCGC 60.038 50.000 0.00 0.00 35.71 6.53
6009 6342 1.181741 TGTAGGCAAAAATGGGCGCA 61.182 50.000 10.83 5.70 35.71 6.09
6010 6343 0.458370 GTAGGCAAAAATGGGCGCAG 60.458 55.000 10.83 0.00 35.71 5.18
6011 6344 0.610509 TAGGCAAAAATGGGCGCAGA 60.611 50.000 10.83 0.00 35.71 4.26
6012 6345 1.446618 GGCAAAAATGGGCGCAGAG 60.447 57.895 10.83 0.00 0.00 3.35
6013 6346 1.290009 GCAAAAATGGGCGCAGAGT 59.710 52.632 10.83 0.00 0.00 3.24
6014 6347 0.319813 GCAAAAATGGGCGCAGAGTT 60.320 50.000 10.83 0.00 0.00 3.01
6015 6348 1.873486 GCAAAAATGGGCGCAGAGTTT 60.873 47.619 10.83 3.34 0.00 2.66
6016 6349 2.061028 CAAAAATGGGCGCAGAGTTTC 58.939 47.619 10.83 0.00 0.00 2.78
6017 6350 1.620822 AAAATGGGCGCAGAGTTTCT 58.379 45.000 10.83 0.00 0.00 2.52
6018 6351 0.883833 AAATGGGCGCAGAGTTTCTG 59.116 50.000 10.83 1.75 46.90 3.02
6023 6356 3.368903 GGGCGCAGAGTTTCTGAGTCT 62.369 57.143 10.83 0.00 46.01 3.24
6030 6363 3.495331 AGAGTTTCTGAGTCTGAGCTCA 58.505 45.455 17.19 17.19 42.56 4.26
6031 6364 3.894427 AGAGTTTCTGAGTCTGAGCTCAA 59.106 43.478 18.85 6.19 43.92 3.02
6032 6365 4.343526 AGAGTTTCTGAGTCTGAGCTCAAA 59.656 41.667 18.85 0.21 43.92 2.69
6033 6366 5.011943 AGAGTTTCTGAGTCTGAGCTCAAAT 59.988 40.000 18.85 8.15 43.92 2.32
6034 6367 4.996122 AGTTTCTGAGTCTGAGCTCAAATG 59.004 41.667 18.85 6.49 43.92 2.32
6035 6368 4.879197 TTCTGAGTCTGAGCTCAAATGA 57.121 40.909 18.85 9.03 43.92 2.57
6036 6369 4.879197 TCTGAGTCTGAGCTCAAATGAA 57.121 40.909 18.85 2.98 43.92 2.57
6037 6370 5.219343 TCTGAGTCTGAGCTCAAATGAAA 57.781 39.130 18.85 1.35 43.92 2.69
6038 6371 5.802465 TCTGAGTCTGAGCTCAAATGAAAT 58.198 37.500 18.85 4.18 43.92 2.17
6039 6372 6.939622 TCTGAGTCTGAGCTCAAATGAAATA 58.060 36.000 18.85 0.00 43.92 1.40
6040 6373 7.389232 TCTGAGTCTGAGCTCAAATGAAATAA 58.611 34.615 18.85 0.00 43.92 1.40
6041 6374 7.879677 TCTGAGTCTGAGCTCAAATGAAATAAA 59.120 33.333 18.85 0.00 43.92 1.40
6042 6375 8.394971 TGAGTCTGAGCTCAAATGAAATAAAA 57.605 30.769 18.85 0.00 41.93 1.52
6043 6376 8.849168 TGAGTCTGAGCTCAAATGAAATAAAAA 58.151 29.630 18.85 0.00 41.93 1.94
6044 6377 9.852091 GAGTCTGAGCTCAAATGAAATAAAAAT 57.148 29.630 18.85 0.00 35.67 1.82
6045 6378 9.852091 AGTCTGAGCTCAAATGAAATAAAAATC 57.148 29.630 18.85 0.00 0.00 2.17
6046 6379 9.630098 GTCTGAGCTCAAATGAAATAAAAATCA 57.370 29.630 18.85 0.00 0.00 2.57
6089 6422 8.715191 TTATGACAAAATTTTCAAGTGCTTGT 57.285 26.923 11.17 0.00 41.16 3.16
6090 6423 6.645700 TGACAAAATTTTCAAGTGCTTGTC 57.354 33.333 11.17 3.90 40.85 3.18
6091 6424 6.162079 TGACAAAATTTTCAAGTGCTTGTCA 58.838 32.000 10.84 10.84 45.23 3.58
6092 6425 6.817641 TGACAAAATTTTCAAGTGCTTGTCAT 59.182 30.769 10.84 1.07 43.59 3.06
6093 6426 7.007313 ACAAAATTTTCAAGTGCTTGTCATG 57.993 32.000 11.17 0.00 41.16 3.07
6094 6427 6.037391 ACAAAATTTTCAAGTGCTTGTCATGG 59.963 34.615 11.17 0.00 41.16 3.66
6095 6428 4.942761 ATTTTCAAGTGCTTGTCATGGT 57.057 36.364 11.17 0.00 41.16 3.55
6096 6429 6.403866 AATTTTCAAGTGCTTGTCATGGTA 57.596 33.333 11.17 0.00 41.16 3.25
6097 6430 6.594788 ATTTTCAAGTGCTTGTCATGGTAT 57.405 33.333 11.17 0.00 41.16 2.73
6098 6431 5.627499 TTTCAAGTGCTTGTCATGGTATC 57.373 39.130 11.17 0.00 41.16 2.24
6099 6432 4.284829 TCAAGTGCTTGTCATGGTATCA 57.715 40.909 11.17 0.00 41.16 2.15
6100 6433 4.002982 TCAAGTGCTTGTCATGGTATCAC 58.997 43.478 11.17 0.00 41.16 3.06
6101 6434 3.701205 AGTGCTTGTCATGGTATCACA 57.299 42.857 0.00 0.00 0.00 3.58
6102 6435 4.226427 AGTGCTTGTCATGGTATCACAT 57.774 40.909 0.00 0.00 0.00 3.21
6103 6436 4.592942 AGTGCTTGTCATGGTATCACATT 58.407 39.130 0.00 0.00 0.00 2.71
6104 6437 4.637534 AGTGCTTGTCATGGTATCACATTC 59.362 41.667 0.00 0.00 0.00 2.67
6105 6438 3.947196 TGCTTGTCATGGTATCACATTCC 59.053 43.478 0.00 0.00 0.00 3.01
6106 6439 4.202441 GCTTGTCATGGTATCACATTCCT 58.798 43.478 0.00 0.00 0.00 3.36
6107 6440 5.104569 TGCTTGTCATGGTATCACATTCCTA 60.105 40.000 0.00 0.00 0.00 2.94
6108 6441 5.468072 GCTTGTCATGGTATCACATTCCTAG 59.532 44.000 0.00 0.00 0.00 3.02
6109 6442 6.686378 GCTTGTCATGGTATCACATTCCTAGA 60.686 42.308 0.00 0.00 0.00 2.43
6110 6443 6.806668 TGTCATGGTATCACATTCCTAGAA 57.193 37.500 0.00 0.00 0.00 2.10
6111 6444 6.820335 TGTCATGGTATCACATTCCTAGAAG 58.180 40.000 0.00 0.00 0.00 2.85
6112 6445 6.183361 TGTCATGGTATCACATTCCTAGAAGG 60.183 42.308 0.00 0.00 36.46 3.46
6113 6446 5.905331 TCATGGTATCACATTCCTAGAAGGT 59.095 40.000 0.00 0.00 36.53 3.50
6114 6447 5.614324 TGGTATCACATTCCTAGAAGGTG 57.386 43.478 14.20 14.20 36.53 4.00
6115 6448 4.141711 TGGTATCACATTCCTAGAAGGTGC 60.142 45.833 15.25 4.48 36.53 5.01
6116 6449 2.672961 TCACATTCCTAGAAGGTGCG 57.327 50.000 15.25 0.00 36.53 5.34
6117 6450 1.207089 TCACATTCCTAGAAGGTGCGG 59.793 52.381 15.25 0.00 36.53 5.69
6118 6451 0.107654 ACATTCCTAGAAGGTGCGGC 60.108 55.000 0.00 0.00 36.53 6.53
6119 6452 0.107703 CATTCCTAGAAGGTGCGGCA 60.108 55.000 0.00 0.00 36.53 5.69
6120 6453 0.618458 ATTCCTAGAAGGTGCGGCAA 59.382 50.000 3.23 0.00 36.53 4.52
6121 6454 0.398696 TTCCTAGAAGGTGCGGCAAA 59.601 50.000 3.23 0.00 36.53 3.68
6122 6455 0.398696 TCCTAGAAGGTGCGGCAAAA 59.601 50.000 3.23 0.00 36.53 2.44
6123 6456 1.202830 TCCTAGAAGGTGCGGCAAAAA 60.203 47.619 3.23 0.00 36.53 1.94
6143 6476 4.918810 AAAAAGTCGGTGCTCTGAAAAT 57.081 36.364 0.00 0.00 0.00 1.82
6144 6477 3.904136 AAAGTCGGTGCTCTGAAAATG 57.096 42.857 0.00 0.00 0.00 2.32
6145 6478 1.160137 AGTCGGTGCTCTGAAAATGC 58.840 50.000 0.00 0.00 0.00 3.56
6146 6479 1.160137 GTCGGTGCTCTGAAAATGCT 58.840 50.000 0.00 0.00 0.00 3.79
6147 6480 2.028112 AGTCGGTGCTCTGAAAATGCTA 60.028 45.455 0.00 0.00 0.00 3.49
6148 6481 2.094417 GTCGGTGCTCTGAAAATGCTAC 59.906 50.000 0.00 0.00 0.00 3.58
6149 6482 2.028112 TCGGTGCTCTGAAAATGCTACT 60.028 45.455 0.00 0.00 0.00 2.57
6150 6483 2.744202 CGGTGCTCTGAAAATGCTACTT 59.256 45.455 0.00 0.00 0.00 2.24
6151 6484 3.189287 CGGTGCTCTGAAAATGCTACTTT 59.811 43.478 0.00 0.00 0.00 2.66
6152 6485 4.670221 CGGTGCTCTGAAAATGCTACTTTC 60.670 45.833 0.00 0.00 34.09 2.62
6153 6486 4.216257 GGTGCTCTGAAAATGCTACTTTCA 59.784 41.667 7.77 7.77 39.79 2.69
6154 6487 5.278463 GGTGCTCTGAAAATGCTACTTTCAA 60.278 40.000 8.91 2.50 41.10 2.69
6155 6488 6.208644 GTGCTCTGAAAATGCTACTTTCAAA 58.791 36.000 8.91 0.00 41.10 2.69
6156 6489 6.697019 GTGCTCTGAAAATGCTACTTTCAAAA 59.303 34.615 8.91 2.31 41.10 2.44
6157 6490 7.383300 GTGCTCTGAAAATGCTACTTTCAAAAT 59.617 33.333 8.91 0.00 41.10 1.82
6158 6491 7.596248 TGCTCTGAAAATGCTACTTTCAAAATC 59.404 33.333 8.91 2.43 41.10 2.17
6159 6492 7.596248 GCTCTGAAAATGCTACTTTCAAAATCA 59.404 33.333 8.91 0.00 41.10 2.57
6160 6493 8.801715 TCTGAAAATGCTACTTTCAAAATCAC 57.198 30.769 8.91 0.00 41.10 3.06
6161 6494 8.632679 TCTGAAAATGCTACTTTCAAAATCACT 58.367 29.630 8.91 0.00 41.10 3.41
6162 6495 9.252962 CTGAAAATGCTACTTTCAAAATCACTT 57.747 29.630 8.91 0.00 41.10 3.16
6163 6496 9.598517 TGAAAATGCTACTTTCAAAATCACTTT 57.401 25.926 6.12 0.00 39.28 2.66
6164 6497 9.853921 GAAAATGCTACTTTCAAAATCACTTTG 57.146 29.630 0.00 0.00 45.03 2.77
6165 6498 7.951530 AATGCTACTTTCAAAATCACTTTGG 57.048 32.000 0.00 0.00 44.00 3.28
6166 6499 6.707440 TGCTACTTTCAAAATCACTTTGGA 57.293 33.333 0.00 0.00 44.00 3.53
6167 6500 6.738114 TGCTACTTTCAAAATCACTTTGGAG 58.262 36.000 0.00 0.43 44.00 3.86
6168 6501 5.631096 GCTACTTTCAAAATCACTTTGGAGC 59.369 40.000 0.00 0.00 44.00 4.70
6169 6502 5.596836 ACTTTCAAAATCACTTTGGAGCA 57.403 34.783 0.00 0.00 44.00 4.26
6170 6503 6.165700 ACTTTCAAAATCACTTTGGAGCAT 57.834 33.333 0.00 0.00 44.00 3.79
6171 6504 6.585416 ACTTTCAAAATCACTTTGGAGCATT 58.415 32.000 0.00 0.00 44.00 3.56
6172 6505 6.480981 ACTTTCAAAATCACTTTGGAGCATTG 59.519 34.615 0.00 0.00 44.00 2.82
6173 6506 5.787953 TCAAAATCACTTTGGAGCATTGA 57.212 34.783 0.00 0.00 44.00 2.57
6174 6507 6.349243 TCAAAATCACTTTGGAGCATTGAT 57.651 33.333 0.00 0.00 44.00 2.57
6175 6508 6.761312 TCAAAATCACTTTGGAGCATTGATT 58.239 32.000 0.00 0.00 44.00 2.57
6176 6509 7.218614 TCAAAATCACTTTGGAGCATTGATTT 58.781 30.769 2.72 2.72 44.78 2.17
6178 6511 8.347035 CAAAATCACTTTGGAGCATTGATTTTT 58.653 29.630 14.76 2.71 46.95 1.94
6203 6536 2.791347 TTTTGCCACGCCTTATAGGA 57.209 45.000 0.00 0.00 37.67 2.94
6204 6537 2.791347 TTTGCCACGCCTTATAGGAA 57.209 45.000 0.00 0.00 37.67 3.36
6205 6538 3.290948 TTTGCCACGCCTTATAGGAAT 57.709 42.857 0.00 0.00 37.67 3.01
6206 6539 2.254546 TGCCACGCCTTATAGGAATG 57.745 50.000 0.00 0.00 37.67 2.67
6207 6540 1.488812 TGCCACGCCTTATAGGAATGT 59.511 47.619 0.00 0.00 37.67 2.71
6208 6541 1.873591 GCCACGCCTTATAGGAATGTG 59.126 52.381 0.00 2.20 37.67 3.21
6209 6542 2.484770 GCCACGCCTTATAGGAATGTGA 60.485 50.000 12.05 0.00 37.67 3.58
6210 6543 3.807209 GCCACGCCTTATAGGAATGTGAT 60.807 47.826 12.05 0.00 37.67 3.06
6211 6544 4.389374 CCACGCCTTATAGGAATGTGATT 58.611 43.478 12.05 0.00 37.67 2.57
6212 6545 4.452455 CCACGCCTTATAGGAATGTGATTC 59.548 45.833 12.05 0.00 37.67 2.52
6228 6561 9.545611 GAATGTGATTCCATAACAAATTTTTGC 57.454 29.630 3.00 0.00 36.17 3.68
6229 6562 8.618702 ATGTGATTCCATAACAAATTTTTGCA 57.381 26.923 3.00 0.00 41.79 4.08
6230 6563 8.442632 TGTGATTCCATAACAAATTTTTGCAA 57.557 26.923 0.00 0.00 41.79 4.08
6231 6564 8.557864 TGTGATTCCATAACAAATTTTTGCAAG 58.442 29.630 0.00 0.00 41.79 4.01
6232 6565 7.534918 GTGATTCCATAACAAATTTTTGCAAGC 59.465 33.333 0.00 0.00 41.79 4.01
6233 6566 6.932356 TTCCATAACAAATTTTTGCAAGCA 57.068 29.167 0.00 0.00 41.79 3.91
6234 6567 6.297694 TCCATAACAAATTTTTGCAAGCAC 57.702 33.333 0.00 0.00 41.79 4.40
6235 6568 6.054295 TCCATAACAAATTTTTGCAAGCACT 58.946 32.000 0.00 0.00 41.79 4.40
6236 6569 6.541641 TCCATAACAAATTTTTGCAAGCACTT 59.458 30.769 0.00 0.00 41.79 3.16
6237 6570 6.633634 CCATAACAAATTTTTGCAAGCACTTG 59.366 34.615 6.01 6.01 41.79 3.16
6238 6571 5.876612 AACAAATTTTTGCAAGCACTTGA 57.123 30.435 14.44 0.00 41.79 3.02
6239 6572 5.876612 ACAAATTTTTGCAAGCACTTGAA 57.123 30.435 14.44 0.03 41.79 2.69
6240 6573 6.439675 ACAAATTTTTGCAAGCACTTGAAT 57.560 29.167 14.44 2.38 41.79 2.57
6241 6574 6.854778 ACAAATTTTTGCAAGCACTTGAATT 58.145 28.000 14.44 7.97 41.79 2.17
6242 6575 7.314393 ACAAATTTTTGCAAGCACTTGAATTT 58.686 26.923 14.44 12.74 41.79 1.82
6243 6576 7.813627 ACAAATTTTTGCAAGCACTTGAATTTT 59.186 25.926 14.44 6.12 41.79 1.82
6244 6577 8.648968 CAAATTTTTGCAAGCACTTGAATTTTT 58.351 25.926 14.44 3.43 42.93 1.94
6266 6599 7.807977 TTTTTACTGTTCTCTGAGCTCATTT 57.192 32.000 18.63 0.00 0.00 2.32
6267 6600 6.791887 TTTACTGTTCTCTGAGCTCATTTG 57.208 37.500 18.63 10.41 0.00 2.32
6268 6601 4.613925 ACTGTTCTCTGAGCTCATTTGA 57.386 40.909 18.63 10.44 0.00 2.69
6269 6602 4.314121 ACTGTTCTCTGAGCTCATTTGAC 58.686 43.478 18.63 14.07 0.00 3.18
6270 6603 4.040217 ACTGTTCTCTGAGCTCATTTGACT 59.960 41.667 18.63 0.00 0.00 3.41
6271 6604 4.564041 TGTTCTCTGAGCTCATTTGACTC 58.436 43.478 18.63 11.09 0.00 3.36
6272 6605 4.282957 TGTTCTCTGAGCTCATTTGACTCT 59.717 41.667 18.63 0.00 0.00 3.24
6273 6606 4.453177 TCTCTGAGCTCATTTGACTCTG 57.547 45.455 18.63 1.85 0.00 3.35
6274 6607 4.085009 TCTCTGAGCTCATTTGACTCTGA 58.915 43.478 18.63 6.61 37.04 3.27
6275 6608 4.426416 CTCTGAGCTCATTTGACTCTGAG 58.574 47.826 18.63 12.70 44.57 3.35
6283 6616 5.870444 CTCATTTGACTCTGAGCTCATTTG 58.130 41.667 18.63 12.51 33.12 2.32
6284 6617 5.554070 TCATTTGACTCTGAGCTCATTTGA 58.446 37.500 18.63 10.44 0.00 2.69
6285 6618 5.642491 TCATTTGACTCTGAGCTCATTTGAG 59.358 40.000 23.11 23.11 44.75 3.02
6306 6639 4.035102 GGGAGCGGAAGGGCACTT 62.035 66.667 0.00 0.00 40.34 3.16
6307 6640 2.034221 GGAGCGGAAGGGCACTTT 59.966 61.111 0.84 0.00 36.97 2.66
6308 6641 2.041115 GGAGCGGAAGGGCACTTTC 61.041 63.158 0.84 0.00 36.97 2.62
6309 6642 1.003233 GAGCGGAAGGGCACTTTCT 60.003 57.895 0.84 0.06 36.97 2.52
6310 6643 0.249398 GAGCGGAAGGGCACTTTCTA 59.751 55.000 0.84 0.00 36.97 2.10
6311 6644 0.036294 AGCGGAAGGGCACTTTCTAC 60.036 55.000 0.84 0.00 36.97 2.59
6312 6645 1.025113 GCGGAAGGGCACTTTCTACC 61.025 60.000 0.84 0.00 36.97 3.18
6313 6646 0.613777 CGGAAGGGCACTTTCTACCT 59.386 55.000 0.84 0.00 36.97 3.08
6314 6647 1.405661 CGGAAGGGCACTTTCTACCTC 60.406 57.143 0.84 0.00 36.97 3.85
6315 6648 1.065345 GGAAGGGCACTTTCTACCTCC 60.065 57.143 0.84 0.00 36.97 4.30
6316 6649 1.909986 GAAGGGCACTTTCTACCTCCT 59.090 52.381 0.84 0.00 36.97 3.69
6317 6650 1.574263 AGGGCACTTTCTACCTCCTC 58.426 55.000 0.00 0.00 0.00 3.71
6318 6651 0.542333 GGGCACTTTCTACCTCCTCC 59.458 60.000 0.00 0.00 0.00 4.30
6319 6652 1.574263 GGCACTTTCTACCTCCTCCT 58.426 55.000 0.00 0.00 0.00 3.69
6320 6653 1.208293 GGCACTTTCTACCTCCTCCTG 59.792 57.143 0.00 0.00 0.00 3.86
6321 6654 1.903183 GCACTTTCTACCTCCTCCTGT 59.097 52.381 0.00 0.00 0.00 4.00
6322 6655 3.097614 GCACTTTCTACCTCCTCCTGTA 58.902 50.000 0.00 0.00 0.00 2.74
6323 6656 3.131400 GCACTTTCTACCTCCTCCTGTAG 59.869 52.174 0.00 0.00 36.59 2.74
6324 6657 4.601084 CACTTTCTACCTCCTCCTGTAGA 58.399 47.826 0.00 0.00 41.16 2.59
6325 6658 5.205056 CACTTTCTACCTCCTCCTGTAGAT 58.795 45.833 0.00 0.00 42.10 1.98
6326 6659 5.659079 CACTTTCTACCTCCTCCTGTAGATT 59.341 44.000 0.00 0.00 42.10 2.40
6327 6660 6.155393 CACTTTCTACCTCCTCCTGTAGATTT 59.845 42.308 0.00 0.00 42.10 2.17
6328 6661 6.731448 ACTTTCTACCTCCTCCTGTAGATTTT 59.269 38.462 0.00 0.00 42.10 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 116 0.248296 GCTGTCCTCGATGACGACTC 60.248 60.000 14.87 2.12 43.81 3.36
116 117 1.803943 GCTGTCCTCGATGACGACT 59.196 57.895 14.87 0.00 43.81 4.18
281 288 6.865205 CCAATTAGAAAAGAAACTGGCTGAAG 59.135 38.462 0.00 0.00 0.00 3.02
338 345 5.981174 GCGAAGTTCGGCAAATATTACATA 58.019 37.500 25.55 0.00 40.84 2.29
526 539 4.970174 CTACGACGCGTGGTCTAG 57.030 61.111 30.17 18.95 43.79 2.43
531 544 2.961526 GATCCGACTACGACGCGTGG 62.962 65.000 20.70 20.40 43.66 4.94
532 545 1.650536 GATCCGACTACGACGCGTG 60.651 63.158 20.70 12.18 41.39 5.34
533 546 1.760268 GAGATCCGACTACGACGCGT 61.760 60.000 13.85 13.85 44.35 6.01
534 547 1.083529 GAGATCCGACTACGACGCG 60.084 63.158 3.53 3.53 42.66 6.01
535 548 1.279238 GGAGATCCGACTACGACGC 59.721 63.158 0.00 0.00 42.66 5.19
536 549 1.012086 TTGGAGATCCGACTACGACG 58.988 55.000 0.00 0.00 42.66 5.12
537 550 3.550436 GGATTTGGAGATCCGACTACGAC 60.550 52.174 0.00 0.00 42.66 4.34
538 551 2.621998 GGATTTGGAGATCCGACTACGA 59.378 50.000 0.00 0.00 42.66 3.43
539 552 3.014604 GGATTTGGAGATCCGACTACG 57.985 52.381 0.00 0.00 36.53 3.51
546 559 4.848357 TGAGTTCTTGGATTTGGAGATCC 58.152 43.478 0.00 0.00 44.83 3.36
547 560 6.238320 CGAATGAGTTCTTGGATTTGGAGATC 60.238 42.308 0.00 0.00 32.00 2.75
548 561 5.587844 CGAATGAGTTCTTGGATTTGGAGAT 59.412 40.000 0.00 0.00 32.00 2.75
549 562 4.937620 CGAATGAGTTCTTGGATTTGGAGA 59.062 41.667 0.00 0.00 32.00 3.71
550 563 4.937620 TCGAATGAGTTCTTGGATTTGGAG 59.062 41.667 0.00 0.00 32.00 3.86
551 564 4.905429 TCGAATGAGTTCTTGGATTTGGA 58.095 39.130 0.00 0.00 32.00 3.53
552 565 5.627499 TTCGAATGAGTTCTTGGATTTGG 57.373 39.130 0.00 0.00 32.00 3.28
553 566 6.917477 TGTTTTCGAATGAGTTCTTGGATTTG 59.083 34.615 0.00 0.00 32.00 2.32
554 567 7.038154 TGTTTTCGAATGAGTTCTTGGATTT 57.962 32.000 0.00 0.00 32.00 2.17
555 568 6.633500 TGTTTTCGAATGAGTTCTTGGATT 57.367 33.333 0.00 0.00 32.00 3.01
556 569 6.633500 TTGTTTTCGAATGAGTTCTTGGAT 57.367 33.333 0.00 0.00 32.00 3.41
557 570 6.443934 TTTGTTTTCGAATGAGTTCTTGGA 57.556 33.333 0.00 0.00 32.00 3.53
558 571 7.222611 ACATTTTGTTTTCGAATGAGTTCTTGG 59.777 33.333 0.00 0.00 32.00 3.61
559 572 8.118893 ACATTTTGTTTTCGAATGAGTTCTTG 57.881 30.769 0.00 0.00 32.00 3.02
560 573 8.702163 AACATTTTGTTTTCGAATGAGTTCTT 57.298 26.923 0.00 0.00 37.26 2.52
561 574 9.965824 ATAACATTTTGTTTTCGAATGAGTTCT 57.034 25.926 0.00 0.00 41.45 3.01
563 576 9.965824 AGATAACATTTTGTTTTCGAATGAGTT 57.034 25.926 0.00 0.00 41.23 3.01
564 577 9.612620 GAGATAACATTTTGTTTTCGAATGAGT 57.387 29.630 0.00 0.00 41.23 3.41
565 578 9.611284 TGAGATAACATTTTGTTTTCGAATGAG 57.389 29.630 0.00 0.00 41.23 2.90
566 579 9.393249 GTGAGATAACATTTTGTTTTCGAATGA 57.607 29.630 0.00 0.00 41.23 2.57
567 580 9.179552 TGTGAGATAACATTTTGTTTTCGAATG 57.820 29.630 0.00 0.00 41.23 2.67
568 581 9.398170 CTGTGAGATAACATTTTGTTTTCGAAT 57.602 29.630 0.00 0.00 41.23 3.34
569 582 7.378461 GCTGTGAGATAACATTTTGTTTTCGAA 59.622 33.333 0.00 0.00 41.23 3.71
570 583 6.855914 GCTGTGAGATAACATTTTGTTTTCGA 59.144 34.615 0.00 0.00 41.23 3.71
571 584 6.636447 TGCTGTGAGATAACATTTTGTTTTCG 59.364 34.615 0.00 0.00 41.23 3.46
572 585 7.096065 GGTGCTGTGAGATAACATTTTGTTTTC 60.096 37.037 0.00 0.96 41.45 2.29
573 586 6.701400 GGTGCTGTGAGATAACATTTTGTTTT 59.299 34.615 0.00 0.00 41.45 2.43
574 587 6.040842 AGGTGCTGTGAGATAACATTTTGTTT 59.959 34.615 0.00 0.00 41.45 2.83
575 588 5.536161 AGGTGCTGTGAGATAACATTTTGTT 59.464 36.000 0.00 0.00 43.88 2.83
576 589 5.072741 AGGTGCTGTGAGATAACATTTTGT 58.927 37.500 0.00 0.00 0.00 2.83
577 590 5.392380 GGAGGTGCTGTGAGATAACATTTTG 60.392 44.000 0.00 0.00 0.00 2.44
578 591 4.702131 GGAGGTGCTGTGAGATAACATTTT 59.298 41.667 0.00 0.00 0.00 1.82
579 592 4.265073 GGAGGTGCTGTGAGATAACATTT 58.735 43.478 0.00 0.00 0.00 2.32
580 593 3.679917 CGGAGGTGCTGTGAGATAACATT 60.680 47.826 0.00 0.00 0.00 2.71
581 594 2.159043 CGGAGGTGCTGTGAGATAACAT 60.159 50.000 0.00 0.00 0.00 2.71
582 595 1.204704 CGGAGGTGCTGTGAGATAACA 59.795 52.381 0.00 0.00 0.00 2.41
583 596 1.927895 CGGAGGTGCTGTGAGATAAC 58.072 55.000 0.00 0.00 0.00 1.89
584 597 0.175760 GCGGAGGTGCTGTGAGATAA 59.824 55.000 0.00 0.00 0.00 1.75
585 598 0.970427 TGCGGAGGTGCTGTGAGATA 60.970 55.000 0.00 0.00 35.36 1.98
586 599 2.236223 CTGCGGAGGTGCTGTGAGAT 62.236 60.000 0.00 0.00 35.36 2.75
587 600 2.917227 TGCGGAGGTGCTGTGAGA 60.917 61.111 0.00 0.00 35.36 3.27
588 601 2.433838 CTGCGGAGGTGCTGTGAG 60.434 66.667 0.00 0.00 35.36 3.51
589 602 4.687215 GCTGCGGAGGTGCTGTGA 62.687 66.667 5.93 0.00 36.33 3.58
601 614 4.457496 ATCTGTGACCCGGCTGCG 62.457 66.667 0.00 0.00 0.00 5.18
702 715 3.009723 GGTGACTCTCTCTCTCTCTGTG 58.990 54.545 0.00 0.00 0.00 3.66
703 716 2.354704 CGGTGACTCTCTCTCTCTCTGT 60.355 54.545 0.00 0.00 0.00 3.41
803 816 4.250431 GTGTGGTGTGGTGTGCGC 62.250 66.667 0.00 0.00 0.00 6.09
913 927 1.136305 TCGGAATGGAGTTAGAAGGCG 59.864 52.381 0.00 0.00 0.00 5.52
927 946 3.697045 TCGGTGGCATTTAAAATCGGAAT 59.303 39.130 0.00 0.00 0.00 3.01
1685 1735 7.484975 CCCCTGTAACATTTATTATGCGAAAA 58.515 34.615 0.00 0.00 0.00 2.29
1686 1736 6.460399 GCCCCTGTAACATTTATTATGCGAAA 60.460 38.462 0.00 0.00 0.00 3.46
1710 1760 8.306680 TCACTAATGACAACTACAGTTTAAGC 57.693 34.615 0.00 0.00 35.83 3.09
1788 1848 9.122779 GGCGTGATAAATAGATATCCTAGTAGT 57.877 37.037 0.00 0.00 32.39 2.73
1847 1907 6.287589 AGACTACCCACTTCAATTCTACAG 57.712 41.667 0.00 0.00 0.00 2.74
1848 1908 6.497259 AGAAGACTACCCACTTCAATTCTACA 59.503 38.462 0.00 0.00 43.13 2.74
1849 1909 6.814146 CAGAAGACTACCCACTTCAATTCTAC 59.186 42.308 0.00 0.00 43.13 2.59
1884 1946 2.624838 ACAACAGGAAACAGAATGCCAG 59.375 45.455 0.00 0.00 42.53 4.85
1923 1985 1.444250 GATGTTATCCCCGCGGTGA 59.556 57.895 26.12 20.42 0.00 4.02
1971 2033 4.961730 TCCATGACCCCAATAATTTTCCTG 59.038 41.667 0.00 0.00 0.00 3.86
2046 2108 9.990360 TGCTTCATACTTAATACGATTAATCCA 57.010 29.630 9.87 0.00 0.00 3.41
2075 2154 2.103771 TCTCTCAGCTTGGGCATGTATC 59.896 50.000 0.00 0.00 41.70 2.24
2335 2415 6.245408 TGGGAAGTTGCAAAGTAACATATCT 58.755 36.000 0.00 0.00 0.00 1.98
2682 2763 5.702670 CAGTATCCACATCACTTGAACAACT 59.297 40.000 0.00 0.00 0.00 3.16
2690 2771 5.888161 GGAAATTCCAGTATCCACATCACTT 59.112 40.000 7.23 0.00 36.28 3.16
2955 3037 2.158885 TCATGGGATAAATTGTCGCGGA 60.159 45.455 6.13 0.00 0.00 5.54
2957 3039 2.872245 AGTCATGGGATAAATTGTCGCG 59.128 45.455 0.00 0.00 0.00 5.87
3282 3371 8.594881 AGGCTATATTAAAACAAGATGTCTCG 57.405 34.615 0.00 0.00 0.00 4.04
3459 3555 6.201044 CCTAAAACTACATATGGAGCTTGTCG 59.799 42.308 15.30 1.93 0.00 4.35
4006 4210 3.354397 CAATATCTGCTTTCGCCGAAAC 58.646 45.455 8.43 6.69 33.03 2.78
4041 4245 4.288366 TGTGAGTATGGAGGAAATGTGGAA 59.712 41.667 0.00 0.00 0.00 3.53
4050 4254 2.044492 ACTTCCCTGTGAGTATGGAGGA 59.956 50.000 0.00 0.00 0.00 3.71
4819 5046 5.539193 AGGAACGGAGGGAGTATTATACAAG 59.461 44.000 5.11 0.00 0.00 3.16
4830 5057 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4831 5058 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4832 5059 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4833 5060 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
4861 5088 8.969267 CGTATGTGGTAGTCTATTTGAAATCTC 58.031 37.037 0.00 0.00 0.00 2.75
4862 5089 7.926555 CCGTATGTGGTAGTCTATTTGAAATCT 59.073 37.037 0.00 0.00 0.00 2.40
4863 5090 7.924412 TCCGTATGTGGTAGTCTATTTGAAATC 59.076 37.037 0.00 0.00 0.00 2.17
4864 5091 7.788026 TCCGTATGTGGTAGTCTATTTGAAAT 58.212 34.615 0.00 0.00 0.00 2.17
4865 5092 7.172868 TCCGTATGTGGTAGTCTATTTGAAA 57.827 36.000 0.00 0.00 0.00 2.69
4866 5093 6.778834 TCCGTATGTGGTAGTCTATTTGAA 57.221 37.500 0.00 0.00 0.00 2.69
4867 5094 6.322969 ACATCCGTATGTGGTAGTCTATTTGA 59.677 38.462 0.00 0.00 44.79 2.69
4868 5095 6.513180 ACATCCGTATGTGGTAGTCTATTTG 58.487 40.000 0.00 0.00 44.79 2.32
4869 5096 6.726490 ACATCCGTATGTGGTAGTCTATTT 57.274 37.500 0.00 0.00 44.79 1.40
4870 5097 9.696572 ATATACATCCGTATGTGGTAGTCTATT 57.303 33.333 3.56 0.00 45.99 1.73
4872 5099 9.828039 CTATATACATCCGTATGTGGTAGTCTA 57.172 37.037 3.56 0.00 45.99 2.59
4873 5100 8.546322 TCTATATACATCCGTATGTGGTAGTCT 58.454 37.037 3.56 0.00 45.99 3.24
4874 5101 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
4875 5102 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
4876 5103 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
4878 5105 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
4911 5138 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
4912 5139 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
4913 5140 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
4914 5141 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
4915 5142 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
4916 5143 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
4917 5144 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
4918 5145 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
4919 5146 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
4920 5147 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
4921 5148 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
4922 5149 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
4923 5150 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
4924 5151 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
4925 5152 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
4926 5153 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
4927 5154 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
4928 5155 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
4929 5156 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
4930 5157 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
4931 5158 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
4932 5159 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
4933 5160 6.721571 ATTTCAACAAGTGACTACATACGG 57.278 37.500 0.00 0.00 35.39 4.02
4934 5161 9.302345 AGATATTTCAACAAGTGACTACATACG 57.698 33.333 0.00 0.00 35.39 3.06
4943 5170 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
4958 5185 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4959 5186 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4960 5187 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4961 5188 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4962 5189 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
4963 5190 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4964 5191 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4965 5192 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4966 5193 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4967 5194 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
4968 5195 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
4969 5196 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
4970 5197 8.912614 ATATACTCCCTCCGTTCCTAAATATT 57.087 34.615 0.00 0.00 0.00 1.28
4972 5199 9.638176 GATATATACTCCCTCCGTTCCTAAATA 57.362 37.037 0.00 0.00 0.00 1.40
4973 5200 8.345306 AGATATATACTCCCTCCGTTCCTAAAT 58.655 37.037 0.00 0.00 0.00 1.40
4974 5201 7.706674 AGATATATACTCCCTCCGTTCCTAAA 58.293 38.462 0.00 0.00 0.00 1.85
4975 5202 7.281366 AGATATATACTCCCTCCGTTCCTAA 57.719 40.000 0.00 0.00 0.00 2.69
4976 5203 6.905067 AGATATATACTCCCTCCGTTCCTA 57.095 41.667 0.00 0.00 0.00 2.94
4977 5204 5.799978 AGATATATACTCCCTCCGTTCCT 57.200 43.478 0.00 0.00 0.00 3.36
4978 5205 5.394333 GCAAGATATATACTCCCTCCGTTCC 60.394 48.000 0.00 0.00 0.00 3.62
4979 5206 5.185249 TGCAAGATATATACTCCCTCCGTTC 59.815 44.000 0.00 0.00 0.00 3.95
4980 5207 5.084519 TGCAAGATATATACTCCCTCCGTT 58.915 41.667 0.00 0.00 0.00 4.44
4981 5208 4.673968 TGCAAGATATATACTCCCTCCGT 58.326 43.478 0.00 0.00 0.00 4.69
4982 5209 4.950475 TCTGCAAGATATATACTCCCTCCG 59.050 45.833 0.00 0.00 38.67 4.63
5109 5336 8.487313 ACAAACTTAGCGTCATGATATTAACA 57.513 30.769 0.00 0.00 0.00 2.41
5217 5528 3.192422 TGGCAAATAAGAAACATGGGACG 59.808 43.478 0.00 0.00 0.00 4.79
5283 5594 4.161333 CAGATTTTAGCAGACCAAAAGCG 58.839 43.478 0.00 0.00 35.69 4.68
5350 5661 3.226777 TCCACCCACACGAAAAATGATT 58.773 40.909 0.00 0.00 0.00 2.57
5672 5995 6.874664 TCATTGACACAAAATTATTGCTGCAT 59.125 30.769 1.84 0.00 0.00 3.96
5757 6080 9.139174 CAACGAAGCATTTCCAAGTAAAATAAT 57.861 29.630 0.00 0.00 0.00 1.28
5758 6081 8.138712 ACAACGAAGCATTTCCAAGTAAAATAA 58.861 29.630 0.00 0.00 0.00 1.40
5759 6082 7.653647 ACAACGAAGCATTTCCAAGTAAAATA 58.346 30.769 0.00 0.00 0.00 1.40
5760 6083 6.512297 ACAACGAAGCATTTCCAAGTAAAAT 58.488 32.000 0.00 0.00 0.00 1.82
5761 6084 5.897050 ACAACGAAGCATTTCCAAGTAAAA 58.103 33.333 0.00 0.00 0.00 1.52
5765 6088 3.548014 CGAACAACGAAGCATTTCCAAGT 60.548 43.478 0.00 0.00 45.77 3.16
5766 6089 2.973224 CGAACAACGAAGCATTTCCAAG 59.027 45.455 0.00 0.00 45.77 3.61
5767 6090 2.287308 CCGAACAACGAAGCATTTCCAA 60.287 45.455 0.00 0.00 45.77 3.53
5768 6091 1.265635 CCGAACAACGAAGCATTTCCA 59.734 47.619 0.00 0.00 45.77 3.53
5769 6092 1.265905 ACCGAACAACGAAGCATTTCC 59.734 47.619 0.00 0.00 45.77 3.13
5770 6093 2.681152 ACCGAACAACGAAGCATTTC 57.319 45.000 0.00 0.00 45.77 2.17
5780 6106 1.154197 GGGAGCTTGTACCGAACAAC 58.846 55.000 0.00 0.00 43.22 3.32
5787 6113 1.078143 CTGGCTGGGAGCTTGTACC 60.078 63.158 0.00 0.00 41.99 3.34
5812 6138 5.108385 AGAGTTTTTGCTTTGTATCCGTG 57.892 39.130 0.00 0.00 0.00 4.94
5813 6139 5.298276 TCAAGAGTTTTTGCTTTGTATCCGT 59.702 36.000 0.00 0.00 0.00 4.69
5816 6142 9.899226 AATAGTCAAGAGTTTTTGCTTTGTATC 57.101 29.630 0.00 0.00 0.00 2.24
5855 6181 8.297426 CGACAGGAGTAATGCTTATGAATAGTA 58.703 37.037 0.00 0.00 0.00 1.82
5856 6182 7.014326 TCGACAGGAGTAATGCTTATGAATAGT 59.986 37.037 0.00 0.00 0.00 2.12
5862 6188 4.926238 GGATCGACAGGAGTAATGCTTATG 59.074 45.833 0.00 0.00 0.00 1.90
5877 6203 7.818997 AGTAGACAAGTAATATGGATCGACA 57.181 36.000 0.00 0.00 0.00 4.35
5898 6224 8.076910 TCCGACCCATAAAGTTGTATAAAGTA 57.923 34.615 0.00 0.00 0.00 2.24
5899 6225 6.949715 TCCGACCCATAAAGTTGTATAAAGT 58.050 36.000 0.00 0.00 0.00 2.66
5900 6226 6.482308 CCTCCGACCCATAAAGTTGTATAAAG 59.518 42.308 0.00 0.00 0.00 1.85
5901 6227 6.350906 CCTCCGACCCATAAAGTTGTATAAA 58.649 40.000 0.00 0.00 0.00 1.40
5902 6228 5.163280 CCCTCCGACCCATAAAGTTGTATAA 60.163 44.000 0.00 0.00 0.00 0.98
5904 6230 3.135895 CCCTCCGACCCATAAAGTTGTAT 59.864 47.826 0.00 0.00 0.00 2.29
5918 6251 5.334724 TGAAAAGTATTACTCCCTCCGAC 57.665 43.478 0.00 0.00 0.00 4.79
5933 6266 2.801679 CCGCACATGCAAAATGAAAAGT 59.198 40.909 4.49 0.00 42.21 2.66
5950 6283 1.214367 GAAGTTCTTTCGTGTCCGCA 58.786 50.000 0.00 0.00 0.00 5.69
5951 6284 1.214367 TGAAGTTCTTTCGTGTCCGC 58.786 50.000 4.17 0.00 38.71 5.54
5994 6327 1.446618 CTCTGCGCCCATTTTTGCC 60.447 57.895 4.18 0.00 0.00 4.52
5999 6332 0.883833 CAGAAACTCTGCGCCCATTT 59.116 50.000 4.18 0.00 37.72 2.32
6004 6337 0.037790 AGACTCAGAAACTCTGCGCC 60.038 55.000 4.18 0.00 43.95 6.53
6005 6338 1.066914 CAGACTCAGAAACTCTGCGC 58.933 55.000 0.00 0.00 43.95 6.09
6006 6339 2.594321 CTCAGACTCAGAAACTCTGCG 58.406 52.381 0.00 0.00 43.95 5.18
6007 6340 2.029110 AGCTCAGACTCAGAAACTCTGC 60.029 50.000 0.00 0.00 43.95 4.26
6008 6341 3.255395 TGAGCTCAGACTCAGAAACTCTG 59.745 47.826 13.74 0.00 45.59 3.35
6009 6342 3.495331 TGAGCTCAGACTCAGAAACTCT 58.505 45.455 13.74 0.00 41.72 3.24
6010 6343 3.932545 TGAGCTCAGACTCAGAAACTC 57.067 47.619 13.74 0.00 41.72 3.01
6011 6344 4.679373 TTTGAGCTCAGACTCAGAAACT 57.321 40.909 17.43 0.00 46.85 2.66
6012 6345 4.993584 TCATTTGAGCTCAGACTCAGAAAC 59.006 41.667 17.43 0.00 46.85 2.78
6013 6346 5.219343 TCATTTGAGCTCAGACTCAGAAA 57.781 39.130 17.43 6.08 46.85 2.52
6014 6347 4.879197 TCATTTGAGCTCAGACTCAGAA 57.121 40.909 17.43 6.87 46.85 3.02
6015 6348 4.879197 TTCATTTGAGCTCAGACTCAGA 57.121 40.909 17.43 7.76 46.85 3.27
6016 6349 7.606858 TTATTTCATTTGAGCTCAGACTCAG 57.393 36.000 17.43 5.53 46.85 3.35
6017 6350 7.984422 TTTATTTCATTTGAGCTCAGACTCA 57.016 32.000 17.43 0.00 44.84 3.41
6018 6351 9.852091 ATTTTTATTTCATTTGAGCTCAGACTC 57.148 29.630 17.43 0.00 37.19 3.36
6019 6352 9.852091 GATTTTTATTTCATTTGAGCTCAGACT 57.148 29.630 17.43 2.66 0.00 3.24
6020 6353 9.630098 TGATTTTTATTTCATTTGAGCTCAGAC 57.370 29.630 17.43 0.00 0.00 3.51
6063 6396 9.328845 ACAAGCACTTGAAAATTTTGTCATAAT 57.671 25.926 16.95 0.00 42.93 1.28
6064 6397 8.715191 ACAAGCACTTGAAAATTTTGTCATAA 57.285 26.923 16.95 0.00 42.93 1.90
6065 6398 7.978414 TGACAAGCACTTGAAAATTTTGTCATA 59.022 29.630 16.95 0.00 44.42 2.15
6066 6399 6.817641 TGACAAGCACTTGAAAATTTTGTCAT 59.182 30.769 16.95 0.00 44.42 3.06
6067 6400 6.162079 TGACAAGCACTTGAAAATTTTGTCA 58.838 32.000 16.95 9.95 46.01 3.58
6068 6401 6.645700 TGACAAGCACTTGAAAATTTTGTC 57.354 33.333 16.95 7.45 42.93 3.18
6069 6402 6.037391 CCATGACAAGCACTTGAAAATTTTGT 59.963 34.615 16.95 0.00 42.93 2.83
6070 6403 6.037391 ACCATGACAAGCACTTGAAAATTTTG 59.963 34.615 16.95 0.00 42.93 2.44
6071 6404 6.114767 ACCATGACAAGCACTTGAAAATTTT 58.885 32.000 16.95 2.28 42.93 1.82
6072 6405 5.673514 ACCATGACAAGCACTTGAAAATTT 58.326 33.333 16.95 0.00 42.93 1.82
6073 6406 5.280654 ACCATGACAAGCACTTGAAAATT 57.719 34.783 16.95 0.00 42.93 1.82
6074 6407 4.942761 ACCATGACAAGCACTTGAAAAT 57.057 36.364 16.95 4.76 42.93 1.82
6075 6408 5.534278 TGATACCATGACAAGCACTTGAAAA 59.466 36.000 16.95 2.68 42.93 2.29
6076 6409 5.048782 GTGATACCATGACAAGCACTTGAAA 60.049 40.000 16.95 5.02 42.93 2.69
6077 6410 4.455533 GTGATACCATGACAAGCACTTGAA 59.544 41.667 16.95 5.35 42.93 2.69
6078 6411 4.002982 GTGATACCATGACAAGCACTTGA 58.997 43.478 16.95 0.00 42.93 3.02
6079 6412 3.752747 TGTGATACCATGACAAGCACTTG 59.247 43.478 8.82 8.82 45.58 3.16
6080 6413 4.019792 TGTGATACCATGACAAGCACTT 57.980 40.909 0.00 0.00 0.00 3.16
6081 6414 3.701205 TGTGATACCATGACAAGCACT 57.299 42.857 0.00 0.00 0.00 4.40
6082 6415 4.201950 GGAATGTGATACCATGACAAGCAC 60.202 45.833 0.00 0.00 28.22 4.40
6083 6416 3.947196 GGAATGTGATACCATGACAAGCA 59.053 43.478 0.00 0.00 28.22 3.91
6084 6417 4.202441 AGGAATGTGATACCATGACAAGC 58.798 43.478 0.00 0.00 28.22 4.01
6085 6418 6.820335 TCTAGGAATGTGATACCATGACAAG 58.180 40.000 0.00 0.00 28.22 3.16
6086 6419 6.806668 TCTAGGAATGTGATACCATGACAA 57.193 37.500 0.00 0.00 28.22 3.18
6087 6420 6.183361 CCTTCTAGGAATGTGATACCATGACA 60.183 42.308 0.00 0.00 37.67 3.58
6088 6421 6.183361 ACCTTCTAGGAATGTGATACCATGAC 60.183 42.308 0.00 0.00 37.67 3.06
6089 6422 5.905331 ACCTTCTAGGAATGTGATACCATGA 59.095 40.000 0.00 0.00 37.67 3.07
6090 6423 5.994054 CACCTTCTAGGAATGTGATACCATG 59.006 44.000 9.08 0.00 37.67 3.66
6091 6424 5.455326 GCACCTTCTAGGAATGTGATACCAT 60.455 44.000 15.90 0.00 37.67 3.55
6092 6425 4.141711 GCACCTTCTAGGAATGTGATACCA 60.142 45.833 15.90 0.00 37.67 3.25
6093 6426 4.381411 GCACCTTCTAGGAATGTGATACC 58.619 47.826 15.90 0.00 37.67 2.73
6094 6427 4.051922 CGCACCTTCTAGGAATGTGATAC 58.948 47.826 15.90 2.59 37.67 2.24
6095 6428 3.069586 CCGCACCTTCTAGGAATGTGATA 59.930 47.826 15.90 0.00 37.67 2.15
6096 6429 2.158900 CCGCACCTTCTAGGAATGTGAT 60.159 50.000 15.90 0.00 37.67 3.06
6097 6430 1.207089 CCGCACCTTCTAGGAATGTGA 59.793 52.381 15.90 0.00 37.67 3.58
6098 6431 1.656652 CCGCACCTTCTAGGAATGTG 58.343 55.000 9.99 9.99 37.67 3.21
6099 6432 0.107654 GCCGCACCTTCTAGGAATGT 60.108 55.000 0.00 0.00 37.67 2.71
6100 6433 0.107703 TGCCGCACCTTCTAGGAATG 60.108 55.000 0.00 0.00 37.67 2.67
6101 6434 0.618458 TTGCCGCACCTTCTAGGAAT 59.382 50.000 0.00 0.00 37.67 3.01
6102 6435 0.398696 TTTGCCGCACCTTCTAGGAA 59.601 50.000 0.00 0.00 37.67 3.36
6103 6436 0.398696 TTTTGCCGCACCTTCTAGGA 59.601 50.000 0.00 0.00 37.67 2.94
6104 6437 1.243902 TTTTTGCCGCACCTTCTAGG 58.756 50.000 0.00 0.00 42.49 3.02
6122 6455 4.610945 CATTTTCAGAGCACCGACTTTTT 58.389 39.130 0.00 0.00 0.00 1.94
6123 6456 3.550842 GCATTTTCAGAGCACCGACTTTT 60.551 43.478 0.00 0.00 0.00 2.27
6124 6457 2.030805 GCATTTTCAGAGCACCGACTTT 60.031 45.455 0.00 0.00 0.00 2.66
6125 6458 1.537202 GCATTTTCAGAGCACCGACTT 59.463 47.619 0.00 0.00 0.00 3.01
6126 6459 1.160137 GCATTTTCAGAGCACCGACT 58.840 50.000 0.00 0.00 0.00 4.18
6127 6460 1.160137 AGCATTTTCAGAGCACCGAC 58.840 50.000 0.00 0.00 0.00 4.79
6128 6461 2.028112 AGTAGCATTTTCAGAGCACCGA 60.028 45.455 0.00 0.00 0.00 4.69
6129 6462 2.350522 AGTAGCATTTTCAGAGCACCG 58.649 47.619 0.00 0.00 0.00 4.94
6130 6463 4.216257 TGAAAGTAGCATTTTCAGAGCACC 59.784 41.667 6.29 0.00 39.05 5.01
6131 6464 5.362556 TGAAAGTAGCATTTTCAGAGCAC 57.637 39.130 6.29 0.00 39.05 4.40
6132 6465 6.389830 TTTGAAAGTAGCATTTTCAGAGCA 57.610 33.333 9.30 0.00 43.22 4.26
6133 6466 7.596248 TGATTTTGAAAGTAGCATTTTCAGAGC 59.404 33.333 9.30 7.09 43.22 4.09
6134 6467 8.909671 GTGATTTTGAAAGTAGCATTTTCAGAG 58.090 33.333 9.30 0.00 43.22 3.35
6135 6468 8.632679 AGTGATTTTGAAAGTAGCATTTTCAGA 58.367 29.630 9.30 4.38 43.22 3.27
6136 6469 8.807667 AGTGATTTTGAAAGTAGCATTTTCAG 57.192 30.769 9.30 0.00 43.22 3.02
6137 6470 9.598517 AAAGTGATTTTGAAAGTAGCATTTTCA 57.401 25.926 6.29 6.29 41.40 2.69
6152 6485 7.429636 AAATCAATGCTCCAAAGTGATTTTG 57.570 32.000 6.13 0.00 43.09 2.44
6183 6516 3.074675 TCCTATAAGGCGTGGCAAAAA 57.925 42.857 0.00 0.00 34.61 1.94
6184 6517 2.791347 TCCTATAAGGCGTGGCAAAA 57.209 45.000 0.00 0.00 34.61 2.44
6185 6518 2.791347 TTCCTATAAGGCGTGGCAAA 57.209 45.000 0.00 0.00 34.61 3.68
6186 6519 2.092646 ACATTCCTATAAGGCGTGGCAA 60.093 45.455 0.00 0.00 34.61 4.52
6187 6520 1.488812 ACATTCCTATAAGGCGTGGCA 59.511 47.619 0.00 0.00 34.61 4.92
6188 6521 1.873591 CACATTCCTATAAGGCGTGGC 59.126 52.381 0.00 0.00 34.61 5.01
6189 6522 3.469008 TCACATTCCTATAAGGCGTGG 57.531 47.619 8.95 0.00 34.61 4.94
6190 6523 5.597813 GAATCACATTCCTATAAGGCGTG 57.402 43.478 0.00 0.00 34.61 5.34
6202 6535 9.545611 GCAAAAATTTGTTATGGAATCACATTC 57.454 29.630 7.64 0.00 40.24 2.67
6203 6536 9.064706 TGCAAAAATTTGTTATGGAATCACATT 57.935 25.926 7.64 0.00 40.24 2.71
6204 6537 8.618702 TGCAAAAATTTGTTATGGAATCACAT 57.381 26.923 7.64 0.00 40.24 3.21
6205 6538 8.442632 TTGCAAAAATTTGTTATGGAATCACA 57.557 26.923 0.00 0.00 40.24 3.58
6206 6539 7.534918 GCTTGCAAAAATTTGTTATGGAATCAC 59.465 33.333 0.00 0.00 40.24 3.06
6207 6540 7.228108 TGCTTGCAAAAATTTGTTATGGAATCA 59.772 29.630 0.00 0.00 40.24 2.57
6208 6541 7.534918 GTGCTTGCAAAAATTTGTTATGGAATC 59.465 33.333 0.00 0.00 40.24 2.52
6209 6542 7.229106 AGTGCTTGCAAAAATTTGTTATGGAAT 59.771 29.630 0.00 0.00 40.24 3.01
6210 6543 6.541641 AGTGCTTGCAAAAATTTGTTATGGAA 59.458 30.769 0.00 0.00 40.24 3.53
6211 6544 6.054295 AGTGCTTGCAAAAATTTGTTATGGA 58.946 32.000 0.00 0.00 40.24 3.41
6212 6545 6.303021 AGTGCTTGCAAAAATTTGTTATGG 57.697 33.333 0.00 0.00 40.24 2.74
6213 6546 7.408123 TCAAGTGCTTGCAAAAATTTGTTATG 58.592 30.769 0.00 2.24 40.24 1.90
6214 6547 7.551035 TCAAGTGCTTGCAAAAATTTGTTAT 57.449 28.000 0.00 0.00 40.24 1.89
6215 6548 6.974932 TCAAGTGCTTGCAAAAATTTGTTA 57.025 29.167 0.00 0.00 40.24 2.41
6216 6549 5.876612 TCAAGTGCTTGCAAAAATTTGTT 57.123 30.435 0.00 0.00 40.24 2.83
6217 6550 5.876612 TTCAAGTGCTTGCAAAAATTTGT 57.123 30.435 0.00 0.00 40.24 2.83
6218 6551 7.743520 AAATTCAAGTGCTTGCAAAAATTTG 57.256 28.000 15.19 5.36 40.24 2.32
6219 6552 8.760103 AAAAATTCAAGTGCTTGCAAAAATTT 57.240 23.077 0.00 10.30 40.24 1.82
6242 6575 7.498900 TCAAATGAGCTCAGAGAACAGTAAAAA 59.501 33.333 22.96 0.00 0.00 1.94
6243 6576 6.992123 TCAAATGAGCTCAGAGAACAGTAAAA 59.008 34.615 22.96 0.00 0.00 1.52
6244 6577 6.425114 GTCAAATGAGCTCAGAGAACAGTAAA 59.575 38.462 22.96 0.00 0.00 2.01
6245 6578 5.928839 GTCAAATGAGCTCAGAGAACAGTAA 59.071 40.000 22.96 0.00 0.00 2.24
6246 6579 5.244851 AGTCAAATGAGCTCAGAGAACAGTA 59.755 40.000 22.96 0.00 0.00 2.74
6247 6580 4.040217 AGTCAAATGAGCTCAGAGAACAGT 59.960 41.667 22.96 0.00 0.00 3.55
6248 6581 4.567971 AGTCAAATGAGCTCAGAGAACAG 58.432 43.478 22.96 7.54 0.00 3.16
6249 6582 4.282957 AGAGTCAAATGAGCTCAGAGAACA 59.717 41.667 22.96 0.00 0.00 3.18
6250 6583 4.626604 CAGAGTCAAATGAGCTCAGAGAAC 59.373 45.833 22.96 16.49 0.00 3.01
6251 6584 4.525874 TCAGAGTCAAATGAGCTCAGAGAA 59.474 41.667 22.96 5.07 0.00 2.87
6252 6585 4.085009 TCAGAGTCAAATGAGCTCAGAGA 58.915 43.478 22.96 15.91 0.00 3.10
6253 6586 4.426416 CTCAGAGTCAAATGAGCTCAGAG 58.574 47.826 22.96 14.88 36.80 3.35
6254 6587 4.453177 CTCAGAGTCAAATGAGCTCAGA 57.547 45.455 22.96 11.30 36.80 3.27
6260 6593 5.642491 TCAAATGAGCTCAGAGTCAAATGAG 59.358 40.000 22.96 3.99 44.70 2.90
6261 6594 5.554070 TCAAATGAGCTCAGAGTCAAATGA 58.446 37.500 22.96 12.99 0.00 2.57
6262 6595 5.870444 CTCAAATGAGCTCAGAGTCAAATG 58.130 41.667 22.96 11.07 35.13 2.32
6289 6622 3.569200 AAAGTGCCCTTCCGCTCCC 62.569 63.158 0.00 0.00 0.00 4.30
6290 6623 2.034221 AAAGTGCCCTTCCGCTCC 59.966 61.111 0.00 0.00 0.00 4.70
6291 6624 0.249398 TAGAAAGTGCCCTTCCGCTC 59.751 55.000 0.00 0.00 0.00 5.03
6292 6625 0.036294 GTAGAAAGTGCCCTTCCGCT 60.036 55.000 0.00 0.00 0.00 5.52
6293 6626 1.025113 GGTAGAAAGTGCCCTTCCGC 61.025 60.000 0.00 0.00 0.00 5.54
6294 6627 0.613777 AGGTAGAAAGTGCCCTTCCG 59.386 55.000 0.00 0.00 0.00 4.30
6295 6628 1.065345 GGAGGTAGAAAGTGCCCTTCC 60.065 57.143 0.00 0.00 0.00 3.46
6296 6629 1.909986 AGGAGGTAGAAAGTGCCCTTC 59.090 52.381 0.00 0.00 0.00 3.46
6297 6630 1.909986 GAGGAGGTAGAAAGTGCCCTT 59.090 52.381 0.00 0.00 0.00 3.95
6298 6631 1.574263 GAGGAGGTAGAAAGTGCCCT 58.426 55.000 0.00 0.00 0.00 5.19
6299 6632 0.542333 GGAGGAGGTAGAAAGTGCCC 59.458 60.000 0.00 0.00 0.00 5.36
6300 6633 1.208293 CAGGAGGAGGTAGAAAGTGCC 59.792 57.143 0.00 0.00 0.00 5.01
6301 6634 1.903183 ACAGGAGGAGGTAGAAAGTGC 59.097 52.381 0.00 0.00 0.00 4.40
6302 6635 4.601084 TCTACAGGAGGAGGTAGAAAGTG 58.399 47.826 0.00 0.00 42.08 3.16
6303 6636 4.949966 TCTACAGGAGGAGGTAGAAAGT 57.050 45.455 0.00 0.00 42.08 2.66
6304 6637 6.800072 AAATCTACAGGAGGAGGTAGAAAG 57.200 41.667 5.70 0.00 46.37 2.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.